RchiOBHm_Chr7g0194301

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000056
Physical Location & Seq
Forward (+)
12419094 .. 12422208
3115 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17375

Sequence Viewer

Length: 900 bp
ATGTCCCCTGAGAGGCATTATTTTTGGAGTGGTGCAACAGATACACATCCAAGAGATCCAAGGTTAGCACCCGAAATTAAAATCCCAAGCGGTGCGGATACAAAAATTAGACTGGGTTACTACAAGATATACGGACGAAGCTGGGTTGACACTCCAGATGCCACCGTTTTTTCTCCTGCAAAACTCATAGCTCGTACACTGCTTTTAGTTTCTCTCTCTTCTGTCAAGAAATCATCCAAAAGGCGTTATTATACCAAGCTGCTGGCCGAGCAACTTTCGAACATTGGTGTCCCGGGACATGAGCAGCCAGTTGTTCTTGAGAAACTATTTGGTGTGATTGATGTCACCGTCCCTGGGAGGCATATTATTGTGTTCTTAGGGGATGTGACCGTCCACCTCTTGGACAATGCAAGTAATCTTGGTGCAGGGGATGTCACTCTATCCTTATGGATTAATGGAAAGTATACTGATGATCAGCAAATTATGCTTCAAAGGCTTACAATGGAATCCAGGTATGATGTCCCCAAGGTTACTCCGGCAACTAAATCATCCATTGAGGACTTGGAGAAAGTGAGACTTGATAGTTTGGAAGCTACTTTTAGACAGATGCCATGTACTATTTGTATGGAGGGCCTTGATACCTCTGGTGATGTGAAAAAAGGGATTGATCATCAGCAGCAGCATGTGATTGCTCGCTTGCCTTGCTCGCATATCTATCATGAAGATTGCATTGTCCAGTGGCTCAAGACTAACCACAGGTGTCCCTTGTGTCGATCCCCAATTGTGGAATTGCACAAGGCATTGAAACCCCAATTGAGGCTGCATTGGCCATTGCTCATGATGTCTGCAGTTGGTATGCTGAGTGCTACACTCATTCCCAGATTGTTGAACCGGAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

299

Amino Acids

33.72

Weight (kDa)

9.06

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 205 - 258 1.5e-10 Ring finger domain
zf-rbx1 PF12678 205 - 258 1.6e-09 RING-H2 zinc finger domain
zf-C3HC4 PF00097 205 - 257 3.9e-06 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 205 - 255 8e-06 RING-type zinc-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 400
AccI GTMKAC 1 cut(s) 464
AciI CCGC 2 cut(s) 90, 95
AclWI GGATC 2 cut(s) 50, 768
AcoI YGGCCR 2 cut(s) 264, 827
AfaI GTAC 2 cut(s) 196, 616
AfiI CCNNNNNNNGG 5 cut(s) 12, 354, 400, 784, 816
AgsI TTSAA 3 cut(s) 491, 805, 889
AjnI CCWGG 2 cut(s) 352, 509
AluBI AGCT 5 cut(s) 141, 191, 259, 593, 897
AluI AGCT 5 cut(s) 141, 191, 259, 593, 897
Alw26I GTCTC 1 cut(s) 568
AlwI GGATC 2 cut(s) 50, 768
Ama87I CYCGRG 1 cut(s) 292
AoxI GGCC 3 cut(s) 264, 631, 827
ApeKI GCWGC 5 cut(s) 259, 304, 676, 679, 820
AseI ATTAAT 1 cut(s) 453
AspS9I GGNCC 1 cut(s) 631
AsuC2I CCSGG 2 cut(s) 293, 294
AsuHPI GGTGA 2 cut(s) 337, 659
AsuII TTCGAA 1 cut(s) 278
AvaI CYCGRG 1 cut(s) 292
BalI TGGCCA 1 cut(s) 829
BbvI GCAGC 5 cut(s) 246, 316, 688, 691, 807
BciT130I CCWGG 2 cut(s) 354, 511
BciVI GTATCC 1 cut(s) 91
BclI TGATCA 2 cut(s) 472, 667
BcnI CCSGG 2 cut(s) 293, 294
BcoDI GTCTC 1 cut(s) 568
BfmI CTRYAG 1 cut(s) 846
BfuI GTATCC 1 cut(s) 91
BisI GCNGC 5 cut(s) 260, 305, 677, 680, 821
BlsI GCNGC 5 cut(s) 261, 306, 678, 681, 822
Bme1390I CCNGG 4 cut(s) 293, 294, 354, 511
BmeT110I CYCGRG 1 cut(s) 292
BmgT120I GGNCC 1 cut(s) 631
BmrFI CCNGG 4 cut(s) 293, 294, 354, 511
BmrI ACTGGG 1 cut(s) 122
BmsI GCATC 2 cut(s) 148, 597
BmuI ACTGGG 1 cut(s) 122
BpmI CTGGAG 1 cut(s) 138
Bpu14I TTCGAA 1 cut(s) 278
BpuEI CTTGAG 2 cut(s) 338, 728
BpuMI CCSGG 2 cut(s) 293, 294
BsaBI GATNNNNATC 1 cut(s) 45
BsaJI CCNNGG 5 cut(s) 59, 292, 352, 353, 525
BsaWI WCCGGW 1 cut(s) 891
Bsc4I CCNNNNNNNGG 5 cut(s) 12, 354, 400, 784, 816
Bse1I ACTGG 3 cut(s) 117, 308, 736
Bse3DI GCAATG 1 cut(s) 830
Bse8I GATNNNNATC 1 cut(s) 45
BseBI CCWGG 2 cut(s) 354, 511
BseDI CCNNGG 5 cut(s) 59, 292, 352, 353, 525
BseGI GGATG 5 cut(s) 46, 233, 388, 436, 548
BseJI GATNNNNATC 1 cut(s) 45
BseLI CCNNNNNNNGG 5 cut(s) 12, 354, 400, 784, 816
BseMI GCAATG 1 cut(s) 830
BseMII CTCAG 1 cut(s) 851
BseNI ACTGG 3 cut(s) 117, 308, 736
BseXI GCAGC 5 cut(s) 246, 316, 688, 691, 807
BseYI CCCAGC 1 cut(s) 141
BsgI GTGCAG 1 cut(s) 444
BshFI GGCC 3 cut(s) 266, 633, 829
BsiHKCI CYCGRG 1 cut(s) 292
BsiSI CCGG 3 cut(s) 293, 536, 892
BslFI GGGAC 5 cut(s) 275, 309, 335, 506, 747
BslI CCNNNNNNNGG 5 cut(s) 12, 354, 400, 784, 816
BsmAI GTCTC 1 cut(s) 568
BsmFI GGGAC 5 cut(s) 275, 309, 335, 506, 747
BsnI GGCC 3 cut(s) 266, 633, 829
BsoBI CYCGRG 1 cut(s) 292
Bsp119I TTCGAA 1 cut(s) 278
Bsp143I GATC 4 cut(s) 55, 472, 667, 773
BspACI CCGC 2 cut(s) 90, 95
BspANI GGCC 3 cut(s) 266, 633, 829
BspCNI CTCAG 1 cut(s) 852
BspHI TCATGA 2 cut(s) 718, 837
BspMAI CTGCAG 1 cut(s) 850
BspPI GGATC 2 cut(s) 50, 768
BspT104I TTCGAA 1 cut(s) 278
BsrDI GCAATG 1 cut(s) 830
BsrI ACTGG 3 cut(s) 117, 308, 736
BssECI CCNNGG 5 cut(s) 59, 292, 352, 353, 525
BssMI GATC 4 cut(s) 55, 472, 667, 773
BssNAI GTATAC 1 cut(s) 465
BssT1I CCWWGG 2 cut(s) 59, 525
Bst1107I GTATAC 1 cut(s) 465
Bst2UI CCWGG 2 cut(s) 354, 511
Bst4CI ACNGT 3 cut(s) 166, 349, 391
Bst6I CTCTTC 1 cut(s) 223
BstAPI GCANNNNNTGC 1 cut(s) 484
BstBI TTCGAA 1 cut(s) 278
BstC8I GCNNGC 4 cut(s) 264, 694, 698, 707
BstDEI CTNAG 3 cut(s) 9, 376, 860
BstF5I GGATG 5 cut(s) 46, 233, 388, 436, 548
BstKTI GATC 4 cut(s) 58, 475, 670, 776
BstMAI GTCTC 1 cut(s) 568
BstMBI GATC 4 cut(s) 55, 472, 667, 773
BstMWI GCNNNNNNNGC 6 cut(s) 268, 484, 493, 702, 706, 826
BstNI CCWGG 2 cut(s) 354, 511
BstNSI RCATGY 1 cut(s) 686
BstSCI CCNGG 4 cut(s) 291, 292, 352, 509
BstSFI CTRYAG 1 cut(s) 846
BstV1I GCAGC 5 cut(s) 246, 316, 688, 691, 807
BstX2I RGATCY 1 cut(s) 55
BstXI CCANNNNNNTGG 1 cut(s) 262
BstYI RGATCY 1 cut(s) 55
BstZ17I GTATAC 1 cut(s) 465
BsuI GTATCC 1 cut(s) 91
BsuRI GGCC 3 cut(s) 266, 633, 829
BtsCI GGATG 5 cut(s) 46, 233, 388, 436, 548
BtsI GCAGTG 1 cut(s) 197
BtsIMutI CAGTG 2 cut(s) 197, 743
Cac8I GCNNGC 4 cut(s) 264, 694, 698, 707
CciI TCATGA 2 cut(s) 718, 837
Cfr13I GGNCC 1 cut(s) 631
Cfr9I CCCGGG 1 cut(s) 292
Csp6I GTAC 2 cut(s) 195, 615
CviAII CATG 5 cut(s) 299, 612, 683, 719, 838
CviQI GTAC 2 cut(s) 195, 615
DdeI CTNAG 3 cut(s) 9, 376, 860
DpnI GATC 4 cut(s) 57, 474, 669, 775
DpnII GATC 4 cut(s) 55, 472, 667, 773
EaeI YGGCCR 2 cut(s) 264, 827
Eam1104I CTCTTC 1 cut(s) 223
EarI CTCTTC 1 cut(s) 223
Eco130I CCWWGG 2 cut(s) 59, 525
Eco88I CYCGRG 1 cut(s) 292
EcoO109I RGGNCCY 1 cut(s) 631
EcoRII CCWGG 2 cut(s) 352, 509
EcoT14I CCWWGG 2 cut(s) 59, 525
ErhI CCWWGG 2 cut(s) 59, 525
FaeI CATG 5 cut(s) 302, 615, 686, 722, 841
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 5 cut(s) 275, 309, 335, 506, 747
FatI CATG 5 cut(s) 298, 611, 682, 718, 837
FbaI TGATCA 2 cut(s) 472, 667
FblI GTMKAC 1 cut(s) 464
Fnu4HI GCNGC 5 cut(s) 260, 305, 677, 680, 821
FokI GGATG 5 cut(s) 33, 220, 395, 443, 535
Fsp4HI GCNGC 5 cut(s) 260, 305, 677, 680, 821
GluI GCNGC 5 cut(s) 260, 305, 677, 680, 821
GsaI CCCAGC 1 cut(s) 145
GsuI CTGGAG 1 cut(s) 138
HaeIII GGCC 3 cut(s) 266, 633, 829
HapII CCGG 3 cut(s) 293, 536, 892
Hin1II CATG 5 cut(s) 302, 615, 686, 722, 841
HincII GTYRAC 1 cut(s) 148
HindII GTYRAC 1 cut(s) 148
HinfI GANTC 1 cut(s) 506
HpaII CCGG 3 cut(s) 293, 536, 892
HphI GGTGA 2 cut(s) 337, 659
Hpy166II GTNNAC 4 cut(s) 148, 197, 394, 465
Hpy188III TCNNGA 6 cut(s) 155, 226, 317, 719, 745, 838
Hpy8I GTNNAC 4 cut(s) 148, 197, 394, 465
HpyCH4III ACNGT 3 cut(s) 166, 349, 391
HpyCH4V TGCA 8 cut(s) 35, 179, 410, 425, 729, 793, 823, 848
HpyF10VI GCNNNNNNNGC 6 cut(s) 268, 484, 493, 702, 706, 826
HpyF3I CTNAG 3 cut(s) 9, 376, 860
Hsp92II CATG 5 cut(s) 302, 615, 686, 722, 841
Ksp22I TGATCA 2 cut(s) 472, 667
Kzo9I GATC 4 cut(s) 55, 472, 667, 773
LmnI GCTCC 1 cut(s) 894
Lsp1109I GCAGC 5 cut(s) 246, 316, 688, 691, 807
LweI GCATC 2 cut(s) 148, 597
MaeIII GTNAC 5 cut(s) 116, 343, 385, 433, 529
MalI GATC 4 cut(s) 57, 474, 669, 775
MboI GATC 4 cut(s) 55, 472, 667, 773
MboII GAAGA 2 cut(s) 210, 734
MfeI CAATTG 2 cut(s) 780, 812
MflI RGATCY 1 cut(s) 55
MlsI TGGCCA 1 cut(s) 829
MluCI AATT 6 cut(s) 75, 105, 480, 780, 788, 812
MluNI TGGCCA 1 cut(s) 829
MnlI CCTC 7 cut(s) 6, 351, 407, 550, 622, 652, 810
Mox20I TGGCCA 1 cut(s) 829
MscI TGGCCA 1 cut(s) 829
MseI TTAA 2 cut(s) 78, 453
Msp20I TGGCCA 1 cut(s) 829
MspI CCGG 3 cut(s) 293, 536, 892
MspR9I CCNGG 4 cut(s) 293, 294, 354, 511
MunI CAATTG 2 cut(s) 780, 812
MvaI CCWGG 2 cut(s) 354, 511
MwoI GCNNNNNNNGC 6 cut(s) 268, 484, 493, 702, 706, 826
NciI CCSGG 2 cut(s) 293, 294
NdeII GATC 4 cut(s) 55, 472, 667, 773
NlaIII CATG 5 cut(s) 302, 615, 686, 722, 841
NmeAIII GCCGAG 1 cut(s) 292
NmuCI GTSAC 3 cut(s) 343, 385, 433
NspI RCATGY 1 cut(s) 686
NspV TTCGAA 1 cut(s) 278
PagI TCATGA 2 cut(s) 718, 837
PasI CCCWGGG 1 cut(s) 353
PfeI GAWTC 1 cut(s) 506
PflMI CCANNNNNTGG 1 cut(s) 400
PkrI GCNGC 5 cut(s) 261, 306, 678, 681, 822
PshBI ATTAAT 1 cut(s) 453
Psp6I CCWGG 2 cut(s) 352, 509
PspFI CCCAGC 1 cut(s) 141
PspGI CCWGG 2 cut(s) 352, 509
PspPI GGNCC 1 cut(s) 631
PstI CTGCAG 1 cut(s) 850
PsuI RGATCY 1 cut(s) 55
RsaI GTAC 2 cut(s) 196, 616
RsaNI GTAC 2 cut(s) 195, 615
SaqAI TTAA 2 cut(s) 78, 453
SatI GCNGC 5 cut(s) 260, 305, 677, 680, 821
Sau3AI GATC 4 cut(s) 55, 472, 667, 773
Sau96I GGNCC 1 cut(s) 631
ScrFI CCNGG 4 cut(s) 293, 294, 354, 511
SfaNI GCATC 2 cut(s) 148, 597
SfcI CTRYAG 1 cut(s) 846
SfuI TTCGAA 1 cut(s) 278
SmaI CCCGGG 1 cut(s) 294
SmlI CTYRAG 2 cut(s) 317, 743
SmoI CTYRAG 2 cut(s) 317, 743
Sse9I AATT 6 cut(s) 75, 105, 480, 780, 788, 812
SsiI CCGC 2 cut(s) 90, 95
StyD4I CCNGG 4 cut(s) 291, 292, 352, 509
StyI CCWWGG 2 cut(s) 59, 525
TaaI ACNGT 3 cut(s) 166, 349, 391
TaqI TCGA 2 cut(s) 278, 772
TasI AATT 6 cut(s) 75, 105, 480, 780, 788, 812
TatI WGTACW 1 cut(s) 614
TfiI GAWTC 1 cut(s) 506
Tru1I TTAA 2 cut(s) 78, 453
Tru9I TTAA 2 cut(s) 78, 453
TscAI CASTG 2 cut(s) 204, 743
TseFI GTSAC 3 cut(s) 343, 385, 433
TseI GCWGC 5 cut(s) 259, 304, 676, 679, 820
Tsp45I GTSAC 3 cut(s) 343, 385, 433
TspDTI ATGAA 1 cut(s) 735
TspGWI ACGGA 1 cut(s) 147
TspMI CCCGGG 1 cut(s) 292
TspRI CASTG 2 cut(s) 204, 743
Van91I CCANNNNNTGG 1 cut(s) 400
VspI ATTAAT 1 cut(s) 453
XceI RCATGY 1 cut(s) 686
XcmI CCANNNNNNNNNTGG 1 cut(s) 559
XmaI CCCGGG 1 cut(s) 292
XmiI GTMKAC 1 cut(s) 464
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.