ubiquitin-protein transferase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 108 - 288 | 1.8e-14 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 854 |
| AatII | GACGTC | 1 cut(s) | 780 |
| Acc65I | GGTACC | 1 cut(s) | 810 |
| AccB1I | GGYRCC | 1 cut(s) | 810 |
| AccII | CGCG | 1 cut(s) | 442 |
| AciI | CCGC | 2 cut(s) | 132, 524 |
| AclWI | GGATC | 1 cut(s) | 166 |
| AcsI | RAATTY | 3 cut(s) | 710, 784, 799 |
| AcuI | CTGAAG | 1 cut(s) | 747 |
| AcyI | GRCGYC | 1 cut(s) | 777 |
| AfaI | GTAC | 4 cut(s) | 705, 812, 865, 871 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 279, 530, 618, 820 |
| AgsI | TTSAA | 2 cut(s) | 351, 641 |
| AjnI | CCWGG | 1 cut(s) | 96 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 258, 290 |
| AluBI | AGCT | 3 cut(s) | 374, 405, 685 |
| AluI | AGCT | 3 cut(s) | 374, 405, 685 |
| Alw26I | GTCTC | 4 cut(s) | 321, 602, 672, 799 |
| AlwI | GGATC | 1 cut(s) | 166 |
| Ama87I | CYCGRG | 1 cut(s) | 447 |
| AoxI | GGCC | 3 cut(s) | 578, 747, 883 |
| ApeKI | GCWGC | 3 cut(s) | 457, 520, 542 |
| ApoI | RAATTY | 3 cut(s) | 710, 784, 799 |
| Asp718I | GGTACC | 1 cut(s) | 810 |
| AspS9I | GGNCC | 2 cut(s) | 597, 747 |
| AsuHPI | GGTGA | 1 cut(s) | 492 |
| AsuII | TTCGAA | 1 cut(s) | 797 |
| AvaI | CYCGRG | 1 cut(s) | 447 |
| AvaII | GGWCC | 1 cut(s) | 597 |
| BaeGI | GKGCMC | 1 cut(s) | 448 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 802, 835 |
| BanI | GGYRCC | 1 cut(s) | 810 |
| BanII | GRGCYC | 2 cut(s) | 286, 624 |
| BbvI | GCAGC | 3 cut(s) | 444, 507, 529 |
| BccI | CCATC | 3 cut(s) | 7, 469, 611 |
| BciT130I | CCWGG | 1 cut(s) | 98 |
| BclI | TGATCA | 1 cut(s) | 649 |
| BcoDI | GTCTC | 4 cut(s) | 321, 602, 672, 799 |
| BfaI | CTAG | 1 cut(s) | 744 |
| BisI | GCNGC | 5 cut(s) | 132, 458, 521, 524, 543 |
| BlsI | GCNGC | 5 cut(s) | 133, 459, 522, 525, 544 |
| Bme1390I | CCNGG | 1 cut(s) | 98 |
| Bme18I | GGWCC | 1 cut(s) | 597 |
| BmeT110I | CYCGRG | 1 cut(s) | 447 |
| BmgT120I | GGNCC | 2 cut(s) | 597, 747 |
| BmiI | GGNNCC | 3 cut(s) | 285, 599, 812 |
| BmrFI | CCNGG | 1 cut(s) | 98 |
| BmsI | GCATC | 3 cut(s) | 232, 377, 845 |
| Bpu14I | TTCGAA | 1 cut(s) | 797 |
| BsaBI | GATNNNNATC | 1 cut(s) | 485 |
| BsaHI | GRCGYC | 1 cut(s) | 777 |
| BsaI | GGTCTC | 1 cut(s) | 602 |
| BsaJI | CCNNGG | 2 cut(s) | 185, 840 |
| BsaWI | WCCGGW | 1 cut(s) | 155 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 17, 47, 254, 284 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 279, 530, 618, 820 |
| Bse1I | ACTGG | 2 cut(s) | 434, 711 |
| Bse8I | GATNNNNATC | 1 cut(s) | 485 |
| BseBI | CCWGG | 1 cut(s) | 98 |
| BseDI | CCNNGG | 2 cut(s) | 185, 840 |
| BseGI | GGATG | 2 cut(s) | 290, 836 |
| BseJI | GATNNNNATC | 1 cut(s) | 485 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 279, 530, 618, 820 |
| BseMII | CTCAG | 1 cut(s) | 20 |
| BseNI | ACTGG | 2 cut(s) | 434, 711 |
| BseRI | GAGGAG | 1 cut(s) | 165 |
| BseSI | GKGCMC | 1 cut(s) | 448 |
| BseXI | GCAGC | 3 cut(s) | 444, 507, 529 |
| Bsh1236I | CGCG | 1 cut(s) | 442 |
| BshFI | GGCC | 3 cut(s) | 580, 749, 885 |
| BshNI | GGYRCC | 1 cut(s) | 810 |
| BsiHKCI | CYCGRG | 1 cut(s) | 447 |
| BsiSI | CCGG | 2 cut(s) | 156, 886 |
| BsiWI | CGTACG | 1 cut(s) | 863 |
| BslFI | GGGAC | 1 cut(s) | 764 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 279, 530, 618, 820 |
| BsmAI | GTCTC | 4 cut(s) | 321, 602, 672, 799 |
| BsmBI | CGTCTC | 2 cut(s) | 321, 799 |
| BsmFI | GGGAC | 1 cut(s) | 764 |
| BsnI | GGCC | 3 cut(s) | 580, 749, 885 |
| Bso31I | GGTCTC | 1 cut(s) | 602 |
| BsoBI | CYCGRG | 1 cut(s) | 447 |
| Bsp119I | TTCGAA | 1 cut(s) | 797 |
| Bsp1286I | GDGCHC | 3 cut(s) | 286, 448, 624 |
| Bsp143I | GATC | 4 cut(s) | 158, 299, 366, 649 |
| Bsp19I | CCATGG | 1 cut(s) | 185 |
| BspACI | CCGC | 2 cut(s) | 132, 524 |
| BspANI | GGCC | 3 cut(s) | 580, 749, 885 |
| BspCNI | CTCAG | 1 cut(s) | 19 |
| BspFNI | CGCG | 1 cut(s) | 442 |
| BspLI | GGNNCC | 3 cut(s) | 285, 599, 812 |
| BspPI | GGATC | 1 cut(s) | 166 |
| BspT104I | TTCGAA | 1 cut(s) | 797 |
| BspT107I | GGYRCC | 1 cut(s) | 810 |
| BspTNI | GGTCTC | 1 cut(s) | 602 |
| BsrI | ACTGG | 2 cut(s) | 434, 711 |
| BssECI | CCNNGG | 2 cut(s) | 185, 840 |
| BssMI | GATC | 4 cut(s) | 158, 299, 366, 649 |
| BssNI | GRCGYC | 1 cut(s) | 777 |
| BssT1I | CCWWGG | 2 cut(s) | 185, 840 |
| Bst2UI | CCWGG | 1 cut(s) | 98 |
| Bst4CI | ACNGT | 2 cut(s) | 412, 810 |
| Bst6I | CTCTTC | 1 cut(s) | 502 |
| BstACI | GRCGYC | 1 cut(s) | 777 |
| BstBI | TTCGAA | 1 cut(s) | 797 |
| BstC8I | GCNNGC | 3 cut(s) | 129, 444, 578 |
| BstDEI | CTNAG | 3 cut(s) | 6, 278, 674 |
| BstDSI | CCRYGG | 1 cut(s) | 185 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 277 |
| BstF5I | GGATG | 2 cut(s) | 290, 836 |
| BstFNI | CGCG | 1 cut(s) | 442 |
| BstKTI | GATC | 4 cut(s) | 161, 302, 369, 652 |
| BstMAI | GTCTC | 4 cut(s) | 321, 602, 672, 799 |
| BstMBI | GATC | 4 cut(s) | 158, 299, 366, 649 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 114 |
| BstNI | CCWGG | 1 cut(s) | 98 |
| BstSCI | CCNGG | 1 cut(s) | 96 |
| BstSLI | GKGCMC | 1 cut(s) | 448 |
| BstUI | CGCG | 1 cut(s) | 442 |
| BstV1I | GCAGC | 3 cut(s) | 444, 507, 529 |
| BstX2I | RGATCY | 1 cut(s) | 158 |
| BstYI | RGATCY | 1 cut(s) | 158 |
| BsuRI | GGCC | 3 cut(s) | 580, 749, 885 |
| BtgI | CCRYGG | 1 cut(s) | 185 |
| BtsCI | GGATG | 2 cut(s) | 290, 836 |
| Cac8I | GCNNGC | 3 cut(s) | 129, 444, 578 |
| Cfr13I | GGNCC | 2 cut(s) | 597, 747 |
| CsiI | ACCWGGT | 1 cut(s) | 96 |
| Csp6I | GTAC | 4 cut(s) | 704, 811, 864, 870 |
| CviAII | CATG | 3 cut(s) | 186, 454, 594 |
| CviQI | GTAC | 4 cut(s) | 704, 811, 864, 870 |
| DdeI | CTNAG | 3 cut(s) | 6, 278, 674 |
| DpnI | GATC | 4 cut(s) | 160, 301, 368, 651 |
| DpnII | GATC | 4 cut(s) | 158, 299, 366, 649 |
| Eam1104I | CTCTTC | 1 cut(s) | 502 |
| EarI | CTCTTC | 1 cut(s) | 502 |
| Eco130I | CCWWGG | 2 cut(s) | 185, 840 |
| Eco24I | GRGCYC | 2 cut(s) | 286, 624 |
| Eco31I | GGTCTC | 1 cut(s) | 602 |
| Eco47I | GGWCC | 1 cut(s) | 597 |
| Eco57I | CTGAAG | 1 cut(s) | 747 |
| Eco88I | CYCGRG | 1 cut(s) | 447 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 277 |
| EcoRI | GAATTC | 1 cut(s) | 799 |
| EcoRII | CCWGG | 1 cut(s) | 96 |
| EcoT14I | CCWWGG | 2 cut(s) | 185, 840 |
| EcoT38I | GRGCYC | 2 cut(s) | 286, 624 |
| ErhI | CCWWGG | 2 cut(s) | 185, 840 |
| Esp3I | CGTCTC | 2 cut(s) | 321, 799 |
| FaeI | CATG | 3 cut(s) | 189, 457, 597 |
| FaqI | GGGAC | 1 cut(s) | 764 |
| FatI | CATG | 3 cut(s) | 185, 453, 593 |
| FbaI | TGATCA | 1 cut(s) | 649 |
| Fnu4HI | GCNGC | 5 cut(s) | 132, 458, 521, 524, 543 |
| FokI | GGATG | 2 cut(s) | 277, 823 |
| FriOI | GRGCYC | 2 cut(s) | 286, 624 |
| Fsp4HI | GCNGC | 5 cut(s) | 132, 458, 521, 524, 543 |
| FspBI | CTAG | 1 cut(s) | 744 |
| GluI | GCNGC | 5 cut(s) | 132, 458, 521, 524, 543 |
| HaeIII | GGCC | 3 cut(s) | 580, 749, 885 |
| HapII | CCGG | 2 cut(s) | 156, 886 |
| Hin1I | GRCGYC | 1 cut(s) | 777 |
| Hin1II | CATG | 3 cut(s) | 189, 457, 597 |
| HincII | GTYRAC | 1 cut(s) | 418 |
| HindII | GTYRAC | 1 cut(s) | 418 |
| HindIII | AAGCTT | 1 cut(s) | 683 |
| HinfI | GANTC | 9 cut(s) | 4, 42, 203, 233, 356, 450, 794, 830, 889 |
| HpaII | CCGG | 2 cut(s) | 156, 886 |
| HphI | GGTGA | 1 cut(s) | 492 |
| Hpy166II | GTNNAC | 1 cut(s) | 418 |
| Hpy188I | TCNGA | 7 cut(s) | 9, 91, 299, 304, 654, 727, 894 |
| Hpy188III | TCNNGA | 4 cut(s) | 200, 478, 781, 804 |
| Hpy8I | GTNNAC | 1 cut(s) | 418 |
| Hpy99I | CGWCG | 1 cut(s) | 78 |
| HpyAV | CCTTC | 3 cut(s) | 16, 256, 304 |
| HpyCH4III | ACNGT | 2 cut(s) | 412, 810 |
| HpyCH4IV | ACGT | 1 cut(s) | 777 |
| HpyCH4V | TGCA | 5 cut(s) | 61, 576, 668, 771, 836 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 114 |
| HpyF3I | CTNAG | 3 cut(s) | 6, 278, 674 |
| HpySE526I | ACGT | 1 cut(s) | 777 |
| Hsp92I | GRCGYC | 1 cut(s) | 777 |
| Hsp92II | CATG | 3 cut(s) | 189, 457, 597 |
| KpnI | GGTACC | 1 cut(s) | 814 |
| Ksp22I | TGATCA | 1 cut(s) | 649 |
| Kzo9I | GATC | 4 cut(s) | 158, 299, 366, 649 |
| LmnI | GCTCC | 2 cut(s) | 178, 289 |
| Lsp1109I | GCAGC | 3 cut(s) | 444, 507, 529 |
| LweI | GCATC | 3 cut(s) | 232, 377, 845 |
| MabI | ACCWGGT | 1 cut(s) | 96 |
| MaeI | CTAG | 1 cut(s) | 744 |
| MaeII | ACGT | 1 cut(s) | 777 |
| MaeIII | GTNAC | 1 cut(s) | 739 |
| MalI | GATC | 4 cut(s) | 160, 301, 368, 651 |
| MboI | GATC | 4 cut(s) | 158, 299, 366, 649 |
| MboII | GAAGA | 5 cut(s) | 318, 415, 489, 740, 851 |
| MfeI | CAATTG | 2 cut(s) | 62, 757 |
| MflI | RGATCY | 1 cut(s) | 158 |
| MhlI | GDGCHC | 3 cut(s) | 286, 448, 624 |
| MlyI | GAGTC | 4 cut(s) | 36, 197, 365, 459 |
| MmeI | TCCRAC | 1 cut(s) | 311 |
| MnlI | CCTC | 7 cut(s) | 21, 137, 177, 186, 248, 505, 611 |
| MseI | TTAA | 1 cut(s) | 429 |
| MspA1I | CMGCKG | 1 cut(s) | 134 |
| MspI | CCGG | 2 cut(s) | 156, 886 |
| MspR9I | CCNGG | 1 cut(s) | 98 |
| MunI | CAATTG | 2 cut(s) | 62, 757 |
| MvaI | CCWGG | 1 cut(s) | 98 |
| MvnI | CGCG | 1 cut(s) | 442 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 114 |
| NcoI | CCATGG | 1 cut(s) | 185 |
| NdeII | GATC | 4 cut(s) | 158, 299, 366, 649 |
| NlaIII | CATG | 3 cut(s) | 189, 457, 597 |
| NlaIV | GGNNCC | 3 cut(s) | 285, 599, 812 |
| NmuCI | GTSAC | 1 cut(s) | 739 |
| NspV | TTCGAA | 1 cut(s) | 797 |
| PfeI | GAWTC | 4 cut(s) | 233, 794, 830, 889 |
| Pfl23II | CGTACG | 1 cut(s) | 863 |
| PflFI | GACNNNGTC | 1 cut(s) | 737 |
| PkrI | GCNGC | 5 cut(s) | 133, 459, 522, 525, 544 |
| PleI | GAGTC | 4 cut(s) | 36, 197, 364, 458 |
| PpsI | GAGTC | 4 cut(s) | 36, 197, 364, 458 |
| PsiI | TTATAA | 1 cut(s) | 854 |
| Psp6I | CCWGG | 1 cut(s) | 96 |
| PspGI | CCWGG | 1 cut(s) | 96 |
| PspLI | CGTACG | 1 cut(s) | 863 |
| PspN4I | GGNNCC | 3 cut(s) | 285, 599, 812 |
| PspPI | GGNCC | 2 cut(s) | 597, 747 |
| PsuI | RGATCY | 1 cut(s) | 158 |
| PsyI | GACNNNGTC | 1 cut(s) | 737 |
| RsaI | GTAC | 4 cut(s) | 705, 812, 865, 871 |
| RsaNI | GTAC | 4 cut(s) | 704, 811, 864, 870 |
| SaqAI | TTAA | 1 cut(s) | 429 |
| SatI | GCNGC | 5 cut(s) | 132, 458, 521, 524, 543 |
| Sau3AI | GATC | 4 cut(s) | 158, 299, 366, 649 |
| Sau96I | GGNCC | 2 cut(s) | 597, 747 |
| SchI | GAGTC | 4 cut(s) | 36, 197, 365, 459 |
| ScrFI | CCNGG | 1 cut(s) | 98 |
| SduI | GDGCHC | 3 cut(s) | 286, 448, 624 |
| SetI | ASST | 7 cut(s) | 32, 99, 148, 376, 407, 687, 780 |
| SexAI | ACCWGGT | 1 cut(s) | 96 |
| SfaNI | GCATC | 3 cut(s) | 232, 377, 845 |
| SfuI | TTCGAA | 1 cut(s) | 797 |
| SinI | GGWCC | 1 cut(s) | 597 |
| SsiI | CCGC | 2 cut(s) | 132, 524 |
| SspMI | CTAG | 1 cut(s) | 744 |
| StyD4I | CCNGG | 1 cut(s) | 96 |
| StyI | CCWWGG | 2 cut(s) | 185, 840 |
| TaaI | ACNGT | 2 cut(s) | 412, 810 |
| TaiI | ACGT | 1 cut(s) | 780 |
| TaqI | TCGA | 6 cut(s) | 240, 255, 354, 624, 797, 803 |
| TatI | WGTACW | 1 cut(s) | 703 |
| TauI | GCSGC | 2 cut(s) | 134, 526 |
| TfiI | GAWTC | 4 cut(s) | 233, 794, 830, 889 |
| Tru1I | TTAA | 1 cut(s) | 429 |
| Tru9I | TTAA | 1 cut(s) | 429 |
| TseFI | GTSAC | 1 cut(s) | 739 |
| TseI | GCWGC | 3 cut(s) | 457, 520, 542 |
| Tsp45I | GTSAC | 1 cut(s) | 739 |
| TspDTI | ATGAA | 3 cut(s) | 246, 497, 570 |
| Tth111I | GACNNNGTC | 1 cut(s) | 737 |
| VpaK11BI | GGWCC | 1 cut(s) | 597 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 277 |
| XapI | RAATTY | 3 cut(s) | 710, 784, 799 |
| XspI | CTAG | 1 cut(s) | 744 |
| ZraI | GACGTC | 1 cut(s) | 778 |