Rorug04G0326000

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000056
Physical Location & Seq
Reverse (-)
50094117 .. 50098723
4607 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0326000.1

Sequence Viewer

Length: 1878 bp
ATGGTTGTGGCGCAAAAACTGAAGGAGGCGGAGATTACCGAGCAGGAATCGCTTCTTCTGACGAGGAACCTGCTTCGCATCGCTATATTCAATATCAGTTACATCCGAGGCCTTTTTCCGGAGAAGTATTTCAACGATAAATCTGTTCCTGCTTTAGAGATGAAGATCAAAAAGCTAATGCCAGTGGATGCAGAGTCTCGCAGACTTATTGATTGGATGGAGAAAGGTGTATACGACGCCTTGCAGAAGAAGTACCTGAAAACGCTTTTGTTCTGTGTGTGTGAAGACGTTGAAGGGCCGATGATAGAGGAATACACTTTTTCTTTCAGCTATTCAAAATCTGAAAACCAGGAAGTTTCAATGAATATCAATCGATCCGGGAATAAGAAACAGGGTGGAACATTCAAGTATAACTCCACAACAGAAATTACACCCAACCAGATGAGGAGTTCTGCTTGTAAAATGGTCCGCACACTGGTTCAGCTGATGAGAACTTTGGATAGAATGCCAGAAGAGCGCACCATTCTGATGAAACTCCTATACTATGATGATGTCACGCCAGCAGATTATGAGCCTCCATTCTTCAGAGGCTGCACAGAAGAAGAAACTCGAAACTCATGGACCAAGAATCCTTTGAAAATGGAAGTTGGGAATGTAAACAGCAAGCATCTTGTCTTAGCTCTCAAGGTAAAGAGCGTGCTTGATCCCTGTGAGGATGAAAATGATGATATTCAAGATGATGAAGTGAGCTTAGGAGATGACTCCATGCAAATGGATGGCTCTTCTGAATCTGACAGTGAGGTGAATCAATCTCAAGACGACCAATATATAGTTGTTCCTGCAGCTAAGCATCAACCACAGGAAGATAACAGCATACTTAAGGAAGATAATTGCATGGATGGTGAAGCTACAGATGATACTCAGGATCCAGAGGAAGATGAACAGCAATTTTCCCGGATAAAGAACTGGATCAGTAGTTGCCATCTTGACACTGTTGAAGTTACTGATGTTCTCTCGAATTTCCCAGACATTTCAGTGGTTCTAACTGAAGAAATTATGGACAAGCTTGTTGTGGAAGGCATTCTATCAAAAGCTGGAGGGGACACTTACACTATTAACAGGCAGAAGAAGTCTGATTATGAGTTCACTGTGTTGAAACAAGAAATTAATAGTCAAGCAGTCCTGGTTGGTGACAAAACTCCAATGTCTAATGATCACATGTACATGAAGGCGCTGTGTCATGCTCTTCCTATGCAGTATGTGTCAGTCGCAAAGCTTCAGAACAAGCTTGGAGGAAAAGCAAATCAGAGTACAGTGCGGAAGATGATTGATAAGATGGCACAAGAAGGTTTTGTTGAAGCCAAAGGCAACCGAAGGCTAGGAAAGCGTGTGATCCATTCTGATGTTACTGAGAAGAAACTTATTGAAGTCCATAAAGCTTTGAATTTTGATGCAATGGATGTTGACAACGTTGAACCACCAAGCAAGTCAAATCATCAAGACATTCATCCAATGGGAAGCAACTACAGAGACATATCCACATGTGGTGTGCTCCGCTCGATTGGATCAGATCTCACACGCATGAGAATAAGGCCTAATTCACAGGAATATAGTCCAAACAGGAGTGAGCAGACTACTTCAAAGACAAAGGAGCAGGGAAACACTCCCACAAGCAGGGCGCAGCCAGTAATTTCAAGAGAGAGCTTTGCACCTGGCAATGATGATATTAGAGCCAATGGCAACACAAATCACTGTGACGATGGGGAGAGAGTGGTCTGTAGTAGTATGTCCACCCAAGGCAAACGTTCCAGGAAAACAAGCATGGTCAAGGAGCCTATTCTACAGTACACAAAGCGCCAGAAATCTCAAGCCCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

625

Amino Acids

70.95

Weight (kDa)

5.35

Isoelectric Point (pI)

54.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HORMA PF02301 17 - 223 3.3e-65 HORMA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 78
AccBSI CCGCTC 1 cut(s) 1557
AccI GTMKAC 1 cut(s) 231
AccIII TCCGGA 1 cut(s) 118
AciI CCGC 4 cut(s) 29, 469, 1318, 1555
AclI AACGTT 2 cut(s) 1470, 1804
AclWI GGATC 7 cut(s) 369, 698, 920, 933, 977, 1387, 1573
AcsI RAATTY 2 cut(s) 1018, 1444
AcuI CTGAAG 4 cut(s) 41, 568, 1068, 1262
AcyI GRCGYC 1 cut(s) 237
AfaI GTAC 4 cut(s) 254, 1223, 1312, 1847
AfiI CCNNNNNNNGG 3 cut(s) 118, 475, 1674
AflII CTTAAG 1 cut(s) 878
AflIII ACRYGT 2 cut(s) 1218, 1541
AjnI CCWGG 4 cut(s) 348, 1182, 1711, 1808
Alw21I GWGCWC 1 cut(s) 1554
Alw26I GTCTC 2 cut(s) 201, 1524
AlwI GGATC 7 cut(s) 369, 698, 920, 933, 977, 1387, 1573
AlwNI CAGNNNCTG 1 cut(s) 591
Aor13HI TCCGGA 1 cut(s) 118
AoxI GGCC 3 cut(s) 109, 296, 1592
ApeKI GCWGC 3 cut(s) 591, 842, 1681
ApoI RAATTY 2 cut(s) 1018, 1444
AseI ATTAAT 1 cut(s) 1167
Asp700I GAANNNNTTC 3 cut(s) 51, 128, 1080
AspLEI GCGC 5 cut(s) 13, 519, 1234, 1681, 1857
AspS9I GGNCC 3 cut(s) 296, 466, 621
AsuC2I CCSGG 2 cut(s) 379, 955
AsuHPI GGTGA 3 cut(s) 814, 914, 1202
AvaII GGWCC 2 cut(s) 466, 621
BamHI GGATCC 1 cut(s) 925
BbsI GAAGAC 1 cut(s) 291
Bbv12I GWGCWC 1 cut(s) 1554
BbvI GCAGC 3 cut(s) 578, 854, 1693
BccI CCATC 6 cut(s) 211, 770, 893, 990, 1330, 1754
BcgI CGANNNNNNTGC 2 cut(s) 52, 86
BciT130I CCWGG 4 cut(s) 350, 1184, 1713, 1810
BclI TGATCA 1 cut(s) 1213
BcnI CCSGG 2 cut(s) 379, 955
BcoDI GTCTC 2 cut(s) 201, 1524
BfaI CTAG 1 cut(s) 1379
BfmI CTRYAG 5 cut(s) 840, 909, 1525, 1777, 1841
BfoI RGCGCY 2 cut(s) 1235, 1858
BfrI CTTAAG 1 cut(s) 878
BfuAI ACCTGC 1 cut(s) 78
BglII AGATCT 1 cut(s) 1570
BisI GCNGC 3 cut(s) 592, 843, 1682
BlpI GCTNAGC 1 cut(s) 846
BlsI GCNGC 3 cut(s) 593, 844, 1683
Bme1390I CCNGG 6 cut(s) 350, 379, 955, 1184, 1713, 1810
Bme18I GGWCC 2 cut(s) 466, 621
BmgT120I GGNCC 3 cut(s) 296, 466, 621
BmiI GGNNCC 3 cut(s) 68, 927, 1833
BmrFI CCNGG 6 cut(s) 350, 379, 955, 1184, 1713, 1810
BmsI GCATC 5 cut(s) 87, 178, 676, 859, 1441
BpiI GAAGAC 1 cut(s) 291
BpmI CTGGAG 1 cut(s) 1116
Bpu10I CCTNAGC 1 cut(s) 751
Bpu1102I GCTNAGC 1 cut(s) 846
BpuEI CTTGAG 3 cut(s) 668, 798, 1851
BpuMI CCSGG 2 cut(s) 379, 955
Bsa29I ATCGAT 1 cut(s) 373
BsaBI GATNNNNATC 1 cut(s) 164
BsaHI GRCGYC 1 cut(s) 237
BsaJI CCNNGG 2 cut(s) 106, 1795
BsaWI WCCGGW 1 cut(s) 118
Bsc4I CCNNNNNNNGG 3 cut(s) 118, 475, 1674
Bse1I ACTGG 4 cut(s) 182, 480, 971, 1685
Bse3DI GCAATG 2 cut(s) 1461, 1723
Bse8I GATNNNNATC 1 cut(s) 164
BseAI TCCGGA 1 cut(s) 118
BseBI CCWGG 4 cut(s) 350, 1184, 1713, 1810
BseCI ATCGAT 1 cut(s) 373
BseDI CCNNGG 2 cut(s) 106, 1795
BseGI GGATG 8 cut(s) 102, 193, 222, 721, 781, 904, 1465, 1507
BseJI GATNNNNATC 1 cut(s) 164
BseLI CCNNNNNNNGG 3 cut(s) 118, 475, 1674
BseMI GCAATG 2 cut(s) 1461, 1723
BseMII CTCAG 2 cut(s) 935, 1401
BseNI ACTGG 4 cut(s) 182, 480, 971, 1685
BseRI GAGGAG 1 cut(s) 460
BseXI GCAGC 3 cut(s) 578, 854, 1693
BsgI GTGCAG 1 cut(s) 577
BshFI GGCC 3 cut(s) 111, 298, 1594
BshVI ATCGAT 1 cut(s) 373
BsiHKAI GWGCWC 1 cut(s) 1554
BsiSI CCGG 3 cut(s) 119, 378, 955
BslFI GGGAC 1 cut(s) 1115
BslI CCNNNNNNNGG 3 cut(s) 118, 475, 1674
BsmAI GTCTC 2 cut(s) 201, 1524
BsmFI GGGAC 1 cut(s) 1115
BsmI GAATGC 2 cut(s) 510, 1080
BsnI GGCC 3 cut(s) 111, 298, 1594
Bsp1286I GDGCHC 1 cut(s) 1554
Bsp13I TCCGGA 1 cut(s) 118
Bsp1407I TGTACA 1 cut(s) 1221
Bsp143I GATC 9 cut(s) 165, 374, 703, 925, 969, 1213, 1392, 1565, 1570
Bsp1720I GCTNAGC 1 cut(s) 846
BspACI CCGC 4 cut(s) 29, 469, 1318, 1555
BspANI GGCC 3 cut(s) 111, 298, 1594
BspCNI CTCAG 2 cut(s) 934, 1402
BspDI ATCGAT 1 cut(s) 373
BspEI TCCGGA 1 cut(s) 118
BspLI GGNNCC 3 cut(s) 68, 927, 1833
BspMAI CTGCAG 1 cut(s) 844
BspMI ACCTGC 1 cut(s) 78
BspPI GGATC 7 cut(s) 369, 698, 920, 933, 977, 1387, 1573
BspQI GCTCTTC 3 cut(s) 507, 787, 1251
BspTI CTTAAG 1 cut(s) 878
BsrBI CCGCTC 1 cut(s) 1557
BsrDI GCAATG 2 cut(s) 1461, 1723
BsrGI TGTACA 1 cut(s) 1221
BsrI ACTGG 4 cut(s) 182, 480, 971, 1685
BssECI CCNNGG 2 cut(s) 106, 1795
BssMI GATC 9 cut(s) 165, 374, 703, 925, 969, 1213, 1392, 1565, 1570
BssNAI GTATAC 1 cut(s) 232
BssNI GRCGYC 1 cut(s) 237
BssT1I CCWWGG 1 cut(s) 1795
Bst1107I GTATAC 1 cut(s) 232
Bst2UI CCWGG 4 cut(s) 350, 1184, 1713, 1810
Bst4CI ACNGT 6 cut(s) 797, 994, 1150, 1315, 1754, 1845
Bst6I CTCTTC 3 cut(s) 507, 787, 1251
BstACI GRCGYC 1 cut(s) 237
BstAFI CTTAAG 1 cut(s) 878
BstAUI TGTACA 1 cut(s) 1221
BstC8I GCNNGC 3 cut(s) 561, 665, 698
BstDEI CTNAG 5 cut(s) 676, 751, 846, 921, 1410
BstF5I GGATG 8 cut(s) 102, 193, 222, 721, 781, 904, 1465, 1507
BstH2I RGCGCY 2 cut(s) 1235, 1858
BstHHI GCGC 5 cut(s) 13, 519, 1234, 1681, 1857
BstKTI GATC 9 cut(s) 168, 377, 706, 928, 972, 1216, 1395, 1568, 1573
BstMAI GTCTC 2 cut(s) 201, 1524
BstMBI GATC 9 cut(s) 165, 374, 703, 925, 969, 1213, 1392, 1565, 1570
BstMWI GCNNNNNNNGC 3 cut(s) 49, 514, 1384
BstNI CCWGG 4 cut(s) 350, 1184, 1713, 1810
BstNSI RCATGY 2 cut(s) 1222, 1545
BstSCI CCNGG 6 cut(s) 348, 377, 953, 1182, 1711, 1808
BstSFI CTRYAG 5 cut(s) 840, 909, 1525, 1777, 1841
BstV1I GCAGC 3 cut(s) 578, 854, 1693
BstV2I GAAGAC 1 cut(s) 291
BstX2I RGATCY 2 cut(s) 925, 1570
BstXI CCANNNNNNTGG 1 cut(s) 772
BstYI RGATCY 2 cut(s) 925, 1570
BstZ17I GTATAC 1 cut(s) 232
Bsu15I ATCGAT 1 cut(s) 373
BsuRI GGCC 3 cut(s) 111, 298, 1594
BsuTUI ATCGAT 1 cut(s) 373
BtgZI GCGATG 1 cut(s) 64
BtsCI GGATG 8 cut(s) 102, 193, 222, 721, 781, 904, 1465, 1507
BtsIMutI CAGTG 8 cut(s) 189, 473, 802, 990, 1041, 1146, 1320, 1750
BveI ACCTGC 1 cut(s) 78
Cac8I GCNNGC 3 cut(s) 561, 665, 698
CaiI CAGNNNCTG 1 cut(s) 591
CfoI GCGC 5 cut(s) 13, 519, 1234, 1681, 1857
Cfr13I GGNCC 3 cut(s) 296, 466, 621
ClaI ATCGAT 1 cut(s) 373
CseI GACGC 1 cut(s) 245
Csp6I GTAC 4 cut(s) 253, 1222, 1311, 1846
CviAII CATG 9 cut(s) 618, 766, 895, 1219, 1225, 1241, 1542, 1582, 1822
CviQI GTAC 4 cut(s) 253, 1222, 1311, 1846
DdeI CTNAG 5 cut(s) 676, 751, 846, 921, 1410
DpnI GATC 9 cut(s) 167, 376, 705, 927, 971, 1215, 1394, 1567, 1572
DpnII GATC 9 cut(s) 165, 374, 703, 925, 969, 1213, 1392, 1565, 1570
Eam1104I CTCTTC 3 cut(s) 507, 787, 1251
EarI CTCTTC 3 cut(s) 507, 787, 1251
EciI GGCGGA 1 cut(s) 44
Eco130I CCWWGG 1 cut(s) 1795
Eco147I AGGCCT 2 cut(s) 111, 1594
Eco47I GGWCC 2 cut(s) 466, 621
Eco57I CTGAAG 4 cut(s) 41, 568, 1068, 1262
EcoRII CCWGG 4 cut(s) 348, 1182, 1711, 1808
EcoT14I CCWWGG 1 cut(s) 1795
ErhI CCWWGG 1 cut(s) 1795
FaeI CATG 9 cut(s) 621, 769, 898, 1222, 1228, 1244, 1545, 1585, 1825
FaqI GGGAC 1 cut(s) 1115
FatI CATG 9 cut(s) 617, 765, 894, 1218, 1224, 1240, 1541, 1581, 1821
FbaI TGATCA 1 cut(s) 1213
FblI GTMKAC 1 cut(s) 231
Fnu4HI GCNGC 3 cut(s) 592, 843, 1682
FokI GGATG 8 cut(s) 89, 200, 229, 728, 788, 911, 1472, 1494
Fsp4HI GCNGC 3 cut(s) 592, 843, 1682
FspBI CTAG 1 cut(s) 1379
GlaI GCGC 5 cut(s) 12, 518, 1233, 1680, 1856
GluI GCNGC 3 cut(s) 592, 843, 1682
GsuI CTGGAG 1 cut(s) 1116
HaeII RGCGCY 2 cut(s) 1235, 1858
HaeIII GGCC 3 cut(s) 111, 298, 1594
HapII CCGG 3 cut(s) 119, 378, 955
HgaI GACGC 1 cut(s) 245
HhaI GCGC 5 cut(s) 13, 519, 1234, 1681, 1857
Hin1I GRCGYC 1 cut(s) 237
Hin1II CATG 9 cut(s) 621, 769, 898, 1222, 1228, 1244, 1545, 1585, 1825
Hin6I GCGC 5 cut(s) 11, 517, 1232, 1679, 1855
HinP1I GCGC 5 cut(s) 11, 517, 1232, 1679, 1855
HincII GTYRAC 1 cut(s) 1465
HindII GTYRAC 1 cut(s) 1465
HindIII AAGCTT 4 cut(s) 1064, 1274, 1286, 1437
HinfI GANTC 6 cut(s) 47, 194, 628, 761, 788, 805
HpaII CCGG 3 cut(s) 119, 378, 955
HphI GGTGA 3 cut(s) 814, 914, 1202
Hpy166II GTNNAC 6 cut(s) 232, 658, 1146, 1465, 1791, 1848
Hpy188III TCNNGA 9 cut(s) 119, 734, 815, 923, 929, 986, 1015, 1499, 1695
Hpy8I GTNNAC 6 cut(s) 232, 658, 1146, 1465, 1791, 1848
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 6 cut(s) 16, 287, 1070, 1222, 1340, 1368
HpyCH4III ACNGT 6 cut(s) 797, 994, 1150, 1315, 1754, 1845
HpyCH4IV ACGT 3 cut(s) 288, 1470, 1804
HpyCH4V TGCA 9 cut(s) 191, 244, 594, 769, 842, 894, 1255, 1454, 1709
HpyF10VI GCNNNNNNNGC 3 cut(s) 49, 514, 1384
HpyF3I CTNAG 5 cut(s) 676, 751, 846, 921, 1410
HpySE526I ACGT 3 cut(s) 288, 1470, 1804
Hsp92I GRCGYC 1 cut(s) 237
Hsp92II CATG 9 cut(s) 621, 769, 898, 1222, 1228, 1244, 1545, 1585, 1825
HspAI GCGC 5 cut(s) 11, 517, 1232, 1679, 1855
Kpn2I TCCGGA 1 cut(s) 118
Ksp22I TGATCA 1 cut(s) 1213
Kzo9I GATC 9 cut(s) 165, 374, 703, 925, 969, 1213, 1392, 1565, 1570
LguI GCTCTTC 3 cut(s) 507, 787, 1251
LmnI GCTCC 3 cut(s) 1557, 1651, 1831
Lsp1109I GCAGC 3 cut(s) 578, 854, 1693
LweI GCATC 5 cut(s) 87, 178, 676, 859, 1441
MaeI CTAG 1 cut(s) 1379
MaeII ACGT 3 cut(s) 288, 1470, 1804
MaeIII GTNAC 6 cut(s) 98, 553, 1000, 1190, 1405, 1754
MalI GATC 9 cut(s) 167, 376, 705, 927, 971, 1215, 1394, 1567, 1572
MbiI CCGCTC 1 cut(s) 1557
MboI GATC 9 cut(s) 165, 374, 703, 925, 969, 1213, 1392, 1565, 1570
MflI RGATCY 2 cut(s) 925, 1570
MhlI GDGCHC 1 cut(s) 1554
MluCI AATT 9 cut(s) 426, 889, 947, 1018, 1053, 1164, 1444, 1597, 1689
MlyI GAGTC 2 cut(s) 203, 755
MroI TCCGGA 1 cut(s) 118
MroXI GAANNNNTTC 3 cut(s) 51, 128, 1080
MseI TTAA 3 cut(s) 879, 1116, 1167
MslI CAYNNNNRTG 6 cut(s) 527, 770, 1034, 1223, 1401, 1580
MspA1I CMGCKG 1 cut(s) 484
MspCI CTTAAG 1 cut(s) 878
MspI CCGG 3 cut(s) 119, 378, 955
MspR9I CCNGG 6 cut(s) 350, 379, 955, 1184, 1713, 1810
Mva1269I GAATGC 2 cut(s) 510, 1080
MvaI CCWGG 4 cut(s) 350, 1184, 1713, 1810
MwoI GCNNNNNNNGC 3 cut(s) 49, 514, 1384
NciI CCSGG 2 cut(s) 379, 955
NdeII GATC 9 cut(s) 165, 374, 703, 925, 969, 1213, 1392, 1565, 1570
NlaIII CATG 9 cut(s) 621, 769, 898, 1222, 1228, 1244, 1545, 1585, 1825
NlaIV GGNNCC 3 cut(s) 68, 927, 1833
NmuCI GTSAC 3 cut(s) 553, 1190, 1754
NspI RCATGY 2 cut(s) 1222, 1545
PceI AGGCCT 2 cut(s) 111, 1594
PciI ACATGT 2 cut(s) 1218, 1541
PciSI GCTCTTC 3 cut(s) 507, 787, 1251
PctI GAATGC 2 cut(s) 510, 1080
PdmI GAANNNNTTC 3 cut(s) 51, 128, 1080
PfeI GAWTC 4 cut(s) 47, 628, 788, 805
PfoI TCCNGGA 3 cut(s) 377, 953, 1808
PkrI GCNGC 3 cut(s) 593, 844, 1683
PleI GAGTC 2 cut(s) 202, 755
PpsI GAGTC 2 cut(s) 202, 755
PscI ACATGT 2 cut(s) 1218, 1541
PshBI ATTAAT 1 cut(s) 1167
Psp1406I AACGTT 2 cut(s) 1470, 1804
Psp6I CCWGG 4 cut(s) 348, 1182, 1711, 1808
PspGI CCWGG 4 cut(s) 348, 1182, 1711, 1808
PspN4I GGNNCC 3 cut(s) 68, 927, 1833
PspPI GGNCC 3 cut(s) 296, 466, 621
PstI CTGCAG 1 cut(s) 844
PstNI CAGNNNCTG 1 cut(s) 591
PsuI RGATCY 2 cut(s) 925, 1570
PvuII CAGCTG 1 cut(s) 484
RsaI GTAC 4 cut(s) 254, 1223, 1312, 1847
RsaNI GTAC 4 cut(s) 253, 1222, 1311, 1846
RseI CAYNNNNRTG 6 cut(s) 527, 770, 1034, 1223, 1401, 1580
SapI GCTCTTC 3 cut(s) 507, 787, 1251
SaqAI TTAA 3 cut(s) 879, 1116, 1167
SatI GCNGC 3 cut(s) 592, 843, 1682
Sau3AI GATC 9 cut(s) 165, 374, 703, 925, 969, 1213, 1392, 1565, 1570
Sau96I GGNCC 3 cut(s) 296, 466, 621
SchI GAGTC 2 cut(s) 203, 755
ScrFI CCNGG 6 cut(s) 350, 379, 955, 1184, 1713, 1810
SduI GDGCHC 1 cut(s) 1554
SfaNI GCATC 5 cut(s) 87, 178, 676, 859, 1441
SfcI CTRYAG 5 cut(s) 840, 909, 1525, 1777, 1841
SinI GGWCC 2 cut(s) 466, 621
SmiMI CAYNNNNRTG 6 cut(s) 527, 770, 1034, 1223, 1401, 1580
SmlI CTYRAG 4 cut(s) 683, 813, 878, 1866
SmoI CTYRAG 4 cut(s) 683, 813, 878, 1866
Sse9I AATT 9 cut(s) 426, 889, 947, 1018, 1053, 1164, 1444, 1597, 1689
SseBI AGGCCT 2 cut(s) 111, 1594
SsiI CCGC 4 cut(s) 29, 469, 1318, 1555
SspMI CTAG 1 cut(s) 1379
StuI AGGCCT 2 cut(s) 111, 1594
StyD4I CCNGG 6 cut(s) 348, 377, 953, 1182, 1711, 1808
StyI CCWWGG 1 cut(s) 1795
TaaI ACNGT 6 cut(s) 797, 994, 1150, 1315, 1754, 1845
TaiI ACGT 3 cut(s) 291, 1473, 1807
TaqI TCGA 4 cut(s) 373, 610, 1016, 1559
TasI AATT 9 cut(s) 426, 889, 947, 1018, 1053, 1164, 1444, 1597, 1689
TatI WGTACW 3 cut(s) 1221, 1310, 1845
TfiI GAWTC 4 cut(s) 47, 628, 788, 805
Tru1I TTAA 3 cut(s) 879, 1116, 1167
Tru9I TTAA 3 cut(s) 879, 1116, 1167
TscAI CASTG 8 cut(s) 189, 480, 802, 997, 1041, 1153, 1320, 1757
TseFI GTSAC 3 cut(s) 553, 1190, 1754
TseI GCWGC 3 cut(s) 591, 842, 1681
Tsp45I GTSAC 3 cut(s) 553, 1190, 1754
TspDTI ATGAA 8 cut(s) 176, 377, 545, 732, 756, 954, 1241, 1496
TspRI CASTG 8 cut(s) 189, 480, 802, 997, 1041, 1153, 1320, 1757
Vha464I CTTAAG 1 cut(s) 878
VpaK11BI GGWCC 2 cut(s) 466, 621
VspI ATTAAT 1 cut(s) 1167
XapI RAATTY 2 cut(s) 1018, 1444
XceI RCATGY 2 cut(s) 1222, 1545
XmiI GTMKAC 1 cut(s) 231
XmnI GAANNNNTTC 3 cut(s) 51, 128, 1080
XspI CTAG 1 cut(s) 1379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.