FvH4_4g31810

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000056
Physical Location & Seq
Forward (+)
30779036 .. 30781472
2437 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g31810.t1

Sequence Viewer

Length: 681 bp
ATGGAGGAGACATTTAGCTATCGTCACGTAGCACTGCAAACGAGTATAACCGAGCTGAGAGGCTCATTAGAGGAGGACAAGATTTTCGTCAGAATGAGGTTCTACAAGTGCAGCATATGGCACCGTGTGAGAACCGATCCGATTGATGTTGATTACATGAATGTCGTAGCGCAAATGGATTTGTGGGTAACGTTTTCTCTTTTCAAGAAGAAACCACCCCAAGGAAAAGCCGGTAGGAAAGTGTATGAAAAGTTCATCTCCAAGTGTCTCAAGCGTATGAGTGTGCCGGAAGATGAACATCCTTTTATTGTTCAGAAGCTATTCGATGCGATTGAGGCTGCCGCCTCCCCTGTGGACCCTGTTGTAGTGTTTGTGTGGGAAGTCATTCACCGCGTCGGAGATGGACATGATGAACCATCTAGGCTCAATTTCATTCCTGCGAGCAGATCATCAATCCAGGGTCTGGAGCCGGTGACAGTACTCGATGCTGATCCCTTGTCCTGTGCTATTTGCTTGGACGATTTTGAACAACAACCCTTTACTCGGTTGCCCTGTACACACCCGTTTCATGTCCACTGCATTGTTCAATGCCTGGAGATCAACCACCTGTGTCCCATCTGCCGATACGCTATGCCAACTGAAGAAGAAGTGACTAAACCCTGCTCGACCTGTCCAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

227

Amino Acids

26.0

Weight (kDa)

5.73

Isoelectric Point (pI)

55.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 167 - 208 1.8e-09 Ring finger domain
zf-RING_11 PF17123 168 - 194 1.4e-07 RING-like zinc finger
zf-C3HC4_2 PF13923 168 - 207 7e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 120
AccB7I CCANNNNNTGG 1 cut(s) 463
AccII CGCG 1 cut(s) 393
AciI CCGC 2 cut(s) 342, 391
AclI AACGTT 1 cut(s) 191
AclWI GGATC 2 cut(s) 131, 485
AcuI CTGAAG 1 cut(s) 660
AdeI CACNNNGTG 1 cut(s) 127
AfaI GTAC 2 cut(s) 480, 556
AfiI CCNNNNNNNGG 3 cut(s) 221, 463, 543
AgsI TTSAA 3 cut(s) 205, 527, 587
AjnI CCWGG 2 cut(s) 456, 591
AluBI AGCT 3 cut(s) 18, 55, 319
AluI AGCT 3 cut(s) 18, 55, 319
Alw26I GTCTC 2 cut(s) 2, 272
AlwI GGATC 2 cut(s) 131, 485
AlwNI CAGNNNCTG 1 cut(s) 463
ApeKI GCWGC 2 cut(s) 111, 338
ArsI GACNNNNNNTTYG 2 cut(s) 68, 100
Asp700I GAANNNNTTC 2 cut(s) 320, 384
AspLEI GCGC 1 cut(s) 172
AspS9I GGNCC 1 cut(s) 355
AsuHPI GGTGA 2 cut(s) 380, 484
AvaII GGWCC 1 cut(s) 355
BanI GGYRCC 1 cut(s) 120
BbvI GCAGC 2 cut(s) 123, 325
BccI CCATC 3 cut(s) 395, 424, 623
BciT130I CCWGG 2 cut(s) 458, 593
BcoDI GTCTC 2 cut(s) 2, 272
BfaI CTAG 1 cut(s) 420
BisI GCNGC 3 cut(s) 112, 339, 342
BlsI GCNGC 3 cut(s) 113, 340, 343
BmcAI AGTACT 1 cut(s) 480
Bme1390I CCNGG 2 cut(s) 458, 593
Bme18I GGWCC 1 cut(s) 355
BmgT120I GGNCC 1 cut(s) 355
BmiI GGNNCC 3 cut(s) 122, 357, 468
BmrFI CCNGG 2 cut(s) 458, 593
BmsI GCATC 2 cut(s) 316, 475
BpmI CTGGAG 2 cut(s) 485, 614
BpuEI CTTGAG 1 cut(s) 254
BsaAI YACGTR 1 cut(s) 28
BsaBI GATNNNNATC 2 cut(s) 297, 489
BsaJI CCNNGG 2 cut(s) 220, 457
Bsc4I CCNNNNNNNGG 3 cut(s) 221, 463, 543
Bse118I RCCGGY 2 cut(s) 230, 469
Bse8I GATNNNNATC 2 cut(s) 297, 489
BseBI CCWGG 2 cut(s) 458, 593
BseDI CCNNGG 2 cut(s) 220, 457
BseGI GGATG 1 cut(s) 298
BseJI GATNNNNATC 2 cut(s) 297, 489
BseLI CCNNNNNNNGG 3 cut(s) 221, 463, 543
BseMII CTCAG 1 cut(s) 47
BseRI GAGGAG 2 cut(s) 20, 86
BseXI GCAGC 2 cut(s) 123, 325
BsgI GTGCAG 1 cut(s) 130
Bsh1236I CGCG 1 cut(s) 393
BshNI GGYRCC 1 cut(s) 120
BsiSI CCGG 3 cut(s) 231, 287, 470
BslFI GGGAC 1 cut(s) 597
BslI CCNNNNNNNGG 3 cut(s) 221, 463, 543
BsmAI GTCTC 2 cut(s) 2, 272
BsmFI GGGAC 1 cut(s) 597
Bsp1407I TGTACA 1 cut(s) 554
Bsp143I GATC 4 cut(s) 136, 446, 490, 597
BspACI CCGC 2 cut(s) 342, 391
BspCNI CTCAG 1 cut(s) 48
BspFNI CGCG 1 cut(s) 393
BspLI GGNNCC 3 cut(s) 122, 357, 468
BspPI GGATC 2 cut(s) 131, 485
BspT107I GGYRCC 1 cut(s) 120
BsrFI RCCGGY 2 cut(s) 230, 469
BsrGI TGTACA 1 cut(s) 554
BssAI RCCGGY 2 cut(s) 230, 469
BssECI CCNNGG 2 cut(s) 220, 457
BssMI GATC 4 cut(s) 136, 446, 490, 597
BssT1I CCWWGG 1 cut(s) 220
Bst2UI CCWGG 2 cut(s) 458, 593
Bst4CI ACNGT 2 cut(s) 125, 478
BstAUI TGTACA 1 cut(s) 554
BstBAI YACGTR 1 cut(s) 28
BstC8I GCNNGC 1 cut(s) 442
BstDEI CTNAG 1 cut(s) 56
BstF5I GGATG 1 cut(s) 298
BstFNI CGCG 1 cut(s) 393
BstHHI GCGC 1 cut(s) 172
BstKTI GATC 4 cut(s) 139, 449, 493, 600
BstMAI GTCTC 2 cut(s) 2, 272
BstMBI GATC 4 cut(s) 136, 446, 490, 597
BstMWI GCNNNNNNNGC 1 cut(s) 335
BstNI CCWGG 2 cut(s) 458, 593
BstSCI CCNGG 2 cut(s) 456, 591
BstUI CGCG 1 cut(s) 393
BstV1I GCAGC 2 cut(s) 123, 325
BtsCI GGATG 1 cut(s) 298
BtsI GCAGTG 2 cut(s) 32, 574
BtsIMutI CAGTG 2 cut(s) 32, 574
Cac8I GCNNGC 1 cut(s) 442
CaiI CAGNNNCTG 1 cut(s) 463
CfoI GCGC 1 cut(s) 172
Cfr10I RCCGGY 2 cut(s) 230, 469
Cfr13I GGNCC 1 cut(s) 355
CseI GACGC 1 cut(s) 382
Csp6I GTAC 2 cut(s) 479, 555
CviAII CATG 3 cut(s) 157, 407, 569
CviJI RGCY 8 cut(s) 18, 55, 63, 230, 319, 338, 424, 469
CviKI_1 RGCY 8 cut(s) 18, 55, 63, 230, 319, 338, 424, 469
CviQI GTAC 2 cut(s) 479, 555
DdeI CTNAG 1 cut(s) 56
DpnI GATC 4 cut(s) 138, 448, 492, 599
DpnII GATC 4 cut(s) 136, 446, 490, 597
DraIII CACNNNGTG 1 cut(s) 127
Eco130I CCWWGG 1 cut(s) 220
Eco47I GGWCC 1 cut(s) 355
Eco57I CTGAAG 1 cut(s) 660
EcoRII CCWGG 2 cut(s) 456, 591
EcoT14I CCWWGG 1 cut(s) 220
ErhI CCWWGG 1 cut(s) 220
FaeI CATG 3 cut(s) 160, 410, 572
FaiI YATR 9 cut(s) 47, 116, 118, 158, 246, 278, 408, 570, 632
FaqI GGGAC 1 cut(s) 597
FatI CATG 3 cut(s) 156, 406, 568
FauNDI CATATG 1 cut(s) 116
Fnu4HI GCNGC 3 cut(s) 112, 339, 342
FokI GGATG 1 cut(s) 285
Fsp4HI GCNGC 3 cut(s) 112, 339, 342
FspBI CTAG 1 cut(s) 420
GlaI GCGC 1 cut(s) 171
GluI GCNGC 3 cut(s) 112, 339, 342
GsuI CTGGAG 2 cut(s) 485, 614
HapII CCGG 3 cut(s) 231, 287, 470
HgaI GACGC 1 cut(s) 382
HhaI GCGC 1 cut(s) 172
Hin1II CATG 3 cut(s) 160, 410, 572
Hin6I GCGC 1 cut(s) 170
HinP1I GCGC 1 cut(s) 170
HpaII CCGG 3 cut(s) 231, 287, 470
HphI GGTGA 2 cut(s) 380, 484
Hpy166II GTNNAC 3 cut(s) 355, 557, 574
Hpy188I TCNGA 4 cut(s) 92, 141, 315, 398
Hpy188III TCNNGA 3 cut(s) 205, 464, 674
Hpy8I GTNNAC 3 cut(s) 355, 557, 574
Hpy99I CGWCG 1 cut(s) 398
HpyCH4III ACNGT 2 cut(s) 125, 478
HpyCH4IV ACGT 2 cut(s) 27, 191
HpyCH4V TGCA 3 cut(s) 37, 111, 579
HpyF10VI GCNNNNNNNGC 1 cut(s) 335
HpyF3I CTNAG 1 cut(s) 56
HpySE526I ACGT 2 cut(s) 27, 191
Hsp92II CATG 3 cut(s) 160, 410, 572
HspAI GCGC 1 cut(s) 170
Kzo9I GATC 4 cut(s) 136, 446, 490, 597
LmnI GCTCC 1 cut(s) 466
Lsp1109I GCAGC 2 cut(s) 123, 325
LweI GCATC 2 cut(s) 316, 475
MaeI CTAG 1 cut(s) 420
MaeII ACGT 2 cut(s) 27, 191
MaeIII GTNAC 4 cut(s) 23, 187, 472, 649
MalI GATC 4 cut(s) 138, 448, 492, 599
MboI GATC 4 cut(s) 136, 446, 490, 597
MboII GAAGA 4 cut(s) 220, 302, 653, 656
MluCI AATT 1 cut(s) 427
MmeI TCCRAC 1 cut(s) 376
MnlI CCTC 6 cut(s) 53, 64, 67, 90, 328, 355
MroXI GAANNNNTTC 2 cut(s) 320, 384
MspI CCGG 3 cut(s) 231, 287, 470
MspR9I CCNGG 2 cut(s) 458, 593
MvaI CCWGG 2 cut(s) 458, 593
MvnI CGCG 1 cut(s) 393
MwoI GCNNNNNNNGC 1 cut(s) 335
NdeI CATATG 1 cut(s) 116
NdeII GATC 4 cut(s) 136, 446, 490, 597
NlaIII CATG 3 cut(s) 160, 410, 572
NlaIV GGNNCC 3 cut(s) 122, 357, 468
NmuCI GTSAC 3 cut(s) 23, 472, 649
PdmI GAANNNNTTC 2 cut(s) 320, 384
PflMI CCANNNNNTGG 1 cut(s) 463
PkrI GCNGC 3 cut(s) 113, 340, 343
Ppu21I YACGTR 1 cut(s) 28
Psp1406I AACGTT 1 cut(s) 191
Psp6I CCWGG 2 cut(s) 456, 591
PspGI CCWGG 2 cut(s) 456, 591
PspN4I GGNNCC 3 cut(s) 122, 357, 468
PspPI GGNCC 1 cut(s) 355
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstNI CAGNNNCTG 1 cut(s) 463
RsaI GTAC 2 cut(s) 480, 556
RsaNI GTAC 2 cut(s) 479, 555
SatI GCNGC 3 cut(s) 112, 339, 342
Sau3AI GATC 4 cut(s) 136, 446, 490, 597
Sau96I GGNCC 1 cut(s) 355
ScaI AGTACT 1 cut(s) 480
ScrFI CCNGG 2 cut(s) 458, 593
SetI ASST 8 cut(s) 20, 30, 57, 101, 194, 321, 609, 671
SfaNI GCATC 2 cut(s) 316, 475
SinI GGWCC 1 cut(s) 355
SmlI CTYRAG 1 cut(s) 269
SmoI CTYRAG 1 cut(s) 269
Sse9I AATT 1 cut(s) 427
SsiI CCGC 2 cut(s) 342, 391
SspMI CTAG 1 cut(s) 420
StyD4I CCNGG 2 cut(s) 456, 591
StyI CCWWGG 1 cut(s) 220
TaaI ACNGT 2 cut(s) 125, 478
TaiI ACGT 2 cut(s) 30, 194
TaqI TCGA 3 cut(s) 324, 483, 665
TasI AATT 1 cut(s) 427
TatI WGTACW 2 cut(s) 478, 554
TauI GCSGC 1 cut(s) 344
TscAI CASTG 2 cut(s) 39, 581
TseFI GTSAC 3 cut(s) 23, 472, 649
TseI GCWGC 2 cut(s) 111, 338
Tsp45I GTSAC 3 cut(s) 23, 472, 649
TspDTI ATGAA 7 cut(s) 173, 244, 261, 309, 421, 426, 557
TspRI CASTG 2 cut(s) 39, 581
Van91I CCANNNNNTGG 1 cut(s) 463
VpaK11BI GGWCC 1 cut(s) 355
XmnI GAANNNNTTC 2 cut(s) 320, 384
XspI CTAG 1 cut(s) 420
ZrmI AGTACT 1 cut(s) 480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.