FvH4_6g51740

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000056
Physical Location & Seq
Forward (+)
38301530 .. 38302746
1217 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g51740.t1

Sequence Viewer

Length: 696 bp
ATGGCTGTTGTAGAGGGATTCAGGTATGTTCATCATGTGGTTCAACAAAGCGAACCCGACCGAGAAGGGTGGGAAGAGGACAAGCTTCTCATCATATTCAAGCTCTTCAAGATAAGTATACGTCGCCGTCACAGTCACGCTCGAATTCATTATCGAGATAAGAATCAAATTGATGAAAAGGATATGTGGGCTAGTTTCTCCGATTTCAAGCATCAAGTTTCAGCATCCAATCCTAATAGAAATACGGAGGTCTATGAGCAGCAGATCTGCAGTTATCTTTCAACTATGTCCGTGCCGGAAGATAAACATCCGGCCATTATTCAAAAGTTATTCCGGGTGGTAGAGGCGGCGGAGACCTCTCAAGTCCCTGTTATTGTAAATGTATGGCACGCCCACGGCAGGATTGGGCCATACACCCGGCGAGTAGGTCGTCAAGTTGGACCCAAATTCACTCCTGCAGCTACATCCGCAATCGAGGGTTTGAGGTCACTTGTGCATTTAAAGGATTCTGTTTTTCGACAGACGCCCTCGTGTGCTATTTGCTTGGAGGATTTTGATGTTCTTGACCAACAAGAACTCCCCATTACTGGATTGCCCTGCCAGCACCATTTTCATGTACATTGCATTGTTCAGTGCCTGGAGATCAGCCACCTGTGCCCCCTATGCCGATACGCGATGCCAACACAAGAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

232

Amino Acids

26.69

Weight (kDa)

6.73

Isoelectric Point (pI)

47.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 177 - 223 3e-10 Ring finger domain
zf-RING_11 PF17123 178 - 209 5.1e-07 RING-like zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 118
AccII CGCG 1 cut(s) 674
AciI CCGC 3 cut(s) 347, 350, 468
AcoI YGGCCR 1 cut(s) 312
AcsI RAATTY 2 cut(s) 144, 446
AcyI GRCGYC 1 cut(s) 524
AfaI GTAC 1 cut(s) 618
AfiI CCNNNNNNNGG 2 cut(s) 399, 587
AgsI TTSAA 6 cut(s) 44, 100, 109, 208, 282, 323
AjnI CCWGG 1 cut(s) 636
AluBI AGCT 3 cut(s) 85, 103, 461
AluI AGCT 3 cut(s) 85, 103, 461
Alw26I GTCTC 1 cut(s) 347
AlwNI CAGNNNCTG 1 cut(s) 637
AoxI GGCC 2 cut(s) 312, 407
ApeKI GCWGC 2 cut(s) 259, 458
ApoI RAATTY 2 cut(s) 144, 446
AspS9I GGNCC 2 cut(s) 407, 440
AsuC2I CCSGG 2 cut(s) 335, 418
AvaII GGWCC 1 cut(s) 440
BaeGI GKGCMC 1 cut(s) 659
BauI CACGAG 1 cut(s) 529
BbvI GCAGC 2 cut(s) 271, 470
BceAI ACGGC 2 cut(s) 111, 412
BciT130I CCWGG 1 cut(s) 638
BcnI CCSGG 2 cut(s) 335, 418
BcoDI GTCTC 1 cut(s) 347
BfaI CTAG 1 cut(s) 192
BfmI CTRYAG 2 cut(s) 268, 456
BglII AGATCT 1 cut(s) 264
BisI GCNGC 3 cut(s) 260, 348, 459
BlsI GCNGC 3 cut(s) 261, 349, 460
Bme1390I CCNGG 3 cut(s) 335, 418, 638
Bme18I GGWCC 1 cut(s) 440
BmgT120I GGNCC 2 cut(s) 407, 440
BmiI GGNNCC 1 cut(s) 442
BmrFI CCNGG 3 cut(s) 335, 418, 638
BmsI GCATC 3 cut(s) 220, 233, 666
BpmI CTGGAG 1 cut(s) 659
BpuEI CTTGAG 1 cut(s) 345
BpuMI CCSGG 2 cut(s) 335, 418
BsaBI GATNNNNATC 2 cut(s) 162, 306
BsaHI GRCGYC 1 cut(s) 524
BsaI GGTCTC 1 cut(s) 347
BsaJI CCNNGG 1 cut(s) 394
BsaXI ACNNNNNCTCC 2 cut(s) 561, 591
Bsc4I CCNNNNNNNGG 2 cut(s) 399, 587
Bse1I ACTGG 1 cut(s) 592
Bse3DI GCAATG 1 cut(s) 619
Bse8I GATNNNNATC 2 cut(s) 162, 306
BseBI CCWGG 1 cut(s) 638
BseDI CCNNGG 1 cut(s) 394
BseGI GGATG 3 cut(s) 224, 307, 464
BseJI GATNNNNATC 2 cut(s) 162, 306
BseLI CCNNNNNNNGG 2 cut(s) 399, 587
BseMI GCAATG 1 cut(s) 619
BseNI ACTGG 1 cut(s) 592
BseSI GKGCMC 1 cut(s) 659
BseXI GCAGC 2 cut(s) 271, 470
Bsh1236I CGCG 1 cut(s) 674
Bsh1285I CGRYCG 1 cut(s) 61
BshFI GGCC 2 cut(s) 314, 409
BsiEI CGRYCG 1 cut(s) 61
BsiSI CCGG 4 cut(s) 296, 311, 334, 418
BslFI GGGAC 1 cut(s) 350
BslI CCNNNNNNNGG 2 cut(s) 399, 587
BsmAI GTCTC 1 cut(s) 347
BsmFI GGGAC 1 cut(s) 350
BsnI GGCC 2 cut(s) 314, 409
Bso31I GGTCTC 1 cut(s) 347
Bsp1286I GDGCHC 1 cut(s) 659
Bsp1407I TGTACA 1 cut(s) 616
Bsp143I GATC 2 cut(s) 264, 642
BspACI CCGC 3 cut(s) 347, 350, 468
BspANI GGCC 2 cut(s) 314, 409
BspFNI CGCG 1 cut(s) 674
BspLI GGNNCC 1 cut(s) 442
BspMAI CTGCAG 2 cut(s) 272, 460
BspQI GCTCTTC 1 cut(s) 110
BspTNI GGTCTC 1 cut(s) 347
BsrDI GCAATG 1 cut(s) 619
BsrGI TGTACA 1 cut(s) 616
BsrI ACTGG 1 cut(s) 592
BssECI CCNNGG 1 cut(s) 394
BssMI GATC 2 cut(s) 264, 642
BssNAI GTATAC 1 cut(s) 119
BssNI GRCGYC 1 cut(s) 524
BssSI CACGAG 1 cut(s) 529
Bst1107I GTATAC 1 cut(s) 119
Bst2BI CACGAG 1 cut(s) 529
Bst2UI CCWGG 1 cut(s) 638
Bst4CI ACNGT 1 cut(s) 134
Bst6I CTCTTC 2 cut(s) 69, 110
BstACI GRCGYC 1 cut(s) 524
BstAUI TGTACA 1 cut(s) 616
BstC8I GCNNGC 2 cut(s) 390, 602
BstDSI CCRYGG 1 cut(s) 394
BstF5I GGATG 3 cut(s) 224, 307, 464
BstFNI CGCG 1 cut(s) 674
BstKTI GATC 2 cut(s) 267, 645
BstMAI GTCTC 1 cut(s) 347
BstMBI GATC 2 cut(s) 264, 642
BstMCI CGRYCG 1 cut(s) 61
BstMWI GCNNNNNNNGC 4 cut(s) 467, 601, 654, 663
BstNI CCWGG 1 cut(s) 638
BstSCI CCNGG 3 cut(s) 333, 416, 636
BstSFI CTRYAG 2 cut(s) 268, 456
BstSLI GKGCMC 1 cut(s) 659
BstUI CGCG 1 cut(s) 674
BstV1I GCAGC 2 cut(s) 271, 470
BstX2I RGATCY 1 cut(s) 264
BstYI RGATCY 1 cut(s) 264
BstZ17I GTATAC 1 cut(s) 119
BsuRI GGCC 2 cut(s) 314, 409
BtgI CCRYGG 1 cut(s) 394
BtgZI GCGATG 1 cut(s) 689
BtsCI GGATG 3 cut(s) 224, 307, 464
BtsIMutI CAGTG 1 cut(s) 638
Cac8I GCNNGC 2 cut(s) 390, 602
CaiI CAGNNNCTG 1 cut(s) 637
Cfr13I GGNCC 2 cut(s) 407, 440
CseI GACGC 1 cut(s) 532
Csp6I GTAC 1 cut(s) 617
CviAII CATG 2 cut(s) 35, 614
CviJI RGCY 8 cut(s) 5, 85, 103, 191, 314, 409, 461, 648
CviKI_1 RGCY 8 cut(s) 5, 85, 103, 191, 314, 409, 461, 648
CviQI GTAC 1 cut(s) 617
DpnI GATC 2 cut(s) 266, 644
DpnII GATC 2 cut(s) 264, 642
DraI TTTAAA 1 cut(s) 501
EaeI YGGCCR 1 cut(s) 312
Eam1104I CTCTTC 2 cut(s) 69, 110
EarI CTCTTC 2 cut(s) 69, 110
EciI GGCGGA 1 cut(s) 365
Eco31I GGTCTC 1 cut(s) 347
Eco47I GGWCC 1 cut(s) 440
EcoRI GAATTC 1 cut(s) 144
EcoRII CCWGG 1 cut(s) 636
FaeI CATG 2 cut(s) 38, 617
FaqI GGGAC 1 cut(s) 350
FatI CATG 2 cut(s) 34, 613
FblI GTMKAC 1 cut(s) 118
Fnu4HI GCNGC 3 cut(s) 260, 348, 459
FokI GGATG 3 cut(s) 211, 294, 451
Fsp4HI GCNGC 3 cut(s) 260, 348, 459
FspBI CTAG 1 cut(s) 192
GluI GCNGC 3 cut(s) 260, 348, 459
GsuI CTGGAG 1 cut(s) 659
HaeIII GGCC 2 cut(s) 314, 409
HapII CCGG 4 cut(s) 296, 311, 334, 418
HgaI GACGC 1 cut(s) 532
Hin1I GRCGYC 1 cut(s) 524
Hin1II CATG 2 cut(s) 38, 617
HindIII AAGCTT 1 cut(s) 83
HinfI GANTC 3 cut(s) 18, 163, 506
HpaII CCGG 4 cut(s) 296, 311, 334, 418
Hpy166II GTNNAC 1 cut(s) 119
Hpy188I TCNGA 1 cut(s) 202
Hpy188III TCNNGA 3 cut(s) 109, 155, 563
Hpy8I GTNNAC 1 cut(s) 119
Hpy99I CGWCG 1 cut(s) 126
HpyAV CCTTC 1 cut(s) 59
HpyCH4III ACNGT 1 cut(s) 134
HpyCH4IV ACGT 1 cut(s) 121
HpyCH4V TGCA 4 cut(s) 270, 458, 496, 624
HpyF10VI GCNNNNNNNGC 4 cut(s) 467, 601, 654, 663
HpySE526I ACGT 1 cut(s) 121
Hsp92I GRCGYC 1 cut(s) 524
Hsp92II CATG 2 cut(s) 38, 617
Kzo9I GATC 2 cut(s) 264, 642
LguI GCTCTTC 1 cut(s) 110
Lsp1109I GCAGC 2 cut(s) 271, 470
LweI GCATC 3 cut(s) 220, 233, 666
MaeI CTAG 1 cut(s) 192
MaeII ACGT 1 cut(s) 121
MaeIII GTNAC 3 cut(s) 128, 134, 486
MalI GATC 2 cut(s) 266, 644
MboI GATC 2 cut(s) 264, 642
MboII GAAGA 3 cut(s) 86, 97, 311
MflI RGATCY 1 cut(s) 264
MhlI GDGCHC 1 cut(s) 659
MluCI AATT 3 cut(s) 144, 168, 446
MmeI TCCRAC 1 cut(s) 418
MnlI CCTC 9 cut(s) 7, 70, 241, 337, 367, 469, 477, 538, 541
MseI TTAA 2 cut(s) 500, 694
MslI CAYNNNNRTG 1 cut(s) 612
MspI CCGG 4 cut(s) 296, 311, 334, 418
MspR9I CCNGG 3 cut(s) 335, 418, 638
MvaI CCWGG 1 cut(s) 638
MvnI CGCG 1 cut(s) 674
MwoI GCNNNNNNNGC 4 cut(s) 467, 601, 654, 663
NciI CCSGG 2 cut(s) 335, 418
NdeII GATC 2 cut(s) 264, 642
NlaIII CATG 2 cut(s) 38, 617
NlaIV GGNNCC 1 cut(s) 442
NmuCI GTSAC 3 cut(s) 128, 134, 486
PciSI GCTCTTC 1 cut(s) 110
PfeI GAWTC 3 cut(s) 18, 163, 506
PkrI GCNGC 3 cut(s) 261, 349, 460
Psp6I CCWGG 1 cut(s) 636
PspGI CCWGG 1 cut(s) 636
PspN4I GGNNCC 1 cut(s) 442
PspPI GGNCC 2 cut(s) 407, 440
PstI CTGCAG 2 cut(s) 272, 460
PstNI CAGNNNCTG 1 cut(s) 637
PsuI RGATCY 1 cut(s) 264
RsaI GTAC 1 cut(s) 618
RsaNI GTAC 1 cut(s) 617
RseI CAYNNNNRTG 1 cut(s) 612
SapI GCTCTTC 1 cut(s) 110
SaqAI TTAA 2 cut(s) 500, 694
SatI GCNGC 3 cut(s) 260, 348, 459
Sau3AI GATC 2 cut(s) 264, 642
Sau96I GGNCC 2 cut(s) 407, 440
ScrFI CCNGG 3 cut(s) 335, 418, 638
SduI GDGCHC 1 cut(s) 659
SfaNI GCATC 3 cut(s) 220, 233, 666
SfcI CTRYAG 2 cut(s) 268, 456
SinI GGWCC 1 cut(s) 440
SmiMI CAYNNNNRTG 1 cut(s) 612
SmlI CTYRAG 1 cut(s) 360
SmoI CTYRAG 1 cut(s) 360
Sse9I AATT 3 cut(s) 144, 168, 446
SsiI CCGC 3 cut(s) 347, 350, 468
SspMI CTAG 1 cut(s) 192
StyD4I CCNGG 3 cut(s) 333, 416, 636
TaaI ACNGT 1 cut(s) 134
TaiI ACGT 1 cut(s) 124
TaqI TCGA 4 cut(s) 142, 154, 474, 517
TaqII GACCGA 1 cut(s) 75
TasI AATT 3 cut(s) 144, 168, 446
TatI WGTACW 1 cut(s) 616
TauI GCSGC 1 cut(s) 350
TfiI GAWTC 3 cut(s) 18, 163, 506
Tru1I TTAA 2 cut(s) 500, 694
Tru9I TTAA 2 cut(s) 500, 694
TscAI CASTG 1 cut(s) 638
TseFI GTSAC 3 cut(s) 128, 134, 486
TseI GCWGC 2 cut(s) 259, 458
Tsp45I GTSAC 3 cut(s) 128, 134, 486
TspDTI ATGAA 4 cut(s) 20, 137, 189, 602
TspGWI ACGGA 2 cut(s) 260, 280
TspRI CASTG 1 cut(s) 638
VpaK11BI GGWCC 1 cut(s) 440
XapI RAATTY 2 cut(s) 144, 446
XcmI CCANNNNNNNNNTGG 1 cut(s) 401
XmiI GTMKAC 1 cut(s) 118
XspI CTAG 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.