ubiquitin-protein transferase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-rbx1 | PF12678 | 173 - 223 | 4e-10 | RING-H2 zinc finger domain |
| zf-RING_2 | PF13639 | 173 - 223 | 9.1e-10 | Ring finger domain |
| zf-C3HC4 | PF00097 | 173 - 222 | 1.5e-06 | Zinc finger, C3HC4 type (RING finger) |
| zf-C3HC4_2 | PF13923 | 198 - 222 | 2.3e-07 | Zinc finger, C3HC4 type (RING finger) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 697 |
| AciI | CCGC | 4 cut(s) | 260, 319, 695, 697 |
| AcoI | YGGCCR | 1 cut(s) | 189 |
| AcsI | RAATTY | 1 cut(s) | 132 |
| AcyI | GRCGYC | 1 cut(s) | 512 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 21, 55, 178, 325 |
| AflIII | ACRYGT | 2 cut(s) | 604, 746 |
| AgsI | TTSAA | 6 cut(s) | 7, 46, 245, 266, 632, 690 |
| AluBI | AGCT | 2 cut(s) | 160, 236 |
| AluI | AGCT | 2 cut(s) | 160, 236 |
| Alw21I | GWGCWC | 1 cut(s) | 300 |
| Alw44I | GTGCAC | 1 cut(s) | 296 |
| Ama87I | CYCGRG | 1 cut(s) | 428 |
| AoxI | GGCC | 3 cut(s) | 189, 535, 692 |
| ApaLI | GTGCAC | 1 cut(s) | 296 |
| ApeKI | GCWGC | 4 cut(s) | 233, 443, 551, 740 |
| ApoI | RAATTY | 1 cut(s) | 132 |
| AseI | ATTAAT | 1 cut(s) | 645 |
| AspS9I | GGNCC | 3 cut(s) | 104, 112, 535 |
| AsuC2I | CCSGG | 3 cut(s) | 110, 193, 218 |
| AsuHPI | GGTGA | 1 cut(s) | 566 |
| AvaI | CYCGRG | 1 cut(s) | 428 |
| AvaII | GGWCC | 2 cut(s) | 104, 112 |
| BaeGI | GKGCMC | 1 cut(s) | 300 |
| BauI | CACGAG | 1 cut(s) | 652 |
| BbsI | GAAGAC | 1 cut(s) | 501 |
| Bbv12I | GWGCWC | 1 cut(s) | 300 |
| BbvCI | CCTCAGC | 1 cut(s) | 393 |
| BbvI | GCAGC | 4 cut(s) | 245, 455, 538, 727 |
| BccI | CCATC | 3 cut(s) | 272, 455, 563 |
| BceAI | ACGGC | 1 cut(s) | 499 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 530, 564 |
| BciVI | GTATCC | 1 cut(s) | 47 |
| BcnI | CCSGG | 3 cut(s) | 110, 193, 218 |
| BfaI | CTAG | 2 cut(s) | 336, 504 |
| BfmI | CTRYAG | 1 cut(s) | 552 |
| BfuI | GTATCC | 1 cut(s) | 47 |
| BisI | GCNGC | 6 cut(s) | 234, 444, 552, 695, 698, 741 |
| BlsI | GCNGC | 6 cut(s) | 235, 445, 553, 696, 699, 742 |
| Bme1390I | CCNGG | 3 cut(s) | 110, 193, 218 |
| Bme18I | GGWCC | 2 cut(s) | 104, 112 |
| BmeT110I | CYCGRG | 1 cut(s) | 428 |
| BmgT120I | GGNCC | 3 cut(s) | 104, 112, 535 |
| BmiI | GGNNCC | 2 cut(s) | 84, 106 |
| BmrFI | CCNGG | 3 cut(s) | 110, 193, 218 |
| BmsI | GCATC | 1 cut(s) | 330 |
| BpiI | GAAGAC | 1 cut(s) | 501 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 522, 554 |
| BpmI | CTGGAG | 1 cut(s) | 69 |
| Bpu10I | CCTNAGC | 1 cut(s) | 393 |
| BpuEI | CTTGAG | 2 cut(s) | 108, 659 |
| BpuMI | CCSGG | 3 cut(s) | 110, 193, 218 |
| Bsa29I | ATCGAT | 1 cut(s) | 276 |
| BsaAI | YACGTR | 2 cut(s) | 301, 747 |
| BsaHI | GRCGYC | 1 cut(s) | 512 |
| BsaJI | CCNNGG | 2 cut(s) | 108, 695 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 21, 55, 178, 325 |
| Bse1I | ACTGG | 2 cut(s) | 67, 172 |
| BseCI | ATCGAT | 1 cut(s) | 276 |
| BseDI | CCNNGG | 2 cut(s) | 108, 695 |
| BseGI | GGATG | 1 cut(s) | 313 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 21, 55, 178, 325 |
| BseMII | CTCAG | 1 cut(s) | 384 |
| BseNI | ACTGG | 2 cut(s) | 67, 172 |
| BseSI | GKGCMC | 1 cut(s) | 300 |
| BseXI | GCAGC | 4 cut(s) | 245, 455, 538, 727 |
| Bsh1236I | CGCG | 1 cut(s) | 697 |
| Bsh1285I | CGRYCG | 1 cut(s) | 276 |
| BshFI | GGCC | 3 cut(s) | 191, 537, 694 |
| BshVI | ATCGAT | 1 cut(s) | 276 |
| BsiEI | CGRYCG | 1 cut(s) | 276 |
| BsiHKAI | GWGCWC | 1 cut(s) | 300 |
| BsiHKCI | CYCGRG | 1 cut(s) | 428 |
| BsiSI | CCGG | 4 cut(s) | 110, 192, 218, 440 |
| BslFI | GGGAC | 3 cut(s) | 90, 200, 642 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 21, 55, 178, 325 |
| BsmFI | GGGAC | 3 cut(s) | 90, 200, 642 |
| BsnI | GGCC | 3 cut(s) | 191, 537, 694 |
| BsoBI | CYCGRG | 1 cut(s) | 428 |
| Bsp1286I | GDGCHC | 1 cut(s) | 300 |
| Bsp143I | GATC | 3 cut(s) | 226, 273, 541 |
| BspACI | CCGC | 4 cut(s) | 260, 319, 695, 697 |
| BspANI | GGCC | 3 cut(s) | 191, 537, 694 |
| BspCNI | CTCAG | 1 cut(s) | 385 |
| BspDI | ATCGAT | 1 cut(s) | 276 |
| BspFNI | CGCG | 1 cut(s) | 697 |
| BspHI | TCATGA | 1 cut(s) | 613 |
| BspLI | GGNNCC | 2 cut(s) | 84, 106 |
| BspMAI | CTGCAG | 1 cut(s) | 556 |
| BsrI | ACTGG | 2 cut(s) | 67, 172 |
| BssECI | CCNNGG | 2 cut(s) | 108, 695 |
| BssMI | GATC | 3 cut(s) | 226, 273, 541 |
| BssNI | GRCGYC | 1 cut(s) | 512 |
| BssSI | CACGAG | 1 cut(s) | 652 |
| Bst2BI | CACGAG | 1 cut(s) | 652 |
| Bst4CI | ACNGT | 1 cut(s) | 316 |
| Bst6I | CTCTTC | 1 cut(s) | 16 |
| BstACI | GRCGYC | 1 cut(s) | 512 |
| BstBAI | YACGTR | 2 cut(s) | 301, 747 |
| BstC8I | GCNNGC | 1 cut(s) | 593 |
| BstDEI | CTNAG | 2 cut(s) | 349, 393 |
| BstDSI | CCRYGG | 1 cut(s) | 695 |
| BstEII | GGTNACC | 1 cut(s) | 572 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 53 |
| BstF5I | GGATG | 1 cut(s) | 313 |
| BstFNI | CGCG | 1 cut(s) | 697 |
| BstKTI | GATC | 3 cut(s) | 229, 276, 544 |
| BstMBI | GATC | 3 cut(s) | 226, 273, 541 |
| BstMCI | CGRYCG | 1 cut(s) | 276 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 462, 597 |
| BstNSI | RCATGY | 1 cut(s) | 608 |
| BstPI | GGTNACC | 1 cut(s) | 572 |
| BstSCI | CCNGG | 3 cut(s) | 108, 191, 216 |
| BstSFI | CTRYAG | 1 cut(s) | 552 |
| BstSLI | GKGCMC | 1 cut(s) | 300 |
| BstUI | CGCG | 1 cut(s) | 697 |
| BstV1I | GCAGC | 4 cut(s) | 245, 455, 538, 727 |
| BstV2I | GAAGAC | 1 cut(s) | 501 |
| Bsu15I | ATCGAT | 1 cut(s) | 276 |
| BsuI | GTATCC | 1 cut(s) | 47 |
| BsuRI | GGCC | 3 cut(s) | 191, 537, 694 |
| BsuTUI | ATCGAT | 1 cut(s) | 276 |
| BtgI | CCRYGG | 1 cut(s) | 695 |
| BtsCI | GGATG | 1 cut(s) | 313 |
| BtsI | GCAGTG | 1 cut(s) | 674 |
| BtsIMutI | CAGTG | 2 cut(s) | 378, 674 |
| Cac8I | GCNNGC | 1 cut(s) | 593 |
| CciI | TCATGA | 1 cut(s) | 613 |
| Cfr13I | GGNCC | 3 cut(s) | 104, 112, 535 |
| Cfr42I | CCGCGG | 1 cut(s) | 698 |
| ClaI | ATCGAT | 1 cut(s) | 276 |
| CseI | GACGC | 1 cut(s) | 520 |
| CviAII | CATG | 5 cut(s) | 77, 372, 605, 614, 715 |
| DdeI | CTNAG | 2 cut(s) | 349, 393 |
| DpnI | GATC | 3 cut(s) | 228, 275, 543 |
| DpnII | GATC | 3 cut(s) | 226, 273, 541 |
| EaeI | YGGCCR | 1 cut(s) | 189 |
| Eam1104I | CTCTTC | 1 cut(s) | 16 |
| EarI | CTCTTC | 1 cut(s) | 16 |
| Eco47I | GGWCC | 2 cut(s) | 104, 112 |
| Eco88I | CYCGRG | 1 cut(s) | 428 |
| Eco91I | GGTNACC | 1 cut(s) | 572 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 53 |
| EcoO109I | RGGNCCY | 1 cut(s) | 535 |
| EcoO65I | GGTNACC | 1 cut(s) | 572 |
| FaeI | CATG | 5 cut(s) | 80, 375, 608, 617, 718 |
| FaqI | GGGAC | 3 cut(s) | 90, 200, 642 |
| FatI | CATG | 5 cut(s) | 76, 371, 604, 613, 714 |
| FauNDI | CATATG | 1 cut(s) | 421 |
| Fnu4HI | GCNGC | 6 cut(s) | 234, 444, 552, 695, 698, 741 |
| FokI | GGATG | 1 cut(s) | 320 |
| Fsp4HI | GCNGC | 6 cut(s) | 234, 444, 552, 695, 698, 741 |
| FspBI | CTAG | 2 cut(s) | 336, 504 |
| GluI | GCNGC | 6 cut(s) | 234, 444, 552, 695, 698, 741 |
| GsuI | CTGGAG | 1 cut(s) | 69 |
| HaeIII | GGCC | 3 cut(s) | 191, 537, 694 |
| HapII | CCGG | 4 cut(s) | 110, 192, 218, 440 |
| HgaI | GACGC | 1 cut(s) | 520 |
| Hin1I | GRCGYC | 1 cut(s) | 512 |
| Hin1II | CATG | 5 cut(s) | 80, 375, 608, 617, 718 |
| HinfI | GANTC | 2 cut(s) | 89, 480 |
| HpaII | CCGG | 4 cut(s) | 110, 192, 218, 440 |
| HphI | GGTGA | 1 cut(s) | 566 |
| Hpy166II | GTNNAC | 2 cut(s) | 298, 378 |
| Hpy188III | TCNNGA | 3 cut(s) | 86, 428, 614 |
| Hpy8I | GTNNAC | 2 cut(s) | 298, 378 |
| HpyCH4III | ACNGT | 1 cut(s) | 316 |
| HpyCH4IV | ACGT | 2 cut(s) | 300, 746 |
| HpyCH4V | TGCA | 4 cut(s) | 54, 298, 456, 554 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 462, 597 |
| HpyF3I | CTNAG | 2 cut(s) | 349, 393 |
| HpySE526I | ACGT | 2 cut(s) | 300, 746 |
| Hsp92I | GRCGYC | 1 cut(s) | 512 |
| Hsp92II | CATG | 5 cut(s) | 80, 375, 608, 617, 718 |
| KspI | CCGCGG | 1 cut(s) | 698 |
| Kzo9I | GATC | 3 cut(s) | 226, 273, 541 |
| LmnI | GCTCC | 1 cut(s) | 88 |
| Lsp1109I | GCAGC | 4 cut(s) | 245, 455, 538, 727 |
| LweI | GCATC | 1 cut(s) | 330 |
| MaeI | CTAG | 2 cut(s) | 336, 504 |
| MaeII | ACGT | 2 cut(s) | 300, 746 |
| MaeIII | GTNAC | 3 cut(s) | 58, 310, 572 |
| MalI | GATC | 3 cut(s) | 228, 275, 543 |
| MboI | GATC | 3 cut(s) | 226, 273, 541 |
| MboII | GAAGA | 5 cut(s) | 3, 236, 506, 629, 678 |
| MhlI | GDGCHC | 1 cut(s) | 300 |
| MluCI | AATT | 1 cut(s) | 132 |
| MnlI | CCTC | 7 cut(s) | 73, 125, 250, 372, 388, 526, 548 |
| MseI | TTAA | 1 cut(s) | 645 |
| MspA1I | CMGCKG | 1 cut(s) | 697 |
| MspI | CCGG | 4 cut(s) | 110, 192, 218, 440 |
| MspR9I | CCNGG | 3 cut(s) | 110, 193, 218 |
| MvnI | CGCG | 1 cut(s) | 697 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 462, 597 |
| NciI | CCSGG | 3 cut(s) | 110, 193, 218 |
| NdeI | CATATG | 1 cut(s) | 421 |
| NdeII | GATC | 3 cut(s) | 226, 273, 541 |
| NlaIII | CATG | 5 cut(s) | 80, 375, 608, 617, 718 |
| NlaIV | GGNNCC | 2 cut(s) | 84, 106 |
| NmuCI | GTSAC | 2 cut(s) | 310, 572 |
| NspI | RCATGY | 1 cut(s) | 608 |
| PagI | TCATGA | 1 cut(s) | 613 |
| PciI | ACATGT | 1 cut(s) | 604 |
| PfeI | GAWTC | 2 cut(s) | 89, 480 |
| PkrI | GCNGC | 6 cut(s) | 235, 445, 553, 696, 699, 742 |
| Ple19I | CGATCG | 1 cut(s) | 276 |
| Ppu21I | YACGTR | 2 cut(s) | 301, 747 |
| PscI | ACATGT | 1 cut(s) | 604 |
| PshBI | ATTAAT | 1 cut(s) | 645 |
| PspEI | GGTNACC | 1 cut(s) | 572 |
| PspN4I | GGNNCC | 2 cut(s) | 84, 106 |
| PspPI | GGNCC | 3 cut(s) | 104, 112, 535 |
| PstI | CTGCAG | 1 cut(s) | 556 |
| PvuI | CGATCG | 1 cut(s) | 276 |
| SacII | CCGCGG | 1 cut(s) | 698 |
| SaqAI | TTAA | 1 cut(s) | 645 |
| SatI | GCNGC | 6 cut(s) | 234, 444, 552, 695, 698, 741 |
| Sau3AI | GATC | 3 cut(s) | 226, 273, 541 |
| Sau96I | GGNCC | 3 cut(s) | 104, 112, 535 |
| ScrFI | CCNGG | 3 cut(s) | 110, 193, 218 |
| SduI | GDGCHC | 1 cut(s) | 300 |
| SetI | ASST | 9 cut(s) | 51, 60, 117, 162, 238, 303, 579, 749, 771 |
| SfaNI | GCATC | 1 cut(s) | 330 |
| SfcI | CTRYAG | 1 cut(s) | 552 |
| Sfr303I | CCGCGG | 1 cut(s) | 698 |
| SgrBI | CCGCGG | 1 cut(s) | 698 |
| SinI | GGWCC | 2 cut(s) | 104, 112 |
| SmlI | CTYRAG | 2 cut(s) | 123, 638 |
| SmoI | CTYRAG | 2 cut(s) | 123, 638 |
| Sse9I | AATT | 1 cut(s) | 132 |
| SsiI | CCGC | 4 cut(s) | 260, 319, 695, 697 |
| SspI | AATATT | 1 cut(s) | 252 |
| SspMI | CTAG | 2 cut(s) | 336, 504 |
| StyD4I | CCNGG | 3 cut(s) | 108, 191, 216 |
| TaaI | ACNGT | 1 cut(s) | 316 |
| TaiI | ACGT | 2 cut(s) | 303, 749 |
| TaqI | TCGA | 4 cut(s) | 276, 364, 483, 540 |
| TasI | AATT | 1 cut(s) | 132 |
| TauI | GCSGC | 2 cut(s) | 697, 700 |
| TfiI | GAWTC | 2 cut(s) | 89, 480 |
| Tru1I | TTAA | 1 cut(s) | 645 |
| Tru9I | TTAA | 1 cut(s) | 645 |
| TscAI | CASTG | 2 cut(s) | 385, 681 |
| TseFI | GTSAC | 2 cut(s) | 310, 572 |
| TseI | GCWGC | 4 cut(s) | 233, 443, 551, 740 |
| Tsp45I | GTSAC | 2 cut(s) | 310, 572 |
| TspDTI | ATGAA | 1 cut(s) | 630 |
| TspGWI | ACGGA | 1 cut(s) | 82 |
| TspRI | CASTG | 2 cut(s) | 385, 681 |
| VneI | GTGCAC | 1 cut(s) | 296 |
| VpaK11BI | GGWCC | 2 cut(s) | 104, 112 |
| VspI | ATTAAT | 1 cut(s) | 645 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 53 |
| XapI | RAATTY | 1 cut(s) | 132 |
| XceI | RCATGY | 1 cut(s) | 608 |
| XspI | CTAG | 2 cut(s) | 336, 504 |