Rmu_sc0016754.1_g000004

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016754.1
OG0000056
Physical Location & Seq
Forward (+)
8186 .. 9148
963 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016754.1_g000004.1.cds

Sequence Viewer

Length: 963 bp
atggctacggagagacattattttcggagcacagtggagcaaactggacatagattagcctttgcccgtgcagtgtcaagcaacaggacaacgatgatcctattcactcactacaagttaaccaaaaactgctggtttgaggctccaacacggattgttaatggtccgaaaaagatcctagctaaaggagtaagttttgtccgtctctgtgacatgctttccgaaaggcgtaggtatacagcggtcatggctgagaaacttaccagcatacatgtcccagaagatgagcaagcagctattattgaaaaattatttcagctggttgaagtggcctatccagggattgctataattgtgcatgtatggaatgtgactgtctacttcttggacagtgcaagtagtcttggcccaggggatctggctcgatccttatgggccacgacaccgtttgatgagcatgatcaaatgacagttgataggtatgcaatggaatccatggaaacatatgaggcgcgtacaaagattattcctgcaaccaactcatgcattgacggtttggagagagtgaggtttgatagtttggaaactaatattagacacatgccatgtgctatttgtaaagagcgccttgattactttgctgtagaagaagggacagatcagcagctgatgattactcgcttgccctgctcgcatctttatcatggagattgtattgcccagtggcttgagtcgaatcacttatgtcccttgtgccgatacccactgccaactgtggaggaagcgggtgaatcctcacagccactgcattggaatatgctagtcatgtccgctggtggtatactaactactgctgcgtgctttgctctgcagatgattgaagcgaaattcaagacaaaaatatcggatcatctcctatattttgtgccgttggtggccatgtattcttctaagtttctgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

320

Amino Acids

36.45

Weight (kDa)

6.31

Isoelectric Point (pI)

48.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 236, 378, 841
AccII CGCG 1 cut(s) 514
AciI CCGC 3 cut(s) 242, 785, 831
AclWI GGATC 5 cut(s) 91, 169, 420, 423, 915
AcoI YGGCCR 1 cut(s) 936
AcsI RAATTY 1 cut(s) 887
AfaI GTAC 1 cut(s) 517
AfiI CCNNNNNNNGG 1 cut(s) 339
AflIII ACRYGT 1 cut(s) 271
AgsI TTSAA 4 cut(s) 305, 326, 881, 892
AjnI CCWGG 2 cut(s) 337, 409
AluBI AGCT 4 cut(s) 182, 296, 319, 667
AluI AGCT 4 cut(s) 182, 296, 319, 667
Alw21I GWGCWC 1 cut(s) 32
Alw26I GTCTC 2 cut(s) 7, 209
AlwI GGATC 5 cut(s) 91, 169, 420, 423, 915
AlwNI CAGNNNCTG 2 cut(s) 667, 805
AoxI GGCC 4 cut(s) 330, 406, 435, 936
ApeKI GCWGC 3 cut(s) 293, 664, 854
ApoI RAATTY 1 cut(s) 887
ArsI GACNNNNNNTTYG 1 cut(s) 38
AspLEI GCGC 2 cut(s) 514, 627
AspS9I GGNCC 3 cut(s) 164, 407, 435
AsuHPI GGTGA 1 cut(s) 800
AvaII GGWCC 1 cut(s) 164
BalI TGGCCA 1 cut(s) 938
Bbv12I GWGCWC 1 cut(s) 32
BbvI GCAGC 3 cut(s) 305, 676, 841
BceAI ACGGC 1 cut(s) 913
BciT130I CCWGG 2 cut(s) 339, 411
BclI TGATCA 1 cut(s) 460
BcoDI GTCTC 2 cut(s) 7, 209
BfaI CTAG 2 cut(s) 179, 821
BfmI CTRYAG 2 cut(s) 642, 869
BfoI RGCGCY 1 cut(s) 628
BisI GCNGC 3 cut(s) 294, 665, 855
BlsI GCNGC 3 cut(s) 295, 666, 856
Bme1390I CCNGG 2 cut(s) 339, 411
Bme18I GGWCC 1 cut(s) 164
BmgT120I GGNCC 3 cut(s) 164, 407, 435
BmiI GGNNCC 1 cut(s) 144
BmrFI CCNGG 2 cut(s) 339, 411
BmrI ACTGGG 1 cut(s) 715
BmsI GCATC 1 cut(s) 703
BmuI ACTGGG 1 cut(s) 715
BpuEI CTTGAG 1 cut(s) 749
BsaJI CCNNGG 4 cut(s) 338, 409, 410, 495
Bsc4I CCNNNNNNNGG 1 cut(s) 339
Bse1I ACTGG 2 cut(s) 49, 721
Bse3DI GCAATG 1 cut(s) 492
BseBI CCWGG 2 cut(s) 339, 411
BseDI CCNNGG 4 cut(s) 338, 409, 410, 495
BseLI CCNNNNNNNGG 1 cut(s) 339
BseMI GCAATG 1 cut(s) 492
BseMII CTCAG 1 cut(s) 243
BseNI ACTGG 2 cut(s) 49, 721
BseXI GCAGC 3 cut(s) 305, 676, 841
BsgI GTGCAG 1 cut(s) 90
Bsh1236I CGCG 1 cut(s) 514
BshFI GGCC 4 cut(s) 332, 408, 437, 938
BsiHKAI GWGCWC 1 cut(s) 32
BslFI GGGAC 3 cut(s) 260, 667, 732
BslI CCNNNNNNNGG 1 cut(s) 339
BsmAI GTCTC 2 cut(s) 7, 209
BsmBI CGTCTC 1 cut(s) 209
BsmFI GGGAC 3 cut(s) 260, 667, 732
BsnI GGCC 4 cut(s) 332, 408, 437, 938
Bsp1286I GDGCHC 1 cut(s) 32
Bsp143I GATC 7 cut(s) 96, 174, 415, 425, 460, 658, 907
Bsp19I CCATGG 1 cut(s) 495
BspACI CCGC 3 cut(s) 242, 785, 831
BspANI GGCC 4 cut(s) 332, 408, 437, 938
BspCNI CTCAG 1 cut(s) 244
BspFNI CGCG 1 cut(s) 514
BspLI GGNNCC 1 cut(s) 144
BspMAI CTGCAG 1 cut(s) 873
BspPI GGATC 5 cut(s) 91, 169, 420, 423, 915
BsrDI GCAATG 1 cut(s) 492
BsrI ACTGG 2 cut(s) 49, 721
BssECI CCNNGG 4 cut(s) 338, 409, 410, 495
BssMI GATC 7 cut(s) 96, 174, 415, 425, 460, 658, 907
BssNAI GTATAC 2 cut(s) 237, 842
BssT1I CCWWGG 1 cut(s) 495
Bst1107I GTATAC 2 cut(s) 237, 842
Bst2UI CCWGG 2 cut(s) 339, 411
Bst4CI ACNGT 7 cut(s) 34, 376, 392, 447, 472, 554, 775
BstC8I GCNNGC 4 cut(s) 291, 683, 692, 859
BstDEI CTNAG 2 cut(s) 252, 951
BstDSI CCRYGG 1 cut(s) 495
BstFNI CGCG 1 cut(s) 514
BstH2I RGCGCY 1 cut(s) 628
BstHHI GCGC 2 cut(s) 514, 627
BstKTI GATC 7 cut(s) 99, 177, 418, 428, 463, 661, 910
BstMAI GTCTC 2 cut(s) 7, 209
BstMBI GATC 7 cut(s) 96, 174, 415, 425, 460, 658, 907
BstMWI GCNNNNNNNGC 4 cut(s) 248, 687, 691, 863
BstNI CCWGG 2 cut(s) 339, 411
BstNSI RCATGY 4 cut(s) 217, 275, 362, 604
BstSCI CCNGG 2 cut(s) 337, 409
BstSFI CTRYAG 2 cut(s) 642, 869
BstUI CGCG 1 cut(s) 514
BstV1I GCAGC 3 cut(s) 305, 676, 841
BstX2I RGATCY 2 cut(s) 174, 415
BstXI CCANNNNNNTGG 1 cut(s) 810
BstYI RGATCY 2 cut(s) 174, 415
BstZ17I GTATAC 2 cut(s) 237, 842
BsuRI GGCC 4 cut(s) 332, 408, 437, 938
BtgI CCRYGG 1 cut(s) 495
BtsI GCAGTG 3 cut(s) 78, 764, 803
BtsIMutI CAGTG 6 cut(s) 39, 78, 397, 728, 764, 803
Cac8I GCNNGC 4 cut(s) 291, 683, 692, 859
CaiI CAGNNNCTG 2 cut(s) 667, 805
CfoI GCGC 2 cut(s) 514, 627
Cfr13I GGNCC 3 cut(s) 164, 407, 435
Csp6I GTAC 1 cut(s) 516
CviQI GTAC 1 cut(s) 516
DdeI CTNAG 2 cut(s) 252, 951
DpnI GATC 7 cut(s) 98, 176, 417, 427, 462, 660, 909
DpnII GATC 7 cut(s) 96, 174, 415, 425, 460, 658, 907
EaeI YGGCCR 1 cut(s) 936
Eco130I CCWWGG 1 cut(s) 495
Eco47I GGWCC 1 cut(s) 164
EcoRII CCWGG 2 cut(s) 337, 409
EcoT14I CCWWGG 1 cut(s) 495
EcoT22I ATGCAT 1 cut(s) 548
ErhI CCWWGG 1 cut(s) 495
Esp3I CGTCTC 1 cut(s) 209
FalI AAGNNNNNCTT 2 cut(s) 612, 644
FaqI GGGAC 3 cut(s) 260, 667, 732
FauI CCCGC 1 cut(s) 778
FauNDI CATATG 1 cut(s) 505
FbaI TGATCA 1 cut(s) 460
FblI GTMKAC 3 cut(s) 236, 378, 841
Fnu4HI GCNGC 3 cut(s) 294, 665, 855
Fsp4HI GCNGC 3 cut(s) 294, 665, 855
FspBI CTAG 2 cut(s) 179, 821
GlaI GCGC 2 cut(s) 513, 626
GluI GCNGC 3 cut(s) 294, 665, 855
HaeII RGCGCY 1 cut(s) 628
HaeIII GGCC 4 cut(s) 332, 408, 437, 938
HhaI GCGC 2 cut(s) 514, 627
Hin6I GCGC 2 cut(s) 512, 625
HinP1I GCGC 2 cut(s) 512, 625
HincII GTYRAC 1 cut(s) 120
HindII GTYRAC 1 cut(s) 120
HinfI GANTC 4 cut(s) 491, 731, 736, 791
HpaI GTTAAC 1 cut(s) 120
HphI GGTGA 1 cut(s) 800
Hpy166II GTNNAC 4 cut(s) 120, 237, 379, 842
Hpy188I TCNGA 4 cut(s) 27, 168, 223, 907
Hpy188III TCNNGA 1 cut(s) 892
Hpy8I GTNNAC 4 cut(s) 120, 237, 379, 842
HpyAV CCTTC 1 cut(s) 644
HpyCH4III ACNGT 7 cut(s) 34, 376, 392, 447, 472, 554, 775
HpyCH4V TGCA 8 cut(s) 71, 358, 395, 485, 533, 546, 808, 871
HpyF10VI GCNNNNNNNGC 4 cut(s) 248, 687, 691, 863
HpyF3I CTNAG 2 cut(s) 252, 951
HspAI GCGC 2 cut(s) 512, 625
Ksp22I TGATCA 1 cut(s) 460
KspAI GTTAAC 1 cut(s) 120
Kzo9I GATC 7 cut(s) 96, 174, 415, 425, 460, 658, 907
LmnI GCTCC 3 cut(s) 27, 37, 148
Lsp1109I GCAGC 3 cut(s) 305, 676, 841
LweI GCATC 1 cut(s) 703
MaeI CTAG 2 cut(s) 179, 821
MaeIII GTNAC 2 cut(s) 209, 370
MalI GATC 7 cut(s) 98, 176, 417, 427, 462, 660, 909
MboI GATC 7 cut(s) 96, 174, 415, 425, 460, 658, 907
MboII GAAGA 3 cut(s) 293, 659, 939
MflI RGATCY 2 cut(s) 174, 415
MhlI GDGCHC 1 cut(s) 32
MlsI TGGCCA 1 cut(s) 938
MluCI AATT 3 cut(s) 308, 351, 887
MluNI TGGCCA 1 cut(s) 938
MlyI GAGTC 1 cut(s) 740
MmeI TCCRAC 1 cut(s) 170
MnlI CCTC 5 cut(s) 133, 502, 561, 772, 805
Mox20I TGGCCA 1 cut(s) 938
Mph1103I ATGCAT 1 cut(s) 548
MscI TGGCCA 1 cut(s) 938
MseI TTAA 2 cut(s) 119, 159
Msp20I TGGCCA 1 cut(s) 938
MspA1I CMGCKG 4 cut(s) 242, 319, 667, 833
MspR9I CCNGG 2 cut(s) 339, 411
MvaI CCWGG 2 cut(s) 339, 411
MvnI CGCG 1 cut(s) 514
MwoI GCNNNNNNNGC 4 cut(s) 248, 687, 691, 863
NcoI CCATGG 1 cut(s) 495
NdeI CATATG 1 cut(s) 505
NdeII GATC 7 cut(s) 96, 174, 415, 425, 460, 658, 907
NlaIV GGNNCC 1 cut(s) 144
NmuCI GTSAC 2 cut(s) 209, 370
NsiI ATGCAT 1 cut(s) 548
NspI RCATGY 4 cut(s) 217, 275, 362, 604
PasI CCCWGGG 1 cut(s) 410
PciI ACATGT 1 cut(s) 271
PfeI GAWTC 3 cut(s) 491, 736, 791
PkrI GCNGC 3 cut(s) 295, 666, 856
PleI GAGTC 1 cut(s) 739
PpsI GAGTC 1 cut(s) 739
PscI ACATGT 1 cut(s) 271
Psp6I CCWGG 2 cut(s) 337, 409
PspGI CCWGG 2 cut(s) 337, 409
PspN4I GGNNCC 1 cut(s) 144
PspPI GGNCC 3 cut(s) 164, 407, 435
PstI CTGCAG 1 cut(s) 873
PstNI CAGNNNCTG 2 cut(s) 667, 805
PsuI RGATCY 2 cut(s) 174, 415
PvuII CAGCTG 2 cut(s) 319, 667
RsaI GTAC 1 cut(s) 517
RsaNI GTAC 1 cut(s) 516
SaqAI TTAA 2 cut(s) 119, 159
SatI GCNGC 3 cut(s) 294, 665, 855
Sau3AI GATC 7 cut(s) 96, 174, 415, 425, 460, 658, 907
Sau96I GGNCC 3 cut(s) 164, 407, 435
SchI GAGTC 1 cut(s) 740
ScrFI CCNGG 2 cut(s) 339, 411
SduI GDGCHC 1 cut(s) 32
SetI ASST 7 cut(s) 184, 236, 298, 321, 482, 572, 669
SfaNI GCATC 1 cut(s) 703
SfcI CTRYAG 2 cut(s) 642, 869
SinI GGWCC 1 cut(s) 164
SmlI CTYRAG 1 cut(s) 728
SmoI CTYRAG 1 cut(s) 728
Sse9I AATT 3 cut(s) 308, 351, 887
SsiI CCGC 3 cut(s) 242, 785, 831
SspI AATATT 1 cut(s) 592
SspMI CTAG 2 cut(s) 179, 821
StyD4I CCNGG 2 cut(s) 337, 409
StyI CCWWGG 1 cut(s) 495
TaaI ACNGT 7 cut(s) 34, 376, 392, 447, 472, 554, 775
TaqI TCGA 2 cut(s) 424, 734
TasI AATT 3 cut(s) 308, 351, 887
TfiI GAWTC 3 cut(s) 491, 736, 791
Tru1I TTAA 2 cut(s) 119, 159
Tru9I TTAA 2 cut(s) 119, 159
TscAI CASTG 6 cut(s) 39, 78, 397, 728, 771, 810
TseFI GTSAC 2 cut(s) 209, 370
TseI GCWGC 3 cut(s) 293, 664, 854
Tsp45I GTSAC 2 cut(s) 209, 370
TspGWI ACGGA 3 cut(s) 23, 166, 191
TspRI CASTG 6 cut(s) 39, 78, 397, 728, 771, 810
VpaK11BI GGWCC 1 cut(s) 164
XapI RAATTY 1 cut(s) 887
XceI RCATGY 4 cut(s) 217, 275, 362, 604
XmiI GTMKAC 3 cut(s) 236, 378, 841
XspI CTAG 2 cut(s) 179, 821
Zsp2I ATGCAT 1 cut(s) 548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.