Rorug02G0566500

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000056
Physical Location & Seq
Forward (+)
69128616 .. 69130661
2046 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0566500.1

Sequence Viewer

Length: 1059 bp
ATGGCGACTCCGACCCATTTGCTTAAGGATGAGCTCGACATTGTGATCCCTACCATACGAAACCTCGACTTCCTCGAGATGTGGAGGCCGTTCCTCCAGCCCTACCACTTGATCATTGTCCAGGACGGCGACCCCACCAAGACCATCAAGGTCCCCGAGGGATTTGACTATGAACTCTACAACCGTAACGACATTAACAGAATGCTTGGCCCTCGCTCCAATTGCATTTCCTTTAAGGACTCCGCTTGCCGTTGCTTCGGTTACATGGTCTCCAAGAAGAAGTACATCTTCACCATTGACGATGATTGCTTTGTTGCACAAGACCCATCTGGCAAACTAGTGAATGCACTGGAGCAGCACATCAAGAACCTTCTTTGCCCATCCACCCCATTTTTCTTCAACACCCTCTATGACCCTTTCAGAGAGGGTGCGGATTTCGTCCGTGGATACCCTTTCAGTCTCCGTGAGGGTGTCCCAACTGCTGTTTCTCATGGTCTTTGGCTCAATATCCCCGATTATGATGCACCTACTCAGCTTGTGAAGCCTCTTGAGAGGAACACCAGGTATGTGGATGCTGTTCTGACAATTCCAAAAGGCACCCTGTTCCCCATGTGTGGTATGAATTTGGCTTTCGACCGTGATCTCATTGGCCCTGCAATGTACTTCGGACTCATGGGTGATGGCCAGCCAATTGGACGTTACGATGATATGTGGGCTGGCTGGTGTATCAAGGTGATCTGTGACCATTTGGGGCTGGGAGTGAAGACAGGTCTGCCTTATATCTATCACAGCAAGGCAAGTAACCCATTTGTGAACCTGAGGAAGGAATACAAAGGCATCTTCTGGCAGGAAGAGATCATCCCTTTCTTCCAGGCCGCTGTTCTCCCCAAGGACTGCACCACTGTGCAAGCCTGCTACATCGAACTGTCCAAACAGGTGAAGGACAAGCTCGGCAAGGTAGATCCCTACTTTGACAAGCTGGCCGATGCCATGGTCACATGGATTGAAGCTTGGGATGAGCTCAACCCAAGCGGACCTGGTGCTAAAATAGCAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

352

Amino Acids

40.08

Weight (kDa)

5.74

Isoelectric Point (pI)

33.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RGP PF03214 8 - 342 9.7e-179 Reversibly glycosylated polypeptide
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 596
AciI CCGC 4 cut(s) 243, 431, 876, 1032
AclWI GGATC 2 cut(s) 40, 956
AcoI YGGCCR 2 cut(s) 682, 981
AcsI RAATTY 1 cut(s) 622
AfaI GTAC 2 cut(s) 284, 662
AfiI CCNNNNNNNGG 2 cut(s) 614, 823
AflII CTTAAG 1 cut(s) 23
AgsI TTSAA 2 cut(s) 400, 1007
AhlI ACTAGT 1 cut(s) 337
AjnI CCWGG 4 cut(s) 120, 560, 870, 1036
AjuI GAANNNNNNNTTGG 2 cut(s) 469, 501
AleI CACNNNNGTG 1 cut(s) 902
AluBI AGCT 6 cut(s) 34, 535, 949, 979, 1010, 1021
AluI AGCT 6 cut(s) 34, 535, 949, 979, 1010, 1021
Alw21I GWGCWC 2 cut(s) 36, 1023
Alw26I GTCTC 2 cut(s) 274, 464
AlwI GGATC 2 cut(s) 40, 956
Ama87I CYCGRG 2 cut(s) 74, 155
AoxI GGCC 6 cut(s) 86, 208, 649, 682, 873, 981
ApeKI GCWGC 1 cut(s) 355
ApoI RAATTY 1 cut(s) 622
AspS9I GGNCC 4 cut(s) 151, 209, 650, 1034
AsuHPI GGTGA 4 cut(s) 283, 689, 745, 949
AvaI CYCGRG 2 cut(s) 74, 155
AvaII GGWCC 2 cut(s) 151, 1034
AxyI CCTNAGG 1 cut(s) 818
BalI TGGCCA 1 cut(s) 684
BanI GGYRCC 1 cut(s) 596
BanII GRGCYC 2 cut(s) 36, 1023
BbsI GAAGAC 1 cut(s) 770
Bbv12I GWGCWC 2 cut(s) 36, 1023
BbvI GCAGC 1 cut(s) 367
BccI CCATC 4 cut(s) 152, 334, 388, 674
BceAI ACGGC 3 cut(s) 73, 142, 234
BcgI CGANNNNNNTGC 3 cut(s) 35, 503, 537
BciT130I CCWGG 4 cut(s) 122, 562, 872, 1038
BciVI GTATCC 1 cut(s) 440
BclI TGATCA 1 cut(s) 111
BcoDI GTCTC 2 cut(s) 274, 464
BcuI ACTAGT 1 cut(s) 337
BfaI CTAG 1 cut(s) 338
BfrI CTTAAG 1 cut(s) 23
BfuI GTATCC 1 cut(s) 440
BisI GCNGC 2 cut(s) 356, 876
BlsI GCNGC 2 cut(s) 357, 877
Bme1390I CCNGG 4 cut(s) 122, 562, 872, 1038
Bme18I GGWCC 2 cut(s) 151, 1034
BmeT110I CYCGRG 2 cut(s) 74, 155
BmgT120I GGNCC 4 cut(s) 151, 209, 650, 1034
BmiI GGNNCC 2 cut(s) 153, 598
BmrFI CCNGG 4 cut(s) 122, 562, 872, 1038
BmsI GCATC 4 cut(s) 511, 562, 846, 976
BpiI GAAGAC 1 cut(s) 770
BpmI CTGGAG 2 cut(s) 80, 371
BpuEI CTTGAG 1 cut(s) 569
BsaI GGTCTC 1 cut(s) 274
BsaJI CCNNGG 4 cut(s) 156, 442, 888, 990
BsaXI ACNNNNNCTCC 2 cut(s) 254, 284
Bsc4I CCNNNNNNNGG 2 cut(s) 614, 823
Bse1I ACTGG 1 cut(s) 354
Bse21I CCTNAGG 1 cut(s) 818
Bse3DI GCAATG 1 cut(s) 663
BseBI CCWGG 4 cut(s) 122, 562, 872, 1038
BseDI CCNNGG 4 cut(s) 156, 442, 888, 990
BseGI GGATG 5 cut(s) 34, 380, 577, 858, 1021
BseLI CCNNNNNNNGG 2 cut(s) 614, 823
BseMI GCAATG 1 cut(s) 663
BseMII CTCAG 2 cut(s) 545, 809
BseNI ACTGG 1 cut(s) 354
BseXI GCAGC 1 cut(s) 367
BseYI CCCAGC 1 cut(s) 754
BsgI GTGCAG 1 cut(s) 880
Bsh1285I CGRYCG 1 cut(s) 637
BshFI GGCC 6 cut(s) 88, 210, 651, 684, 875, 983
BshNI GGYRCC 1 cut(s) 596
BsiEI CGRYCG 1 cut(s) 637
BsiHKAI GWGCWC 2 cut(s) 36, 1023
BsiHKCI CYCGRG 2 cut(s) 74, 155
BslFI GGGAC 2 cut(s) 137, 458
BslI CCNNNNNNNGG 2 cut(s) 614, 823
BsmAI GTCTC 2 cut(s) 274, 464
BsmFI GGGAC 2 cut(s) 137, 458
BsmI GAATGC 2 cut(s) 207, 349
BsnI GGCC 6 cut(s) 88, 210, 651, 684, 875, 983
Bso31I GGTCTC 1 cut(s) 274
BsoBI CYCGRG 2 cut(s) 74, 155
Bsp1286I GDGCHC 2 cut(s) 36, 1023
Bsp143I GATC 6 cut(s) 45, 111, 640, 735, 855, 961
Bsp19I CCATGG 1 cut(s) 990
BspACI CCGC 4 cut(s) 243, 431, 876, 1032
BspANI GGCC 6 cut(s) 88, 210, 651, 684, 875, 983
BspCNI CTCAG 2 cut(s) 544, 810
BspLI GGNNCC 2 cut(s) 153, 598
BspPI GGATC 2 cut(s) 40, 956
BspT107I GGYRCC 1 cut(s) 596
BspTI CTTAAG 1 cut(s) 23
BspTNI GGTCTC 1 cut(s) 274
BsrDI GCAATG 1 cut(s) 663
BsrI ACTGG 1 cut(s) 354
BssECI CCNNGG 4 cut(s) 156, 442, 888, 990
BssMI GATC 6 cut(s) 45, 111, 640, 735, 855, 961
BssT1I CCWWGG 2 cut(s) 888, 990
Bst2UI CCWGG 4 cut(s) 122, 562, 872, 1038
Bst4CI ACNGT 4 cut(s) 185, 638, 904, 927
Bst6I CTCTTC 1 cut(s) 846
BstAFI CTTAAG 1 cut(s) 23
BstC8I GCNNGC 6 cut(s) 247, 686, 718, 909, 913, 981
BstDEI CTNAG 2 cut(s) 531, 818
BstDSI CCRYGG 2 cut(s) 442, 990
BstENI CCTNNNNNAGG 1 cut(s) 821
BstF5I GGATG 5 cut(s) 34, 380, 577, 858, 1021
BstKTI GATC 6 cut(s) 48, 114, 643, 738, 858, 964
BstMAI GTCTC 2 cut(s) 274, 464
BstMBI GATC 6 cut(s) 45, 111, 640, 735, 855, 961
BstMCI CGRYCG 1 cut(s) 637
BstMWI GCNNNNNNNGC 3 cut(s) 222, 541, 1049
BstNI CCWGG 4 cut(s) 122, 562, 872, 1038
BstSCI CCNGG 4 cut(s) 120, 560, 870, 1036
BstV1I GCAGC 1 cut(s) 367
BstV2I GAAGAC 1 cut(s) 770
BstX2I RGATCY 1 cut(s) 961
BstXI CCANNNNNNTGG 2 cut(s) 568, 692
BstYI RGATCY 1 cut(s) 961
Bsu36I CCTNAGG 1 cut(s) 818
BsuI GTATCC 1 cut(s) 440
BsuRI GGCC 6 cut(s) 88, 210, 651, 684, 875, 983
BtgI CCRYGG 2 cut(s) 442, 990
BtsCI GGATG 5 cut(s) 34, 380, 577, 858, 1021
BtsIMutI CAGTG 2 cut(s) 347, 900
Cac8I GCNNGC 6 cut(s) 247, 686, 718, 909, 913, 981
Cfr13I GGNCC 4 cut(s) 151, 209, 650, 1034
CsiI ACCWGGT 2 cut(s) 560, 1036
Csp6I GTAC 2 cut(s) 283, 661
CviAII CATG 6 cut(s) 265, 491, 610, 673, 991, 999
CviQI GTAC 2 cut(s) 283, 661
DdeI CTNAG 2 cut(s) 531, 818
DpnI GATC 6 cut(s) 47, 113, 642, 737, 857, 963
DpnII GATC 6 cut(s) 45, 111, 640, 735, 855, 961
EaeI YGGCCR 2 cut(s) 682, 981
Eam1104I CTCTTC 1 cut(s) 846
EarI CTCTTC 1 cut(s) 846
Ecl136II GAGCTC 2 cut(s) 34, 1021
Eco130I CCWWGG 2 cut(s) 888, 990
Eco24I GRGCYC 2 cut(s) 36, 1023
Eco31I GGTCTC 1 cut(s) 274
Eco47I GGWCC 2 cut(s) 151, 1034
Eco53kI GAGCTC 2 cut(s) 34, 1021
Eco81I CCTNAGG 1 cut(s) 818
Eco88I CYCGRG 2 cut(s) 74, 155
EcoICRI GAGCTC 2 cut(s) 34, 1021
EcoNI CCTNNNNNAGG 1 cut(s) 821
EcoO109I RGGNCCY 1 cut(s) 151
EcoRII CCWGG 4 cut(s) 120, 560, 870, 1036
EcoT14I CCWWGG 2 cut(s) 888, 990
EcoT38I GRGCYC 2 cut(s) 36, 1023
ErhI CCWWGG 2 cut(s) 888, 990
FaeI CATG 6 cut(s) 268, 494, 613, 676, 994, 1002
FalI AAGNNNNNCTT 2 cut(s) 272, 304
FaqI GGGAC 2 cut(s) 137, 458
FatI CATG 6 cut(s) 264, 490, 609, 672, 990, 998
FbaI TGATCA 1 cut(s) 111
Fnu4HI GCNGC 2 cut(s) 356, 876
FokI GGATG 5 cut(s) 41, 367, 584, 845, 1028
FriOI GRGCYC 2 cut(s) 36, 1023
Fsp4HI GCNGC 2 cut(s) 356, 876
FspBI CTAG 1 cut(s) 338
GluI GCNGC 2 cut(s) 356, 876
GsaI CCCAGC 1 cut(s) 758
GsuI CTGGAG 2 cut(s) 80, 371
HaeIII GGCC 6 cut(s) 88, 210, 651, 684, 875, 983
Hin1II CATG 6 cut(s) 268, 494, 613, 676, 994, 1002
HindIII AAGCTT 1 cut(s) 1008
HinfI GANTC 3 cut(s) 7, 239, 669
HphI GGTGA 4 cut(s) 283, 689, 745, 949
Hpy166II GTNNAC 1 cut(s) 814
Hpy188I TCNGA 4 cut(s) 12, 422, 582, 668
Hpy188III TCNNGA 3 cut(s) 76, 364, 548
Hpy8I GTNNAC 1 cut(s) 814
HpyAV CCTTC 3 cut(s) 380, 817, 934
HpyCH4III ACNGT 4 cut(s) 185, 638, 904, 927
HpyCH4IV ACGT 1 cut(s) 697
HpyCH4V TGCA 7 cut(s) 225, 317, 347, 524, 656, 897, 907
HpyF10VI GCNNNNNNNGC 3 cut(s) 222, 541, 1049
HpyF3I CTNAG 2 cut(s) 531, 818
HpySE526I ACGT 1 cut(s) 697
Hsp92II CATG 6 cut(s) 268, 494, 613, 676, 994, 1002
Ksp22I TGATCA 1 cut(s) 111
Kzo9I GATC 6 cut(s) 45, 111, 640, 735, 855, 961
LmnI GCTCC 2 cut(s) 221, 352
Lsp1109I GCAGC 1 cut(s) 367
LweI GCATC 4 cut(s) 511, 562, 846, 976
MabI ACCWGGT 2 cut(s) 560, 1036
MaeI CTAG 1 cut(s) 338
MaeII ACGT 1 cut(s) 697
MaeIII GTNAC 6 cut(s) 185, 260, 698, 740, 800, 994
MalI GATC 6 cut(s) 47, 113, 642, 737, 857, 963
MboI GATC 6 cut(s) 45, 111, 640, 735, 855, 961
MboII GAAGA 7 cut(s) 280, 289, 388, 775, 832, 859, 863
MfeI CAATTG 2 cut(s) 220, 690
MflI RGATCY 1 cut(s) 961
MhlI GDGCHC 2 cut(s) 36, 1023
MlsI TGGCCA 1 cut(s) 684
MluCI AATT 4 cut(s) 220, 585, 622, 690
MluNI TGGCCA 1 cut(s) 684
MlyI GAGTC 2 cut(s) 233, 663
MmeI TCCRAC 1 cut(s) 35
Mox20I TGGCCA 1 cut(s) 684
MscI TGGCCA 1 cut(s) 684
MseI TTAA 3 cut(s) 24, 195, 234
MslI CAYNNNNRTG 1 cut(s) 902
Msp20I TGGCCA 1 cut(s) 684
MspA1I CMGCKG 1 cut(s) 878
MspCI CTTAAG 1 cut(s) 23
MspR9I CCNGG 4 cut(s) 122, 562, 872, 1038
MunI CAATTG 2 cut(s) 220, 690
Mva1269I GAATGC 2 cut(s) 207, 349
MvaI CCWGG 4 cut(s) 122, 562, 872, 1038
MwoI GCNNNNNNNGC 3 cut(s) 222, 541, 1049
NcoI CCATGG 1 cut(s) 990
NdeII GATC 6 cut(s) 45, 111, 640, 735, 855, 961
NlaIII CATG 6 cut(s) 268, 494, 613, 676, 994, 1002
NlaIV GGNNCC 2 cut(s) 153, 598
NmeAIII GCCGAG 1 cut(s) 930
NmuCI GTSAC 2 cut(s) 740, 994
OliI CACNNNNGTG 1 cut(s) 902
PaeR7I CTCGAG 1 cut(s) 74
PcsI WCGNNNNNNNCGW 1 cut(s) 72
PctI GAATGC 2 cut(s) 207, 349
PfoI TCCNGGA 1 cut(s) 120
PkrI GCNGC 2 cut(s) 357, 877
PleI GAGTC 2 cut(s) 233, 663
PpsI GAGTC 2 cut(s) 233, 663
PpuMI RGGWCCY 1 cut(s) 151
Psp124BI GAGCTC 2 cut(s) 36, 1023
Psp5II RGGWCCY 1 cut(s) 151
Psp6I CCWGG 4 cut(s) 120, 560, 870, 1036
PspFI CCCAGC 1 cut(s) 754
PspGI CCWGG 4 cut(s) 120, 560, 870, 1036
PspN4I GGNNCC 2 cut(s) 153, 598
PspPI GGNCC 4 cut(s) 151, 209, 650, 1034
PspPPI RGGWCCY 1 cut(s) 151
PsuI RGATCY 1 cut(s) 961
RsaI GTAC 2 cut(s) 284, 662
RsaNI GTAC 2 cut(s) 283, 661
RseI CAYNNNNRTG 1 cut(s) 902
SacI GAGCTC 2 cut(s) 36, 1023
SaqAI TTAA 3 cut(s) 24, 195, 234
SatI GCNGC 2 cut(s) 356, 876
Sau3AI GATC 6 cut(s) 45, 111, 640, 735, 855, 961
Sau96I GGNCC 4 cut(s) 151, 209, 650, 1034
SchI GAGTC 2 cut(s) 233, 663
ScrFI CCNGG 4 cut(s) 122, 562, 872, 1038
SduI GDGCHC 2 cut(s) 36, 1023
SexAI ACCWGGT 2 cut(s) 560, 1036
SfaNI GCATC 4 cut(s) 511, 562, 846, 976
Sfr274I CTCGAG 1 cut(s) 74
SinI GGWCC 2 cut(s) 151, 1034
SlaI CTCGAG 1 cut(s) 74
SmiMI CAYNNNNRTG 1 cut(s) 902
SmlI CTYRAG 3 cut(s) 23, 74, 548
SmoI CTYRAG 3 cut(s) 23, 74, 548
SpeI ACTAGT 1 cut(s) 337
Sse9I AATT 4 cut(s) 220, 585, 622, 690
SsiI CCGC 4 cut(s) 243, 431, 876, 1032
SspMI CTAG 1 cut(s) 338
SstI GAGCTC 2 cut(s) 36, 1023
StyD4I CCNGG 4 cut(s) 120, 560, 870, 1036
StyI CCWWGG 2 cut(s) 888, 990
TaaI ACNGT 4 cut(s) 185, 638, 904, 927
TaiI ACGT 1 cut(s) 700
TaqI TCGA 5 cut(s) 36, 66, 75, 633, 921
TasI AATT 4 cut(s) 220, 585, 622, 690
TatI WGTACW 2 cut(s) 282, 660
TauI GCSGC 1 cut(s) 878
Tru1I TTAA 3 cut(s) 24, 195, 234
Tru9I TTAA 3 cut(s) 24, 195, 234
TscAI CASTG 2 cut(s) 354, 907
TseFI GTSAC 2 cut(s) 740, 994
TseI GCWGC 1 cut(s) 355
Tsp45I GTSAC 2 cut(s) 740, 994
TspDTI ATGAA 2 cut(s) 186, 635
TspGWI ACGGA 2 cut(s) 431, 452
TspRI CASTG 2 cut(s) 354, 907
Vha464I CTTAAG 1 cut(s) 23
VpaK11BI GGWCC 2 cut(s) 151, 1034
XagI CCTNNNNNAGG 1 cut(s) 821
XapI RAATTY 1 cut(s) 622
XhoI CTCGAG 1 cut(s) 74
XspI CTAG 1 cut(s) 338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.