Rorug03G0238200

ubiquitin-protein transferase activity

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
22167491 .. 22170463
2973 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0238200.1

Sequence Viewer

Length: 879 bp
ATGGTAGTAAATTTTGGCACAATTTTTGTTAAAAAAAAAAAGTGTAAACAAAAACAAATACCCGCCAAAACCCAAGGGGACAAATCACGACGCAGGTACATATCACAGGGTGCGAGAGACGAAATGAAGAGAGCCCTGCGATTCAAACGAGTCGCCGCTAAAACCCCCAAGCGGCCAACACTCTCAAACCGACCCAGCGATGACGACGACGACCAAACTCCGCCGAGTCAACCCCAACCCGACTCAACTCCAATCCCAGAGATTCCTGCGGATAAAATGACCATCTTGCCCTACACATTCTTCCAGATTGACGCCCTAGACCTCGCCCCGCGTTTGCTCGGCAAGTTCCTTAGGAGAGACGATGTTGTTCTTCAGATTACTGAGGTAGAAGCTTATAGACCAAATGATTCGGCTTGTCACGGTCGATTTGGCATAACGACAAGAACGGCCCCTGTTTTTGGACCAGGAGGGCATGCATATGTTTATCTTTGCTATGGTCTTCATTCAATGCTGAATGTTGTTGCTGACAAGGAGGGAGTTGGGGCGGCTGTCCTAATACGTGCTTGCGCTCCAATTAGTGGATTGGAGACCATACAGCAACGTCGAGGGCAGAAGACTAGTAAGCCTGTTCTCCTTAGTGGACCAGGAAAGATCGGTCAAGCCCTGGGACTTTCTACAGAATGGTCTAACCACCCCCTCTACACTCCTGGTGGTCTGGAAATCTTAGATGGTCCCCAGCCTGAAAACATGTTGATTGGTCCGCGTGTAGGCATCAACTATGCTTTGCCTGAGCACGTCAATGCGTTGTGGAGATTTGCAATTGCAGGTACCCCTTGGATAAGTGCTCCGAAGAACACTCTCAGGCCACCGTCATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

292

Amino Acids

32.11

Weight (kDa)

9.74

Isoelectric Point (pI)

48.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pur_DNA_glyco PF02245 100 - 277 1.6e-52 Methylpurine-DNA glycosylase (MPG)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 84, 815
Acc65I GGTACC 1 cut(s) 827
AccB1I GGYRCC 1 cut(s) 827
AccB7I CCANNNNNTGG 1 cut(s) 578
AccII CGCG 2 cut(s) 331, 763
AciI CCGC 8 cut(s) 63, 156, 172, 221, 269, 329, 545, 761
AcoI YGGCCR 1 cut(s) 173
AcsI RAATTY 1 cut(s) 10
AcuI CTGAAG 1 cut(s) 356
AcyI GRCGYC 1 cut(s) 312
AdeI CACNNNGTG 1 cut(s) 110
AfaI GTAC 2 cut(s) 98, 829
AfiI CCNNNNNNNGG 4 cut(s) 171, 458, 578, 767
AflIII ACRYGT 1 cut(s) 747
AgsI TTSAA 2 cut(s) 145, 507
AhlI ACTAGT 1 cut(s) 617
AjiI CACGTC 1 cut(s) 796
AjnI CCWGG 4 cut(s) 463, 643, 663, 706
AluBI AGCT 1 cut(s) 392
AluI AGCT 1 cut(s) 392
Alw21I GWGCWC 2 cut(s) 795, 847
Alw26I GTCTC 3 cut(s) 111, 351, 581
AoxI GGCC 3 cut(s) 173, 447, 863
ApoI RAATTY 1 cut(s) 10
Asp718I GGTACC 1 cut(s) 827
AspLEI GCGC 1 cut(s) 569
AspS9I GGNCC 5 cut(s) 448, 461, 641, 731, 758
AvaII GGWCC 4 cut(s) 461, 641, 731, 758
AxyI CCTNAGG 1 cut(s) 350
BanI GGYRCC 1 cut(s) 827
BanII GRGCYC 1 cut(s) 136
BbsI GAAGAC 2 cut(s) 491, 620
Bbv12I GWGCWC 2 cut(s) 795, 847
BccI CCATC 2 cut(s) 290, 722
BceAI ACGGC 1 cut(s) 462
BciT130I CCWGG 4 cut(s) 465, 645, 665, 708
BcoDI GTCTC 3 cut(s) 111, 351, 581
BcuI ACTAGT 1 cut(s) 617
BfaI CTAG 2 cut(s) 317, 618
BfmI CTRYAG 1 cut(s) 675
BfuAI ACCTGC 2 cut(s) 84, 815
BisI GCNGC 3 cut(s) 156, 173, 546
BlsI GCNGC 3 cut(s) 157, 174, 547
Bme1390I CCNGG 4 cut(s) 465, 645, 665, 708
Bme18I GGWCC 4 cut(s) 461, 641, 731, 758
BmgBI CACGTC 1 cut(s) 796
BmgT120I GGNCC 5 cut(s) 448, 461, 641, 731, 758
BmiI GGNNCC 3 cut(s) 450, 733, 829
BmrFI CCNGG 4 cut(s) 465, 645, 665, 708
BmsI GCATC 1 cut(s) 780
BpiI GAAGAC 2 cut(s) 491, 620
Bpu10I CCTNAGC 1 cut(s) 789
BsaAI YACGTR 1 cut(s) 560
BsaHI GRCGYC 1 cut(s) 312
BsaI GGTCTC 1 cut(s) 581
BsaJI CCNNGG 4 cut(s) 73, 663, 664, 833
Bsc4I CCNNNNNNNGG 4 cut(s) 171, 458, 578, 767
Bse21I CCTNAGG 1 cut(s) 350
BseBI CCWGG 4 cut(s) 465, 645, 665, 708
BseDI CCNNGG 4 cut(s) 73, 663, 664, 833
BseLI CCNNNNNNNGG 4 cut(s) 171, 458, 578, 767
BseMII CTCAG 3 cut(s) 372, 780, 874
BseYI CCCAGC 2 cut(s) 194, 735
Bsh1236I CGCG 2 cut(s) 331, 763
Bsh1285I CGRYCG 1 cut(s) 424
BshFI GGCC 3 cut(s) 175, 449, 865
BshNI GGYRCC 1 cut(s) 827
BsiEI CGRYCG 1 cut(s) 424
BsiHKAI GWGCWC 2 cut(s) 795, 847
BslFI GGGAC 3 cut(s) 92, 681, 717
BslI CCNNNNNNNGG 4 cut(s) 171, 458, 578, 767
BsmAI GTCTC 3 cut(s) 111, 351, 581
BsmBI CGTCTC 2 cut(s) 111, 351
BsmFI GGGAC 3 cut(s) 92, 681, 717
BsnI GGCC 3 cut(s) 175, 449, 865
Bso31I GGTCTC 1 cut(s) 581
Bsp1286I GDGCHC 3 cut(s) 136, 795, 847
Bsp143I GATC 1 cut(s) 651
BspACI CCGC 8 cut(s) 63, 156, 172, 221, 269, 329, 545, 761
BspANI GGCC 3 cut(s) 175, 449, 865
BspCNI CTCAG 3 cut(s) 373, 781, 873
BspFNI CGCG 2 cut(s) 331, 763
BspLI GGNNCC 3 cut(s) 450, 733, 829
BspMI ACCTGC 2 cut(s) 84, 815
BspT107I GGYRCC 1 cut(s) 827
BspTNI GGTCTC 1 cut(s) 581
BssECI CCNNGG 4 cut(s) 73, 663, 664, 833
BssMI GATC 1 cut(s) 651
BssNI GRCGYC 1 cut(s) 312
BssT1I CCWWGG 2 cut(s) 73, 833
Bst2UI CCWGG 4 cut(s) 465, 645, 665, 708
Bst4CI ACNGT 2 cut(s) 422, 870
Bst6I CTCTTC 1 cut(s) 122
BstACI GRCGYC 1 cut(s) 312
BstBAI YACGTR 1 cut(s) 560
BstC8I GCNNGC 2 cut(s) 474, 565
BstDEI CTNAG 6 cut(s) 350, 381, 635, 724, 789, 860
BstFNI CGCG 2 cut(s) 331, 763
BstHHI GCGC 1 cut(s) 569
BstKTI GATC 1 cut(s) 654
BstMAI GTCTC 3 cut(s) 111, 351, 581
BstMBI GATC 1 cut(s) 651
BstMCI CGRYCG 1 cut(s) 424
BstNI CCWGG 4 cut(s) 465, 645, 665, 708
BstNSI RCATGY 2 cut(s) 476, 751
BstSCI CCNGG 4 cut(s) 463, 643, 663, 706
BstSFI CTRYAG 1 cut(s) 675
BstUI CGCG 2 cut(s) 331, 763
BstV2I GAAGAC 2 cut(s) 491, 620
Bsu36I CCTNAGG 1 cut(s) 350
BsuRI GGCC 3 cut(s) 175, 449, 865
BtgZI GCGATG 1 cut(s) 213
BtrI CACGTC 1 cut(s) 796
BveI ACCTGC 2 cut(s) 84, 815
Cac8I GCNNGC 2 cut(s) 474, 565
CfoI GCGC 1 cut(s) 569
Cfr13I GGNCC 5 cut(s) 448, 461, 641, 731, 758
CseI GACGC 2 cut(s) 99, 320
Csp6I GTAC 2 cut(s) 97, 828
CviAII CATG 2 cut(s) 473, 748
CviQI GTAC 2 cut(s) 97, 828
DdeI CTNAG 6 cut(s) 350, 381, 635, 724, 789, 860
DpnI GATC 1 cut(s) 653
DpnII GATC 1 cut(s) 651
DraIII CACNNNGTG 1 cut(s) 110
EaeI YGGCCR 1 cut(s) 173
Eam1104I CTCTTC 1 cut(s) 122
EarI CTCTTC 1 cut(s) 122
EciI GGCGGA 1 cut(s) 210
Eco130I CCWWGG 2 cut(s) 73, 833
Eco24I GRGCYC 1 cut(s) 136
Eco31I GGTCTC 1 cut(s) 581
Eco47I GGWCC 4 cut(s) 461, 641, 731, 758
Eco57I CTGAAG 1 cut(s) 356
Eco81I CCTNAGG 1 cut(s) 350
EcoRII CCWGG 4 cut(s) 463, 643, 663, 706
EcoT14I CCWWGG 2 cut(s) 73, 833
EcoT22I ATGCAT 1 cut(s) 478
EcoT38I GRGCYC 1 cut(s) 136
ErhI CCWWGG 2 cut(s) 73, 833
Esp3I CGTCTC 2 cut(s) 111, 351
FaeI CATG 2 cut(s) 476, 751
FaqI GGGAC 3 cut(s) 92, 681, 717
FatI CATG 2 cut(s) 472, 747
FauI CCCGC 2 cut(s) 70, 336
FauNDI CATATG 1 cut(s) 478
Fnu4HI GCNGC 3 cut(s) 156, 173, 546
FriOI GRGCYC 1 cut(s) 136
Fsp4HI GCNGC 3 cut(s) 156, 173, 546
FspBI CTAG 2 cut(s) 317, 618
GlaI GCGC 1 cut(s) 568
GluI GCNGC 3 cut(s) 156, 173, 546
GsaI CCCAGC 2 cut(s) 198, 739
HaeIII GGCC 3 cut(s) 175, 449, 865
HgaI GACGC 2 cut(s) 99, 320
HhaI GCGC 1 cut(s) 569
Hin1I GRCGYC 1 cut(s) 312
Hin1II CATG 2 cut(s) 476, 751
Hin6I GCGC 1 cut(s) 567
HinP1I GCGC 1 cut(s) 567
HincII GTYRAC 1 cut(s) 230
HindII GTYRAC 1 cut(s) 230
HindIII AAGCTT 1 cut(s) 390
HinfI GANTC 6 cut(s) 141, 150, 226, 242, 262, 407
Hpy166II GTNNAC 3 cut(s) 47, 230, 641
Hpy188I TCNGA 2 cut(s) 375, 849
Hpy188III TCNNGA 3 cut(s) 87, 304, 716
Hpy8I GTNNAC 3 cut(s) 47, 230, 641
Hpy99I CGWCG 4 cut(s) 93, 209, 212, 606
HpyCH4III ACNGT 2 cut(s) 422, 870
HpyCH4IV ACGT 3 cut(s) 559, 601, 795
HpyCH4V TGCA 3 cut(s) 476, 818, 824
HpyF3I CTNAG 6 cut(s) 350, 381, 635, 724, 789, 860
HpySE526I ACGT 3 cut(s) 559, 601, 795
Hsp92I GRCGYC 1 cut(s) 312
Hsp92II CATG 2 cut(s) 476, 751
HspAI GCGC 1 cut(s) 567
KpnI GGTACC 1 cut(s) 831
Kzo9I GATC 1 cut(s) 651
LmnI GCTCC 2 cut(s) 574, 850
LweI GCATC 1 cut(s) 780
MaeI CTAG 2 cut(s) 317, 618
MaeII ACGT 3 cut(s) 559, 601, 795
MaeIII GTNAC 1 cut(s) 416
MalI GATC 1 cut(s) 653
MboI GATC 1 cut(s) 651
MboII GAAGA 6 cut(s) 139, 292, 362, 491, 625, 862
MfeI CAATTG 1 cut(s) 819
MhlI GDGCHC 3 cut(s) 136, 795, 847
MluCI AATT 4 cut(s) 10, 21, 573, 819
MlyI GAGTC 3 cut(s) 159, 235, 236
MnlI CCTC 6 cut(s) 332, 376, 461, 526, 599, 707
Mph1103I ATGCAT 1 cut(s) 478
MseI TTAA 2 cut(s) 30, 877
MslI CAYNNNNRTG 2 cut(s) 477, 798
MspR9I CCNGG 4 cut(s) 465, 645, 665, 708
MunI CAATTG 1 cut(s) 819
MvaI CCWGG 4 cut(s) 465, 645, 665, 708
MvnI CGCG 2 cut(s) 331, 763
NdeI CATATG 1 cut(s) 478
NdeII GATC 1 cut(s) 651
NlaIII CATG 2 cut(s) 476, 751
NlaIV GGNNCC 3 cut(s) 450, 733, 829
NmeAIII GCCGAG 2 cut(s) 249, 318
NmuCI GTSAC 1 cut(s) 416
NsiI ATGCAT 1 cut(s) 478
NspI RCATGY 2 cut(s) 476, 751
PaeI GCATGC 1 cut(s) 476
PasI CCCWGGG 1 cut(s) 664
PciI ACATGT 1 cut(s) 747
PfeI GAWTC 3 cut(s) 141, 262, 407
PflMI CCANNNNNTGG 1 cut(s) 578
PkrI GCNGC 3 cut(s) 157, 174, 547
PleI GAGTC 3 cut(s) 158, 234, 236
PpsI GAGTC 3 cut(s) 158, 234, 236
Ppu21I YACGTR 1 cut(s) 560
PscI ACATGT 1 cut(s) 747
Psp6I CCWGG 4 cut(s) 463, 643, 663, 706
PspFI CCCAGC 2 cut(s) 194, 735
PspGI CCWGG 4 cut(s) 463, 643, 663, 706
PspN4I GGNNCC 3 cut(s) 450, 733, 829
PspPI GGNCC 5 cut(s) 448, 461, 641, 731, 758
RsaI GTAC 2 cut(s) 98, 829
RsaNI GTAC 2 cut(s) 97, 828
RseI CAYNNNNRTG 2 cut(s) 477, 798
SaqAI TTAA 2 cut(s) 30, 877
SatI GCNGC 3 cut(s) 156, 173, 546
Sau3AI GATC 1 cut(s) 651
Sau96I GGNCC 5 cut(s) 448, 461, 641, 731, 758
SchI GAGTC 3 cut(s) 159, 235, 236
ScrFI CCNGG 4 cut(s) 465, 645, 665, 708
SduI GDGCHC 3 cut(s) 136, 795, 847
SetI ASST 8 cut(s) 98, 324, 387, 394, 562, 604, 798, 829
SfaNI GCATC 1 cut(s) 780
SfcI CTRYAG 1 cut(s) 675
SinI GGWCC 4 cut(s) 461, 641, 731, 758
SmiMI CAYNNNNRTG 2 cut(s) 477, 798
SpeI ACTAGT 1 cut(s) 617
SphI GCATGC 1 cut(s) 476
Sse9I AATT 4 cut(s) 10, 21, 573, 819
SsiI CCGC 8 cut(s) 63, 156, 172, 221, 269, 329, 545, 761
SspMI CTAG 2 cut(s) 317, 618
StyD4I CCNGG 4 cut(s) 463, 643, 663, 706
StyI CCWWGG 2 cut(s) 73, 833
TaaI ACNGT 2 cut(s) 422, 870
TaiI ACGT 3 cut(s) 562, 604, 798
TaqI TCGA 2 cut(s) 424, 604
TaqII GACCGA 1 cut(s) 644
TasI AATT 4 cut(s) 10, 21, 573, 819
TauI GCSGC 3 cut(s) 158, 175, 548
TfiI GAWTC 3 cut(s) 141, 262, 407
Tru1I TTAA 2 cut(s) 30, 877
Tru9I TTAA 2 cut(s) 30, 877
TseFI GTSAC 1 cut(s) 416
Tsp45I GTSAC 1 cut(s) 416
TspDTI ATGAA 2 cut(s) 140, 491
Van91I CCANNNNNTGG 1 cut(s) 578
VpaK11BI GGWCC 4 cut(s) 461, 641, 731, 758
XapI RAATTY 1 cut(s) 10
XceI RCATGY 2 cut(s) 476, 751
XspI CTAG 2 cut(s) 317, 618
Zsp2I ATGCAT 1 cut(s) 478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.