Rmu_sc0008124.1_g000008

Belongs to the PdxS SNZ family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008124.1
OG0000056
Physical Location & Seq
Forward (+)
54716 .. 66247
11532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008124.1_g000008.1.cds

Sequence Viewer

Length: 2661 bp
atggaagagcctcagacttcttcttcttcgtcttcctcctctgcttctccatcttcttctactgatgctgtcatccatagggacactactacttccggcgccggcgcctcgtcttccagcacttcgcaggtccgcgaagaggaggacgatcacaatcagtaccaccaccaccacaatttccggcatccggagccgcaggtcaacgaaatcggaacttcttacagagtaggcttatcgggattcgatgagaccgcgtctgtgattagagatgacacgtggtcctgcatcatcgtcctcctcaccttctggttctttgtatctatgactttgattctgggagtgtacgggtctgagaccttagagcttggccctaatacttcgactcttctgcaacctaactccatatttgtgcagtctataaaggtggaagagctgaatgtatcaaaccctgggcctgtgctatatggtttctatagtgttccaccgcttaatagtgtgacgacttggtcagaaacacacagtgcctctgttccagctgattctcataaggagtggatatattacctaaataaggggtctcaaataagtatatcgtacagcgtttcctctcccagcacgtctatttttcttataattgctgaaggtaaagaaggccttgctcagtggcttgaagagccaacatatcctaatactacattgtcatggaacctcgttcatggaagtggcaagattctgcaggacatatcaacgtctgataattactatatttctgtgggtaacctgaactatgaggatgtggaggtgcaattaaacttcacggtgaatgctttgttgtatgatacaagtgaagcttattacaagtgtaccttcacagatacgtcctgcagtttgaaaatttcgtttcctagtggaaatgttggtgtgttaacatctcctggtccagatcagggtatagacaaccagtatgtaaaactgtcatatggaccaagatgggccacatatattattggtatagtgtacggcaacggcgccatcacagagagcagcagcaacaagtcggcgttcgcagtgaaggtgggcctggcccaaatgctccgcggcggcgtcatcatggacgtcgtgaacgccgagcaggcccggatcgccgaggaggccggggcctgcgcggtgatggcgctggagcgggtcccggctgacatccgggcccagggcggcgtggcccgcatgtccgacccgcagctcatcaaggagattaagcaggccgtcaccatacccgtcatggccaaggcccggattggccacttcgtcgaggcccagattctcgaggccatcggcgtcgattacgtcgacgagagcgaggtcctcactctcgccgacgaggataaccacataaacaagcacaacttccagattccgttcgtctgcggctgccggaacctcggcgaggcgctccggcggatccgggagggcgcggcgatgatccggaccaagggcgaggccggcaccgggaacgtcatcgaggccgtcaggcacgtccggtcggtgatgggggacattagggttttgaggaacatggacgacgacgaggtcttcacctttgcgaagaagatcgcggcgccgtacgatttggtgatgcagaccaagcagctcgggaggctgccggtggtgcacttcgccgccgggggagtggcgacgccagccgacgcggcgctgatgatgcagctggggatggatggggtttttgtcgggtcgggtgtgttcaagagcggtgacccggtgaagcggggcagggcgattgtgcaggctgtgacccattacaatgacccgaatatactcgctgatgttagctgtggattgggtgaggctatggttgggctcaacttgaatgatgccaaggtcgaaagaagacccaatgcacaccaagaaccacagtttcccactacacacgggaaagtcaagactaagcatgcctgtggtggagccttacacgggaatccatgtgcggcactcggccgcagtttatgccccccggtcgggagggagagggaagaagagtttgcgatctcagtcaagttctacaagccatgctatatccgacgttcgctgtccgatccaccccatattgaacggagcctcataacacatgtggttgtgttgctccctttcttcatggtcaagcaaaaacgtcatgagtcattttatagagggatgatgaagcagtatctttcggatataggtgtctctgaaactctacatacagagattctcgataagttgttccaggtgattgaagctgccgagacctacgaggtgcctattcttttggtcatattcgagagtactcaccggagggatagtgatgagatcttgagtttcactcctacagctgaatctgcaatcgagggtttggagaaagtgagacttgatgctgccattattggacaatcaccgacgtgtgctatatgttggaaggattttgcacccgaagatgttggtcaactgatggttactcgcatgccctgctcacactgttatcacggagattgcattgtccactggctgagcattaatcatcgatgtcccatgtgccgattcccgatgccagtggacacccagccatcatcatcatcatcgaatccccagagtcctcctcctaattaa

Protein Analysis

886

Amino Acids

97.05

Weight (kDa)

5.5

Isoelectric Point (pI)

49.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 632
AasI GACNNNNNNGTC 2 cut(s) 505, 1586
AatII GACGTC 1 cut(s) 1119
Acc36I ACCTGC 2 cut(s) 118, 187
AccB1I GGYRCC 6 cut(s) 98, 104, 1028, 1502, 1615, 2311
AccBSI CCGCTC 2 cut(s) 1183, 1767
AccI GTMKAC 1 cut(s) 1347
AccII CGCG 7 cut(s) 135, 254, 1098, 1166, 1472, 1613, 1706
AccIII TCCGGA 2 cut(s) 187, 1482
AclWI GGATC 5 cut(s) 1148, 1453, 1466, 1474, 2105
AcoI YGGCCR 3 cut(s) 1281, 1297, 2011
AcsI RAATTY 1 cut(s) 894
AcuI CTGAAG 1 cut(s) 660
AcvI CACGTG 1 cut(s) 276
AcyI GRCGYC 8 cut(s) 99, 105, 1029, 1104, 1116, 1335, 1616, 1694
AdeI CACNNNGTG 1 cut(s) 521
AfaI GTAC 7 cut(s) 161, 344, 596, 865, 1019, 1622, 2341
AflIII ACRYGT 3 cut(s) 273, 2143, 2453
AgsI TTSAA 6 cut(s) 671, 892, 1762, 1885, 2126, 2291
AhdI GACNNNNNGTC 1 cut(s) 277
AjiI CACGTC 3 cut(s) 618, 1534, 2454
AjnI CCWGG 5 cut(s) 448, 934, 1080, 1206, 2280
AleI CACNNNNGTG 1 cut(s) 2452
Alw21I GWGCWC 1 cut(s) 1671
Alw26I GTCTC 6 cut(s) 242, 347, 582, 2245, 2294, 2413
Alw44I GTGCAC 1 cut(s) 1667
AlwI GGATC 5 cut(s) 1148, 1453, 1466, 1474, 2105
Ama87I CYCGRG 2 cut(s) 1322, 1649
Aor13HI TCCGGA 2 cut(s) 187, 1482
ApaI GGGCCC 1 cut(s) 1207
ApaLI GTGCAC 1 cut(s) 1667
ApeKI GCWGC 9 cut(s) 1044, 1047, 1237, 1428, 1645, 1657, 1720, 2294, 2429
ApoI RAATTY 1 cut(s) 894
AseI ATTAAT 1 cut(s) 2568
AspLEI GCGC 9 cut(s) 101, 107, 1031, 1166, 1177, 1450, 1472, 1618, 1711
AvaI CYCGRG 2 cut(s) 1322, 1649
AvaII GGWCC 7 cut(s) 130, 279, 938, 983, 1186, 1360, 1485
BaeGI GKGCMC 2 cut(s) 1207, 1671
BaeI ACNNNNGTAYC 2 cut(s) 847, 880
BalI TGGCCA 2 cut(s) 1283, 1299
BamHI GGATCC 1 cut(s) 1458
BanI GGYRCC 6 cut(s) 98, 104, 1028, 1502, 1615, 2311
BanII GRGCYC 2 cut(s) 1207, 1878
BbrPI CACGTG 1 cut(s) 276
BbsI GAAGAC 4 cut(s) 24, 105, 1582, 1912
Bbv12I GWGCWC 1 cut(s) 1671
BbvI GCAGC 9 cut(s) 1056, 1059, 1249, 1415, 1644, 1657, 1732, 2281, 2416
BceAI ACGGC 5 cut(s) 1036, 1042, 1247, 1508, 1603
BcgI CGANNNNNNTGC 2 cut(s) 370, 404
BciT130I CCWGG 5 cut(s) 450, 936, 1082, 1208, 2282
BcoDI GTCTC 6 cut(s) 242, 347, 582, 2245, 2294, 2413
BfaI CTAG 1 cut(s) 906
BfmI CTRYAG 4 cut(s) 472, 734, 883, 2382
BfoI RGCGCY 7 cut(s) 102, 108, 1032, 1178, 1451, 1619, 1712
BfuAI ACCTGC 2 cut(s) 118, 187
BglI GCCNNNNNGGC 3 cut(s) 1133, 1151, 1706
BglII AGATCT 1 cut(s) 2364
BlpI GCTNAGC 1 cut(s) 2561
BmcAI AGTACT 1 cut(s) 2341
Bme18I GGWCC 7 cut(s) 130, 279, 938, 983, 1186, 1360, 1485
BmeRI GACNNNNNGTC 1 cut(s) 277
BmeT110I CYCGRG 2 cut(s) 1322, 1649
BmgBI CACGTC 3 cut(s) 618, 1534, 2454
BmsI GCATC 8 cut(s) 55, 193, 294, 1623, 1707, 1879, 2416, 2589
BpiI GAAGAC 4 cut(s) 24, 105, 1582, 1912
BplI GAGNNNNNCTC 3 cut(s) 2362, 2394, 2635
BpmI CTGGAG 1 cut(s) 1199
Bpu1102I GCTNAGC 1 cut(s) 2561
BpuEI CTTGAG 1 cut(s) 2389
Bsa29I ATCGAT 1 cut(s) 2575
BsaAI YACGTR 1 cut(s) 276
BsaBI GATNNNNATC 1 cut(s) 153
BsaHI GRCGYC 8 cut(s) 99, 105, 1029, 1104, 1116, 1335, 1616, 1694
BsaI GGTCTC 4 cut(s) 242, 347, 582, 2294
BsaWI WCCGGW 4 cut(s) 187, 1482, 1536, 2346
BsaXI ACNNNNNCTCC 2 cut(s) 2341, 2371
Bse118I RCCGGY 3 cut(s) 101, 1499, 1660
Bse1I ACTGG 3 cut(s) 961, 2561, 2603
Bse8I GATNNNNATC 1 cut(s) 153
BseAI TCCGGA 2 cut(s) 187, 1482
BseBI CCWGG 5 cut(s) 450, 936, 1082, 1208, 2282
BseCI ATCGAT 1 cut(s) 2575
BseGI GGATG 7 cut(s) 72, 184, 799, 1197, 1734, 1738, 2214
BseJI GATNNNNATC 1 cut(s) 153
BseMII CTCAG 5 cut(s) 26, 342, 674, 2079, 2552
BseNI ACTGG 3 cut(s) 961, 2561, 2603
BseRI GAGGAG 5 cut(s) 28, 155, 287, 1163, 2640
BseSI GKGCMC 2 cut(s) 1207, 1671
BseX3I CGGCCG 1 cut(s) 2011
BseXI GCAGC 9 cut(s) 1056, 1059, 1249, 1415, 1644, 1657, 1732, 2281, 2416
BseYI CCCAGC 3 cut(s) 611, 1723, 2613
BsgI GTGCAG 2 cut(s) 431, 1820
Bsh1236I CGCG 7 cut(s) 135, 254, 1098, 1166, 1472, 1613, 1706
Bsh1285I CGRYCG 3 cut(s) 1541, 2014, 2034
BshNI GGYRCC 6 cut(s) 98, 104, 1028, 1502, 1615, 2311
BshVI ATCGAT 1 cut(s) 2575
BsiEI CGRYCG 3 cut(s) 1541, 2014, 2034
BsiHKAI GWGCWC 1 cut(s) 1671
BsiHKCI CYCGRG 2 cut(s) 1322, 1649
BsiWI CGTACG 1 cut(s) 1620
BslFI GGGAC 4 cut(s) 95, 1172, 1565, 2565
BsmAI GTCTC 6 cut(s) 242, 347, 582, 2245, 2294, 2413
BsmFI GGGAC 4 cut(s) 95, 1172, 1565, 2565
BsmI GAATGC 1 cut(s) 829
Bso31I GGTCTC 4 cut(s) 242, 347, 582, 2294
BsoBI CYCGRG 2 cut(s) 1322, 1649
Bsp120I GGGCCC 1 cut(s) 1203
Bsp1286I GDGCHC 3 cut(s) 1207, 1671, 1878
Bsp13I TCCGGA 2 cut(s) 187, 1482
Bsp143I GATC 9 cut(s) 148, 943, 1140, 1458, 1479, 1608, 2061, 2110, 2364
Bsp1720I GCTNAGC 1 cut(s) 2561
BspCNI CTCAG 5 cut(s) 25, 343, 673, 2078, 2553
BspDI ATCGAT 1 cut(s) 2575
BspEI TCCGGA 2 cut(s) 187, 1482
BspFNI CGCG 7 cut(s) 135, 254, 1098, 1166, 1472, 1613, 1706
BspHI TCATGA 1 cut(s) 2188
BspMAI CTGCAG 2 cut(s) 738, 887
BspMI ACCTGC 2 cut(s) 118, 187
BspPI GGATC 5 cut(s) 1148, 1453, 1466, 1474, 2105
BspQI GCTCTTC 2 cut(s) 423, 666
BspT107I GGYRCC 6 cut(s) 98, 104, 1028, 1502, 1615, 2311
BspTNI GGTCTC 4 cut(s) 242, 347, 582, 2294
BsrBI CCGCTC 2 cut(s) 1183, 1767
BsrFI RCCGGY 3 cut(s) 101, 1499, 1660
BsrI ACTGG 3 cut(s) 961, 2561, 2603
BssAI RCCGGY 3 cut(s) 101, 1499, 1660
BssMI GATC 9 cut(s) 148, 943, 1140, 1458, 1479, 1608, 2061, 2110, 2364
BssNI GRCGYC 8 cut(s) 99, 105, 1029, 1104, 1116, 1335, 1616, 1694
BssT1I CCWWGG 3 cut(s) 1284, 1488, 1893
Bst2UI CCWGG 5 cut(s) 450, 936, 1082, 1208, 2282
Bst4CI ACNGT 5 cut(s) 521, 820, 975, 1932, 2531
Bst6I CTCTTC 5 cut(s) 132, 390, 423, 666, 2046
BstACI GRCGYC 8 cut(s) 99, 105, 1029, 1104, 1116, 1335, 1616, 1694
BstAPI GCANNNNNTGC 2 cut(s) 2022, 2520
BstBAI YACGTR 1 cut(s) 276
BstDEI CTNAG 7 cut(s) 12, 351, 358, 660, 1962, 2065, 2561
BstDSI CCRYGG 1 cut(s) 1096
BstEII GGTNACC 2 cut(s) 776, 1769
BstENI CCTNNNNNAGG 2 cut(s) 569, 1442
BstF5I GGATG 7 cut(s) 72, 184, 799, 1197, 1734, 1738, 2214
BstFNI CGCG 7 cut(s) 135, 254, 1098, 1166, 1472, 1613, 1706
BstH2I RGCGCY 7 cut(s) 102, 108, 1032, 1178, 1451, 1619, 1712
BstHHI GCGC 9 cut(s) 101, 107, 1031, 1166, 1177, 1450, 1472, 1618, 1711
BstKTI GATC 9 cut(s) 151, 946, 1143, 1461, 1482, 1611, 2064, 2113, 2367
BstMAI GTCTC 6 cut(s) 242, 347, 582, 2245, 2294, 2413
BstMBI GATC 9 cut(s) 148, 943, 1140, 1458, 1479, 1608, 2061, 2110, 2364
BstMCI CGRYCG 3 cut(s) 1541, 2014, 2034
BstNI CCWGG 5 cut(s) 450, 936, 1082, 1208, 2282
BstNSI RCATGY 4 cut(s) 1228, 1970, 2147, 2518
BstPI GGTNACC 2 cut(s) 776, 1769
BstSFI CTRYAG 4 cut(s) 472, 734, 883, 2382
BstSLI GKGCMC 2 cut(s) 1207, 1671
BstUI CGCG 7 cut(s) 135, 254, 1098, 1166, 1472, 1613, 1706
BstV1I GCAGC 9 cut(s) 1056, 1059, 1249, 1415, 1644, 1657, 1732, 2281, 2416
BstV2I GAAGAC 4 cut(s) 24, 105, 1582, 1912
BstX2I RGATCY 2 cut(s) 1458, 2364
BstYI RGATCY 2 cut(s) 1458, 2364
BstZI CGGCCG 1 cut(s) 2011
Bsu15I ATCGAT 1 cut(s) 2575
BsuTUI ATCGAT 1 cut(s) 2575
BtgI CCRYGG 1 cut(s) 1096
BtgZI GCGATG 1 cut(s) 1490
BtrI CACGTC 3 cut(s) 618, 1534, 2454
BtsCI GGATG 7 cut(s) 72, 184, 799, 1197, 1734, 1738, 2214
BtsI GCAGTG 1 cut(s) 1074
BtsIMutI CAGTG 6 cut(s) 526, 668, 1074, 2527, 2554, 2610
BveI ACCTGC 2 cut(s) 118, 187
CciI TCATGA 1 cut(s) 2188
CfoI GCGC 9 cut(s) 101, 107, 1031, 1166, 1177, 1450, 1472, 1618, 1711
Cfr10I RCCGGY 3 cut(s) 101, 1499, 1660
Cfr42I CCGCGG 1 cut(s) 1099
ClaI ATCGAT 1 cut(s) 2575
CseI GACGC 5 cut(s) 243, 1093, 1324, 1702, 1712
Csp6I GTAC 7 cut(s) 160, 343, 595, 864, 1018, 1621, 2340
CviQI GTAC 7 cut(s) 160, 343, 595, 864, 1018, 1621, 2340
DdeI CTNAG 7 cut(s) 12, 351, 358, 660, 1962, 2065, 2561
DinI GGCGCC 4 cut(s) 100, 106, 1030, 1617
DpnI GATC 9 cut(s) 150, 945, 1142, 1460, 1481, 1610, 2063, 2112, 2366
DpnII GATC 9 cut(s) 148, 943, 1140, 1458, 1479, 1608, 2061, 2110, 2364
DraIII CACNNNGTG 1 cut(s) 521
DrdI GACNNNNNNGTC 2 cut(s) 505, 1586
DriI GACNNNNNGTC 1 cut(s) 277
DseDI GACNNNNNNGTC 2 cut(s) 505, 1586
EaeI YGGCCR 3 cut(s) 1281, 1297, 2011
EagI CGGCCG 1 cut(s) 2011
Eam1104I CTCTTC 5 cut(s) 132, 390, 423, 666, 2046
Eam1105I GACNNNNNGTC 1 cut(s) 277
EarI CTCTTC 5 cut(s) 132, 390, 423, 666, 2046
EciI GGCGGA 1 cut(s) 1471
EclXI CGGCCG 1 cut(s) 2011
Eco130I CCWWGG 3 cut(s) 1284, 1488, 1893
Eco147I AGGCCT 1 cut(s) 654
Eco24I GRGCYC 2 cut(s) 1207, 1878
Eco31I GGTCTC 4 cut(s) 242, 347, 582, 2294
Eco47I GGWCC 7 cut(s) 130, 279, 938, 983, 1186, 1360, 1485
Eco52I CGGCCG 1 cut(s) 2011
Eco57I CTGAAG 1 cut(s) 660
Eco72I CACGTG 1 cut(s) 276
Eco88I CYCGRG 2 cut(s) 1322, 1649
Eco91I GGTNACC 2 cut(s) 776, 1769
EcoNI CCTNNNNNAGG 2 cut(s) 569, 1442
EcoO109I RGGNCCY 3 cut(s) 1158, 1186, 1360
EcoO65I GGTNACC 2 cut(s) 776, 1769
EcoRII CCWGG 5 cut(s) 448, 934, 1080, 1206, 2280
EcoT14I CCWWGG 3 cut(s) 1284, 1488, 1893
EcoT38I GRGCYC 2 cut(s) 1207, 1878
EgeI GGCGCC 4 cut(s) 100, 106, 1030, 1617
EheI GGCGCC 4 cut(s) 100, 106, 1030, 1617
ErhI CCWWGG 3 cut(s) 1284, 1488, 1893
FaqI GGGAC 4 cut(s) 95, 1172, 1565, 2565
FauI CCCGC 4 cut(s) 1176, 1229, 1242, 1776
FauNDI CATATG 1 cut(s) 979
FblI GTMKAC 1 cut(s) 1347
FokI GGATG 7 cut(s) 59, 171, 806, 1184, 1741, 1745, 2221
FriOI GRGCYC 2 cut(s) 1207, 1878
FspBI CTAG 1 cut(s) 906
GlaI GCGC 9 cut(s) 100, 106, 1030, 1165, 1176, 1449, 1471, 1617, 1710
GsaI CCCAGC 3 cut(s) 615, 1727, 2617
GsuI CTGGAG 1 cut(s) 1199
HaeII RGCGCY 7 cut(s) 102, 108, 1032, 1178, 1451, 1619, 1712
HgaI GACGC 5 cut(s) 243, 1093, 1324, 1702, 1712
HhaI GCGC 9 cut(s) 101, 107, 1031, 1166, 1177, 1450, 1472, 1618, 1711
Hin1I GRCGYC 8 cut(s) 99, 105, 1029, 1104, 1116, 1335, 1616, 1694
Hin6I GCGC 9 cut(s) 99, 105, 1029, 1164, 1175, 1448, 1470, 1616, 1709
HinP1I GCGC 9 cut(s) 99, 105, 1029, 1164, 1175, 1448, 1470, 1616, 1709
HincII GTYRAC 4 cut(s) 202, 927, 1348, 2498
HindII GTYRAC 4 cut(s) 202, 927, 1348, 2498
HindIII AAGCTT 1 cut(s) 849
HpaI GTTAAC 1 cut(s) 927
HpyAV CCTTC 6 cut(s) 313, 635, 644, 877, 1066, 2464
HpyCH4III ACNGT 5 cut(s) 521, 820, 975, 1932, 2531
HpyF3I CTNAG 7 cut(s) 12, 351, 358, 660, 1962, 2065, 2561
Hsp92I GRCGYC 8 cut(s) 99, 105, 1029, 1104, 1116, 1335, 1616, 1694
HspAI GCGC 9 cut(s) 99, 105, 1029, 1164, 1175, 1448, 1470, 1616, 1709
KasI GGCGCC 4 cut(s) 98, 104, 1028, 1615
KflI GGGWCCC 1 cut(s) 1186
Kpn2I TCCGGA 2 cut(s) 187, 1482
KroI GCCGGC 2 cut(s) 101, 1499
KroNI GCCGGC 2 cut(s) 103, 1501
KspAI GTTAAC 1 cut(s) 927
KspI CCGCGG 1 cut(s) 1099
Kzo9I GATC 9 cut(s) 148, 943, 1140, 1458, 1479, 1608, 2061, 2110, 2364
LguI GCTCTTC 2 cut(s) 423, 666
LmnI GCTCC 7 cut(s) 190, 1098, 1180, 1455, 1979, 2130, 2163
Lsp1109I GCAGC 9 cut(s) 1056, 1059, 1249, 1415, 1644, 1657, 1732, 2281, 2416
LweI GCATC 8 cut(s) 55, 193, 294, 1623, 1707, 1879, 2416, 2589
MaeI CTAG 1 cut(s) 906
MaeIII GTNAC 6 cut(s) 496, 776, 1264, 1769, 1807, 2506
MalI GATC 9 cut(s) 150, 945, 1142, 1460, 1481, 1610, 2063, 2112, 2366
MbiI CCGCTC 2 cut(s) 1183, 1767
MboI GATC 9 cut(s) 148, 943, 1140, 1458, 1479, 1608, 2061, 2110, 2364
MflI RGATCY 2 cut(s) 1458, 2364
MhlI GDGCHC 3 cut(s) 1207, 1671, 1878
MlsI TGGCCA 2 cut(s) 1283, 1299
MluCI AATT 6 cut(s) 175, 633, 757, 806, 894, 2656
MluNI TGGCCA 2 cut(s) 1283, 1299
Mly113I GGCGCC 4 cut(s) 99, 105, 1029, 1616
MlyI GAGTC 3 cut(s) 376, 2201, 2653
MmeI TCCRAC 3 cut(s) 1254, 2119, 2447
Mox20I TGGCCA 2 cut(s) 1283, 1299
MreI CGCCGGCG 1 cut(s) 101
MroI TCCGGA 2 cut(s) 187, 1482
MroNI GCCGGC 2 cut(s) 101, 1499
MscI TGGCCA 2 cut(s) 1283, 1299
MseI TTAA 6 cut(s) 489, 809, 926, 1254, 2568, 2659
MslI CAYNNNNRTG 6 cut(s) 407, 700, 720, 1818, 1971, 2452
Msp20I TGGCCA 2 cut(s) 1283, 1299
MspA1I CMGCKG 4 cut(s) 536, 1098, 1723, 2387
Mva1269I GAATGC 1 cut(s) 829
MvaI CCWGG 5 cut(s) 450, 936, 1082, 1208, 2282
MvnI CGCG 7 cut(s) 135, 254, 1098, 1166, 1472, 1613, 1706
NaeI GCCGGC 2 cut(s) 103, 1501
NarI GGCGCC 4 cut(s) 99, 105, 1029, 1616
NdeI CATATG 1 cut(s) 979
NdeII GATC 9 cut(s) 148, 943, 1140, 1458, 1479, 1608, 2061, 2110, 2364
NgoMIV GCCGGC 2 cut(s) 101, 1499
NmeAIII GCCGAG 5 cut(s) 1153, 1171, 1419, 1989, 2323
NmuCI GTSAC 4 cut(s) 496, 1264, 1769, 1807
NspI RCATGY 4 cut(s) 1228, 1970, 2147, 2518
OliI CACNNNNGTG 1 cut(s) 2452
PaeI GCATGC 2 cut(s) 1970, 2518
PaeR7I CTCGAG 1 cut(s) 1322
PagI TCATGA 1 cut(s) 2188
PasI CCCWGGG 2 cut(s) 449, 1207
PceI AGGCCT 1 cut(s) 654
PciI ACATGT 1 cut(s) 2143
PciSI GCTCTTC 2 cut(s) 423, 666
PcsI WCGNNNNNNNCGW 3 cut(s) 1125, 1344, 1353
PctI GAATGC 1 cut(s) 829
PdiI GCCGGC 2 cut(s) 103, 1501
Pfl23II CGTACG 1 cut(s) 1620
PflFI GACNNNGTC 3 cut(s) 253, 505, 1586
PfoI TCCNGGA 1 cut(s) 1461
PleI GAGTC 3 cut(s) 376, 2200, 2652
PluTI GGCGCC 4 cut(s) 102, 108, 1032, 1619
PmaCI CACGTG 1 cut(s) 276
PmlI CACGTG 1 cut(s) 276
PpsI GAGTC 3 cut(s) 376, 2200, 2652
Ppu21I YACGTR 1 cut(s) 276
PpuMI RGGWCCY 2 cut(s) 1186, 1360
PscI ACATGT 1 cut(s) 2143
PshBI ATTAAT 1 cut(s) 2568
PsiI TTATAA 1 cut(s) 632
Psp5II RGGWCCY 2 cut(s) 1186, 1360
Psp6I CCWGG 5 cut(s) 448, 934, 1080, 1206, 2280
PspCI CACGTG 1 cut(s) 276
PspEI GGTNACC 2 cut(s) 776, 1769
PspFI CCCAGC 3 cut(s) 611, 1723, 2613
PspGI CCWGG 5 cut(s) 448, 934, 1080, 1206, 2280
PspLI CGTACG 1 cut(s) 1620
PspOMI GGGCCC 1 cut(s) 1203
PspPPI RGGWCCY 2 cut(s) 1186, 1360
PstI CTGCAG 2 cut(s) 738, 887
PsuI RGATCY 2 cut(s) 1458, 2364
PsyI GACNNNGTC 3 cut(s) 253, 505, 1586
PvuII CAGCTG 3 cut(s) 536, 1723, 2387
RsaI GTAC 7 cut(s) 161, 344, 596, 865, 1019, 1622, 2341
RsaNI GTAC 7 cut(s) 160, 343, 595, 864, 1018, 1621, 2340
RseI CAYNNNNRTG 6 cut(s) 407, 700, 720, 1818, 1971, 2452
SacII CCGCGG 1 cut(s) 1099
SalI GTCGAC 1 cut(s) 1346
SapI GCTCTTC 2 cut(s) 423, 666
SaqAI TTAA 6 cut(s) 489, 809, 926, 1254, 2568, 2659
Sau3AI GATC 9 cut(s) 148, 943, 1140, 1458, 1479, 1608, 2061, 2110, 2364
ScaI AGTACT 1 cut(s) 2341
SchI GAGTC 3 cut(s) 376, 2201, 2653
SduI GDGCHC 3 cut(s) 1207, 1671, 1878
SfaNI GCATC 8 cut(s) 55, 193, 294, 1623, 1707, 1879, 2416, 2589
SfcI CTRYAG 4 cut(s) 472, 734, 883, 2382
SfoI GGCGCC 4 cut(s) 100, 106, 1030, 1617
Sfr274I CTCGAG 1 cut(s) 1322
Sfr303I CCGCGG 1 cut(s) 1099
SgrAI CRCCGGYG 1 cut(s) 101
SgrBI CCGCGG 1 cut(s) 1099
SgrDI CGTCGACG 1 cut(s) 1346
SinI GGWCC 7 cut(s) 130, 279, 938, 983, 1186, 1360, 1485
SlaI CTCGAG 1 cut(s) 1322
SmiMI CAYNNNNRTG 6 cut(s) 407, 700, 720, 1818, 1971, 2452
SmlI CTYRAG 2 cut(s) 1322, 2368
SmoI CTYRAG 2 cut(s) 1322, 2368
SphI GCATGC 2 cut(s) 1970, 2518
Sse9I AATT 6 cut(s) 175, 633, 757, 806, 894, 2656
SseBI AGGCCT 1 cut(s) 654
SspDI GGCGCC 4 cut(s) 98, 104, 1028, 1615
SspMI CTAG 1 cut(s) 906
StuI AGGCCT 1 cut(s) 654
StyI CCWWGG 3 cut(s) 1284, 1488, 1893
TaaI ACNGT 5 cut(s) 521, 820, 975, 1932, 2531
TasI AATT 6 cut(s) 175, 633, 757, 806, 894, 2656
TatI WGTACW 1 cut(s) 2339
Tru1I TTAA 6 cut(s) 489, 809, 926, 1254, 2568, 2659
Tru9I TTAA 6 cut(s) 489, 809, 926, 1254, 2568, 2659
TscAI CASTG 6 cut(s) 526, 668, 1074, 2534, 2561, 2610
TseFI GTSAC 4 cut(s) 496, 1264, 1769, 1807
TseI GCWGC 9 cut(s) 1044, 1047, 1237, 1428, 1645, 1657, 1720, 2294, 2429
Tsp45I GTSAC 4 cut(s) 496, 1264, 1769, 1807
TspDTI ATGAA 3 cut(s) 704, 2158, 2228
TspGWI ACGGA 3 cut(s) 1404, 2143, 2553
TspRI CASTG 6 cut(s) 526, 668, 1074, 2534, 2561, 2610
Tth111I GACNNNGTC 3 cut(s) 253, 505, 1586
VneI GTGCAC 1 cut(s) 1667
VpaK11BI GGWCC 7 cut(s) 130, 279, 938, 983, 1186, 1360, 1485
VspI ATTAAT 1 cut(s) 2568
XagI CCTNNNNNAGG 2 cut(s) 569, 1442
XapI RAATTY 1 cut(s) 894
XceI RCATGY 4 cut(s) 1228, 1970, 2147, 2518
XcmI CCANNNNNNNNNTGG 1 cut(s) 1276
XhoI CTCGAG 1 cut(s) 1322
XmiI GTMKAC 1 cut(s) 1347
XspI CTAG 1 cut(s) 906
ZraI GACGTC 1 cut(s) 1117
ZrmI AGTACT 1 cut(s) 2341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.