Rmu_sc0022238.1_g000002

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022238.1
OG0000056
Physical Location & Seq
Reverse (-)
4957 .. 5679
723 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0022238.1_g000002.1.cds

Sequence Viewer

Length: 723 bp
atgtccagtgacgaatggttttttcattacagagtggtgcaaacaagcctaagggaaccgtaccccggcggcgaggtcaagattctgttcaaattgttgttctacagggtaaacttaagcctatccccggggggtgatccagtttatgacagaagtgagtcaaccatcccagtatctcaagcagaattttgggtcaattttggtgagatcaagtcgaataatagagtcgaggagtatagagcgataatggcggattgtctttcaaactttggtgtcccgcaagatgagcatccacatattattgaaaacatattccaggtggttgacgcggccgtcttccccgaccaccctattgttgttggcatatgggacaccacttttcgcagcaggagtagtgatgaagatgaagtatgtagacctaatttcgttccggcagcggaattgtccatccagggtttgcagcaagtgacacttgatagctcggaatttagggaatttgaagcaacaaaatcatcatgtgcaatttgtttggaggattttgcagaacaaggtattgatcaactggtggtggttactagcttgccctgctcacactattatcatggagattgcattgtcaagtggctggagatttgtcatctatgtcccatatgccgatacccaatgccaatagagcaagtgggcgacccatcatcaaatcccttaccccaatcaaggcaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

240

Amino Acids

27.28

Weight (kDa)

4.62

Isoelectric Point (pI)

61.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 332
AccI GTMKAC 1 cut(s) 415
AccII CGCG 1 cut(s) 329
AciI CCGC 5 cut(s) 69, 251, 278, 329, 437
AclWI GGATC 1 cut(s) 131
AcoI YGGCCR 1 cut(s) 330
AcsI RAATTY 3 cut(s) 185, 485, 494
AfaI GTAC 1 cut(s) 62
AfiI CCNNNNNNNGG 3 cut(s) 65, 127, 714
AflII CTTAAG 1 cut(s) 115
AgsI TTSAA 4 cut(s) 91, 264, 305, 500
AjnI CCWGG 2 cut(s) 315, 450
AluBI AGCT 2 cut(s) 480, 579
AluI AGCT 2 cut(s) 480, 579
AlwI GGATC 1 cut(s) 131
Ama87I CYCGRG 1 cut(s) 127
AoxI GGCC 1 cut(s) 330
ApeKI GCWGC 3 cut(s) 384, 434, 460
ApoI RAATTY 3 cut(s) 185, 485, 494
AsuC2I CCSGG 3 cut(s) 66, 128, 129
AsuHPI GGTGA 2 cut(s) 146, 215
AvaI CYCGRG 1 cut(s) 127
AxyI CCTNAGG 1 cut(s) 50
BbsI GAAGAC 1 cut(s) 328
BbvI GCAGC 3 cut(s) 396, 446, 472
BccI CCATC 3 cut(s) 173, 455, 697
BceAI ACGGC 1 cut(s) 317
BciT130I CCWGG 2 cut(s) 317, 452
BclI TGATCA 1 cut(s) 556
BcnI CCSGG 3 cut(s) 66, 128, 129
BfaI CTAG 1 cut(s) 576
BfmI CTRYAG 1 cut(s) 103
BfrI CTTAAG 1 cut(s) 115
BisI GCNGC 5 cut(s) 70, 330, 385, 435, 461
BlsI GCNGC 5 cut(s) 71, 331, 386, 436, 462
Bme1390I CCNGG 5 cut(s) 66, 128, 129, 317, 452
BmeT110I CYCGRG 1 cut(s) 127
BmiI GGNNCC 1 cut(s) 57
BmrFI CCNGG 5 cut(s) 66, 128, 129, 317, 452
BmrI ACTGGG 1 cut(s) 164
BmsI GCATC 1 cut(s) 298
BmuI ACTGGG 1 cut(s) 164
BpiI GAAGAC 1 cut(s) 328
BpmI CTGGAG 1 cut(s) 647
BpuEI CTTGAG 1 cut(s) 162
BpuMI CCSGG 3 cut(s) 66, 128, 129
BsaBI GATNNNNATC 1 cut(s) 288
BsaJI CCNNGG 5 cut(s) 64, 126, 127, 128, 451
Bsc4I CCNNNNNNNGG 3 cut(s) 65, 127, 714
Bse1I ACTGG 4 cut(s) 6, 140, 170, 567
Bse21I CCTNAGG 1 cut(s) 50
Bse8I GATNNNNATC 1 cut(s) 288
BseBI CCWGG 2 cut(s) 317, 452
BseDI CCNNGG 5 cut(s) 64, 126, 127, 128, 451
BseGI GGATG 3 cut(s) 165, 289, 447
BseJI GATNNNNATC 1 cut(s) 288
BseLI CCNNNNNNNGG 3 cut(s) 65, 127, 714
BseNI ACTGG 4 cut(s) 6, 140, 170, 567
BseRI GAGGAG 1 cut(s) 245
BseX3I CGGCCG 1 cut(s) 330
BseXI GCAGC 3 cut(s) 396, 446, 472
Bsh1236I CGCG 1 cut(s) 329
Bsh1285I CGRYCG 1 cut(s) 333
BshFI GGCC 1 cut(s) 332
BsiEI CGRYCG 1 cut(s) 333
BsiHKCI CYCGRG 1 cut(s) 127
BsiSI CCGG 3 cut(s) 66, 128, 431
BslFI GGGAC 3 cut(s) 260, 383, 630
BslI CCNNNNNNNGG 3 cut(s) 65, 127, 714
BsmFI GGGAC 3 cut(s) 260, 383, 630
BsnI GGCC 1 cut(s) 332
BsoBI CYCGRG 1 cut(s) 127
Bsp143I GATC 3 cut(s) 136, 207, 556
BspACI CCGC 5 cut(s) 69, 251, 278, 329, 437
BspANI GGCC 1 cut(s) 332
BspFNI CGCG 1 cut(s) 329
BspLI GGNNCC 1 cut(s) 57
BspPI GGATC 1 cut(s) 131
BspTI CTTAAG 1 cut(s) 115
BsrI ACTGG 4 cut(s) 6, 140, 170, 567
BssECI CCNNGG 5 cut(s) 64, 126, 127, 128, 451
BssMI GATC 3 cut(s) 136, 207, 556
Bst2UI CCWGG 2 cut(s) 317, 452
Bst4CI ACNGT 1 cut(s) 60
BstAFI CTTAAG 1 cut(s) 115
BstC8I GCNNGC 1 cut(s) 581
BstDEI CTNAG 1 cut(s) 50
BstF5I GGATG 3 cut(s) 165, 289, 447
BstFNI CGCG 1 cut(s) 329
BstKTI GATC 3 cut(s) 139, 210, 559
BstMBI GATC 3 cut(s) 136, 207, 556
BstMCI CGRYCG 1 cut(s) 333
BstMWI GCNNNNNNNGC 4 cut(s) 248, 286, 585, 673
BstNI CCWGG 2 cut(s) 317, 452
BstSCI CCNGG 5 cut(s) 64, 126, 127, 315, 450
BstSFI CTRYAG 1 cut(s) 103
BstUI CGCG 1 cut(s) 329
BstV1I GCAGC 3 cut(s) 396, 446, 472
BstV2I GAAGAC 1 cut(s) 328
BstZI CGGCCG 1 cut(s) 330
Bsu36I CCTNAGG 1 cut(s) 50
BsuRI GGCC 1 cut(s) 332
BtsCI GGATG 3 cut(s) 165, 289, 447
BtsIMutI CAGTG 1 cut(s) 13
Cac8I GCNNGC 1 cut(s) 581
Cfr9I CCCGGG 1 cut(s) 127
CseI GACGC 1 cut(s) 335
Csp6I GTAC 1 cut(s) 61
CviAII CATG 2 cut(s) 516, 602
CviJI RGCY 6 cut(s) 48, 120, 332, 480, 579, 625
CviKI_1 RGCY 6 cut(s) 48, 120, 332, 480, 579, 625
CviQI GTAC 1 cut(s) 61
DdeI CTNAG 1 cut(s) 50
DpnI GATC 3 cut(s) 138, 209, 558
DpnII GATC 3 cut(s) 136, 207, 556
DrdI GACNNNNNNGTC 1 cut(s) 332
DseDI GACNNNNNNGTC 1 cut(s) 332
EaeI YGGCCR 1 cut(s) 330
EagI CGGCCG 1 cut(s) 330
EciI GGCGGA 1 cut(s) 266
EclXI CGGCCG 1 cut(s) 330
Eco52I CGGCCG 1 cut(s) 330
Eco81I CCTNAGG 1 cut(s) 50
Eco88I CYCGRG 1 cut(s) 127
EcoRII CCWGG 2 cut(s) 315, 450
FaeI CATG 2 cut(s) 519, 605
FalI AAGNNNNNCTT 2 cut(s) 456, 488
FaqI GGGAC 3 cut(s) 260, 383, 630
FatI CATG 2 cut(s) 515, 601
FauI CCCGC 1 cut(s) 285
FauNDI CATATG 2 cut(s) 365, 650
FbaI TGATCA 1 cut(s) 556
FblI GTMKAC 1 cut(s) 415
Fnu4HI GCNGC 5 cut(s) 70, 330, 385, 435, 461
FokI GGATG 3 cut(s) 152, 276, 434
Fsp4HI GCNGC 5 cut(s) 70, 330, 385, 435, 461
FspBI CTAG 1 cut(s) 576
GluI GCNGC 5 cut(s) 70, 330, 385, 435, 461
GsuI CTGGAG 1 cut(s) 647
HaeIII GGCC 1 cut(s) 332
HapII CCGG 3 cut(s) 66, 128, 431
HgaI GACGC 1 cut(s) 335
Hin1II CATG 2 cut(s) 519, 605
HincII GTYRAC 2 cut(s) 162, 325
HindII GTYRAC 2 cut(s) 162, 325
HinfI GANTC 3 cut(s) 82, 158, 225
HpaII CCGG 3 cut(s) 66, 128, 431
HphI GGTGA 2 cut(s) 146, 215
Hpy166II GTNNAC 4 cut(s) 112, 162, 325, 416
Hpy188I TCNGA 1 cut(s) 484
Hpy188III TCNNGA 1 cut(s) 79
Hpy8I GTNNAC 4 cut(s) 112, 162, 325, 416
HpyCH4III ACNGT 1 cut(s) 60
HpyCH4V TGCA 5 cut(s) 40, 460, 521, 542, 612
HpyF10VI GCNNNNNNNGC 4 cut(s) 248, 286, 585, 673
HpyF3I CTNAG 1 cut(s) 50
Hsp92II CATG 2 cut(s) 519, 605
Ksp22I TGATCA 1 cut(s) 556
Kzo9I GATC 3 cut(s) 136, 207, 556
Lsp1109I GCAGC 3 cut(s) 396, 446, 472
LweI GCATC 1 cut(s) 298
MaeI CTAG 1 cut(s) 576
MaeIII GTNAC 3 cut(s) 8, 466, 571
MalI GATC 3 cut(s) 138, 209, 558
MboI GATC 3 cut(s) 136, 207, 556
MboII GAAGA 2 cut(s) 328, 413
MluCI AATT 8 cut(s) 92, 185, 196, 421, 440, 485, 494, 522
MlyI GAGTC 2 cut(s) 167, 234
MnlI CCTC 3 cut(s) 67, 223, 526
MseI TTAA 1 cut(s) 116
MspA1I CMGCKG 1 cut(s) 437
MspCI CTTAAG 1 cut(s) 115
MspI CCGG 3 cut(s) 66, 128, 431
MspR9I CCNGG 5 cut(s) 66, 128, 129, 317, 452
MvaI CCWGG 2 cut(s) 317, 452
MvnI CGCG 1 cut(s) 329
MwoI GCNNNNNNNGC 4 cut(s) 248, 286, 585, 673
NciI CCSGG 3 cut(s) 66, 128, 129
NdeI CATATG 2 cut(s) 365, 650
NdeII GATC 3 cut(s) 136, 207, 556
NlaIII CATG 2 cut(s) 519, 605
NlaIV GGNNCC 1 cut(s) 57
NmuCI GTSAC 2 cut(s) 8, 466
PfeI GAWTC 1 cut(s) 82
PkrI GCNGC 5 cut(s) 71, 331, 386, 436, 462
PleI GAGTC 2 cut(s) 166, 233
PpsI GAGTC 2 cut(s) 166, 233
Psp6I CCWGG 2 cut(s) 315, 450
PspGI CCWGG 2 cut(s) 315, 450
PspN4I GGNNCC 1 cut(s) 57
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
SaqAI TTAA 1 cut(s) 116
SatI GCNGC 5 cut(s) 70, 330, 385, 435, 461
Sau3AI GATC 3 cut(s) 136, 207, 556
SchI GAGTC 2 cut(s) 167, 234
ScrFI CCNGG 5 cut(s) 66, 128, 129, 317, 452
SetI ASST 6 cut(s) 78, 321, 421, 482, 553, 581
SfaNI GCATC 1 cut(s) 298
SfcI CTRYAG 1 cut(s) 103
SmaI CCCGGG 1 cut(s) 129
SmlI CTYRAG 2 cut(s) 115, 177
SmoI CTYRAG 2 cut(s) 115, 177
Sse9I AATT 8 cut(s) 92, 185, 196, 421, 440, 485, 494, 522
SsiI CCGC 5 cut(s) 69, 251, 278, 329, 437
SspMI CTAG 1 cut(s) 576
StyD4I CCNGG 5 cut(s) 64, 126, 127, 315, 450
TaaI ACNGT 1 cut(s) 60
TaqI TCGA 2 cut(s) 215, 228
TasI AATT 8 cut(s) 92, 185, 196, 421, 440, 485, 494, 522
TauI GCSGC 2 cut(s) 72, 332
TfiI GAWTC 1 cut(s) 82
Tru1I TTAA 1 cut(s) 116
Tru9I TTAA 1 cut(s) 116
TscAI CASTG 1 cut(s) 13
TseFI GTSAC 2 cut(s) 8, 466
TseI GCWGC 3 cut(s) 384, 434, 460
Tsp45I GTSAC 2 cut(s) 8, 466
TspDTI ATGAA 3 cut(s) 14, 414, 420
TspMI CCCGGG 1 cut(s) 127
TspRI CASTG 1 cut(s) 13
Vha464I CTTAAG 1 cut(s) 115
XapI RAATTY 3 cut(s) 185, 485, 494
XmaI CCCGGG 1 cut(s) 127
XmiI GTMKAC 1 cut(s) 415
XspI CTAG 1 cut(s) 576
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.