MD05G1246500.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
37789716 .. 37792658
2943 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1246500.v1.1.491

Sequence Viewer

Length: 2943 bp
ATGGATAGCCACTATCACCTCAGTATTGCTCGCTATTTACTTATACTTCTTTTGATCTCTTCCTACATGCAGACTACTACCAAACTCTGTTTCTGTTTGGACGGTGATGAACTTTCAAGCAGTGTGAAAACAAATTCATGCATCGACGAAGAAAGACAATCGCTTCTCATCTTTAAGCAACATCTTGTTGATCCTTCTGGTAGGCTTTCCTCTTGGGTGGGCCATGATTGCTGTCAATGGGAAGGTATTTCATGCAACAACAACACTGGTCATGTCGTGAAGATGGACCTCCGGAATCCATATCCGTATTCCATTTCTGATGACCAGTGGGAGTACGAAGCTTATGAAAAGTCTCTCTTGGGAGGTAAGATAAATGCTTCTCTGTTGGGCTTGAAACATTTAAATTACCTGGACCTAAGCAAGAATTTTTTTCATAGCAGTCAAATTCCTAAGTTCTTTGGGGAGCTTAAAAGTTTGCAATATCTCAATCTCTCCTTTGCGTCATTTGGAGGAGAGATTCCCCTTTCTCTTGGTAACCTGTCAAGCCTTAATTTTCTTGACCTTGGGTGGAATCAACTCTCATCTTCAAAAAATTTGAATTGGCTTTCTCACCTCTCTTCTCTAGAATACCTTAATCTCAATTACATTAACCTTAGCAGCACTGGAGTCAGTTGGGCGTATGATATTTCGATGCTTCCTTCATTGTTAGAGTTACACTTGTCTTCGTGCCAAATTGAAAGCATTCCACTCTCATTGCAGGGAATTAACTTGACATCACTTTTTAATCTTACCAGCCTCATAACTCTTGATCTATCCGGGAATAATTTCAATGGGCCTTTTCCAAATGAACTTGCATGTCTCAAATCTCTGGAATACCTTGATTTATCTAAAACAGGCTTAAAAGGTCAAGTTCCCAAAGTCTTTGGAAATTTTTGCAAGCTAAAGGTCTTGAGTCTTTCTGGAAACAAAATTGATGGGAGGGTTGGAGACTTTTTGAGGAGTTTCTCAAATTGTTCAAATAACCCATTAGAGTCATTAGATTTGTCTAACTGTGAGCTGGAAAGCCAAATGCCGGCCTCCTTAGGAATATTAAAAAGCTTGCAGTATCTCAACCTTTGTGGAAACTATTTGTGGGGCTCAATTCCAGATTCCATCGGAAACTTGTCATCCTTGGAAACATTGGACATCTCTAATAATAAGATGAATGGCTCCATTCCAGATTCCATTGGAAACTTGTCATCTTTGAAAACTTTGGACCTCTCTTTTAATAAGATGGAAGGCTCTATTCCACAAAGTATGGGACAACTCACTCATCTAGTTTCTCTGCGTCTATATGGTAATTTATGGGAAGGCATTCTAACAGAAGCCCATTTCATAAACCTTACCAAATTACAAGATCTGCAAGTAGGAAACAAAGACCGACCCATGTCCCTCATTTTCAACGTGGCTTATGATTGGATTCCTCCTTTCAAGCTCCACACAATTGAGATCATAAACTGTCAAGTAAGTCCCGGTTTTTGGGTATGGCTTCAAGCTCAAACTAAACTGTCTTCTGTTATTCTTCGTGGTAATGGAATGTCGGATTCCATTCCAGAGGAATGGTTGTTGCAGATATCTTCCCAACTCATCCAACTAGATTTGTCTTACAACCAATTTTGTGGAAACCTTCCATCACATTTGAAATTTCCAAATATAAATTCTATTGATTTGAGTCATAATCAATTGGAGGGCCCACTCCCACTTTGGTGGTCCACTAATGTCTTTTCTCTTGATCTTGAAAGCAATTTTTTTTCCGGACCAATTCCCTCCAATATTAACCAAATGATGCCTAATTTGAAAACTCTGTATCTTTCTGAGAATCATTTGAATGGCACTATTCCTCCCGGTGTTTGCAATATGGAGCAATTGAAAATCTTGTCCCTGAGGAGCAATCAATTTTCTGGGGAATTCCTTCGTGCATGGAGTGTGGAGAGCAATATGATGTTTCTAGATGTTGGTTACAACAATCTCTCTGGTAATATTCCTAGTTCATTGGGGGTATTAAGTTCACTTCGAATATTAAAGCTCAACAACAACAATTTTGGCGGTGAAATACCCGATTCCTTGCAGAATTGTTCTAGTTTGGAGAGTATGGATCTTGGGGACAACAAGTTAACTGGCAACATACCTCTATGGATAGGAGGATCAAATTCATCCATGTGGTGTATGCTACGATTACGGTCCAACTATTTCAGTGGACATATTTCCCCACAATTGTGCAATCTTCACCACCTTCATATCCTTGACCTCAGTCACAACAACCTTTCAGGTACTATTCCCATGTGTTTAAATAATTGGACTTCACTGGTGGACGATTCCAATACAAACTCTACAGGTTATATTGAGCAAGCCACACTAACACTAAAAGGAAGCGAACTTGTGTACAACAAGACTCTGATGTTGGTAAAGAGCATTGATCTTTCATCAAATAATTTACAAGGTGAAATCCCTCAAGAAATAAGCAGCCTCATTTTATTGGGTACGTTGAACTTGTCAAAGAATCAATTGACTGGAAGGATCCCCTCCAAGATTGGAAACTTACATTTGCTTGAAACTCTTGATCTCTCACACAACCACCTTTCAGGTCAAATTCCTCAAAGCTTGTCATCTTTGACCTCTTTGTCCCACTTGAATTTGTCTTGCAACAACTTGTCTAGAAGAATTCCTTCTGGAAACCAACTTCAAACGCTCAATTTTTCGTCCATTTATATGGACAATCCATTGCTATGTGGTGCTCCTCTCTCAACTAAGTGCCCTGAAGATGACAATTTTACTACTAAGGATGCAAAAGACAAAAATGAAGATGGTGACAATGATAAATTGTGGTTCTCTGTCAGCGTGGTACTTGGCTTCATCGTAGGCTTTTGGAGCGTTTGCGGCATATTGATCTCAAAGACATCATAG

Protein Analysis

981

Amino Acids

108.79

Weight (kDa)

5.39

Isoelectric Point (pI)

40.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 49 - 86 8.3e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 129 - 272 1.3e-09 Leucine-rich repeat region
LRR_8 PF13855 343 - 400 2.1e-07 Leucine rich repeat
LRR_14 PF23598 345 - 548 4.4e-16 Leucine-rich repeat region
LRR_4 PF12799 390 - 423 1e-05 Leucine Rich repeats (2 copies)
LRR_14 PF23598 824 - 915 3.4e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2659
AccIII TCCGGA 2 cut(s) 291, 1793
AciI CCGC 2 cut(s) 2085, 2916
AclWI GGATC 5 cut(s) 185, 2142, 2191, 2551, 2564
AcuI CTGAAG 1 cut(s) 2817
AfaI GTAC 5 cut(s) 335, 2311, 2423, 2521, 2883
AfiI CCNNNNNNNGG 2 cut(s) 1072, 1518
AjnI CCWGG 1 cut(s) 408
AjuI GAANNNNNNNTTGG 4 cut(s) 74, 106, 1681, 1713
AleI CACNNNNGTG 2 cut(s) 1744, 2254
AluBI AGCT 9 cut(s) 341, 466, 940, 1057, 1098, 1474, 1535, 2065, 2640
AluI AGCT 9 cut(s) 341, 466, 940, 1057, 1098, 1474, 1535, 2065, 2640
Alw21I GWGCWC 1 cut(s) 2776
Alw26I GTCTC 3 cut(s) 357, 863, 981
AlwI GGATC 5 cut(s) 185, 2142, 2191, 2551, 2564
Aor13HI TCCGGA 2 cut(s) 291, 1793
AoxI GGCC 4 cut(s) 220, 833, 1074, 1729
ApaI GGGCCC 1 cut(s) 1733
ApeKI GCWGC 2 cut(s) 657, 2502
Asp700I GAANNNNTTC 5 cut(s) 741, 824, 1353, 1950, 2704
AsuC2I CCSGG 3 cut(s) 817, 1512, 1884
AsuHPI GGTGA 7 cut(s) 8, 116, 602, 2099, 2258, 2492, 2858
AsuII TTCGAA 1 cut(s) 2053
AvaII GGWCC 6 cut(s) 286, 412, 1255, 1749, 1796, 2220
AxyI CCTNAGG 2 cut(s) 1081, 1922
BaeGI GKGCMC 2 cut(s) 1733, 2795
BamHI GGATCC 1 cut(s) 2556
BanII GRGCYC 2 cut(s) 1139, 1733
BbsI GAAGAC 2 cut(s) 714, 1542
Bbv12I GWGCWC 1 cut(s) 2776
BbvI GCAGC 2 cut(s) 669, 2514
BccI CCATC 6 cut(s) 277, 968, 1160, 1267, 1678, 2837
BciT130I CCWGG 1 cut(s) 410
BcnI CCSGG 3 cut(s) 817, 1512, 1884
BcoDI GTCTC 3 cut(s) 357, 863, 981
BfaI CTAG 7 cut(s) 623, 1316, 1634, 1988, 2025, 2118, 2694
BfmI CTRYAG 1 cut(s) 2370
BglII AGATCT 1 cut(s) 1396
BisI GCNGC 3 cut(s) 658, 2503, 2917
BlsI GCNGC 3 cut(s) 659, 2504, 2918
Bme1390I CCNGG 4 cut(s) 410, 817, 1512, 1884
Bme18I GGWCC 6 cut(s) 286, 412, 1255, 1749, 1796, 2220
BmiI GGNNCC 3 cut(s) 1210, 1731, 2558
BmrFI CCNGG 4 cut(s) 410, 817, 1512, 1884
BmsI GCATC 4 cut(s) 150, 681, 1815, 2812
BoxI GACNNNNGTC 2 cut(s) 1426, 2289
BpiI GAAGAC 2 cut(s) 714, 1542
BpmI CTGGAG 1 cut(s) 684
Bpu10I CCTNAGC 2 cut(s) 416, 653
Bpu14I TTCGAA 1 cut(s) 2053
BpuEI CTTGAG 2 cut(s) 970, 2475
BpuMI CCSGG 3 cut(s) 817, 1512, 1884
BsaJI CCNNGG 2 cut(s) 562, 1170
BsaWI WCCGGW 2 cut(s) 291, 1793
BsaXI ACNNNNNCTCC 2 cut(s) 1864, 1894
Bsc4I CCNNNNNNNGG 2 cut(s) 1072, 1518
Bse118I RCCGGY 1 cut(s) 1072
Bse1I ACTGG 6 cut(s) 271, 325, 667, 2161, 2349, 2554
Bse21I CCTNAGG 2 cut(s) 1081, 1922
Bse3DI GCAATG 2 cut(s) 752, 2759
BseAI TCCGGA 2 cut(s) 291, 1793
BseBI CCWGG 1 cut(s) 410
BseDI CCNNGG 2 cut(s) 562, 1170
BseGI GGATG 4 cut(s) 1166, 1626, 2192, 2827
BseLI CCNNNNNNNGG 2 cut(s) 1072, 1518
BseMI GCAATG 2 cut(s) 752, 2759
BseMII CTCAG 4 cut(s) 34, 1845, 1913, 2302
BseNI ACTGG 6 cut(s) 271, 325, 667, 2161, 2349, 2554
BseRI GAGGAG 4 cut(s) 525, 1012, 1939, 2766
BseSI GKGCMC 2 cut(s) 1733, 2795
BseXI GCAGC 2 cut(s) 669, 2514
BshFI GGCC 4 cut(s) 222, 835, 1076, 1731
BsiHKAI GWGCWC 1 cut(s) 2776
BsiSI CCGG 6 cut(s) 292, 816, 1073, 1512, 1794, 1884
BslFI GGGAC 6 cut(s) 1314, 1414, 1494, 1903, 2156, 2647
BslI CCNNNNNNNGG 2 cut(s) 1072, 1518
BsmAI GTCTC 3 cut(s) 357, 863, 981
BsmFI GGGAC 6 cut(s) 1314, 1414, 1494, 1903, 2156, 2647
BsmI GAATGC 2 cut(s) 741, 1353
BsnI GGCC 4 cut(s) 222, 835, 1076, 1731
Bsp119I TTCGAA 1 cut(s) 2053
Bsp120I GGGCCC 1 cut(s) 1729
Bsp1286I GDGCHC 4 cut(s) 1139, 1733, 2776, 2795
Bsp13I TCCGGA 2 cut(s) 291, 1793
Bsp1407I TGTACA 1 cut(s) 2421
BspACI CCGC 2 cut(s) 2085, 2916
BspANI GGCC 4 cut(s) 222, 835, 1076, 1731
BspCNI CTCAG 4 cut(s) 33, 1846, 1914, 2301
BspEI TCCGGA 2 cut(s) 291, 1793
BspLI GGNNCC 3 cut(s) 1210, 1731, 2558
BspPI GGATC 5 cut(s) 185, 2142, 2191, 2551, 2564
BspT104I TTCGAA 1 cut(s) 2053
BsrDI GCAATG 2 cut(s) 752, 2759
BsrFI RCCGGY 1 cut(s) 1072
BsrGI TGTACA 1 cut(s) 2421
BsrI ACTGG 6 cut(s) 271, 325, 667, 2161, 2349, 2554
BssAI RCCGGY 1 cut(s) 1072
BssECI CCNNGG 2 cut(s) 562, 1170
BssT1I CCWWGG 2 cut(s) 562, 1170
Bst2UI CCWGG 1 cut(s) 410
Bst4CI ACNGT 5 cut(s) 104, 1052, 1499, 1548, 2220
Bst6I CTCTTC 2 cut(s) 64, 622
BstAUI TGTACA 1 cut(s) 2421
BstBI TTCGAA 1 cut(s) 2053
BstC8I GCNNGC 5 cut(s) 31, 938, 1074, 1100, 2388
BstEII GGTNACC 1 cut(s) 533
BstF5I GGATG 4 cut(s) 1166, 1626, 2192, 2827
BstMAI GTCTC 3 cut(s) 357, 863, 981
BstMWI GCNNNNNNNGC 3 cut(s) 228, 2907, 2916
BstNI CCWGG 1 cut(s) 410
BstNSI RCATGY 2 cut(s) 70, 858
BstPAI GACNNNNGTC 2 cut(s) 1426, 2289
BstPI GGTNACC 1 cut(s) 533
BstSCI CCNGG 4 cut(s) 408, 815, 1510, 1882
BstSFI CTRYAG 1 cut(s) 2370
BstSLI GKGCMC 2 cut(s) 1733, 2795
BstV1I GCAGC 2 cut(s) 669, 2514
BstV2I GAAGAC 2 cut(s) 714, 1542
BstX2I RGATCY 3 cut(s) 1396, 2134, 2556
BstXI CCANNNNNNTGG 4 cut(s) 1599, 1658, 1746, 2749
BstYI RGATCY 3 cut(s) 1396, 2134, 2556
Bsu36I CCTNAGG 2 cut(s) 1081, 1922
BsuRI GGCC 4 cut(s) 222, 835, 1076, 1731
BtsCI GGATG 4 cut(s) 1166, 1626, 2192, 2827
BtsI GCAGTG 1 cut(s) 127
BtsIMutI CAGTG 6 cut(s) 127, 264, 332, 660, 2239, 2342
Cac8I GCNNGC 5 cut(s) 31, 938, 1074, 1100, 2388
Cfr10I RCCGGY 1 cut(s) 1072
CseI GACGC 2 cut(s) 489, 1316
Csp6I GTAC 5 cut(s) 334, 2310, 2422, 2520, 2882
CspCI CAANNNNNGTGG 4 cut(s) 735, 770, 1099, 1134
CviQI GTAC 5 cut(s) 334, 2310, 2422, 2520, 2882
DraI TTTAAA 2 cut(s) 402, 2328
DrdI GACNNNNNNGTC 1 cut(s) 2659
DseDI GACNNNNNNGTC 1 cut(s) 2659
Eam1104I CTCTTC 2 cut(s) 64, 622
EarI CTCTTC 2 cut(s) 64, 622
Eco130I CCWWGG 2 cut(s) 562, 1170
Eco24I GRGCYC 2 cut(s) 1139, 1733
Eco32I GATATC 1 cut(s) 1614
Eco47I GGWCC 6 cut(s) 286, 412, 1255, 1749, 1796, 2220
Eco57I CTGAAG 1 cut(s) 2817
Eco81I CCTNAGG 2 cut(s) 1081, 1922
Eco91I GGTNACC 1 cut(s) 533
EcoO109I RGGNCCY 1 cut(s) 1729
EcoO65I GGTNACC 1 cut(s) 533
EcoRI GAATTC 2 cut(s) 1946, 2700
EcoRII CCWGG 1 cut(s) 408
EcoRV GATATC 1 cut(s) 1614
EcoT14I CCWWGG 2 cut(s) 562, 1170
EcoT22I ATGCAT 1 cut(s) 143
EcoT38I GRGCYC 2 cut(s) 1139, 1733
ErhI CCWWGG 2 cut(s) 562, 1170
FalI AAGNNNNNCTT 4 cut(s) 341, 373, 2689, 2721
FaqI GGGAC 6 cut(s) 1314, 1414, 1494, 1903, 2156, 2647
Fnu4HI GCNGC 3 cut(s) 658, 2503, 2917
FokI GGATG 4 cut(s) 1153, 1613, 2179, 2834
FriOI GRGCYC 2 cut(s) 1139, 1733
Fsp4HI GCNGC 3 cut(s) 658, 2503, 2917
FspBI CTAG 7 cut(s) 623, 1316, 1634, 1988, 2025, 2118, 2694
GluI GCNGC 3 cut(s) 658, 2503, 2917
GsuI CTGGAG 1 cut(s) 684
HaeIII GGCC 4 cut(s) 222, 835, 1076, 1731
HapII CCGG 6 cut(s) 292, 816, 1073, 1512, 1794, 1884
HgaI GACGC 2 cut(s) 489, 1316
HincII GTYRAC 1 cut(s) 2154
HindII GTYRAC 1 cut(s) 2154
HindIII AAGCTT 3 cut(s) 339, 1096, 2638
HpaI GTTAAC 1 cut(s) 2154
HpaII CCGG 6 cut(s) 292, 816, 1073, 1512, 1794, 1884
HphI GGTGA 7 cut(s) 8, 116, 602, 2099, 2258, 2492, 2858
Hpy166II GTNNAC 6 cut(s) 1752, 2048, 2154, 2237, 2350, 2422
Hpy188I TCNGA 5 cut(s) 319, 1157, 1582, 1855, 2436
Hpy8I GTNNAC 6 cut(s) 1752, 2048, 2154, 2237, 2350, 2422
Hpy99I CGWCG 1 cut(s) 149
HpyCH4III ACNGT 5 cut(s) 104, 1052, 1499, 1548, 2220
HpyCH4IV ACGT 2 cut(s) 1443, 2522
HpyF10VI GCNNNNNNNGC 3 cut(s) 228, 2907, 2916
HpySE526I ACGT 2 cut(s) 1443, 2522
Kpn2I TCCGGA 2 cut(s) 291, 1793
KroI GCCGGC 1 cut(s) 1072
KroNI GCCGGC 1 cut(s) 1074
KspAI GTTAAC 1 cut(s) 2154
LmnI GCTCC 7 cut(s) 463, 1214, 1479, 1900, 1926, 2779, 2907
Lsp1109I GCAGC 2 cut(s) 669, 2514
LweI GCATC 4 cut(s) 150, 681, 1815, 2812
MaeI CTAG 7 cut(s) 623, 1316, 1634, 1988, 2025, 2118, 2694
MaeII ACGT 2 cut(s) 1443, 2522
MaeIII GTNAC 5 cut(s) 533, 711, 1997, 2291, 2846
MfeI CAATTG 5 cut(s) 1482, 1721, 1904, 2252, 2543
MflI RGATCY 3 cut(s) 1396, 2134, 2556
MhlI GDGCHC 4 cut(s) 1139, 1733, 2776, 2795
MlyI GAGTC 5 cut(s) 675, 961, 1040, 1720, 2425
MmeI TCCRAC 4 cut(s) 964, 1560, 1654, 2247
Mph1103I ATGCAT 1 cut(s) 143
MroI TCCGGA 2 cut(s) 291, 1793
MroNI GCCGGC 1 cut(s) 1072
MroXI GAANNNNTTC 5 cut(s) 741, 824, 1353, 1950, 2704
MslI CAYNNNNRTG 6 cut(s) 1744, 1866, 2197, 2254, 2747, 2764
MspI CCGG 6 cut(s) 292, 816, 1073, 1512, 1794, 1884
MspR9I CCNGG 4 cut(s) 410, 817, 1512, 1884
MunI CAATTG 5 cut(s) 1482, 1721, 1904, 2252, 2543
Mva1269I GAATGC 2 cut(s) 741, 1353
MvaI CCWGG 1 cut(s) 410
MwoI GCNNNNNNNGC 3 cut(s) 228, 2907, 2916
NaeI GCCGGC 1 cut(s) 1074
NciI CCSGG 3 cut(s) 817, 1512, 1884
NgoMIV GCCGGC 1 cut(s) 1072
NlaIV GGNNCC 3 cut(s) 1210, 1731, 2558
NmuCI GTSAC 2 cut(s) 2291, 2846
NsiI ATGCAT 1 cut(s) 143
NspI RCATGY 2 cut(s) 70, 858
NspV TTCGAA 1 cut(s) 2053
OliI CACNNNNGTG 2 cut(s) 1744, 2254
PctI GAATGC 2 cut(s) 741, 1353
PdiI GCCGGC 1 cut(s) 1074
PdmI GAANNNNTTC 5 cut(s) 741, 824, 1353, 1950, 2704
PfoI TCCNGGA 1 cut(s) 815
PkrI GCNGC 3 cut(s) 659, 2504, 2918
PleI GAGTC 5 cut(s) 674, 960, 1039, 1719, 2425
PpsI GAGTC 5 cut(s) 674, 960, 1039, 1719, 2425
PshAI GACNNNNGTC 2 cut(s) 1426, 2289
Psp6I CCWGG 1 cut(s) 408
PspEI GGTNACC 1 cut(s) 533
PspGI CCWGG 1 cut(s) 408
PspN4I GGNNCC 3 cut(s) 1210, 1731, 2558
PspOMI GGGCCC 1 cut(s) 1729
PsuI RGATCY 3 cut(s) 1396, 2134, 2556
RsaI GTAC 5 cut(s) 335, 2311, 2423, 2521, 2883
RsaNI GTAC 5 cut(s) 334, 2310, 2422, 2520, 2882
RseI CAYNNNNRTG 6 cut(s) 1744, 1866, 2197, 2254, 2747, 2764
SatI GCNGC 3 cut(s) 658, 2503, 2917
SchI GAGTC 5 cut(s) 675, 961, 1040, 1720, 2425
ScrFI CCNGG 4 cut(s) 410, 817, 1512, 1884
SduI GDGCHC 4 cut(s) 1139, 1733, 2776, 2795
SfaNI GCATC 4 cut(s) 150, 681, 1815, 2812
SfcI CTRYAG 1 cut(s) 2370
SfuI TTCGAA 1 cut(s) 2053
SinI GGWCC 6 cut(s) 286, 412, 1255, 1749, 1796, 2220
SmiI ATTTAAAT 1 cut(s) 402
SmiMI CAYNNNNRTG 6 cut(s) 1744, 1866, 2197, 2254, 2747, 2764
SmlI CTYRAG 2 cut(s) 949, 2490
SmoI CTYRAG 2 cut(s) 949, 2490
SsiI CCGC 2 cut(s) 2085, 2916
SspI AATATT 4 cut(s) 1089, 1813, 2020, 2058
SspMI CTAG 7 cut(s) 623, 1316, 1634, 1988, 2025, 2118, 2694
StyD4I CCNGG 4 cut(s) 408, 815, 1510, 1882
StyI CCWWGG 2 cut(s) 562, 1170
SwaI ATTTAAAT 1 cut(s) 402
TaaI ACNGT 5 cut(s) 104, 1052, 1499, 1548, 2220
TaiI ACGT 2 cut(s) 1446, 2525
TaqI TCGA 3 cut(s) 144, 689, 2053
TaqII GACCGA 1 cut(s) 1434
TatI WGTACW 1 cut(s) 2421
TauI GCSGC 1 cut(s) 2919
TscAI CASTG 6 cut(s) 127, 271, 332, 667, 2239, 2349
TseFI GTSAC 2 cut(s) 2291, 2846
TseI GCWGC 2 cut(s) 657, 2502
Tsp45I GTSAC 2 cut(s) 2291, 2846
TspGWI ACGGA 1 cut(s) 294
TspRI CASTG 6 cut(s) 127, 271, 332, 667, 2239, 2349
VpaK11BI GGWCC 6 cut(s) 286, 412, 1255, 1749, 1796, 2220
XbaI TCTAGA 3 cut(s) 622, 1987, 2693
XceI RCATGY 2 cut(s) 70, 858
XcmI CCANNNNNNNNNTGG 1 cut(s) 1740
XmnI GAANNNNTTC 5 cut(s) 741, 824, 1353, 1950, 2704
XspI CTAG 7 cut(s) 623, 1316, 1634, 1988, 2025, 2118, 2694
Zsp2I ATGCAT 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.