FvH4_2g01511

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000056
Physical Location & Seq
Forward (+)
1390607 .. 1391422
816 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g01511.t1

Sequence Viewer

Length: 729 bp
ATGTCCGCAGATCAGAGGCATATATTTCGTTGCGCAGTAGTGCAAGTGCCAACAAGACGACGAGATATACCCAGCTGTGAGGGTAAAATTCCAGTTGTGATAAGTCTCTTCAAGGAAACTCGGCTTTGGTATGATGGTCCACAAGACTATGAAATGGATGGTGAGCGAACCTTGGTGGCTACACAAGGACTTCTGACGTATCCTGAACACATGAGTCACTTTGTGGCTCAACAGCTTTTGGTTATGTCTGTCCCAGAAGAACAAGTGCCACCTATTATTGAGAAACTTGATAAAAAGCTTTCCGTGGTCAGTGATTGGATTGCAAGACAACCTTGTGGGTATCTAGGCCATCGCATTACAGGACCTGAGGATCGCATTAGACGAGCTCGCACTAGAGGAGCTCGCATTCGAGGAGCTGAGGATGATATGGTTATAGCTACACAGGAATCCATTGCATCATATAAGGCCAATCTCACTCCTGCAACTAGATCATTCATTCATGGTTTGAAGAAATTAAGACTTGATGGTTTGGAAGAAGCTGTTATTAGAAAGACTCCAACTTGTGCCATCTGTCTTCAGGATTTTGCAGAATCTGTTGAAGAACTGATCACTTGCTTGCCCTGCAAACACTATTTTCATGTCAATTGCATTGTCCTGTGCCTCGAGATCAATCACATCTGCTCCTATTGTCGATACCCGATGCCAACTCTGGAGGCCGGTGAGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

243

Amino Acids

27.51

Weight (kDa)

6.7

Isoelectric Point (pI)

55.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 187 - 231 2.9e-07 Ring finger domain
zf-RING_11 PF17123 188 - 217 4.5e-08 RING-like zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 34
AciI CCGC 1 cut(s) 6
AclWI GGATC 1 cut(s) 378
AcsI RAATTY 1 cut(s) 87
AcuI CTGAAG 1 cut(s) 560
AdeI CACNNNGTG 1 cut(s) 223
AgsI TTSAA 3 cut(s) 112, 508, 599
AluBI AGCT 8 cut(s) 75, 235, 298, 386, 401, 416, 437, 539
AluI AGCT 8 cut(s) 75, 235, 298, 386, 401, 416, 437, 539
Alw21I GWGCWC 2 cut(s) 388, 403
Alw26I GTCTC 1 cut(s) 110
AlwI GGATC 1 cut(s) 378
AlwNI CAGNNNCTG 2 cut(s) 365, 593
Ama87I CYCGRG 1 cut(s) 662
AoxI GGCC 3 cut(s) 346, 465, 714
ApoI RAATTY 1 cut(s) 87
AspLEI GCGC 1 cut(s) 35
AspS9I GGNCC 2 cut(s) 137, 362
AsuHPI GGTGA 1 cut(s) 173
AvaI CYCGRG 1 cut(s) 662
AvaII GGWCC 2 cut(s) 137, 362
AxyI CCTNAGG 1 cut(s) 366
BanII GRGCYC 2 cut(s) 388, 403
BbsI GAAGAC 1 cut(s) 566
Bbv12I GWGCWC 2 cut(s) 388, 403
BbvCI CCTCAGC 1 cut(s) 417
BccI CCATC 5 cut(s) 128, 152, 357, 518, 575
BcgI CGANNNNNNTGC 2 cut(s) 8, 42
BciVI GTATCC 1 cut(s) 210
BclI TGATCA 1 cut(s) 606
BcoDI GTCTC 1 cut(s) 110
BfaI CTAG 3 cut(s) 344, 393, 486
BfuI GTATCC 1 cut(s) 210
Bme18I GGWCC 2 cut(s) 137, 362
BmeT110I CYCGRG 1 cut(s) 662
BmgT120I GGNCC 2 cut(s) 137, 362
BmsI GCATC 2 cut(s) 464, 690
BpiI GAAGAC 1 cut(s) 566
Bpu10I CCTNAGC 1 cut(s) 417
BsaJI CCNNGG 2 cut(s) 171, 303
BsaXI ACNNNNNCTCC 2 cut(s) 665, 695
Bse118I RCCGGY 1 cut(s) 716
Bse1I ACTGG 1 cut(s) 92
Bse21I CCTNAGG 1 cut(s) 366
Bse3DI GCAATG 1 cut(s) 450
BseDI CCNNGG 2 cut(s) 171, 303
BseGI GGATG 2 cut(s) 163, 427
BseMI GCAATG 1 cut(s) 450
BseMII CTCAG 2 cut(s) 357, 408
BseNI ACTGG 1 cut(s) 92
BseRI GAGGAG 2 cut(s) 411, 426
BseYI CCCAGC 1 cut(s) 71
BshFI GGCC 3 cut(s) 348, 467, 716
BsiHKAI GWGCWC 2 cut(s) 388, 403
BsiHKCI CYCGRG 1 cut(s) 662
BsiSI CCGG 1 cut(s) 717
BslFI GGGAC 1 cut(s) 236
BsmAI GTCTC 1 cut(s) 110
BsmFI GGGAC 1 cut(s) 236
BsmI GAATGC 1 cut(s) 405
BsnI GGCC 3 cut(s) 348, 467, 716
BsoBI CYCGRG 1 cut(s) 662
Bsp1286I GDGCHC 2 cut(s) 388, 403
Bsp143I GATC 5 cut(s) 10, 370, 488, 606, 666
BspACI CCGC 1 cut(s) 6
BspANI GGCC 3 cut(s) 348, 467, 716
BspCNI CTCAG 2 cut(s) 358, 409
BspPI GGATC 1 cut(s) 378
BsrDI GCAATG 1 cut(s) 450
BsrFI RCCGGY 1 cut(s) 716
BsrI ACTGG 1 cut(s) 92
BssAI RCCGGY 1 cut(s) 716
BssECI CCNNGG 2 cut(s) 171, 303
BssMI GATC 5 cut(s) 10, 370, 488, 606, 666
BssT1I CCWWGG 1 cut(s) 171
Bst6I CTCTTC 1 cut(s) 113
BstC8I GCNNGC 3 cut(s) 388, 403, 617
BstDEI CTNAG 2 cut(s) 366, 417
BstDSI CCRYGG 1 cut(s) 303
BstF5I GGATG 2 cut(s) 163, 427
BstHHI GCGC 1 cut(s) 35
BstKTI GATC 5 cut(s) 13, 373, 491, 609, 669
BstMAI GTCTC 1 cut(s) 110
BstMBI GATC 5 cut(s) 10, 370, 488, 606, 666
BstMWI GCNNNNNNNGC 1 cut(s) 621
BstV2I GAAGAC 1 cut(s) 566
Bsu36I CCTNAGG 1 cut(s) 366
BsuI GTATCC 1 cut(s) 210
BsuRI GGCC 3 cut(s) 348, 467, 716
BtgI CCRYGG 1 cut(s) 303
BtgZI GCGATG 1 cut(s) 335
BtsCI GGATG 2 cut(s) 163, 427
BtsIMutI CAGTG 1 cut(s) 316
Cac8I GCNNGC 3 cut(s) 388, 403, 617
CaiI CAGNNNCTG 2 cut(s) 365, 593
CfoI GCGC 1 cut(s) 35
Cfr10I RCCGGY 1 cut(s) 716
Cfr13I GGNCC 2 cut(s) 137, 362
CviAII CATG 4 cut(s) 211, 500, 638, 726
DdeI CTNAG 2 cut(s) 366, 417
DpnI GATC 5 cut(s) 12, 372, 490, 608, 668
DpnII GATC 5 cut(s) 10, 370, 488, 606, 666
DraIII CACNNNGTG 1 cut(s) 223
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
Ecl136II GAGCTC 2 cut(s) 386, 401
Eco130I CCWWGG 1 cut(s) 171
Eco24I GRGCYC 2 cut(s) 388, 403
Eco47I GGWCC 2 cut(s) 137, 362
Eco53kI GAGCTC 2 cut(s) 386, 401
Eco57I CTGAAG 1 cut(s) 560
Eco81I CCTNAGG 1 cut(s) 366
Eco88I CYCGRG 1 cut(s) 662
EcoICRI GAGCTC 2 cut(s) 386, 401
EcoO109I RGGNCCY 1 cut(s) 362
EcoT14I CCWWGG 1 cut(s) 171
EcoT38I GRGCYC 2 cut(s) 388, 403
ErhI CCWWGG 1 cut(s) 171
FaeI CATG 4 cut(s) 214, 503, 641, 729
FalI AAGNNNNNCTT 2 cut(s) 316, 348
FaqI GGGAC 1 cut(s) 236
FatI CATG 4 cut(s) 210, 499, 637, 725
FbaI TGATCA 1 cut(s) 606
FokI GGATG 2 cut(s) 170, 434
FriOI GRGCYC 2 cut(s) 388, 403
FspBI CTAG 3 cut(s) 344, 393, 486
FspI TGCGCA 1 cut(s) 34
GlaI GCGC 1 cut(s) 34
GsaI CCCAGC 1 cut(s) 75
HaeIII GGCC 3 cut(s) 348, 467, 716
HapII CCGG 1 cut(s) 717
HhaI GCGC 1 cut(s) 35
Hin1II CATG 4 cut(s) 214, 503, 641, 729
Hin6I GCGC 1 cut(s) 33
HinP1I GCGC 1 cut(s) 33
HindIII AAGCTT 1 cut(s) 296
HinfI GANTC 4 cut(s) 214, 446, 553, 590
HpaII CCGG 1 cut(s) 717
HphI GGTGA 1 cut(s) 173
Hpy166II GTNNAC 1 cut(s) 140
Hpy188I TCNGA 2 cut(s) 15, 195
Hpy188III TCNNGA 4 cut(s) 203, 578, 664, 710
Hpy8I GTNNAC 1 cut(s) 140
Hpy99I CGWCG 1 cut(s) 63
HpyCH4IV ACGT 1 cut(s) 197
HpyCH4V TGCA 7 cut(s) 43, 323, 455, 482, 587, 624, 648
HpyF10VI GCNNNNNNNGC 1 cut(s) 621
HpyF3I CTNAG 2 cut(s) 366, 417
HpySE526I ACGT 1 cut(s) 197
Hsp92II CATG 4 cut(s) 214, 503, 641, 729
HspAI GCGC 1 cut(s) 33
Ksp22I TGATCA 1 cut(s) 606
Kzo9I GATC 5 cut(s) 10, 370, 488, 606, 666
LmnI GCTCC 3 cut(s) 398, 413, 686
LweI GCATC 2 cut(s) 464, 690
MaeI CTAG 3 cut(s) 344, 393, 486
MaeII ACGT 1 cut(s) 197
MaeIII GTNAC 1 cut(s) 215
MalI GATC 5 cut(s) 12, 372, 490, 608, 668
MboI GATC 5 cut(s) 10, 370, 488, 606, 666
MboII GAAGA 6 cut(s) 100, 269, 520, 545, 566, 611
MfeI CAATTG 1 cut(s) 643
MhlI GDGCHC 2 cut(s) 388, 403
MluCI AATT 3 cut(s) 87, 512, 643
MlyI GAGTC 2 cut(s) 223, 547
MmeI TCCRAC 1 cut(s) 581
MnlI CCTC 8 cut(s) 9, 73, 361, 389, 404, 412, 671, 706
MseI TTAA 1 cut(s) 515
MspA1I CMGCKG 1 cut(s) 75
MspI CCGG 1 cut(s) 717
MunI CAATTG 1 cut(s) 643
Mva1269I GAATGC 1 cut(s) 405
MwoI GCNNNNNNNGC 1 cut(s) 621
NdeII GATC 5 cut(s) 10, 370, 488, 606, 666
NlaIII CATG 4 cut(s) 214, 503, 641, 729
NmeAIII GCCGAG 1 cut(s) 100
NmuCI GTSAC 1 cut(s) 215
NsbI TGCGCA 1 cut(s) 34
PaeR7I CTCGAG 1 cut(s) 662
PcsI WCGNNNNNNNCGW 1 cut(s) 379
PctI GAATGC 1 cut(s) 405
PfeI GAWTC 2 cut(s) 446, 590
PleI GAGTC 2 cut(s) 222, 547
PpsI GAGTC 2 cut(s) 222, 547
PpuMI RGGWCCY 1 cut(s) 362
Psp124BI GAGCTC 2 cut(s) 388, 403
Psp5II RGGWCCY 1 cut(s) 362
PspFI CCCAGC 1 cut(s) 71
PspPI GGNCC 2 cut(s) 137, 362
PspPPI RGGWCCY 1 cut(s) 362
PstNI CAGNNNCTG 2 cut(s) 365, 593
PvuII CAGCTG 1 cut(s) 75
SacI GAGCTC 2 cut(s) 388, 403
SaqAI TTAA 1 cut(s) 515
Sau3AI GATC 5 cut(s) 10, 370, 488, 606, 666
Sau96I GGNCC 2 cut(s) 137, 362
SchI GAGTC 2 cut(s) 223, 547
SduI GDGCHC 2 cut(s) 388, 403
SfaNI GCATC 2 cut(s) 464, 690
Sfr274I CTCGAG 1 cut(s) 662
SinI GGWCC 2 cut(s) 137, 362
SlaI CTCGAG 1 cut(s) 662
SmlI CTYRAG 1 cut(s) 662
SmoI CTYRAG 1 cut(s) 662
Sse9I AATT 3 cut(s) 87, 512, 643
SsiI CCGC 1 cut(s) 6
SspMI CTAG 3 cut(s) 344, 393, 486
SstI GAGCTC 2 cut(s) 388, 403
StyI CCWWGG 1 cut(s) 171
TaiI ACGT 1 cut(s) 200
TaqI TCGA 3 cut(s) 409, 663, 691
TasI AATT 3 cut(s) 87, 512, 643
TfiI GAWTC 2 cut(s) 446, 590
Tru1I TTAA 1 cut(s) 515
Tru9I TTAA 1 cut(s) 515
TscAI CASTG 1 cut(s) 316
TseFI GTSAC 1 cut(s) 215
Tsp45I GTSAC 1 cut(s) 215
TspDTI ATGAA 4 cut(s) 165, 484, 488, 626
TspGWI ACGGA 1 cut(s) 292
TspRI CASTG 1 cut(s) 316
VpaK11BI GGWCC 2 cut(s) 137, 362
XapI RAATTY 1 cut(s) 87
XhoI CTCGAG 1 cut(s) 662
XspI CTAG 3 cut(s) 344, 393, 486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.