Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000048

Physical Location & Seq

Genomic Coordinates Reverse (-)

8185398 .. 8188156

Gene Structure 2759 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g13620.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGGATAGCTTGTGTGCAAGCCTATTCAAGCCTACCAGCTACGGCTTCCTCATCAAAATTATTGCTCACTACTTGCTCTTTCTTTTTCTGGCATCTTCACATCTGCACGGTACTACTCAACTGTGTTTGGGTGATGGACTTCCGAGTGCATCATGCATCGAGGAAGAGAGACGAGCTCTTCTCAGCTTCAAAGCAGATGTTAATGATAGTTCCGGCAGGCTTTTATCTTGGGTGGGTCTAGATTGCTGTCGATGGAAAGGGATTTCATGCAACAACCGTACAGGCCACGTTGCAAAGATGGACCTCCGGAACCCGAATTATGATCCACTCAACGGGAATACTTCTTTGGGGGGTAACATCAATCCTTCTTTGCTTAGCTTAAAGAAGTTGTATAGCCTTGACCTAAGCGGAAATGATTTTGGAGGACTCCGAATTCCTGATTTCTTTGGGAAGCTTACAAGTTTGAGGTATCTTAATCTCTCCTCTGCTTCATTTAAGGGAGAGATTCCCCCAGCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAATACTAATTACTACTATGAAGGTTATTCTTCCAATAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAGTACCTCAATCTTAGATATGTGAACCTCAGCAGCACAGGAGTAAGTTGGCTACATGATGTCAACATGCTTCCTTCACTCTTAGAATTGCATCTGACTAGTTGCCAAATTCAAAAGCTTCCACACTCCCAGCAGCTGCAATCAGTAAACTTCACATCCCTATTGGTTCTTGATATATCATTCAATGATATTAATTCTTCATTTCCCAGCTGGTTTTTAAATCTTACCAACCTCAAAAAACTTGATGCATCTGGCAATTTGTTCGGTCCCATCCCTGTTGAACTTGCAAACCTCAAGTCTTTGGAAGACTTTAATTTATGGGGCAATTCTGCCCAAGGTCAAATTCCCAAAGTCTTTGGTAGATTGTGCAGCCTAAGGATATTAGATCTTTCTGAAAACTCGTTCAGTGGTGGTTTGGAAGAGGTTTTGAATGGCTTCTCAAACTGCACAAGTCACAGACTAGAGTCGCTTGATTTGTCCATCAATCAGATAGAAGGTGAACTGCCTGCCGCCTTAGGAGTGCTAGAAAATCTGAAGGAACTTGACCTTAGTGTAAACAAATTTTATGGTTCAATTCCAGAATTTATTGGTAATTTATCATCCTTGGAAAAACTGGCCATCTCTTGGAATGATATGAATGGGTCCATTCCTGCAAGTTTGGGACAACTCTCTCAGCTAGTTCACCTAGATCTATCTTCGAATGATATCAATGGGTCCATTCCTGCAAGTTTGGGACAACTCTCTCAGCTAGTTCACCTAGATCTATCTTCGAATCATATGAATGGGTCCATTCCTGCAAGTTTGGGACAACTCTCTCAGCTAGTTCACCTAGATCTATCTTTGAATTCGTGGGAAGGCATTTTAACAGAAGTCCATTTCCGAACTCTCACCAAGTTAGAGACTTTTGGTATAAGCACACAGCAACCTTTCTCCCTCAGTTTGAATGTGGCTCATGACTGGGTTCCTCCTTTCCAGCTTGATTCACTCGACATTGTTAACTGCAGAGTAGGTCCTGCCTTTGGGATGTGGCTTCGATCTCAAACTGAATTAACGCATCTCAGGCTCAGAAATACTGGAATATCAGACTCCATACCAGAGGAATGGTTCTTGACGATATCTTCCAAACTCACATGTGTGGATTTGTCCAACAACCAAATCCGTGGAAAGCTTCCATTTCACATGAACTCCCCATCTTTGTATTATATAGATCTGAATCATAATGAATTTGAGGGCCCTCTGCCACAATGGTCTAGTCCTGCCTCCTATCTCGATCTTCGAAGCAACTCTTTTTCCGGGCCAATTCCCTCAAACTATGATCAACTGTTGCCTAATTTGGAAGAATTGTCTCTTTCTGACAATAACCTGAGTGGTAGTATACCACCCTCTTTATGCAACATGTCAAGTTTGAGATTCCTTATTTTAAGAAGCAATCACTTGTCTGGAGACTTCTCTCGAGCATGGAGTACGTGGCCATATATACAAGCTGTAGATGTCTCATACAACGATTTGACCGGCAATATCACCAGTTCAATGGGTGTCCCGAGCTCACTATGGGTATTGAATCTGAGCAACAACAATTTCACGGGTCAAATTCCTTCTTCCTTATTCCAAAATTGCACAGAGTTGAAATCATCTAACCGGAAACATTCCCTTAAAGATTGGAAACTTGCGATGGCTAGAAACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

770

Amino Acids

85.13

Weight (kDa)

5.6

Isoelectric Point (pI)

37.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	54 - 91	4.1e-12	Leucine rich repeat N-terminal domain
LRR_14	PF23598	259 - 367	1.1e-06	Leucine-rich repeat region
LRR_14	PF23598	378 - 562	1.4e-17	Leucine-rich repeat region
LRR_8	PF13855	384 - 443	1.1e-06	Leucine rich repeat
LRR_8	PF13855	427 - 466	5.7e-06	Leucine rich repeat
LRR_8	PF13855	629 - 686	1.7e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34930
fragaria_vesca	FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica	MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica	Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis	pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis	RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata	RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora	Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii	Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa	Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha	Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana	Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	518, 1245
AccI	GTMKAC	1 cut(s)	1996
AccIII	TCCGGA	1 cut(s)	306
AciI	CCGC	2 cut(s)	408, 1131
AclWI	GGATC	1 cut(s)	317
AcoI	YGGCCR	2 cut(s)	1236, 2090
AcsI	RAATTY	8 cut(s)	432, 729, 963, 1181, 1202, 1465, 1844, 2211
AcuI	CTGAAG	1 cut(s)	1175
AfaI	GTAC	4 cut(s)	112, 280, 626, 2086
AfiI	CCNNNNNNNGG	4 cut(s)	332, 518, 1245, 1640
AflIII	ACRYGT	2 cut(s)	1751, 2016
AhlI	ACTAGT	1 cut(s)	719
AjuI	GAANNNNNNNTTGG	4 cut(s)	329, 361, 948, 980
AleI	CACNNNNGTG	1 cut(s)	1754
Alw21I	GWGCWC	2 cut(s)	178, 2168
Alw26I	GTCTC	5 cut(s)	163, 1514, 1971, 2058, 2119
AlwI	GGATC	1 cut(s)	317
AlwNI	CAGNNNCTG	1 cut(s)	757
Ama87I	CYCGRG	2 cut(s)	2073, 2161
Aor13HI	TCCGGA	1 cut(s)	306
AoxI	GGCC	5 cut(s)	283, 1236, 1852, 1916, 2090
ApaI	GGGCCC	1 cut(s)	1856
ApeKI	GCWGC	4 cut(s)	654, 754, 757, 990
ApoI	RAATTY	8 cut(s)	432, 729, 963, 1181, 1202, 1465, 1844, 2211
ArsI	GACNNNNNNTTYG	2 cut(s)	902, 934
AseI	ATTAAT	1 cut(s)	813
Asp700I	GAANNNNTTC	1 cut(s)	1055
AspS9I	GGNCC	9 cut(s)	301, 887, 1263, 1335, 1407, 1631, 1852, 1853, 1916
AsuC2I	CCSGG	1 cut(s)	1915
AsuHPI	GGTGA	7 cut(s)	143, 1130, 1295, 1367, 1439, 1501, 2134
AsuII	TTCGAA	3 cut(s)	1319, 1391, 1897
AvaI	CYCGRG	2 cut(s)	2073, 2161
AvaII	GGWCC	6 cut(s)	301, 887, 1263, 1335, 1407, 1631
AxyI	CCTNAGG	2 cut(s)	995, 1135
BaeGI	GKGCMC	1 cut(s)	1856
BalI	TGGCCA	2 cut(s)	1238, 2092
BanII	GRGCYC	3 cut(s)	178, 1856, 2168
BbsI	GAAGAC	1 cut(s)	933
Bbv12I	GWGCWC	2 cut(s)	178, 2168
BbvCI	CCTCAGC	1 cut(s)	650
BbvI	GCAGC	4 cut(s)	666, 744, 766, 1002
BccI	CCATC	8 cut(s)	128, 246, 292, 899, 1109, 1247, 1819, 2287
BceAI	ACGGC	1 cut(s)	58
BcgI	CGANNNNNNTGC	2 cut(s)	865, 899
BclI	TGATCA	1 cut(s)	1936
BcnI	CCSGG	1 cut(s)	1915
BcoDI	GTCTC	5 cut(s)	163, 1514, 1971, 2058, 2119
BcuI	ACTAGT	1 cut(s)	719
BfmI	CTRYAG	2 cut(s)	1621, 2106
BglII	AGATCT	5 cut(s)	1006, 1309, 1381, 1453, 1828
BisI	GCNGC	5 cut(s)	655, 755, 758, 991, 1131
BlpI	GCTNAGC	1 cut(s)	374
BlsI	GCNGC	5 cut(s)	656, 756, 759, 992, 1132
Bme1390I	CCNGG	1 cut(s)	1915
Bme18I	GGWCC	6 cut(s)	301, 887, 1263, 1335, 1407, 1631
BmeT110I	CYCGRG	2 cut(s)	2073, 2161
BmgT120I	GGNCC	9 cut(s)	301, 887, 1263, 1335, 1407, 1631, 1852, 1853, 1916
BmiI	GGNNCC	7 cut(s)	311, 889, 1264, 1336, 1408, 1584, 1854
BmrFI	CCNGG	1 cut(s)	1915
BmrI	ACTGGG	1 cut(s)	1588
BmsI	GCATC	7 cut(s)	101, 158, 165, 721, 856, 878, 1684
BmuI	ACTGGG	1 cut(s)	1588
BoxI	GACNNNNGTC	1 cut(s)	1084
BpiI	GAAGAC	1 cut(s)	933
BplI	GAGNNNNNCTC	4 cut(s)	160, 192, 165, 197
BpmI	CTGGAG	1 cut(s)	2082
Bpu10I	CCTNAGC	2 cut(s)	404, 650
Bpu1102I	GCTNAGC	1 cut(s)	374
Bpu14I	TTCGAA	3 cut(s)	1319, 1391, 1897
BpuEI	CTTGAG	1 cut(s)	899
BpuMI	CCSGG	1 cut(s)	1915
BsaAI	YACGTR	1 cut(s)	2088
BsaBI	GATNNNNATC	1 cut(s)	1833
BsaJI	CCNNGG	3 cut(s)	955, 1224, 1780
BsaWI	WCCGGW	2 cut(s)	306, 2259
BsaXI	ACNNNNNCTCC	2 cut(s)	1790, 1820
Bsc4I	CCNNNNNNNGG	4 cut(s)	332, 518, 1245, 1640
Bse118I	RCCGGY	1 cut(s)	2132
Bse1I	ACTGG	4 cut(s)	1239, 1583, 1699, 2145
Bse21I	CCTNAGG	2 cut(s)	995, 1135
Bse8I	GATNNNNATC	1 cut(s)	1833
BseAI	TCCGGA	1 cut(s)	306
BseDI	CCNNGG	3 cut(s)	955, 1224, 1780
BseGI	GGATG	4 cut(s)	776, 891, 1220, 1650
BseJI	GATNNNNATC	1 cut(s)	1833
BseLI	CCNNNNNNNGG	4 cut(s)	332, 518, 1245, 1640
BseNI	ACTGG	4 cut(s)	1239, 1583, 1699, 2145
BseRI	GAGGAG	1 cut(s)	472
BseSI	GKGCMC	1 cut(s)	1856
BseXI	GCAGC	4 cut(s)	666, 744, 766, 1002
BseYI	CCCAGC	3 cut(s)	511, 750, 827
BsgI	GTGCAG	3 cut(s)	89, 1009, 1051
BshFI	GGCC	5 cut(s)	285, 1238, 1854, 1918, 2092
BsiHKAI	GWGCWC	2 cut(s)	178, 2168
BsiHKCI	CYCGRG	2 cut(s)	2073, 2161
BsiSI	CCGG	5 cut(s)	213, 307, 1914, 2133, 2260
BslFI	GGGAC	5 cut(s)	873, 1296, 1368, 1440, 2144
BslI	CCNNNNNNNGG	4 cut(s)	332, 518, 1245, 1640
BsmAI	GTCTC	5 cut(s)	163, 1514, 1971, 2058, 2119
BsmBI	CGTCTC	1 cut(s)	163
BsmFI	GGGAC	5 cut(s)	873, 1296, 1368, 1440, 2144
BsnI	GGCC	5 cut(s)	285, 1238, 1854, 1918, 2092
BsoBI	CYCGRG	2 cut(s)	2073, 2161
Bsp119I	TTCGAA	3 cut(s)	1319, 1391, 1897
Bsp120I	GGGCCC	1 cut(s)	1852
Bsp1286I	GDGCHC	3 cut(s)	178, 1856, 2168
Bsp13I	TCCGGA	1 cut(s)	306
Bsp143I	GATC	9 cut(s)	322, 1006, 1309, 1381, 1453, 1655, 1828, 1891, 1936
Bsp1720I	GCTNAGC	1 cut(s)	374
BspACI	CCGC	2 cut(s)	408, 1131
BspANI	GGCC	5 cut(s)	285, 1238, 1854, 1918, 2092
BspEI	TCCGGA	1 cut(s)	306
BspHI	TCATGA	1 cut(s)	1573
BspLI	GGNNCC	7 cut(s)	311, 889, 1264, 1336, 1408, 1584, 1854
BspMAI	CTGCAG	1 cut(s)	1625
BspPI	GGATC	1 cut(s)	317
BspQI	GCTCTTC	1 cut(s)	183
BspT104I	TTCGAA	3 cut(s)	1319, 1391, 1897
BsrFI	RCCGGY	1 cut(s)	2132
BsrI	ACTGG	4 cut(s)	1239, 1583, 1699, 2145
BssAI	RCCGGY	1 cut(s)	2132
BssECI	CCNNGG	3 cut(s)	955, 1224, 1780
BssMI	GATC	9 cut(s)	322, 1006, 1309, 1381, 1453, 1655, 1828, 1891, 1936
BssNAI	GTATAC	1 cut(s)	1997
BssT1I	CCWWGG	2 cut(s)	955, 1224
Bst1107I	GTATAC	1 cut(s)	1997
Bst4CI	ACNGT	4 cut(s)	110, 123, 278, 1944
Bst6I	CTCTTC	4 cut(s)	159, 183, 619, 1035
BstBAI	YACGTR	1 cut(s)	2088
BstBI	TTCGAA	3 cut(s)	1319, 1391, 1897
BstC8I	GCNNGC	3 cut(s)	19, 218, 1128
BstDSI	CCRYGG	1 cut(s)	1780
BstEII	GGTNACC	1 cut(s)	521
BstF5I	GGATG	4 cut(s)	776, 891, 1220, 1650
BstKTI	GATC	9 cut(s)	325, 1009, 1312, 1384, 1456, 1658, 1831, 1894, 1939
BstMAI	GTCTC	5 cut(s)	163, 1514, 1971, 2058, 2119
BstMBI	GATC	9 cut(s)	322, 1006, 1309, 1381, 1453, 1655, 1828, 1891, 1936
BstMWI	GCNNNNNNNGC	1 cut(s)	1681
BstNSI	RCATGY	3 cut(s)	691, 1755, 2020
BstPAI	GACNNNNGTC	1 cut(s)	1084
BstPI	GGTNACC	1 cut(s)	521
BstSCI	CCNGG	1 cut(s)	1913
BstSFI	CTRYAG	2 cut(s)	1621, 2106
BstSLI	GKGCMC	1 cut(s)	1856
BstV1I	GCAGC	4 cut(s)	666, 744, 766, 1002
BstV2I	GAAGAC	1 cut(s)	933
BstX2I	RGATCY	5 cut(s)	1006, 1309, 1381, 1453, 1828
BstXI	CCANNNNNNTGG	3 cut(s)	1722, 1781, 2152
BstYI	RGATCY	5 cut(s)	1006, 1309, 1381, 1453, 1828
BstZ17I	GTATAC	1 cut(s)	1997
Bsu36I	CCTNAGG	2 cut(s)	995, 1135
BsuRI	GGCC	5 cut(s)	285, 1238, 1854, 1918, 2092
BtgI	CCRYGG	1 cut(s)	1780
BtgZI	GCGATG	1 cut(s)	2306
BtsCI	GGATG	4 cut(s)	776, 891, 1220, 1650
BtsIMutI	CAGTG	1 cut(s)	1033
Cac8I	GCNNGC	3 cut(s)	19, 218, 1128
CaiI	CAGNNNCTG	1 cut(s)	757
CciI	TCATGA	1 cut(s)	1573
Cfr10I	RCCGGY	1 cut(s)	2132
Cfr13I	GGNCC	9 cut(s)	301, 887, 1263, 1335, 1407, 1631, 1852, 1853, 1916
Csp6I	GTAC	4 cut(s)	111, 279, 625, 2085
CviAII	CATG	9 cut(s)	153, 267, 677, 688, 1574, 1752, 1801, 2017, 2079
CviQI	GTAC	4 cut(s)	111, 279, 625, 2085
DpnI	GATC	9 cut(s)	324, 1008, 1311, 1383, 1455, 1657, 1830, 1893, 1938
DpnII	GATC	9 cut(s)	322, 1006, 1309, 1381, 1453, 1655, 1828, 1891, 1936
DraI	TTTAAA	1 cut(s)	840
EaeI	YGGCCR	2 cut(s)	1236, 2090
Eam1104I	CTCTTC	4 cut(s)	159, 183, 619, 1035
EarI	CTCTTC	4 cut(s)	159, 183, 619, 1035
Ecl136II	GAGCTC	2 cut(s)	176, 2166
Eco130I	CCWWGG	2 cut(s)	955, 1224
Eco24I	GRGCYC	3 cut(s)	178, 1856, 2168
Eco32I	GATATC	2 cut(s)	1327, 1737
Eco47I	GGWCC	6 cut(s)	301, 887, 1263, 1335, 1407, 1631
Eco53kI	GAGCTC	2 cut(s)	176, 2166
Eco57I	CTGAAG	1 cut(s)	1175
Eco81I	CCTNAGG	2 cut(s)	995, 1135
Eco88I	CYCGRG	2 cut(s)	2073, 2161
Eco91I	GGTNACC	1 cut(s)	521
EcoICRI	GAGCTC	2 cut(s)	176, 2166
EcoO109I	RGGNCCY	3 cut(s)	1631, 1852, 1853
EcoO65I	GGTNACC	1 cut(s)	521
EcoRI	GAATTC	2 cut(s)	432, 1465
EcoRV	GATATC	2 cut(s)	1327, 1737
EcoT14I	CCWWGG	2 cut(s)	955, 1224
EcoT22I	ATGCAT	2 cut(s)	158, 871
EcoT38I	GRGCYC	3 cut(s)	178, 1856, 2168
ErhI	CCWWGG	2 cut(s)	955, 1224
Esp3I	CGTCTC	1 cut(s)	163
FaeI	CATG	9 cut(s)	156, 270, 680, 691, 1577, 1755, 1804, 2020, 2082
FalI	AAGNNNNNCTT	2 cut(s)	1891, 1923
FaqI	GGGAC	5 cut(s)	873, 1296, 1368, 1440, 2144
FatI	CATG	9 cut(s)	152, 266, 676, 687, 1573, 1751, 1800, 2016, 2078
FauNDI	CATATG	1 cut(s)	1398
FbaI	TGATCA	1 cut(s)	1936
FblI	GTMKAC	1 cut(s)	1996
Fnu4HI	GCNGC	5 cut(s)	655, 755, 758, 991, 1131
FokI	GGATG	4 cut(s)	763, 878, 1207, 1657
FriOI	GRGCYC	3 cut(s)	178, 1856, 2168
Fsp4HI	GCNGC	5 cut(s)	655, 755, 758, 991, 1131
GluI	GCNGC	5 cut(s)	655, 755, 758, 991, 1131
GsaI	CCCAGC	3 cut(s)	515, 754, 831
GsuI	CTGGAG	1 cut(s)	2082
HaeIII	GGCC	5 cut(s)	285, 1238, 1854, 1918, 2092
HapII	CCGG	5 cut(s)	213, 307, 1914, 2133, 2260
Hin1II	CATG	9 cut(s)	156, 270, 680, 691, 1577, 1755, 1804, 2020, 2082
HincII	GTYRAC	2 cut(s)	685, 1618
HindII	GTYRAC	2 cut(s)	685, 1618
HindIII	AAGCTT	3 cut(s)	452, 737, 1787
HinfI	GANTC	9 cut(s)	426, 505, 1085, 1393, 1601, 1706, 1834, 2031, 2182
HpaI	GTTAAC	1 cut(s)	1618
HpaII	CCGG	5 cut(s)	213, 307, 1914, 2133, 2260
HphI	GGTGA	7 cut(s)	143, 1130, 1295, 1367, 1439, 1501, 2134
HpyAV	CCTTC	7 cut(s)	375, 566, 705, 1109, 1150, 1469, 2226
HpyCH4III	ACNGT	4 cut(s)	110, 123, 278, 1944
HpyCH4IV	ACGT	2 cut(s)	288, 2087
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1681
HpySE526I	ACGT	2 cut(s)	288, 2087
Hsp92II	CATG	9 cut(s)	156, 270, 680, 691, 1577, 1755, 1804, 2020, 2082
Kpn2I	TCCGGA	1 cut(s)	306
Ksp22I	TGATCA	1 cut(s)	1936
KspAI	GTTAAC	1 cut(s)	1618
Kzo9I	GATC	9 cut(s)	322, 1006, 1309, 1381, 1453, 1655, 1828, 1891, 1936
LguI	GCTCTTC	1 cut(s)	183
Lsp1109I	GCAGC	4 cut(s)	666, 744, 766, 1002
LweI	GCATC	7 cut(s)	101, 158, 165, 721, 856, 878, 1684
MaeII	ACGT	2 cut(s)	288, 2087
MaeIII	GTNAC	3 cut(s)	353, 521, 1073
MalI	GATC	9 cut(s)	324, 1008, 1311, 1383, 1455, 1657, 1830, 1893, 1938
MboI	GATC	9 cut(s)	322, 1006, 1309, 1381, 1453, 1655, 1828, 1891, 1936
MflI	RGATCY	5 cut(s)	1006, 1309, 1381, 1453, 1828
MhlI	GDGCHC	3 cut(s)	178, 1856, 2168
MlsI	TGGCCA	2 cut(s)	1238, 2092
MluNI	TGGCCA	2 cut(s)	1238, 2092
MlyI	GAGTC	3 cut(s)	420, 1094, 1700
MmeI	TCCRAC	1 cut(s)	1791
Mox20I	TGGCCA	2 cut(s)	1238, 2092
Mph1103I	ATGCAT	2 cut(s)	158, 871
MroI	TCCGGA	1 cut(s)	306
MroXI	GAANNNNTTC	1 cut(s)	1055
MscI	TGGCCA	2 cut(s)	1238, 2092
MslI	CAYNNNNRTG	2 cut(s)	1401, 1754
Msp20I	TGGCCA	2 cut(s)	1238, 2092
MspA1I	CMGCKG	2 cut(s)	757, 831
MspI	CCGG	5 cut(s)	213, 307, 1914, 2133, 2260
MspR9I	CCNGG	1 cut(s)	1915
MwoI	GCNNNNNNNGC	1 cut(s)	1681
NciI	CCSGG	1 cut(s)	1915
NdeI	CATATG	1 cut(s)	1398
NdeII	GATC	9 cut(s)	322, 1006, 1309, 1381, 1453, 1655, 1828, 1891, 1936
NlaIII	CATG	9 cut(s)	156, 270, 680, 691, 1577, 1755, 1804, 2020, 2082
NlaIV	GGNNCC	7 cut(s)	311, 889, 1264, 1336, 1408, 1584, 1854
NmuCI	GTSAC	1 cut(s)	1073
NsiI	ATGCAT	2 cut(s)	158, 871
NspI	RCATGY	3 cut(s)	691, 1755, 2020
NspV	TTCGAA	3 cut(s)	1319, 1391, 1897
OliI	CACNNNNGTG	1 cut(s)	1754
PaeR7I	CTCGAG	1 cut(s)	2073
PagI	TCATGA	1 cut(s)	1573
PciI	ACATGT	2 cut(s)	1751, 2016
PciSI	GCTCTTC	1 cut(s)	183
PdmI	GAANNNNTTC	1 cut(s)	1055
PfeI	GAWTC	6 cut(s)	505, 1393, 1601, 1834, 2031, 2182
PflMI	CCANNNNNTGG	2 cut(s)	518, 1245
PkrI	GCNGC	5 cut(s)	656, 756, 759, 992, 1132
PleI	GAGTC	3 cut(s)	420, 1093, 1700
PpsI	GAGTC	3 cut(s)	420, 1093, 1700
Ppu21I	YACGTR	1 cut(s)	2088
PpuMI	RGGWCCY	1 cut(s)	1631
PscI	ACATGT	2 cut(s)	1751, 2016
PshAI	GACNNNNGTC	1 cut(s)	1084
PshBI	ATTAAT	1 cut(s)	813
Psp124BI	GAGCTC	2 cut(s)	178, 2168
Psp5II	RGGWCCY	1 cut(s)	1631
PspEI	GGTNACC	1 cut(s)	521
PspFI	CCCAGC	3 cut(s)	511, 750, 827
PspN4I	GGNNCC	7 cut(s)	311, 889, 1264, 1336, 1408, 1584, 1854
PspOMI	GGGCCC	1 cut(s)	1852
PspPI	GGNCC	9 cut(s)	301, 887, 1263, 1335, 1407, 1631, 1852, 1853, 1916
PspPPI	RGGWCCY	1 cut(s)	1631
PstI	CTGCAG	1 cut(s)	1625
PstNI	CAGNNNCTG	1 cut(s)	757
PsuI	RGATCY	5 cut(s)	1006, 1309, 1381, 1453, 1828
PvuII	CAGCTG	2 cut(s)	757, 831
RsaI	GTAC	4 cut(s)	112, 280, 626, 2086
RsaNI	GTAC	4 cut(s)	111, 279, 625, 2085
RseI	CAYNNNNRTG	2 cut(s)	1401, 1754
SacI	GAGCTC	2 cut(s)	178, 2168
SapI	GCTCTTC	1 cut(s)	183
SatI	GCNGC	5 cut(s)	655, 755, 758, 991, 1131
Sau3AI	GATC	9 cut(s)	322, 1006, 1309, 1381, 1453, 1655, 1828, 1891, 1936
Sau96I	GGNCC	9 cut(s)	301, 887, 1263, 1335, 1407, 1631, 1852, 1853, 1916
SchI	GAGTC	3 cut(s)	420, 1094, 1700
ScrFI	CCNGG	1 cut(s)	1915
SduI	GDGCHC	3 cut(s)	178, 1856, 2168
SfaNI	GCATC	7 cut(s)	101, 158, 165, 721, 856, 878, 1684
SfcI	CTRYAG	2 cut(s)	1621, 2106
Sfr274I	CTCGAG	1 cut(s)	2073
SfuI	TTCGAA	3 cut(s)	1319, 1391, 1897
SinI	GGWCC	6 cut(s)	301, 887, 1263, 1335, 1407, 1631
SlaI	CTCGAG	1 cut(s)	2073
SmiMI	CAYNNNNRTG	2 cut(s)	1401, 1754
SmlI	CTYRAG	2 cut(s)	914, 2073
SmoI	CTYRAG	2 cut(s)	914, 2073
SpeI	ACTAGT	1 cut(s)	719
SsiI	CCGC	2 cut(s)	408, 1131
SstI	GAGCTC	2 cut(s)	178, 2168
StyD4I	CCNGG	1 cut(s)	1913
StyI	CCWWGG	2 cut(s)	955, 1224
TaaI	ACNGT	4 cut(s)	110, 123, 278, 1944
TaiI	ACGT	2 cut(s)	291, 2090
TaqI	TCGA	9 cut(s)	159, 250, 1319, 1391, 1608, 1654, 1890, 1897, 2074
TaqII	GACCGA	1 cut(s)	875
TauI	GCSGC	1 cut(s)	1133
TfiI	GAWTC	6 cut(s)	505, 1393, 1601, 1834, 2031, 2182
TscAI	CASTG	1 cut(s)	1033
TseFI	GTSAC	1 cut(s)	1073
TseI	GCWGC	4 cut(s)	654, 754, 757, 990
Tsp45I	GTSAC	1 cut(s)	1073
TspDTI	ATGAA	8 cut(s)	255, 480, 585, 810, 1271, 1415, 1817, 1857
TspGWI	ACGGA	1 cut(s)	1769
TspRI	CASTG	1 cut(s)	1033
Van91I	CCANNNNNTGG	2 cut(s)	518, 1245
VpaK11BI	GGWCC	6 cut(s)	301, 887, 1263, 1335, 1407, 1631
VspI	ATTAAT	1 cut(s)	813
XapI	RAATTY	8 cut(s)	432, 729, 963, 1181, 1202, 1465, 1844, 2211
XbaI	TCTAGA	1 cut(s)	238
XceI	RCATGY	3 cut(s)	691, 1755, 2020
XhoI	CTCGAG	1 cut(s)	2073
XmiI	GTMKAC	1 cut(s)	1996
XmnI	GAANNNNTTC	1 cut(s)	1055
Zsp2I	ATGCAT	2 cut(s)	158, 871

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.