Rorug02G0582300

ubiquitin-protein transferase activity

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
70593414 .. 70598315
4902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0582300.1

Sequence Viewer

Length: 1632 bp
ATGGGTGGTTGTGTGTCAACCCCATCTAAAACGATTAAATCAAAGAAAAAAAGCCGTAGGGGCAGCAAATTCCATGGAAAGATAAATGGTACTAAGAAGAAGAATAGTGATGGAGGAGCTCGAGTAGCAGATTATTCTGTCAGCGAGTTTGTCCATATGGGGTTTGAGAATGGTGCAACAGCTACTTGCACAAGGTCCAAGGTTTCTAATTCAAAATTCCATCTCACGGAGCTGCAATGGCACCACACTCCATCTAATGCGAATGCCATTTGCCAAGATGAATCTTGGTTTGACTCCATCAGTGTACTGGAATCTGAATCAGATGACGACTATGTTAGTTTACATGGAGATAGTTTTCCATTAGTGGGCAATGCAATTGGGAATATCCCTGGTGGTCAAGTACTTCAGTATGAAAGGTCTTCATGCTTTGTTGATAATGGGTGCAAGTATGAAGAATACCAGAGCTATACAAAAATAGATGGAGGTAAACTCATGGGCAAAGATGAACACAGGGATTCAAATCGGTTTCCCCGTACTAGTATCCAGGGCTTAGACAGGAAGAAGATGCTAGACCAATCTCGTGGAAGCTTTAAAGGACTGAGAGAGGATCGACGTGATTCTAATGAGAAATCTGGCTTAGCTCGATTAATACATTCTCTAAGTTTCAATGATAAGAATCTACATGCACAAACACCCTCTCAAAGAAAGCCATCAACAGTTTTCAGGGTTTCTTTTAAGAGGAGGTCCTGTGATGCAGAAGAAAACAATGAACAATATCAATCAAAAAGGTTTCTGAGTCTGCCTAGAGCAGGACTTGTCATTCCCTGTTGTAAAGGAGAGAAGATGACTCCAGGATGTTGGTCTGAGATTCCACCCTCCAATTTCAAACTCCGTGGCGAGAACTATTTCAAAGATAAAAAAAAGGCACCTGCTGCGAACTACAGTCCCTATACTCCAATTGGTGTTGATCTATTTGTCTGCCCCAAAAAGATACATCACATTGCTCAATATCTCGAGCTTCCAAAAGTAAATGCAGATGTAAAAGTGCCTCCACTCCTCATTGTAAATATACAGTTGCCTACTTATCCAGCTGCCATGTTCCTTGGTGATAGTGATGGAGAGGGGATGAGTCTTGTACTGTATTTTAAAGTTTCAGAGAATTTTGATAGAGACATCTCTCCCCAGTTCCAGGAAAGCATCAAGAAAATGGTTGAAGATGAAACAGAAAAGATCAAAGGATTTGCAAAGGATTCGACTGTACCTTTTAGAGAAAGGCTAAAGATCTTGGCTGGGGTGGTTAATCCTGATGAACTCAATCTGAGTTCTGCCGAAAAGAAGCTTTTACATGCATATAATGATAAACCAGTACTTTCACGCCCCCAGCACGAATTTTATAGGGGTCCTAATTATTTTGAGATTGATCTGGACATTCATCGGTTCAGCTACCTTCCTCGGAAGGGACTTGAATCTTTTAGAGAACGTCTGCAAAATGGAATACTAGATATGGGTTTAACTATCCAGGCACAGAAACAGGAAGAGTTGCCGGAGCAAGTGCTGTGCTGTATGAGACTGAACAAGATTGATTTTGTTGATCATGGTCAAATACCAAGTCTGGTCACTAATGATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

543

Amino Acids

61.43

Weight (kDa)

8.69

Isoelectric Point (pI)

43.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR2_C PF07059 287 - 528 4.7e-64 Protein ENHANCED DISEASE RESISTANCE 2, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 937
Acc36I ACCTGC 1 cut(s) 937
AccB1I GGYRCC 2 cut(s) 240, 925
AclWI GGATC 1 cut(s) 615
AcsI RAATTY 4 cut(s) 68, 215, 1159, 1388
AcuI CTGAAG 1 cut(s) 389
AfaI GTAC 7 cut(s) 91, 306, 402, 535, 1137, 1260, 1368
AfiI CCNNNNNNNGG 5 cut(s) 226, 365, 809, 1189, 1457
AgsI TTSAA 7 cut(s) 213, 519, 667, 886, 910, 1214, 1466
AhlI ACTAGT 1 cut(s) 536
AjiI CACGTC 1 cut(s) 614
AjnI CCWGG 5 cut(s) 388, 543, 850, 1188, 1518
Alw21I GWGCWC 1 cut(s) 121
Alw26I GTCTC 2 cut(s) 1164, 1561
AlwI GGATC 1 cut(s) 615
Ama87I CYCGRG 2 cut(s) 120, 1013
ApeKI GCWGC 4 cut(s) 63, 232, 932, 1091
ApoI RAATTY 4 cut(s) 68, 215, 1159, 1388
ArsI GACNNNNNNTTYG 2 cut(s) 1594, 1626
AseI ATTAAT 1 cut(s) 647
Asp700I GAANNNNTTC 1 cut(s) 905
AspS9I GGNCC 3 cut(s) 195, 744, 1400
AsuHPI GGTGA 1 cut(s) 1118
AvaI CYCGRG 2 cut(s) 120, 1013
AvaII GGWCC 3 cut(s) 195, 744, 1400
BanI GGYRCC 2 cut(s) 240, 925
BanII GRGCYC 1 cut(s) 121
BauI CACGAG 1 cut(s) 579
BbsI GAAGAC 1 cut(s) 411
Bbv12I GWGCWC 1 cut(s) 121
BbvI GCAGC 4 cut(s) 75, 219, 919, 1078
BccI CCATC 8 cut(s) 31, 104, 228, 259, 305, 473, 718, 1109
BceAI ACGGC 1 cut(s) 39
BcgI CGANNNNNNTGC 2 cut(s) 1233, 1267
BciT130I CCWGG 5 cut(s) 390, 545, 852, 1190, 1520
BciVI GTATCC 1 cut(s) 551
BclI TGATCA 1 cut(s) 1591
BcoDI GTCTC 2 cut(s) 1164, 1561
BcuI ACTAGT 1 cut(s) 536
BfaI CTAG 4 cut(s) 537, 569, 804, 1499
BfmI CTRYAG 1 cut(s) 940
BfuAI ACCTGC 1 cut(s) 937
BfuI GTATCC 1 cut(s) 551
BglI GCCNNNNNGGC 1 cut(s) 60
BglII AGATCT 1 cut(s) 1281
BisI GCNGC 4 cut(s) 64, 233, 933, 1092
BlpI GCTNAGC 1 cut(s) 637
BlsI GCNGC 4 cut(s) 65, 234, 934, 1093
BmcAI AGTACT 2 cut(s) 402, 1368
Bme1390I CCNGG 5 cut(s) 390, 545, 852, 1190, 1520
Bme18I GGWCC 3 cut(s) 195, 744, 1400
BmeT110I CYCGRG 2 cut(s) 120, 1013
BmgBI CACGTC 1 cut(s) 614
BmgT120I GGNCC 3 cut(s) 195, 744, 1400
BmiI GGNNCC 3 cut(s) 242, 927, 1401
BmrFI CCNGG 5 cut(s) 390, 545, 852, 1190, 1520
BmrI ACTGGG 1 cut(s) 1177
BmsI GCATC 3 cut(s) 555, 742, 1206
BmuI ACTGGG 1 cut(s) 1177
BpiI GAAGAC 1 cut(s) 411
BplI GAGNNNNNCTC 2 cut(s) 474, 506
BpmI CTGGAG 1 cut(s) 834
Bpu1102I GCTNAGC 1 cut(s) 637
BsaBI GATNNNNATC 2 cut(s) 519, 675
BsaJI CCNNGG 7 cut(s) 73, 198, 388, 544, 892, 1102, 1451
BsaXI ACNNNNNCTCC 4 cut(s) 108, 138, 733, 763
Bsc4I CCNNNNNNNGG 5 cut(s) 226, 365, 809, 1189, 1457
Bse1I ACTGG 3 cut(s) 312, 1183, 1364
Bse3DI GCAATG 3 cut(s) 242, 376, 999
Bse8I GATNNNNATC 2 cut(s) 519, 675
BseBI CCWGG 5 cut(s) 390, 545, 852, 1190, 1520
BseDI CCNNGG 7 cut(s) 73, 198, 388, 544, 892, 1102, 1451
BseGI GGATG 2 cut(s) 860, 1131
BseJI GATNNNNATC 2 cut(s) 519, 675
BseLI CCNNNNNNNGG 5 cut(s) 226, 365, 809, 1189, 1457
BseMI GCAATG 3 cut(s) 242, 376, 999
BseMII CTCAG 4 cut(s) 590, 785, 855, 1310
BseNI ACTGG 3 cut(s) 312, 1183, 1364
BseRI GAGGAG 3 cut(s) 129, 754, 1046
BseXI GCAGC 4 cut(s) 75, 219, 919, 1078
BseYI CCCAGC 2 cut(s) 1289, 1380
BshNI GGYRCC 2 cut(s) 240, 925
BsiHKAI GWGCWC 1 cut(s) 121
BsiHKCI CYCGRG 2 cut(s) 120, 1013
BsiSI CCGG 1 cut(s) 1544
BslFI GGGAC 2 cut(s) 930, 1473
BslI CCNNNNNNNGG 5 cut(s) 226, 365, 809, 1189, 1457
BsmAI GTCTC 2 cut(s) 1164, 1561
BsmFI GGGAC 2 cut(s) 930, 1473
BsmI GAATGC 1 cut(s) 268
BsoBI CYCGRG 2 cut(s) 120, 1013
Bsp1286I GDGCHC 1 cut(s) 121
Bsp143I GATC 6 cut(s) 607, 967, 1230, 1281, 1420, 1591
Bsp1720I GCTNAGC 1 cut(s) 637
Bsp19I CCATGG 1 cut(s) 73
BspCNI CTCAG 4 cut(s) 591, 786, 856, 1311
BspLI GGNNCC 3 cut(s) 242, 927, 1401
BspMI ACCTGC 1 cut(s) 937
BspPI GGATC 1 cut(s) 615
BspT107I GGYRCC 2 cut(s) 240, 925
BsrDI GCAATG 3 cut(s) 242, 376, 999
BsrI ACTGG 3 cut(s) 312, 1183, 1364
BssECI CCNNGG 7 cut(s) 73, 198, 388, 544, 892, 1102, 1451
BssMI GATC 6 cut(s) 607, 967, 1230, 1281, 1420, 1591
BssSI CACGAG 1 cut(s) 579
BssT1I CCWWGG 3 cut(s) 73, 198, 1102
Bst2BI CACGAG 1 cut(s) 579
Bst2UI CCWGG 5 cut(s) 390, 545, 852, 1190, 1520
Bst4CI ACNGT 5 cut(s) 718, 944, 1074, 1140, 1258
Bst6I CTCTTC 1 cut(s) 1530
BstAPI GCANNNNNTGC 1 cut(s) 932
BstDEI CTNAG 8 cut(s) 93, 550, 599, 637, 659, 794, 864, 1319
BstDSI CCRYGG 2 cut(s) 73, 892
BstENI CCTNNNNNAGG 1 cut(s) 807
BstF5I GGATG 2 cut(s) 860, 1131
BstKTI GATC 6 cut(s) 610, 970, 1233, 1284, 1423, 1594
BstMAI GTCTC 2 cut(s) 1164, 1561
BstMBI GATC 6 cut(s) 607, 967, 1230, 1281, 1420, 1591
BstMWI GCNNNNNNNGC 4 cut(s) 60, 125, 238, 932
BstNI CCWGG 5 cut(s) 390, 545, 852, 1190, 1520
BstNSI RCATGY 2 cut(s) 686, 1349
BstSCI CCNGG 5 cut(s) 388, 543, 850, 1188, 1518
BstSFI CTRYAG 1 cut(s) 940
BstV1I GCAGC 4 cut(s) 75, 219, 919, 1078
BstV2I GAAGAC 1 cut(s) 411
BstX2I RGATCY 1 cut(s) 1281
BstXI CCANNNNNNTGG 2 cut(s) 581, 858
BstYI RGATCY 1 cut(s) 1281
BsuI GTATCC 1 cut(s) 551
BtgI CCRYGG 2 cut(s) 73, 892
BtrI CACGTC 1 cut(s) 614
BtsCI GGATG 2 cut(s) 860, 1131
BtsIMutI CAGTG 1 cut(s) 307
BveI ACCTGC 1 cut(s) 937
Cfr13I GGNCC 3 cut(s) 195, 744, 1400
Csp6I GTAC 7 cut(s) 90, 305, 401, 534, 1136, 1259, 1367
CspCI CAANNNNNGTGG 2 cut(s) 874, 909
CviAII CATG 8 cut(s) 74, 344, 423, 493, 683, 1096, 1346, 1595
CviQI GTAC 7 cut(s) 90, 305, 401, 534, 1136, 1259, 1367
DdeI CTNAG 8 cut(s) 93, 550, 599, 637, 659, 794, 864, 1319
DpnI GATC 6 cut(s) 609, 969, 1232, 1283, 1422, 1593
DpnII GATC 6 cut(s) 607, 967, 1230, 1281, 1420, 1591
DraI TTTAAA 2 cut(s) 592, 1147
Eam1104I CTCTTC 1 cut(s) 1530
EarI CTCTTC 1 cut(s) 1530
Ecl136II GAGCTC 1 cut(s) 119
Eco130I CCWWGG 3 cut(s) 73, 198, 1102
Eco24I GRGCYC 1 cut(s) 121
Eco47I GGWCC 3 cut(s) 195, 744, 1400
Eco53kI GAGCTC 1 cut(s) 119
Eco57I CTGAAG 1 cut(s) 389
Eco88I CYCGRG 2 cut(s) 120, 1013
EcoICRI GAGCTC 1 cut(s) 119
EcoNI CCTNNNNNAGG 1 cut(s) 807
EcoO109I RGGNCCY 2 cut(s) 744, 1400
EcoRII CCWGG 5 cut(s) 388, 543, 850, 1188, 1518
EcoT14I CCWWGG 3 cut(s) 73, 198, 1102
EcoT22I ATGCAT 1 cut(s) 1351
EcoT38I GRGCYC 1 cut(s) 121
ErhI CCWWGG 3 cut(s) 73, 198, 1102
FaeI CATG 8 cut(s) 77, 347, 426, 496, 686, 1099, 1349, 1598
FaqI GGGAC 2 cut(s) 930, 1473
FatI CATG 8 cut(s) 73, 343, 422, 492, 682, 1095, 1345, 1594
FauNDI CATATG 1 cut(s) 156
FbaI TGATCA 1 cut(s) 1591
Fnu4HI GCNGC 4 cut(s) 64, 233, 933, 1092
FokI GGATG 2 cut(s) 867, 1138
FriOI GRGCYC 1 cut(s) 121
Fsp4HI GCNGC 4 cut(s) 64, 233, 933, 1092
FspBI CTAG 4 cut(s) 537, 569, 804, 1499
GluI GCNGC 4 cut(s) 64, 233, 933, 1092
GsaI CCCAGC 2 cut(s) 1293, 1384
GsuI CTGGAG 1 cut(s) 834
HapII CCGG 1 cut(s) 1544
Hin1II CATG 8 cut(s) 77, 347, 426, 496, 686, 1099, 1349, 1598
HincII GTYRAC 1 cut(s) 18
HindII GTYRAC 1 cut(s) 18
HindIII AAGCTT 2 cut(s) 586, 1337
HpaII CCGG 1 cut(s) 1544
HphI GGTGA 1 cut(s) 1118
Hpy166II GTNNAC 4 cut(s) 18, 305, 341, 488
Hpy188I TCNGA 7 cut(s) 316, 322, 795, 865, 1156, 1320, 1455
Hpy188III TCNNGA 4 cut(s) 1013, 1201, 1304, 1424
Hpy8I GTNNAC 4 cut(s) 18, 305, 341, 488
Hpy99I CGWCG 1 cut(s) 615
HpyAV CCTTC 2 cut(s) 1450, 1457
HpyCH4III ACNGT 5 cut(s) 718, 944, 1074, 1140, 1258
HpyCH4IV ACGT 2 cut(s) 613, 1480
HpyF10VI GCNNNNNNNGC 4 cut(s) 60, 125, 238, 932
HpyF3I CTNAG 8 cut(s) 93, 550, 599, 637, 659, 794, 864, 1319
HpySE526I ACGT 2 cut(s) 613, 1480
Hsp92II CATG 8 cut(s) 77, 347, 426, 496, 686, 1099, 1349, 1598
Ksp22I TGATCA 1 cut(s) 1591
Kzo9I GATC 6 cut(s) 607, 967, 1230, 1281, 1420, 1591
LmnI GCTCC 3 cut(s) 116, 229, 1546
Lsp1109I GCAGC 4 cut(s) 75, 219, 919, 1078
LweI GCATC 3 cut(s) 555, 742, 1206
MaeI CTAG 4 cut(s) 537, 569, 804, 1499
MaeII ACGT 2 cut(s) 613, 1480
MaeIII GTNAC 1 cut(s) 1615
MalI GATC 6 cut(s) 609, 969, 1232, 1283, 1422, 1593
MboI GATC 6 cut(s) 607, 967, 1230, 1281, 1420, 1591
MfeI CAATTG 2 cut(s) 375, 957
MflI RGATCY 1 cut(s) 1281
MhlI GDGCHC 1 cut(s) 121
MluCI AATT 9 cut(s) 68, 208, 215, 375, 880, 957, 1159, 1388, 1405
MlyI GAGTC 4 cut(s) 287, 805, 841, 1138
Mph1103I ATGCAT 1 cut(s) 1351
MroXI GAANNNNTTC 1 cut(s) 905
MseI TTAA 7 cut(s) 36, 591, 647, 735, 1146, 1299, 1511
MspA1I CMGCKG 1 cut(s) 1091
MspI CCGG 1 cut(s) 1544
MspR9I CCNGG 5 cut(s) 390, 545, 852, 1190, 1520
MunI CAATTG 2 cut(s) 375, 957
Mva1269I GAATGC 1 cut(s) 268
MvaI CCWGG 5 cut(s) 390, 545, 852, 1190, 1520
MwoI GCNNNNNNNGC 4 cut(s) 60, 125, 238, 932
NcoI CCATGG 1 cut(s) 73
NdeI CATATG 1 cut(s) 156
NdeII GATC 6 cut(s) 607, 967, 1230, 1281, 1420, 1591
NlaIII CATG 8 cut(s) 77, 347, 426, 496, 686, 1099, 1349, 1598
NlaIV GGNNCC 3 cut(s) 242, 927, 1401
NmuCI GTSAC 1 cut(s) 1615
NsiI ATGCAT 1 cut(s) 1351
NspI RCATGY 2 cut(s) 686, 1349
PaeR7I CTCGAG 2 cut(s) 120, 1013
PaqCI CACCTGC 1 cut(s) 937
PcsI WCGNNNNNNNCGW 1 cut(s) 529
PctI GAATGC 1 cut(s) 268
PdmI GAANNNNTTC 1 cut(s) 905
PfeI GAWTC 9 cut(s) 281, 311, 317, 515, 617, 676, 868, 1250, 1466
PfoI TCCNGGA 2 cut(s) 850, 1188
PkrI GCNGC 4 cut(s) 65, 234, 934, 1093
PleI GAGTC 4 cut(s) 287, 804, 841, 1137
PpsI GAGTC 4 cut(s) 287, 804, 841, 1137
PpuMI RGGWCCY 2 cut(s) 744, 1400
PshBI ATTAAT 1 cut(s) 647
Psp124BI GAGCTC 1 cut(s) 121
Psp5II RGGWCCY 2 cut(s) 744, 1400
Psp6I CCWGG 5 cut(s) 388, 543, 850, 1188, 1518
PspFI CCCAGC 2 cut(s) 1289, 1380
PspGI CCWGG 5 cut(s) 388, 543, 850, 1188, 1518
PspN4I GGNNCC 3 cut(s) 242, 927, 1401
PspPI GGNCC 3 cut(s) 195, 744, 1400
PspPPI RGGWCCY 2 cut(s) 744, 1400
PspXI VCTCGAGB 1 cut(s) 120
PsuI RGATCY 1 cut(s) 1281
PvuII CAGCTG 1 cut(s) 1091
RsaI GTAC 7 cut(s) 91, 306, 402, 535, 1137, 1260, 1368
RsaNI GTAC 7 cut(s) 90, 305, 401, 534, 1136, 1259, 1367
SacI GAGCTC 1 cut(s) 121
SaqAI TTAA 7 cut(s) 36, 591, 647, 735, 1146, 1299, 1511
SatI GCNGC 4 cut(s) 64, 233, 933, 1092
Sau3AI GATC 6 cut(s) 607, 967, 1230, 1281, 1420, 1591
Sau96I GGNCC 3 cut(s) 195, 744, 1400
ScaI AGTACT 2 cut(s) 402, 1368
SchI GAGTC 4 cut(s) 287, 805, 841, 1138
ScrFI CCNGG 5 cut(s) 390, 545, 852, 1190, 1520
SduI GDGCHC 1 cut(s) 121
SfaNI GCATC 3 cut(s) 555, 742, 1206
SfcI CTRYAG 1 cut(s) 940
Sfr274I CTCGAG 2 cut(s) 120, 1013
SinI GGWCC 3 cut(s) 195, 744, 1400
SlaI CTCGAG 2 cut(s) 120, 1013
SmlI CTYRAG 2 cut(s) 120, 1013
SmoI CTYRAG 2 cut(s) 120, 1013
SpeI ACTAGT 1 cut(s) 536
Sse9I AATT 9 cut(s) 68, 208, 215, 375, 880, 957, 1159, 1388, 1405
SspMI CTAG 4 cut(s) 537, 569, 804, 1499
SstI GAGCTC 1 cut(s) 121
StyD4I CCNGG 5 cut(s) 388, 543, 850, 1188, 1518
StyI CCWWGG 3 cut(s) 73, 198, 1102
TaaI ACNGT 5 cut(s) 718, 944, 1074, 1140, 1258
TaiI ACGT 2 cut(s) 616, 1483
TaqI TCGA 5 cut(s) 121, 610, 643, 1014, 1253
TasI AATT 9 cut(s) 68, 208, 215, 375, 880, 957, 1159, 1388, 1405
TatI WGTACW 4 cut(s) 304, 400, 1135, 1366
TfiI GAWTC 9 cut(s) 281, 311, 317, 515, 617, 676, 868, 1250, 1466
Tru1I TTAA 7 cut(s) 36, 591, 647, 735, 1146, 1299, 1511
Tru9I TTAA 7 cut(s) 36, 591, 647, 735, 1146, 1299, 1511
TscAI CASTG 1 cut(s) 307
TseFI GTSAC 1 cut(s) 1615
TseI GCWGC 4 cut(s) 63, 232, 932, 1091
Tsp45I GTSAC 1 cut(s) 1615
TspDTI ATGAA 9 cut(s) 294, 411, 426, 465, 519, 783, 1233, 1323, 1421
TspGWI ACGGA 2 cut(s) 242, 881
TspRI CASTG 1 cut(s) 307
VpaK11BI GGWCC 3 cut(s) 195, 744, 1400
VspI ATTAAT 1 cut(s) 647
XagI CCTNNNNNAGG 1 cut(s) 807
XapI RAATTY 4 cut(s) 68, 215, 1159, 1388
XceI RCATGY 2 cut(s) 686, 1349
XcmI CCANNNNNNNNNTGG 1 cut(s) 304
XhoI CTCGAG 2 cut(s) 120, 1013
XmnI GAANNNNTTC 1 cut(s) 905
XspI CTAG 4 cut(s) 537, 569, 804, 1499
ZrmI AGTACT 2 cut(s) 402, 1368
Zsp2I ATGCAT 1 cut(s) 1351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.