RchiOBHm_Chr5g0022741

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
16842096 .. 16845374
3279 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30266

Sequence Viewer

Length: 2997 bp
ATGGATAGCTTCTGTGCAAACCTATTCAAGCCTACCAGCTATCGCTTCCTCGTCAAAAATGTTGCTCACTACTTGCTCTTTGTTATTCTGGCATCTTCATATCTGCACACTACTAAACTGTGTGTGGGAGATGGACTTCCGAGTGGTGTGAGATCATCATCATGCATCGAGGAAGAGAGACGAGCGCTTCTCAGCTTCAAAGGAGATGTTACTGATCGTTCCGGCAGGCTTTCTTCTTGGGTGGGTCAGGATTGCTGCCGCTGGAAAGGGATTTCGTGCAACAACCGTACAGGTCATGTTGCAAGGATGGACCTCCGAAACCCGAAGTATGATCACGGCTTCTACGGGGAGACTTCTTTGGGGGGTAAGATTAATCCTTCTTTGCTTATCTTGAAGAACTTACGTTACCTTGATCTAAGTGGAAACTATTTTTATGGACGTCAAATTCCTAACTTCTTTGGGAAGCTTCAAAGTTTGAGGTATCTCAATCTCTCATACAATTCATTTGTGGGAGAGATTCCCCCATCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAGTACTAATAATGTTGATGATCTTTCTTCCAAAAATTTGAATTGGCTTTCTCACCTCTCTTCCCTAAAGTATCTCAATCTTGGAGGTGTGAACCTTAGCAGCACAGGAGTGAGTTGGCTACATGATGTCACCATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTGATTGCCAAATTCAAAACCTTCCACACTCCCAGCTGCCGTCGGTGAACTTCACATCCCGCCTATCGGTTCTTGATATATCAGATAATCATATTAATTCTTCATTTCCCAGCTGGTTTTTTAATCTTACCAACCTCAAAAGACTTGATGCATCTTCCAATTTGTTCGGGCCCTTCCCTGTTGAATTTGCAAACCTCAAGTCTTTGGAAGACCTTGATTTGAGTGGAAATTTTCTCGGGGATAATAGATCTTTCGGTCAAATTCCCAAAGTCATTGGTACTTTGTGCAGCCTAAGGATATTAGATCTTAGGGGGAACTCATTCAATGGTAGTTTGGAAAATTTTTTGAATGGTTTCTCAAATGGTACAAGTTATAGATTAGGACTGCTGGAAAATCTGAAGGAACTTGACCTCAGTTTGAACCATTTTTTTGGTTCAATTCCACAATCTATTAGTAATTTATCATCCCTGGAAAAACTGGACATCTCGGATAATAATTTCAATGGGTCCATTCCTGAAAGTTTGGGACAACTCTCTCAGCTAGTTCACCTCGATCTATCTGAGAATTCGTTGGAAGGCAATCTAAATGAAGCCCATTTCCGAACTCTCACAAAGTTGGAGTCTTTTGCAGTCTGTAGCAAATACGGGTTCATGACTGGGTCCCTCATTTTTAACATGGCTCATGACTGGGTTCCTCCTTTCCAACTTAATTCAATCGACATTGCCGACTGCAGAGTAGGTCCTGCCTTTGGGGTATGGCTTCAGTCTCAAACTGAATTAACGGAAGTCACGCTTCGTAATACTTCAATCTCAGATTTCATACCAGAGGAATGGTTCTTGAAGATATCTTTCCAACTCACATGGCTGGATTTATCTAACAACCAAATTCGTGGAAAGCTTCCATTTCACATGACCTCCCCGTCCTTGGAGAATATAGATTTGAGTCGTAATCAATTTGAGGGCCCTCTTCCACATTGGTCTAGCGATGCTGCCAAATATCTCGATCTTCAAAGCAATTTATTTTCCGGGCCGATTCCCTCAAATTCTGATCAATTGTTGCCTAAATTGTGGGAATTGTATCTATCTGACAATCATCTGAATGGTAGTCTACCACCCTCTTTGTGCAACATGTCAAGTTTAAATACCCTTATGTTAAGAAGCAATCACTTGTCTGGAGAATTCCCACGAGCCTGGAGTCTGTGGCCATATTTACAAATTGTAGATGTCTCAGACAACAATTTGTCTGGCAATTTCTCCAGTTCAATGGGTGTTCCAAGCTTACTAATGGTATTGGATCTGAGCAAAAACAATTTCGGGGGTCAAATTCCTTCTTCTCTATTCCAAAACTGCAGCGAGTTGTGGAGTATTGATCTTGGAGGCAATAGATTTACTGGAAGCATACCTTTACAGACAGGATCAAATGTATCATCTGAATTGCATAGGCTAAGATTACGATCCAACTCTTTAAGCGGACATATCCCCAATCGATTGTGCTCTCTTCAATATCTTCATATCATAGACCTTGGCCACAACAACTTTTCAGGGACCATTCCCAAGTGTTTGTATAATCTGACTGCTTTGGCCTACCGTAATTACAGTAGGTACGGTTTTGAAAATTATCTTGAGACGGCCAGCTTGACATTGAAGGGACAAGAACTCGCATATAACACCACTCTGGATTTGGTGAAAAGCATTGATTTCTCATCAAACAACTTAGAAGGTGAAATCCCTGACGAAGTAAGCAGCCTCATTGGATTGGGCACGTTGAACTTGTCAAGAAATCAACTGACTGGAAACATTCCCTCAAAGATTGGAAACATGCAATTGCTGGAAACTCTTGATCTCTCACACAATCACCTCTCCGGGCATATTCCTCAGAGTTTATCTTCATTAACCCTTTTGGCTCACCTGAACTTGTCTTTCAACAACTTGTCCGGAAGAATTCCTTCAGGCAACCAACTTCAAACACTCAATGATTCATCCATTTACGAAGGCAATCCATCCTTGTGTGGGGTCCCTCTTTCAACTGTCTGCCCGGGAGATGGCCCTGACGATGGTGATCATAATGATGATGATAATGATGAGAATGGGAAGTTTGGTATCGTTGTTAGCGCTGTCCTCGGCTTCATCATAGGCTTCTGGAGTGTCTGTGGCACATTGGTTATGAAGAAATCATGGAGGTATGCCTATTTTCGATTCTTTGATGACATAAAGGAGAAGGCAGCATTAGCAATTGCATTGAGAGTGGCTCGTTGGCAAAGGAGGACTTGA

Protein Analysis

998

Amino Acids

111.01

Weight (kDa)

5.81

Isoelectric Point (pI)

35.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 57 - 94 1.3e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 124 - 208 1.1e-08 Leucine-rich repeat region
LRR_14 PF23598 202 - 356 1.7e-09 Leucine-rich repeat region
LRR_8 PF13855 263 - 319 1.3e-10 Leucine rich repeat
LRR_14 PF23598 326 - 504 9.5e-10 Leucine-rich repeat region
LRR_8 PF13855 374 - 433 7e-08 Leucine rich repeat
LRR_14 PF23598 818 - 904 1.4e-06 Leucine-rich repeat region
LRR_8 PF13855 828 - 886 2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1645
AatII GACGTC 1 cut(s) 442
AccB7I CCANNNNNTGG 1 cut(s) 530
AccI GTMKAC 1 cut(s) 1834
AccIII TCCGGA 1 cut(s) 2660
AciI CCGC 3 cut(s) 259, 787, 2196
AclWI GGATC 3 cut(s) 2028, 2149, 2175
AcoI YGGCCR 3 cut(s) 1928, 2251, 2355
AcuI CTGAAG 3 cut(s) 1145, 1472, 2658
AcyI GRCGYC 1 cut(s) 439
AfaI GTAC 5 cut(s) 289, 568, 1006, 1093, 2330
AfeI AGCGCT 2 cut(s) 186, 2839
AfiI CCNNNNNNNGG 7 cut(s) 530, 793, 1475, 1651, 2736, 2768, 2780
AflIII ACRYGT 1 cut(s) 1854
AjnI CCWGG 2 cut(s) 1194, 1916
AleI CACNNNNGTG 1 cut(s) 671
AloI GAACNNNNNNTCC 2 cut(s) 767, 799
Alw21I GWGCWC 1 cut(s) 2222
Alw26I GTCTC 5 cut(s) 172, 344, 1497, 1957, 2345
AlwI GGATC 3 cut(s) 2028, 2149, 2175
Ama87I CYCGRG 2 cut(s) 962, 2761
Aor13HI TCCGGA 1 cut(s) 2660
Aor51HI AGCGCT 2 cut(s) 186, 2839
AoxI GGCC 8 cut(s) 896, 1687, 1754, 1928, 2251, 2307, 2355, 2770
ApaI GGGCCC 2 cut(s) 900, 1691
ApeKI GCWGC 8 cut(s) 255, 663, 763, 1014, 1715, 2076, 2469, 2948
ArsI GACNNNNNNTTYG 4 cut(s) 911, 943, 1331, 1363
AseI ATTAAT 2 cut(s) 372, 822
Asp700I GAANNNNTTC 3 cut(s) 1046, 1079, 2671
AspLEI GCGC 2 cut(s) 187, 2840
AsuC2I CCSGG 4 cut(s) 1753, 2590, 2762, 2763
AsuHPI GGTGA 9 cut(s) 608, 685, 784, 1265, 2422, 2459, 2573, 2624, 2795
AvaI CYCGRG 2 cut(s) 962, 2761
AvaII GGWCC 6 cut(s) 310, 1233, 1386, 1466, 2271, 2740
AxyI CCTNAGG 1 cut(s) 1019
BaeGI GKGCMC 3 cut(s) 900, 1691, 2489
BalI TGGCCA 2 cut(s) 1930, 2253
BanII GRGCYC 2 cut(s) 900, 1691
BauI CACGAG 1 cut(s) 1911
BbsI GAAGAC 1 cut(s) 942
Bbv12I GWGCWC 1 cut(s) 2222
BbvI GCAGC 8 cut(s) 242, 675, 750, 1026, 1702, 2088, 2481, 2960
BccI CCATC 6 cut(s) 125, 301, 532, 2734, 2762, 2774
BceAI ACGGC 3 cut(s) 352, 751, 2370
BciT130I CCWGG 2 cut(s) 1196, 1918
BclI TGATCA 3 cut(s) 331, 1774, 2785
BcnI CCSGG 4 cut(s) 1753, 2590, 2762, 2763
BcoDI GTCTC 5 cut(s) 172, 344, 1497, 1957, 2345
BfaI CTAG 2 cut(s) 1268, 1707
BfmI CTRYAG 3 cut(s) 1360, 1456, 2074
BfoI RGCGCY 2 cut(s) 188, 2841
BglII AGATCT 2 cut(s) 974, 1030
BisI GCNGC 9 cut(s) 256, 259, 664, 764, 1015, 1716, 2077, 2470, 2949
BlsI GCNGC 9 cut(s) 257, 260, 665, 765, 1016, 1717, 2078, 2471, 2950
BmcAI AGTACT 1 cut(s) 568
Bme1390I CCNGG 6 cut(s) 1196, 1753, 1918, 2590, 2762, 2763
Bme18I GGWCC 6 cut(s) 310, 1233, 1386, 1466, 2271, 2740
BmeT110I CYCGRG 2 cut(s) 962, 2761
BmiI GGNNCC 9 cut(s) 898, 1234, 1387, 1388, 1419, 1689, 2272, 2741, 2742
BmrFI CCNGG 6 cut(s) 1196, 1753, 1918, 2590, 2762, 2763
BmrI ACTGGG 2 cut(s) 1392, 1423
BmsI GCATC 5 cut(s) 101, 174, 865, 887, 1702
BmuI ACTGGG 2 cut(s) 1392, 1423
BpiI GAAGAC 1 cut(s) 942
BplI GAGNNNNNCTC 4 cut(s) 174, 206, 2959, 2991
BpmI CTGGAG 4 cut(s) 1920, 1939, 1966, 2887
Bpu10I CCTNAGC 1 cut(s) 659
BpuEI CTTGAG 2 cut(s) 908, 2369
BpuMI CCSGG 4 cut(s) 1753, 2590, 2762, 2763
Bsa29I ATCGAT 1 cut(s) 2212
BsaBI GATNNNNATC 3 cut(s) 157, 2179, 2784
BsaHI GRCGYC 1 cut(s) 439
BsaJI CCNNGG 5 cut(s) 1194, 1650, 2248, 2761, 2845
BsaWI WCCGGW 1 cut(s) 2660
BsaXI ACNNNNNCTCC 4 cut(s) 1625, 1655, 2860, 2890
Bsc4I CCNNNNNNNGG 7 cut(s) 530, 793, 1475, 1651, 2736, 2768, 2780
Bse1I ACTGG 6 cut(s) 1209, 1387, 1418, 1983, 2122, 2521
Bse21I CCTNAGG 1 cut(s) 1019
Bse3DI GCAATG 1 cut(s) 1446
Bse8I GATNNNNATC 3 cut(s) 157, 2179, 2784
BseAI TCCGGA 1 cut(s) 2660
BseBI CCWGG 2 cut(s) 1196, 1918
BseCI ATCGAT 1 cut(s) 2212
BseDI CCNNGG 5 cut(s) 1194, 1650, 2248, 2761, 2845
BseGI GGATG 5 cut(s) 312, 782, 1190, 2705, 2726
BseJI GATNNNNATC 3 cut(s) 157, 2179, 2784
BseLI CCNNNNNNNGG 7 cut(s) 530, 793, 1475, 1651, 2736, 2768, 2780
BseMI GCAATG 1 cut(s) 1446
BseMII CTCAG 9 cut(s) 205, 577, 1153, 1277, 1278, 1551, 1968, 2015, 2615
BseNI ACTGG 6 cut(s) 1209, 1387, 1418, 1983, 2122, 2521
BseSI GKGCMC 3 cut(s) 900, 1691, 2489
BseXI GCAGC 8 cut(s) 242, 675, 750, 1026, 1702, 2088, 2481, 2960
BseYI CCCAGC 2 cut(s) 759, 836
BsgI GTGCAG 2 cut(s) 89, 1033
BshFI GGCC 8 cut(s) 898, 1689, 1756, 1930, 2253, 2309, 2357, 2772
BshVI ATCGAT 1 cut(s) 2212
BsiHKAI GWGCWC 1 cut(s) 2222
BsiHKCI CYCGRG 2 cut(s) 962, 2761
BsiSI CCGG 5 cut(s) 222, 1752, 2589, 2661, 2762
BslFI GGGAC 5 cut(s) 1266, 1372, 2284, 2388, 2726
BslI CCNNNNNNNGG 7 cut(s) 530, 793, 1475, 1651, 2736, 2768, 2780
BsmAI GTCTC 5 cut(s) 172, 344, 1497, 1957, 2345
BsmBI CGTCTC 2 cut(s) 172, 2345
BsmFI GGGAC 5 cut(s) 1266, 1372, 2284, 2388, 2726
BsnI GGCC 8 cut(s) 898, 1689, 1756, 1930, 2253, 2309, 2357, 2772
BsoBI CYCGRG 2 cut(s) 962, 2761
Bsp120I GGGCCC 2 cut(s) 896, 1687
Bsp1286I GDGCHC 4 cut(s) 900, 1691, 2222, 2489
Bsp13I TCCGGA 1 cut(s) 2660
BspACI CCGC 3 cut(s) 259, 787, 2196
BspANI GGCC 8 cut(s) 898, 1689, 1756, 1930, 2253, 2309, 2357, 2772
BspCNI CTCAG 9 cut(s) 204, 576, 1152, 1276, 1279, 1550, 1967, 2016, 2614
BspDI ATCGAT 1 cut(s) 2212
BspEI TCCGGA 1 cut(s) 2660
BspHI TCATGA 2 cut(s) 1377, 1408
BspLI GGNNCC 9 cut(s) 898, 1234, 1387, 1388, 1419, 1689, 2272, 2741, 2742
BspMAI CTGCAG 2 cut(s) 1460, 2078
BspPI GGATC 3 cut(s) 2028, 2149, 2175
BsrDI GCAATG 1 cut(s) 1446
BsrI ACTGG 6 cut(s) 1209, 1387, 1418, 1983, 2122, 2521
BssECI CCNNGG 5 cut(s) 1194, 1650, 2248, 2761, 2845
BssNI GRCGYC 1 cut(s) 439
BssSI CACGAG 1 cut(s) 1911
BssT1I CCWWGG 2 cut(s) 1650, 2248
Bst2BI CACGAG 1 cut(s) 1911
Bst2UI CCWGG 2 cut(s) 1196, 1918
Bst4CI ACNGT 6 cut(s) 120, 287, 2315, 2324, 2333, 2755
Bst6I CTCTTC 4 cut(s) 168, 628, 1698, 2229
BstACI GRCGYC 1 cut(s) 439
BstC8I GCNNGC 2 cut(s) 227, 2359
BstEII GGTNACC 1 cut(s) 533
BstF5I GGATG 5 cut(s) 312, 782, 1190, 2705, 2726
BstH2I RGCGCY 2 cut(s) 188, 2841
BstHHI GCGC 2 cut(s) 187, 2840
BstMAI GTCTC 5 cut(s) 172, 344, 1497, 1957, 2345
BstMWI GCNNNNNNNGC 1 cut(s) 2954
BstNI CCWGG 2 cut(s) 1196, 1918
BstNSI RCATGY 2 cut(s) 1858, 2548
BstPI GGTNACC 1 cut(s) 533
BstSCI CCNGG 6 cut(s) 1194, 1751, 1916, 2588, 2760, 2761
BstSFI CTRYAG 3 cut(s) 1360, 1456, 2074
BstSLI GKGCMC 3 cut(s) 900, 1691, 2489
BstV1I GCAGC 8 cut(s) 242, 675, 750, 1026, 1702, 2088, 2481, 2960
BstV2I GAAGAC 1 cut(s) 942
BstX2I RGATCY 3 cut(s) 974, 1030, 2020
BstXI CCANNNNNNTGG 5 cut(s) 1157, 1557, 1616, 1917, 1990
BstYI RGATCY 3 cut(s) 974, 1030, 2020
Bsu15I ATCGAT 1 cut(s) 2212
Bsu36I CCTNAGG 1 cut(s) 1019
BsuRI GGCC 8 cut(s) 898, 1689, 1756, 1930, 2253, 2309, 2357, 2772
BsuTUI ATCGAT 1 cut(s) 2212
BtgZI GCGATG 1 cut(s) 1725
BtsCI GGATG 5 cut(s) 312, 782, 1190, 2705, 2726
Cac8I GCNNGC 2 cut(s) 227, 2359
CciI TCATGA 2 cut(s) 1377, 1408
CfoI GCGC 2 cut(s) 187, 2840
Cfr9I CCCGGG 1 cut(s) 2761
ClaI ATCGAT 1 cut(s) 2212
Csp6I GTAC 5 cut(s) 288, 567, 1005, 1092, 2329
CspCI CAANNNNNGTGG 2 cut(s) 1827, 1862
CviQI GTAC 5 cut(s) 288, 567, 1005, 1092, 2329
DraI TTTAAA 1 cut(s) 1866
DrdI GACNNNNNNGTC 1 cut(s) 1645
DseDI GACNNNNNNGTC 1 cut(s) 1645
EaeI YGGCCR 3 cut(s) 1928, 2251, 2355
Eam1104I CTCTTC 4 cut(s) 168, 628, 1698, 2229
EarI CTCTTC 4 cut(s) 168, 628, 1698, 2229
Eco130I CCWWGG 2 cut(s) 1650, 2248
Eco24I GRGCYC 2 cut(s) 900, 1691
Eco32I GATATC 1 cut(s) 1572
Eco47I GGWCC 6 cut(s) 310, 1233, 1386, 1466, 2271, 2740
Eco47III AGCGCT 2 cut(s) 186, 2839
Eco57I CTGAAG 3 cut(s) 1145, 1472, 2658
Eco81I CCTNAGG 1 cut(s) 1019
Eco88I CYCGRG 2 cut(s) 962, 2761
Eco91I GGTNACC 1 cut(s) 533
EcoO109I RGGNCCY 6 cut(s) 897, 1386, 1466, 1687, 1688, 2740
EcoO65I GGTNACC 1 cut(s) 533
EcoRI GAATTC 3 cut(s) 1291, 1904, 2667
EcoRII CCWGG 2 cut(s) 1194, 1916
EcoRV GATATC 1 cut(s) 1572
EcoT14I CCWWGG 2 cut(s) 1650, 2248
EcoT22I ATGCAT 2 cut(s) 167, 880
EcoT38I GRGCYC 2 cut(s) 900, 1691
ErhI CCWWGG 2 cut(s) 1650, 2248
Esp3I CGTCTC 2 cut(s) 172, 2345
FalI AAGNNNNNCTT 7 cut(s) 1503, 1535, 2113, 2145, 2656, 2688, 2977
FaqI GGGAC 5 cut(s) 1266, 1372, 2284, 2388, 2726
FauI CCCGC 1 cut(s) 794
FbaI TGATCA 3 cut(s) 331, 1774, 2785
FblI GTMKAC 1 cut(s) 1834
Fnu4HI GCNGC 9 cut(s) 256, 259, 664, 764, 1015, 1716, 2077, 2470, 2949
FokI GGATG 5 cut(s) 319, 769, 1177, 2692, 2713
FriOI GRGCYC 2 cut(s) 900, 1691
Fsp4HI GCNGC 9 cut(s) 256, 259, 664, 764, 1015, 1716, 2077, 2470, 2949
FspBI CTAG 2 cut(s) 1268, 1707
GlaI GCGC 2 cut(s) 186, 2839
GluI GCNGC 9 cut(s) 256, 259, 664, 764, 1015, 1716, 2077, 2470, 2949
GsaI CCCAGC 2 cut(s) 763, 840
GsuI CTGGAG 4 cut(s) 1920, 1939, 1966, 2887
HaeII RGCGCY 2 cut(s) 188, 2841
HaeIII GGCC 8 cut(s) 898, 1689, 1756, 1930, 2253, 2309, 2357, 2772
HapII CCGG 5 cut(s) 222, 1752, 2589, 2661, 2762
HhaI GCGC 2 cut(s) 187, 2840
Hin1I GRCGYC 1 cut(s) 439
Hin6I GCGC 2 cut(s) 185, 2838
HinP1I GCGC 2 cut(s) 185, 2838
HindIII AAGCTT 3 cut(s) 464, 1622, 2002
HinfI GANTC 7 cut(s) 517, 1346, 1669, 1759, 1921, 2702, 2922
HpaII CCGG 5 cut(s) 222, 1752, 2589, 2661, 2762
HphI GGTGA 9 cut(s) 608, 685, 784, 1265, 2422, 2459, 2573, 2624, 2795
Hpy166II GTNNAC 4 cut(s) 655, 775, 1273, 1835
Hpy8I GTNNAC 4 cut(s) 655, 775, 1273, 1835
Hpy99I CGWCG 1 cut(s) 772
HpyCH4III ACNGT 6 cut(s) 120, 287, 2315, 2324, 2333, 2755
HpyCH4IV ACGT 3 cut(s) 403, 439, 2489
HpyF10VI GCNNNNNNNGC 1 cut(s) 2954
HpySE526I ACGT 3 cut(s) 403, 439, 2489
Hsp92I GRCGYC 1 cut(s) 439
HspAI GCGC 2 cut(s) 185, 2838
KflI GGGWCCC 2 cut(s) 1386, 2740
Kpn2I TCCGGA 1 cut(s) 2660
Ksp22I TGATCA 3 cut(s) 331, 1774, 2785
Lsp1109I GCAGC 8 cut(s) 242, 675, 750, 1026, 1702, 2088, 2481, 2960
LweI GCATC 5 cut(s) 101, 174, 865, 887, 1702
MaeI CTAG 2 cut(s) 1268, 1707
MaeII ACGT 3 cut(s) 403, 439, 2489
MaeIII GTNAC 5 cut(s) 208, 404, 533, 691, 1513
MfeI CAATTG 3 cut(s) 1778, 2549, 2958
MflI RGATCY 3 cut(s) 974, 1030, 2020
MhlI GDGCHC 4 cut(s) 900, 1691, 2222, 2489
MlsI TGGCCA 2 cut(s) 1930, 2253
MluNI TGGCCA 2 cut(s) 1930, 2253
MlyI GAGTC 3 cut(s) 1355, 1678, 1930
MmeI TCCRAC 5 cut(s) 1278, 1323, 1453, 1603, 2208
Mox20I TGGCCA 2 cut(s) 1930, 2253
Mph1103I ATGCAT 2 cut(s) 167, 880
MroI TCCGGA 1 cut(s) 2660
MroXI GAANNNNTTC 3 cut(s) 1046, 1079, 2671
MscI TGGCCA 2 cut(s) 1930, 2253
MslI CAYNNNNRTG 5 cut(s) 160, 671, 1824, 2731, 2793
Msp20I TGGCCA 2 cut(s) 1930, 2253
MspA1I CMGCKG 3 cut(s) 261, 763, 840
MspI CCGG 5 cut(s) 222, 1752, 2589, 2661, 2762
MspR9I CCNGG 6 cut(s) 1196, 1753, 1918, 2590, 2762, 2763
MunI CAATTG 3 cut(s) 1778, 2549, 2958
MvaI CCWGG 2 cut(s) 1196, 1918
MwoI GCNNNNNNNGC 1 cut(s) 2954
NciI CCSGG 4 cut(s) 1753, 2590, 2762, 2763
NlaIV GGNNCC 9 cut(s) 898, 1234, 1387, 1388, 1419, 1689, 2272, 2741, 2742
NmeAIII GCCGAG 1 cut(s) 2826
NmuCI GTSAC 2 cut(s) 691, 1513
NsiI ATGCAT 2 cut(s) 167, 880
NspI RCATGY 2 cut(s) 1858, 2548
OliI CACNNNNGTG 1 cut(s) 671
PagI TCATGA 2 cut(s) 1377, 1408
PciI ACATGT 1 cut(s) 1854
PcsI WCGNNNNNNNCGW 1 cut(s) 1449
PdmI GAANNNNTTC 3 cut(s) 1046, 1079, 2671
PfeI GAWTC 4 cut(s) 517, 1759, 2702, 2922
PflFI GACNNNGTC 1 cut(s) 1384
PflMI CCANNNNNTGG 1 cut(s) 530
PkrI GCNGC 9 cut(s) 257, 260, 665, 765, 1016, 1717, 2078, 2471, 2950
PleI GAGTC 3 cut(s) 1354, 1677, 1929
PpsI GAGTC 3 cut(s) 1354, 1677, 1929
PpuMI RGGWCCY 3 cut(s) 1386, 1466, 2740
PscI ACATGT 1 cut(s) 1854
PshBI ATTAAT 2 cut(s) 372, 822
Psp5II RGGWCCY 3 cut(s) 1386, 1466, 2740
Psp6I CCWGG 2 cut(s) 1194, 1916
PspEI GGTNACC 1 cut(s) 533
PspFI CCCAGC 2 cut(s) 759, 836
PspGI CCWGG 2 cut(s) 1194, 1916
PspN4I GGNNCC 9 cut(s) 898, 1234, 1387, 1388, 1419, 1689, 2272, 2741, 2742
PspOMI GGGCCC 2 cut(s) 896, 1687
PspPPI RGGWCCY 3 cut(s) 1386, 1466, 2740
PsrI GAACNNNNNNTAC 2 cut(s) 389, 421
PstI CTGCAG 2 cut(s) 1460, 2078
PsuI RGATCY 3 cut(s) 974, 1030, 2020
PsyI GACNNNGTC 1 cut(s) 1384
PvuII CAGCTG 2 cut(s) 763, 840
RsaI GTAC 5 cut(s) 289, 568, 1006, 1093, 2330
RsaNI GTAC 5 cut(s) 288, 567, 1005, 1092, 2329
RseI CAYNNNNRTG 5 cut(s) 160, 671, 1824, 2731, 2793
SatI GCNGC 9 cut(s) 256, 259, 664, 764, 1015, 1716, 2077, 2470, 2949
ScaI AGTACT 1 cut(s) 568
SchI GAGTC 3 cut(s) 1355, 1678, 1930
ScrFI CCNGG 6 cut(s) 1196, 1753, 1918, 2590, 2762, 2763
SduI GDGCHC 4 cut(s) 900, 1691, 2222, 2489
SfaNI GCATC 5 cut(s) 101, 174, 865, 887, 1702
SfcI CTRYAG 3 cut(s) 1360, 1456, 2074
SinI GGWCC 6 cut(s) 310, 1233, 1386, 1466, 2271, 2740
SmaI CCCGGG 1 cut(s) 2763
SmiMI CAYNNNNRTG 5 cut(s) 160, 671, 1824, 2731, 2793
SmlI CTYRAG 2 cut(s) 923, 2348
SmoI CTYRAG 2 cut(s) 923, 2348
SsiI CCGC 3 cut(s) 259, 787, 2196
SspMI CTAG 2 cut(s) 1268, 1707
StyD4I CCNGG 6 cut(s) 1194, 1751, 1916, 2588, 2760, 2761
StyI CCWWGG 2 cut(s) 1650, 2248
TaaI ACNGT 6 cut(s) 120, 287, 2315, 2324, 2333, 2755
TaiI ACGT 3 cut(s) 406, 442, 2492
TaqI TCGA 6 cut(s) 168, 1278, 1443, 1728, 2212, 2920
TaqII GACCGA 1 cut(s) 971
TatI WGTACW 1 cut(s) 566
TauI GCSGC 1 cut(s) 261
TfiI GAWTC 4 cut(s) 517, 1759, 2702, 2922
TseFI GTSAC 2 cut(s) 691, 1513
TseI GCWGC 8 cut(s) 255, 663, 763, 1014, 1715, 2076, 2469, 2948
Tsp45I GTSAC 2 cut(s) 691, 1513
TspGWI ACGGA 1 cut(s) 1523
TspMI CCCGGG 1 cut(s) 2761
Tth111I GACNNNGTC 1 cut(s) 1384
Van91I CCANNNNNTGG 1 cut(s) 530
VpaK11BI GGWCC 6 cut(s) 310, 1233, 1386, 1466, 2271, 2740
VspI ATTAAT 2 cut(s) 372, 822
XceI RCATGY 2 cut(s) 1858, 2548
XcmI CCANNNNNNNNNTGG 1 cut(s) 2404
XmaI CCCGGG 1 cut(s) 2761
XmiI GTMKAC 1 cut(s) 1834
XmnI GAANNNNTTC 3 cut(s) 1046, 1079, 2671
XspI CTAG 2 cut(s) 1268, 1707
ZraI GACGTC 1 cut(s) 440
ZrmI AGTACT 1 cut(s) 568
Zsp2I ATGCAT 2 cut(s) 167, 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.