FvH4_2g15860

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000056
Physical Location & Seq
Forward (+)
13898355 .. 13899890
1536 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g15860.t1

Sequence Viewer

Length: 807 bp
ATGACCACACAGATATCTCGTCGCTTTGTTTGCACGGTGAAACAAGAAGACGCATCCTTAGTGCCCCAACATGAAGAGAATGGCTTGCTTGTCATCAAGAGCTTGCTTCCCATCAAATTAGGGTTCGAACAGAAGACTGTAATCCACTCACTGGATGATAATCGCCTCTATTCTCATGGACCAGCTACGCTCTTAGCTACGAGATCTATGTCGGTCTTCTCCTCTAGTATCAAGCTATTGGCCGAGAGGCATTACTATAAAACTATTATTGCTGGGCATCTTTCCGGCATGGGTGTCCCGGAAAGTGAATGGTCATATATTTTCCGACGAATTTTCCGGGTAGTGGATGTGGCCGTCCCCAATGTCGTTATTGATGTGACCATATCGGACGTGACGACAATCACATATGACAACTATGCTAGGACAGCTGAAGATATGGTTGTAAGTGAATCCCTGGAAAGATATAGGGCCAAGCTTATTCCTGCAACTAAATCATCAATTGAAGGTTTGGAGAAAGTGCGAGTTGATAATCTTGAAGGAGAAGAAGTAGAACAACAATGTAGCAGACCCAAGAAAAGAAGTAGGCAGTCTTGTGTTATATGTCTGGATCCCCTTGATGCTGCTAGGACTACAGAAGAACAAGATTCTTGTGCTGAGCAAGAAGTTACAATTAATCGCTTGCCCTGCTCGCATCTTTATCATGGAGAATGCATTGTCATGTGGCTTAAGATCAACCACATGTGTCCTATGTGCCGATACCCAATGCCAACTGTGGAAGAGGCCAAACCCTTGCAATCAATAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000815 GO:0000920 GO:0002020 GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005829 GO:0005886 GO:0006810 GO:0006914 GO:0006996 GO:0007032 GO:0007034 GO:0007041 GO:0008150 GO:0008152 GO:0008289 GO:0008333 GO:0009056 GO:0009987 GO:0010008 GO:0010256 GO:0010564 GO:0010824 GO:0012505 GO:0016020 GO:0016032 GO:0016043 GO:0016050 GO:0016192 GO:0016197 GO:0016236 GO:0019058 GO:0019068 GO:0019899 GO:0022411 GO:0022607 GO:0031090 GO:0031210 GO:0031410 GO:0031982 GO:0032386 GO:0032509 GO:0032510 GO:0032879 GO:0032886 GO:0032984 GO:0032991 GO:0033043 GO:0034622 GO:0036257 GO:0036258 GO:0036452 GO:0039702 GO:0040012 GO:0040013 GO:0040017 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043900 GO:0043901 GO:0043902 GO:0043903 GO:0043933 GO:0044085 GO:0044237 GO:0044248 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046605 GO:0046755 GO:0046907 GO:0046983 GO:0048284 GO:0048518 GO:0048519 GO:0048524 GO:0048525 GO:0050789 GO:0050792 GO:0050794 GO:0050997 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051258 GO:0051259 GO:0051291 GO:0051301 GO:0051493 GO:0051641 GO:0051649 GO:0051704 GO:0051726 GO:0060341 GO:0060627 GO:0061024 GO:0061025 GO:0061763 GO:0061919 GO:0065003 GO:0065007 GO:0070405 GO:0070507 GO:0070925 GO:0071840 GO:0071944 GO:0071985 GO:0090174 GO:0097352 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:1902186 GO:1902187 GO:1902188 GO:1903649 GO:1903900 GO:1903901 GO:1903902 GO:1990381 GO:2000641
KEGG Pathways
Metabolic & Signaling
ko04144 ko04217 map04144 map04217
Pfam Domains
Protein Families
Snf7 zf-RING_2

Protein Analysis

269

Amino Acids

30.39

Weight (kDa)

6.09

Isoelectric Point (pI)

59.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 197 - 252 1.8e-08 Ring finger domain
zf-rbx1 PF12678 197 - 252 6.1e-09 RING-H2 zinc finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 151
AclWI GGATC 2 cut(s) 602, 615
AcoI YGGCCR 2 cut(s) 240, 351
AcsI RAATTY 1 cut(s) 330
AcuI CTGAAG 1 cut(s) 450
AfiI CCNNNNNNNGG 2 cut(s) 151, 343
AflII CTTAAG 1 cut(s) 725
AflIII ACRYGT 1 cut(s) 738
AgsI TTSAA 2 cut(s) 503, 536
AjiI CACGTC 1 cut(s) 391
AjnI CCWGG 1 cut(s) 453
AluBI AGCT 6 cut(s) 102, 185, 197, 235, 428, 475
AluI AGCT 6 cut(s) 102, 185, 197, 235, 428, 475
AlwI GGATC 2 cut(s) 602, 615
AoxI GGCC 4 cut(s) 240, 351, 468, 780
ApeKI GCWGC 1 cut(s) 620
ApoI RAATTY 1 cut(s) 330
AseI ATTAAT 1 cut(s) 672
AspS9I GGNCC 2 cut(s) 179, 468
AsuC2I CCSGG 2 cut(s) 299, 338
AsuHPI GGTGA 1 cut(s) 49
AsuII TTCGAA 1 cut(s) 126
AvaII GGWCC 1 cut(s) 179
BaeGI GKGCMC 1 cut(s) 66
BamHI GGATCC 1 cut(s) 607
BbsI GAAGAC 3 cut(s) 54, 140, 208
BbvI GCAGC 1 cut(s) 607
BccI CCATC 1 cut(s) 119
BceAI ACGGC 1 cut(s) 338
BciT130I CCWGG 1 cut(s) 455
BcnI CCSGG 2 cut(s) 299, 338
BfaI CTAG 3 cut(s) 225, 420, 624
BfmI CTRYAG 1 cut(s) 630
BfrI CTTAAG 1 cut(s) 725
BglII AGATCT 1 cut(s) 203
BisI GCNGC 1 cut(s) 621
BlpI GCTNAGC 1 cut(s) 654
BlsI GCNGC 1 cut(s) 622
Bme1390I CCNGG 3 cut(s) 299, 338, 455
Bme18I GGWCC 1 cut(s) 179
BmgBI CACGTC 1 cut(s) 391
BmgT120I GGNCC 2 cut(s) 179, 468
BmiI GGNNCC 1 cut(s) 609
BmrFI CCNGG 3 cut(s) 299, 338, 455
BmsI GCATC 4 cut(s) 62, 286, 607, 700
BpiI GAAGAC 3 cut(s) 54, 140, 208
Bpu1102I GCTNAGC 1 cut(s) 654
Bpu14I TTCGAA 1 cut(s) 126
BpuMI CCSGG 2 cut(s) 299, 338
BsaBI GATNNNNATC 1 cut(s) 159
BsaJI CCNNGG 1 cut(s) 453
BsaXI ACNNNNNCTCC 2 cut(s) 531, 561
Bsc4I CCNNNNNNNGG 2 cut(s) 151, 343
Bse1I ACTGG 1 cut(s) 156
Bse8I GATNNNNATC 1 cut(s) 159
BseBI CCWGG 1 cut(s) 455
BseDI CCNNGG 1 cut(s) 453
BseGI GGATG 3 cut(s) 53, 160, 352
BseJI GATNNNNATC 1 cut(s) 159
BseLI CCNNNNNNNGG 2 cut(s) 151, 343
BseMII CTCAG 1 cut(s) 645
BseNI ACTGG 1 cut(s) 156
BseRI GAGGAG 1 cut(s) 211
BseSI GKGCMC 1 cut(s) 66
BseXI GCAGC 1 cut(s) 607
BseYI CCCAGC 1 cut(s) 272
BshFI GGCC 4 cut(s) 242, 353, 470, 782
BsiSI CCGG 3 cut(s) 285, 299, 337
BslFI GGGAC 2 cut(s) 281, 341
BslI CCNNNNNNNGG 2 cut(s) 151, 343
BsmFI GGGAC 2 cut(s) 281, 341
BsmI GAATGC 1 cut(s) 713
BsnI GGCC 4 cut(s) 242, 353, 470, 782
Bsp119I TTCGAA 1 cut(s) 126
Bsp1286I GDGCHC 1 cut(s) 66
Bsp143I GATC 3 cut(s) 203, 607, 729
Bsp1720I GCTNAGC 1 cut(s) 654
BspANI GGCC 4 cut(s) 242, 353, 470, 782
BspCNI CTCAG 1 cut(s) 646
BspLI GGNNCC 1 cut(s) 609
BspPI GGATC 2 cut(s) 602, 615
BspT104I TTCGAA 1 cut(s) 126
BspTI CTTAAG 1 cut(s) 725
BsrI ACTGG 1 cut(s) 156
BssECI CCNNGG 1 cut(s) 453
BssMI GATC 3 cut(s) 203, 607, 729
Bst2UI CCWGG 1 cut(s) 455
Bst4CI ACNGT 3 cut(s) 37, 139, 772
Bst6I CTCTTC 2 cut(s) 69, 771
BstAFI CTTAAG 1 cut(s) 725
BstBI TTCGAA 1 cut(s) 126
BstC8I GCNNGC 4 cut(s) 86, 104, 680, 689
BstDEI CTNAG 3 cut(s) 58, 193, 654
BstF5I GGATG 3 cut(s) 53, 160, 352
BstKTI GATC 3 cut(s) 206, 610, 732
BstMBI GATC 3 cut(s) 203, 607, 729
BstMWI GCNNNNNNNGC 4 cut(s) 30, 425, 684, 688
BstNI CCWGG 1 cut(s) 455
BstNSI RCATGY 1 cut(s) 742
BstSCI CCNGG 3 cut(s) 297, 336, 453
BstSFI CTRYAG 1 cut(s) 630
BstSLI GKGCMC 1 cut(s) 66
BstV1I GCAGC 1 cut(s) 607
BstV2I GAAGAC 3 cut(s) 54, 140, 208
BstX2I RGATCY 2 cut(s) 203, 607
BstYI RGATCY 2 cut(s) 203, 607
BsuRI GGCC 4 cut(s) 242, 353, 470, 782
BtrI CACGTC 1 cut(s) 391
BtsCI GGATG 3 cut(s) 53, 160, 352
BtsIMutI CAGTG 1 cut(s) 149
Cac8I GCNNGC 4 cut(s) 86, 104, 680, 689
Cfr13I GGNCC 2 cut(s) 179, 468
CseI GACGC 1 cut(s) 59
CviAII CATG 6 cut(s) 71, 176, 289, 701, 718, 739
DdeI CTNAG 3 cut(s) 58, 193, 654
DpnI GATC 3 cut(s) 205, 609, 731
DpnII GATC 3 cut(s) 203, 607, 729
EaeI YGGCCR 2 cut(s) 240, 351
Eam1104I CTCTTC 2 cut(s) 69, 771
EarI CTCTTC 2 cut(s) 69, 771
Eco32I GATATC 1 cut(s) 15
Eco47I GGWCC 1 cut(s) 179
Eco57I CTGAAG 1 cut(s) 450
EcoRII CCWGG 1 cut(s) 453
EcoRV GATATC 1 cut(s) 15
EcoT22I ATGCAT 1 cut(s) 713
FaeI CATG 6 cut(s) 74, 179, 292, 704, 721, 742
FaqI GGGAC 2 cut(s) 281, 341
FatI CATG 6 cut(s) 70, 175, 288, 700, 717, 738
FauNDI CATATG 1 cut(s) 406
Fnu4HI GCNGC 1 cut(s) 621
FokI GGATG 3 cut(s) 40, 167, 359
Fsp4HI GCNGC 1 cut(s) 621
FspBI CTAG 3 cut(s) 225, 420, 624
GluI GCNGC 1 cut(s) 621
GsaI CCCAGC 1 cut(s) 276
HaeIII GGCC 4 cut(s) 242, 353, 470, 782
HapII CCGG 3 cut(s) 285, 299, 337
HgaI GACGC 1 cut(s) 59
Hin1II CATG 6 cut(s) 74, 179, 292, 704, 721, 742
HindIII AAGCTT 1 cut(s) 473
HinfI GANTC 2 cut(s) 449, 644
HpaII CCGG 3 cut(s) 285, 299, 337
HphI GGTGA 1 cut(s) 49
Hpy188I TCNGA 2 cut(s) 326, 388
Hpy188III TCNNGA 3 cut(s) 97, 533, 605
Hpy99I CGWCG 2 cut(s) 24, 330
HpyAV CCTTC 2 cut(s) 497, 530
HpyCH4III ACNGT 3 cut(s) 37, 139, 772
HpyCH4IV ACGT 1 cut(s) 390
HpyCH4V TGCA 4 cut(s) 33, 485, 711, 793
HpyF10VI GCNNNNNNNGC 4 cut(s) 30, 425, 684, 688
HpyF3I CTNAG 3 cut(s) 58, 193, 654
HpySE526I ACGT 1 cut(s) 390
Hsp92II CATG 6 cut(s) 74, 179, 292, 704, 721, 742
Kzo9I GATC 3 cut(s) 203, 607, 729
Lsp1109I GCAGC 1 cut(s) 607
LweI GCATC 4 cut(s) 62, 286, 607, 700
MaeI CTAG 3 cut(s) 225, 420, 624
MaeII ACGT 1 cut(s) 390
MaeIII GTNAC 3 cut(s) 376, 391, 664
MalI GATC 3 cut(s) 205, 609, 731
MboI GATC 3 cut(s) 203, 607, 729
MboII GAAGA 8 cut(s) 59, 86, 145, 208, 443, 554, 647, 788
MfeI CAATTG 1 cut(s) 498
MflI RGATCY 2 cut(s) 203, 607
MhlI GDGCHC 1 cut(s) 66
MluCI AATT 4 cut(s) 116, 330, 498, 669
MmeI TCCRAC 1 cut(s) 349
MnlI CCTC 4 cut(s) 176, 232, 240, 772
Mph1103I ATGCAT 1 cut(s) 713
MseI TTAA 2 cut(s) 672, 726
MslI CAYNNNNRTG 1 cut(s) 716
MspA1I CMGCKG 1 cut(s) 428
MspCI CTTAAG 1 cut(s) 725
MspI CCGG 3 cut(s) 285, 299, 337
MspR9I CCNGG 3 cut(s) 299, 338, 455
MunI CAATTG 1 cut(s) 498
Mva1269I GAATGC 1 cut(s) 713
MvaI CCWGG 1 cut(s) 455
MwoI GCNNNNNNNGC 4 cut(s) 30, 425, 684, 688
NciI CCSGG 2 cut(s) 299, 338
NdeI CATATG 1 cut(s) 406
NdeII GATC 3 cut(s) 203, 607, 729
NlaIII CATG 6 cut(s) 74, 179, 292, 704, 721, 742
NlaIV GGNNCC 1 cut(s) 609
NmeAIII GCCGAG 1 cut(s) 268
NmuCI GTSAC 2 cut(s) 376, 391
NsiI ATGCAT 1 cut(s) 713
NspI RCATGY 1 cut(s) 742
NspV TTCGAA 1 cut(s) 126
PciI ACATGT 1 cut(s) 738
PcsI WCGNNNNNNNCGW 1 cut(s) 392
PctI GAATGC 1 cut(s) 713
PfeI GAWTC 2 cut(s) 449, 644
PflMI CCANNNNNTGG 1 cut(s) 151
PfoI TCCNGGA 1 cut(s) 297
PkrI GCNGC 1 cut(s) 622
PscI ACATGT 1 cut(s) 738
PshBI ATTAAT 1 cut(s) 672
Psp6I CCWGG 1 cut(s) 453
PspFI CCCAGC 1 cut(s) 272
PspGI CCWGG 1 cut(s) 453
PspN4I GGNNCC 1 cut(s) 609
PspPI GGNCC 2 cut(s) 179, 468
PsuI RGATCY 2 cut(s) 203, 607
PvuII CAGCTG 1 cut(s) 428
RseI CAYNNNNRTG 1 cut(s) 716
SaqAI TTAA 2 cut(s) 672, 726
SatI GCNGC 1 cut(s) 621
Sau3AI GATC 3 cut(s) 203, 607, 729
Sau96I GGNCC 2 cut(s) 179, 468
ScrFI CCNGG 3 cut(s) 299, 338, 455
SduI GDGCHC 1 cut(s) 66
SetI ASST 9 cut(s) 104, 187, 199, 237, 393, 430, 477, 508, 806
SfaNI GCATC 4 cut(s) 62, 286, 607, 700
SfcI CTRYAG 1 cut(s) 630
SfuI TTCGAA 1 cut(s) 126
SinI GGWCC 1 cut(s) 179
SmiMI CAYNNNNRTG 1 cut(s) 716
SmlI CTYRAG 1 cut(s) 725
SmoI CTYRAG 1 cut(s) 725
Sse9I AATT 4 cut(s) 116, 330, 498, 669
SspMI CTAG 3 cut(s) 225, 420, 624
StyD4I CCNGG 3 cut(s) 297, 336, 453
TaaI ACNGT 3 cut(s) 37, 139, 772
TaiI ACGT 1 cut(s) 393
TaqI TCGA 1 cut(s) 126
TaqII GACCGA 1 cut(s) 202
TasI AATT 4 cut(s) 116, 330, 498, 669
TfiI GAWTC 2 cut(s) 449, 644
Tru1I TTAA 2 cut(s) 672, 726
Tru9I TTAA 2 cut(s) 672, 726
TscAI CASTG 1 cut(s) 156
TseFI GTSAC 2 cut(s) 376, 391
TseI GCWGC 1 cut(s) 620
Tsp45I GTSAC 2 cut(s) 376, 391
TspDTI ATGAA 1 cut(s) 87
TspRI CASTG 1 cut(s) 156
Van91I CCANNNNNTGG 1 cut(s) 151
Vha464I CTTAAG 1 cut(s) 725
VpaK11BI GGWCC 1 cut(s) 179
VspI ATTAAT 1 cut(s) 672
XapI RAATTY 1 cut(s) 330
XceI RCATGY 1 cut(s) 742
XspI CTAG 3 cut(s) 225, 420, 624
Zsp2I ATGCAT 1 cut(s) 713
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.