FvH4_4g31840

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000056
Physical Location & Seq
Reverse (-)
30786320 .. 30787033
714 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g31840.t1

Sequence Viewer

Length: 714 bp
ATGGAGGAGGAGGAGAGAGCCTATCTTCACGAAGCGTGGCAAAGAAAGGAACCCAGGCTGAGACACAGATTCGAGGAGGACAAGCTATTCATCATGTTGAAGCTCTTCAAGTGCATCGTATGGTGCCGTGAGAGAAGCCGTCCAATTACTAACTATAACGAAATCAAGATAGGCCAGAAACTTTTTAGAGTAAAGTTTTCTCATTTCAAGCAGCAATTATCTGAGAACGACAGCGATTGTTACGCAAGGATAATCTCCTTGGAACTGAATAAATTGCATGTCCCGGGATATGTACATCGTGCTATTGCTAGAAAGATATTCGACGTGGTTGAGGCTGCCGTCTCCCCTGAGGACCCGGTTGTAGTGTATGTGTTTGACTCCCTTTGGCGCTTCGGAGATGGACATGATGACCCATCTAGTCCCAATTTGTGGGACTGGGACGTCACGCACCGCGTCGGAGATGGACATGTTGAACCATCTAGGCCCAATTTGATTCCTGCGAGCAGGTCTTCAATCCTGGGTTTGGAGCCAGTGACAGTACTTGATACTGTTACTGAGTCTTCCTGTGCTGTTTGCTTGGAGGATTTTGAACAAGAACCGTTCACTCGGTTGCCCAGCATACACCAGTTTCATGTCCGCTGCATTGCTCAGTGCCTGGAGATTAATCATCTGTGTCCCCTCTGCCGGTACGCAATGCCAACAGAAGAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

238

Amino Acids

27.75

Weight (kDa)

5.68

Isoelectric Point (pI)

59.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 188 - 229 9.5e-07 Ring finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 440
AatII GACGTC 1 cut(s) 444
Acc36I ACCTGC 1 cut(s) 495
AccB1I GGYRCC 1 cut(s) 123
AccB7I CCANNNNNTGG 1 cut(s) 429
AccII CGCG 1 cut(s) 453
AciI CCGC 2 cut(s) 451, 637
AcyI GRCGYC 1 cut(s) 441
AfaI GTAC 3 cut(s) 294, 540, 689
AfiI CCNNNNNNNGG 3 cut(s) 429, 523, 684
AflIII ACRYGT 1 cut(s) 466
AgsI TTSAA 6 cut(s) 100, 109, 208, 473, 513, 590
AjiI CACGTC 1 cut(s) 325
AjnI CCWGG 3 cut(s) 53, 516, 654
AluBI AGCT 2 cut(s) 85, 103
AluI AGCT 2 cut(s) 85, 103
Alw26I GTCTC 2 cut(s) 55, 346
AlwNI CAGNNNCTG 1 cut(s) 655
Ama87I CYCGRG 1 cut(s) 283
AoxI GGCC 2 cut(s) 172, 482
ApeKI GCWGC 3 cut(s) 211, 335, 639
AseI ATTAAT 1 cut(s) 663
Asp700I GAANNNNTTC 1 cut(s) 104
AspLEI GCGC 1 cut(s) 390
AspS9I GGNCC 2 cut(s) 352, 483
AsuC2I CCSGG 3 cut(s) 284, 285, 356
AvaI CYCGRG 1 cut(s) 283
AvaII GGWCC 1 cut(s) 352
AxyI CCTNAGG 1 cut(s) 348
BanI GGYRCC 1 cut(s) 123
BbsI GAAGAC 2 cut(s) 501, 552
BbvI GCAGC 3 cut(s) 223, 322, 626
BccI CCATC 4 cut(s) 392, 421, 455, 484
BceAI ACGGC 3 cut(s) 111, 123, 323
BciT130I CCWGG 3 cut(s) 55, 518, 656
BcnI CCSGG 3 cut(s) 284, 285, 356
BcoDI GTCTC 2 cut(s) 55, 346
BfaI CTAG 3 cut(s) 309, 417, 480
BfoI RGCGCY 1 cut(s) 391
BfuAI ACCTGC 1 cut(s) 495
BisI GCNGC 3 cut(s) 212, 336, 640
BlsI GCNGC 3 cut(s) 213, 337, 641
BmcAI AGTACT 1 cut(s) 540
Bme1390I CCNGG 6 cut(s) 55, 284, 285, 356, 518, 656
Bme18I GGWCC 1 cut(s) 352
BmeT110I CYCGRG 1 cut(s) 283
BmgBI CACGTC 1 cut(s) 325
BmgT120I GGNCC 2 cut(s) 352, 483
BmiI GGNNCC 4 cut(s) 51, 125, 354, 528
BmrFI CCNGG 6 cut(s) 55, 284, 285, 356, 518, 656
BmrI ACTGGG 1 cut(s) 445
BmsI GCATC 1 cut(s) 123
BmuI ACTGGG 1 cut(s) 445
BpiI GAAGAC 2 cut(s) 501, 552
BpmI CTGGAG 1 cut(s) 677
BpuMI CCSGG 3 cut(s) 284, 285, 356
BsaHI GRCGYC 1 cut(s) 441
BsaJI CCNNGG 4 cut(s) 53, 258, 283, 517
Bsc4I CCNNNNNNNGG 3 cut(s) 429, 523, 684
Bse118I RCCGGY 1 cut(s) 684
Bse1I ACTGG 3 cut(s) 440, 530, 625
Bse21I CCTNAGG 1 cut(s) 348
Bse3DI GCAATG 2 cut(s) 642, 699
BseBI CCWGG 3 cut(s) 55, 518, 656
BseDI CCNNGG 4 cut(s) 53, 258, 283, 517
BseLI CCNNNNNNNGG 3 cut(s) 429, 523, 684
BseMI GCAATG 2 cut(s) 642, 699
BseMII CTCAG 5 cut(s) 50, 213, 339, 546, 662
BseNI ACTGG 3 cut(s) 440, 530, 625
BseRI GAGGAG 4 cut(s) 20, 23, 26, 89
BseXI GCAGC 3 cut(s) 223, 322, 626
BseYI CCCAGC 1 cut(s) 614
Bsh1236I CGCG 1 cut(s) 453
BshFI GGCC 2 cut(s) 174, 484
BshNI GGYRCC 1 cut(s) 123
BsiHKCI CYCGRG 1 cut(s) 283
BsiSI CCGG 3 cut(s) 284, 356, 685
BslFI GGGAC 5 cut(s) 266, 405, 446, 452, 660
BslI CCNNNNNNNGG 3 cut(s) 429, 523, 684
BsmAI GTCTC 2 cut(s) 55, 346
BsmBI CGTCTC 1 cut(s) 346
BsmFI GGGAC 5 cut(s) 266, 405, 446, 452, 660
BsnI GGCC 2 cut(s) 174, 484
BsoBI CYCGRG 1 cut(s) 283
Bsp1407I TGTACA 1 cut(s) 292
BspACI CCGC 2 cut(s) 451, 637
BspANI GGCC 2 cut(s) 174, 484
BspCNI CTCAG 5 cut(s) 51, 214, 340, 547, 661
BspFNI CGCG 1 cut(s) 453
BspLI GGNNCC 4 cut(s) 51, 125, 354, 528
BspMI ACCTGC 1 cut(s) 495
BspQI GCTCTTC 1 cut(s) 110
BspT107I GGYRCC 1 cut(s) 123
BsrDI GCAATG 2 cut(s) 642, 699
BsrFI RCCGGY 1 cut(s) 684
BsrGI TGTACA 1 cut(s) 292
BsrI ACTGG 3 cut(s) 440, 530, 625
BssAI RCCGGY 1 cut(s) 684
BssECI CCNNGG 4 cut(s) 53, 258, 283, 517
BssNI GRCGYC 1 cut(s) 441
BssT1I CCWWGG 1 cut(s) 258
Bst2UI CCWGG 3 cut(s) 55, 518, 656
Bst4CI ACNGT 3 cut(s) 538, 550, 600
Bst6I CTCTTC 1 cut(s) 110
BstACI GRCGYC 1 cut(s) 441
BstAUI TGTACA 1 cut(s) 292
BstC8I GCNNGC 1 cut(s) 502
BstDEI CTNAG 5 cut(s) 59, 222, 348, 555, 648
BstFNI CGCG 1 cut(s) 453
BstH2I RGCGCY 1 cut(s) 391
BstHHI GCGC 1 cut(s) 390
BstMAI GTCTC 2 cut(s) 55, 346
BstNI CCWGG 3 cut(s) 55, 518, 656
BstNSI RCATGY 2 cut(s) 281, 470
BstSCI CCNGG 6 cut(s) 53, 282, 283, 354, 516, 654
BstUI CGCG 1 cut(s) 453
BstV1I GCAGC 3 cut(s) 223, 322, 626
BstV2I GAAGAC 2 cut(s) 501, 552
Bsu36I CCTNAGG 1 cut(s) 348
BsuRI GGCC 2 cut(s) 174, 484
BtrI CACGTC 1 cut(s) 325
BtsIMutI CAGTG 2 cut(s) 537, 656
BveI ACCTGC 1 cut(s) 495
Cac8I GCNNGC 1 cut(s) 502
CaiI CAGNNNCTG 1 cut(s) 655
CfoI GCGC 1 cut(s) 390
Cfr10I RCCGGY 1 cut(s) 684
Cfr13I GGNCC 2 cut(s) 352, 483
Cfr9I CCCGGG 1 cut(s) 283
CseI GACGC 1 cut(s) 442
Csp6I GTAC 3 cut(s) 293, 539, 688
CviAII CATG 5 cut(s) 94, 278, 404, 467, 632
CviJI RGCY 9 cut(s) 20, 58, 85, 103, 138, 174, 335, 484, 529
CviKI_1 RGCY 9 cut(s) 20, 58, 85, 103, 138, 174, 335, 484, 529
CviQI GTAC 3 cut(s) 293, 539, 688
DdeI CTNAG 5 cut(s) 59, 222, 348, 555, 648
DrdI GACNNNNNNGTC 1 cut(s) 440
DseDI GACNNNNNNGTC 1 cut(s) 440
Eam1104I CTCTTC 1 cut(s) 110
EarI CTCTTC 1 cut(s) 110
Eco130I CCWWGG 1 cut(s) 258
Eco47I GGWCC 1 cut(s) 352
Eco81I CCTNAGG 1 cut(s) 348
Eco88I CYCGRG 1 cut(s) 283
EcoO109I RGGNCCY 1 cut(s) 352
EcoRII CCWGG 3 cut(s) 53, 516, 654
EcoT14I CCWWGG 1 cut(s) 258
ErhI CCWWGG 1 cut(s) 258
Esp3I CGTCTC 1 cut(s) 346
FaeI CATG 5 cut(s) 97, 281, 407, 470, 635
FaqI GGGAC 5 cut(s) 266, 405, 446, 452, 660
FatI CATG 5 cut(s) 93, 277, 403, 466, 631
Fnu4HI GCNGC 3 cut(s) 212, 336, 640
Fsp4HI GCNGC 3 cut(s) 212, 336, 640
FspBI CTAG 3 cut(s) 309, 417, 480
GlaI GCGC 1 cut(s) 389
GluI GCNGC 3 cut(s) 212, 336, 640
GsaI CCCAGC 1 cut(s) 618
GsuI CTGGAG 1 cut(s) 677
HaeII RGCGCY 1 cut(s) 391
HaeIII GGCC 2 cut(s) 174, 484
HapII CCGG 3 cut(s) 284, 356, 685
HgaI GACGC 1 cut(s) 442
HhaI GCGC 1 cut(s) 390
Hin1I GRCGYC 1 cut(s) 441
Hin1II CATG 5 cut(s) 97, 281, 407, 470, 635
Hin6I GCGC 1 cut(s) 388
HinP1I GCGC 1 cut(s) 388
HinfI GANTC 4 cut(s) 69, 377, 493, 557
HpaII CCGG 3 cut(s) 284, 356, 685
Hpy166II GTNNAC 1 cut(s) 603
Hpy188I TCNGA 3 cut(s) 223, 395, 458
Hpy188III TCNNGA 2 cut(s) 29, 166
Hpy8I GTNNAC 1 cut(s) 603
Hpy99I CGWCG 2 cut(s) 326, 458
HpyCH4III ACNGT 3 cut(s) 538, 550, 600
HpyCH4IV ACGT 2 cut(s) 324, 441
HpyCH4V TGCA 3 cut(s) 114, 277, 642
HpyF3I CTNAG 5 cut(s) 59, 222, 348, 555, 648
HpySE526I ACGT 2 cut(s) 324, 441
Hsp92I GRCGYC 1 cut(s) 441
Hsp92II CATG 5 cut(s) 97, 281, 407, 470, 635
HspAI GCGC 1 cut(s) 388
LguI GCTCTTC 1 cut(s) 110
LmnI GCTCC 1 cut(s) 526
Lsp1109I GCAGC 3 cut(s) 223, 322, 626
LweI GCATC 1 cut(s) 123
MaeI CTAG 3 cut(s) 309, 417, 480
MaeII ACGT 2 cut(s) 324, 441
MaeIII GTNAC 4 cut(s) 239, 442, 532, 550
MboII GAAGA 4 cut(s) 17, 97, 501, 552
MluCI AATT 5 cut(s) 144, 215, 272, 424, 487
MlyI GAGTC 2 cut(s) 371, 566
MmeI TCCRAC 1 cut(s) 436
MnlI CCTC 7 cut(s) 4, 67, 70, 325, 343, 574, 689
MroXI GAANNNNTTC 1 cut(s) 104
MseI TTAA 2 cut(s) 663, 712
MspA1I CMGCKG 1 cut(s) 639
MspI CCGG 3 cut(s) 284, 356, 685
MspR9I CCNGG 6 cut(s) 55, 284, 285, 356, 518, 656
MvaI CCWGG 3 cut(s) 55, 518, 656
MvnI CGCG 1 cut(s) 453
NciI CCSGG 3 cut(s) 284, 285, 356
NlaIII CATG 5 cut(s) 97, 281, 407, 470, 635
NlaIV GGNNCC 4 cut(s) 51, 125, 354, 528
NmuCI GTSAC 2 cut(s) 442, 532
NspI RCATGY 2 cut(s) 281, 470
PciI ACATGT 1 cut(s) 466
PciSI GCTCTTC 1 cut(s) 110
PdmI GAANNNNTTC 1 cut(s) 104
PfeI GAWTC 2 cut(s) 69, 493
PflMI CCANNNNNTGG 1 cut(s) 429
PkrI GCNGC 3 cut(s) 213, 337, 641
PleI GAGTC 2 cut(s) 371, 565
PpsI GAGTC 2 cut(s) 371, 565
PpuMI RGGWCCY 1 cut(s) 352
PscI ACATGT 1 cut(s) 466
PshBI ATTAAT 1 cut(s) 663
Psp5II RGGWCCY 1 cut(s) 352
Psp6I CCWGG 3 cut(s) 53, 516, 654
PspFI CCCAGC 1 cut(s) 614
PspGI CCWGG 3 cut(s) 53, 516, 654
PspN4I GGNNCC 4 cut(s) 51, 125, 354, 528
PspPI GGNCC 2 cut(s) 352, 483
PspPPI RGGWCCY 1 cut(s) 352
PstNI CAGNNNCTG 1 cut(s) 655
RsaI GTAC 3 cut(s) 294, 540, 689
RsaNI GTAC 3 cut(s) 293, 539, 688
SapI GCTCTTC 1 cut(s) 110
SaqAI TTAA 2 cut(s) 663, 712
SatI GCNGC 3 cut(s) 212, 336, 640
Sau96I GGNCC 2 cut(s) 352, 483
ScaI AGTACT 1 cut(s) 540
SchI GAGTC 2 cut(s) 371, 566
ScrFI CCNGG 6 cut(s) 55, 284, 285, 356, 518, 656
SetI ASST 5 cut(s) 87, 105, 327, 444, 509
SfaNI GCATC 1 cut(s) 123
SinI GGWCC 1 cut(s) 352
SmaI CCCGGG 1 cut(s) 285
Sse9I AATT 5 cut(s) 144, 215, 272, 424, 487
SsiI CCGC 2 cut(s) 451, 637
SspMI CTAG 3 cut(s) 309, 417, 480
StyD4I CCNGG 6 cut(s) 53, 282, 283, 354, 516, 654
StyI CCWWGG 1 cut(s) 258
TaaI ACNGT 3 cut(s) 538, 550, 600
TaiI ACGT 2 cut(s) 327, 444
TaqI TCGA 2 cut(s) 72, 321
TasI AATT 5 cut(s) 144, 215, 272, 424, 487
TatI WGTACW 2 cut(s) 292, 538
TfiI GAWTC 2 cut(s) 69, 493
Tru1I TTAA 2 cut(s) 663, 712
Tru9I TTAA 2 cut(s) 663, 712
TscAI CASTG 2 cut(s) 537, 656
TseFI GTSAC 2 cut(s) 442, 532
TseI GCWGC 3 cut(s) 211, 335, 639
Tsp45I GTSAC 2 cut(s) 442, 532
TspDTI ATGAA 2 cut(s) 79, 620
TspMI CCCGGG 1 cut(s) 283
TspRI CASTG 2 cut(s) 537, 656
Van91I CCANNNNNTGG 1 cut(s) 429
VpaK11BI GGWCC 1 cut(s) 352
VspI ATTAAT 1 cut(s) 663
XceI RCATGY 2 cut(s) 281, 470
XmaI CCCGGG 1 cut(s) 283
XmnI GAANNNNTTC 1 cut(s) 104
XspI CTAG 3 cut(s) 309, 417, 480
ZraI GACGTC 1 cut(s) 442
ZrmI AGTACT 1 cut(s) 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.