MD05G1246400.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
37781203 .. 37782720
1518 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1246400.v1.1.491

Sequence Viewer

Length: 1518 bp
ATGTCCCTCATTTTCAACGCGGCTTATGATTGGATTCCTCCTTTCAAGCTCCACACAATTGAGATCATAAACTGTCAAGTAAGTCCCGGTTTTTGGGTATGGCTTCAAGCTCAAACTAAACTGTCTTCTGTTATTCTTCGTGGTAATGGAATGTCGGATTCCATTCCAGAGGAATGGTTGTTGCAGATATCTTCCCAACTCATCCAACTAGATTTGTCTTACAACCAATTTTGTGGAAACCTTCCATCACATTTGAAATTTCCAAATATAAATTCTATTGATTTGAGTCATAATCAATTGGAGGGCCCACTCCCACTTTGGTGGTCCACTAATGTCTTTTCTCTTGATCTTGAAAGCAATTTTTTTTCCGGACCAATTCCCTCCAATATTAACCAAATGATGCCCAATTTGAAAACTCTGTATCTTTCTGAGAATCATTTGAATGGCACTATTCCTCCCGGTGTTTGCAATATGGAGCAATTGAAAATCTTGTCCCTGAGGAGCAATCAATTTTCTGGGGAATTCCTTCGTGCATGGAGTGTGGAGAGCAATATGGTGTTTCTAGATGTTGGTTACAACAATCTCTCTGGTAATATTCCTAGTTCATTGGGGGTATTAAGTTCAATTCGAATATTAAAGCTCAACAACAACAATTTTGGCGGTGAAATACCCGATTCCTTGCAGAATTGTTCTAGTTTGGAGAGTATGGATCTTGGGGACAACAAGTTAACTGGCAACATACCTCTATGGATAGGAGGATCAAATTCATCCATGTGGTGTATGCTACGATTACGGTCCAACCATTTCAGTGGACATATTTCCCCACAATTGTGCAATCTTCACCACCTTCATATCCTTGACCTCAGTCACAACAACCTTTCAGGTACTATTCCCATGTGTTTAAATAATTGGACTTCACTGGTGGACGATTCCAATACAAACTCTACAGGTTATATTGAGCAAGCCACACTAACACTAAAAGGAAGCGAACTTGTGTACAACAAGACTCTGATGTTGGTAAAGAGCATTGATCTTTCATCAAATAATTTACAAGGTGAAATCCCTCAAGAAATAAGCAGCCTCATTTTATTGGGTACGTTGAACTTGTCAAAGAATCAATTGACTGGAAGGATCCCCTCCAAGATTGGAAACTTACATTTGCTTGAAACTCTTGATCTCTCACACAACCACCTTTCAGGTCAAATTCCTCAAAGCTTGTCATCTTTGACCTCTTTGTCCCACTTGAATTTGTCTTGCAACAACTTGTCTGGAAGAATTCCTTCTGGAAACCAACTTCAAACGCTCAATTTTTCGTCCATTTATATGGACAATCCATTGCTATGTGGTGCTCCTCTCTCAACTAAGTGCCCTGAAGATGACAATTTTACTACTAAGGATGCAAAAGACAAGAATGAAGATGGTGACAATGATAAATTGTGGTTCTCTGTCAGCGTGGTACTTGGCTTCATCGTAGGCTTTTGGAGCGTTTGCGGCATATTGATCTCAAAGACATCATAG

Protein Analysis

506

Amino Acids

55.85

Weight (kDa)

5.38

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 349 - 439 1.4e-07 Leucine-rich repeat region
LRR_8 PF13855 364 - 422 3.9e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1234
AccII CGCG 1 cut(s) 20
AccIII TCCGGA 1 cut(s) 368
AciI CCGC 3 cut(s) 20, 660, 1491
AclWI GGATC 4 cut(s) 717, 766, 1126, 1139
AcsI RAATTY 7 cut(s) 257, 271, 521, 763, 1203, 1246, 1275
AcuI CTGAAG 1 cut(s) 1392
AfaI GTAC 4 cut(s) 886, 998, 1096, 1458
AfiI CCNNNNNNNGG 1 cut(s) 93
AjuI GAANNNNNNNTTGG 2 cut(s) 256, 288
AleI CACNNNNGTG 2 cut(s) 319, 829
AluBI AGCT 4 cut(s) 49, 110, 640, 1215
AluI AGCT 4 cut(s) 49, 110, 640, 1215
Alw21I GWGCWC 1 cut(s) 1351
AlwI GGATC 4 cut(s) 717, 766, 1126, 1139
Aor13HI TCCGGA 1 cut(s) 368
AoxI GGCC 1 cut(s) 304
ApaI GGGCCC 1 cut(s) 308
ApeKI GCWGC 1 cut(s) 1077
ApoI RAATTY 7 cut(s) 257, 271, 521, 763, 1203, 1246, 1275
Asp700I GAANNNNTTC 2 cut(s) 525, 1279
AspS9I GGNCC 5 cut(s) 304, 305, 324, 371, 795
AsuC2I CCSGG 2 cut(s) 87, 459
AsuHPI GGTGA 4 cut(s) 674, 833, 1067, 1433
AsuII TTCGAA 1 cut(s) 628
AvaII GGWCC 3 cut(s) 324, 371, 795
AxyI CCTNAGG 1 cut(s) 497
BaeGI GKGCMC 2 cut(s) 308, 1370
BamHI GGATCC 1 cut(s) 1131
BanII GRGCYC 1 cut(s) 308
BbsI GAAGAC 1 cut(s) 117
Bbv12I GWGCWC 1 cut(s) 1351
BbvI GCAGC 1 cut(s) 1089
BccI CCATC 2 cut(s) 253, 1412
BcnI CCSGG 2 cut(s) 87, 459
BfaI CTAG 4 cut(s) 209, 563, 600, 693
BfmI CTRYAG 1 cut(s) 945
BisI GCNGC 3 cut(s) 21, 1078, 1492
BlsI GCNGC 3 cut(s) 22, 1079, 1493
Bme1390I CCNGG 2 cut(s) 87, 459
Bme18I GGWCC 3 cut(s) 324, 371, 795
BmgT120I GGNCC 5 cut(s) 304, 305, 324, 371, 795
BmiI GGNNCC 2 cut(s) 306, 1133
BmrFI CCNGG 2 cut(s) 87, 459
BmsI GCATC 2 cut(s) 390, 1387
BoxI GACNNNNGTC 1 cut(s) 864
BpiI GAAGAC 1 cut(s) 117
Bpu14I TTCGAA 1 cut(s) 628
BpuEI CTTGAG 1 cut(s) 1050
BpuMI CCSGG 2 cut(s) 87, 459
BsaWI WCCGGW 1 cut(s) 368
BsaXI ACNNNNNCTCC 2 cut(s) 439, 469
Bsc4I CCNNNNNNNGG 1 cut(s) 93
Bse1I ACTGG 3 cut(s) 736, 924, 1129
Bse21I CCTNAGG 1 cut(s) 497
Bse3DI GCAATG 1 cut(s) 1334
BseAI TCCGGA 1 cut(s) 368
BseGI GGATG 3 cut(s) 201, 767, 1402
BseLI CCNNNNNNNGG 1 cut(s) 93
BseMI GCAATG 1 cut(s) 1334
BseMII CTCAG 3 cut(s) 420, 488, 877
BseNI ACTGG 3 cut(s) 736, 924, 1129
BseRI GAGGAG 2 cut(s) 514, 1341
BseSI GKGCMC 2 cut(s) 308, 1370
BseXI GCAGC 1 cut(s) 1089
Bsh1236I CGCG 1 cut(s) 20
BshFI GGCC 1 cut(s) 306
BsiHKAI GWGCWC 1 cut(s) 1351
BsiSI CCGG 3 cut(s) 87, 369, 459
BslFI GGGAC 4 cut(s) 69, 478, 731, 1222
BslI CCNNNNNNNGG 1 cut(s) 93
BsmFI GGGAC 4 cut(s) 69, 478, 731, 1222
BsnI GGCC 1 cut(s) 306
Bsp119I TTCGAA 1 cut(s) 628
Bsp120I GGGCCC 1 cut(s) 304
Bsp1286I GDGCHC 3 cut(s) 308, 1351, 1370
Bsp13I TCCGGA 1 cut(s) 368
Bsp1407I TGTACA 1 cut(s) 996
Bsp143I GATC 8 cut(s) 63, 346, 709, 758, 1030, 1131, 1174, 1500
BspACI CCGC 3 cut(s) 20, 660, 1491
BspANI GGCC 1 cut(s) 306
BspCNI CTCAG 3 cut(s) 421, 489, 876
BspEI TCCGGA 1 cut(s) 368
BspFNI CGCG 1 cut(s) 20
BspLI GGNNCC 2 cut(s) 306, 1133
BspPI GGATC 4 cut(s) 717, 766, 1126, 1139
BspT104I TTCGAA 1 cut(s) 628
BsrDI GCAATG 1 cut(s) 1334
BsrGI TGTACA 1 cut(s) 996
BsrI ACTGG 3 cut(s) 736, 924, 1129
BssMI GATC 8 cut(s) 63, 346, 709, 758, 1030, 1131, 1174, 1500
Bst4CI ACNGT 3 cut(s) 74, 123, 795
BstAUI TGTACA 1 cut(s) 996
BstBI TTCGAA 1 cut(s) 628
BstC8I GCNNGC 1 cut(s) 963
BstDEI CTNAG 5 cut(s) 429, 497, 863, 1362, 1392
BstF5I GGATG 3 cut(s) 201, 767, 1402
BstFNI CGCG 1 cut(s) 20
BstKTI GATC 8 cut(s) 66, 349, 712, 761, 1033, 1134, 1177, 1503
BstMBI GATC 8 cut(s) 63, 346, 709, 758, 1030, 1131, 1174, 1500
BstMWI GCNNNNNNNGC 2 cut(s) 1482, 1491
BstPAI GACNNNNGTC 1 cut(s) 864
BstSCI CCNGG 2 cut(s) 85, 457
BstSFI CTRYAG 1 cut(s) 945
BstSLI GKGCMC 2 cut(s) 308, 1370
BstUI CGCG 1 cut(s) 20
BstV1I GCAGC 1 cut(s) 1089
BstV2I GAAGAC 1 cut(s) 117
BstX2I RGATCY 2 cut(s) 709, 1131
BstXI CCANNNNNNTGG 5 cut(s) 174, 233, 321, 809, 1324
BstYI RGATCY 2 cut(s) 709, 1131
Bsu36I CCTNAGG 1 cut(s) 497
BsuRI GGCC 1 cut(s) 306
BtsCI GGATG 3 cut(s) 201, 767, 1402
BtsIMutI CAGTG 2 cut(s) 814, 917
Cac8I GCNNGC 1 cut(s) 963
Cfr13I GGNCC 5 cut(s) 304, 305, 324, 371, 795
Csp6I GTAC 4 cut(s) 885, 997, 1095, 1457
CviAII CATG 3 cut(s) 534, 772, 895
CviQI GTAC 4 cut(s) 885, 997, 1095, 1457
DdeI CTNAG 5 cut(s) 429, 497, 863, 1362, 1392
DpnI GATC 8 cut(s) 65, 348, 711, 760, 1032, 1133, 1176, 1502
DpnII GATC 8 cut(s) 63, 346, 709, 758, 1030, 1131, 1174, 1500
DraI TTTAAA 1 cut(s) 903
DrdI GACNNNNNNGTC 1 cut(s) 1234
DseDI GACNNNNNNGTC 1 cut(s) 1234
Eco24I GRGCYC 1 cut(s) 308
Eco32I GATATC 1 cut(s) 189
Eco47I GGWCC 3 cut(s) 324, 371, 795
Eco57I CTGAAG 1 cut(s) 1392
Eco81I CCTNAGG 1 cut(s) 497
EcoO109I RGGNCCY 1 cut(s) 304
EcoRI GAATTC 2 cut(s) 521, 1275
EcoRV GATATC 1 cut(s) 189
EcoT38I GRGCYC 1 cut(s) 308
FaeI CATG 3 cut(s) 537, 775, 898
FalI AAGNNNNNCTT 2 cut(s) 1264, 1296
FaqI GGGAC 4 cut(s) 69, 478, 731, 1222
FatI CATG 3 cut(s) 533, 771, 894
Fnu4HI GCNGC 3 cut(s) 21, 1078, 1492
FokI GGATG 3 cut(s) 188, 754, 1409
FriOI GRGCYC 1 cut(s) 308
Fsp4HI GCNGC 3 cut(s) 21, 1078, 1492
FspBI CTAG 4 cut(s) 209, 563, 600, 693
GluI GCNGC 3 cut(s) 21, 1078, 1492
HaeIII GGCC 1 cut(s) 306
HapII CCGG 3 cut(s) 87, 369, 459
Hin1II CATG 3 cut(s) 537, 775, 898
HincII GTYRAC 1 cut(s) 729
HindII GTYRAC 1 cut(s) 729
HindIII AAGCTT 1 cut(s) 1213
HinfI GANTC 8 cut(s) 34, 158, 286, 433, 674, 929, 1006, 1114
HpaI GTTAAC 1 cut(s) 729
HpaII CCGG 3 cut(s) 87, 369, 459
HphI GGTGA 4 cut(s) 674, 833, 1067, 1433
Hpy166II GTNNAC 5 cut(s) 327, 729, 812, 925, 997
Hpy188I TCNGA 3 cut(s) 157, 430, 1011
Hpy188III TCNNGA 9 cut(s) 167, 344, 350, 369, 563, 1067, 1172, 1269, 1284
Hpy8I GTNNAC 5 cut(s) 327, 729, 812, 925, 997
HpyAV CCTTC 5 cut(s) 251, 536, 857, 1122, 1290
HpyCH4III ACNGT 3 cut(s) 74, 123, 795
HpyCH4IV ACGT 1 cut(s) 1097
HpyCH4V TGCA 7 cut(s) 184, 468, 533, 682, 834, 1257, 1400
HpyF10VI GCNNNNNNNGC 2 cut(s) 1482, 1491
HpyF3I CTNAG 5 cut(s) 429, 497, 863, 1362, 1392
HpySE526I ACGT 1 cut(s) 1097
Hsp92II CATG 3 cut(s) 537, 775, 898
Kpn2I TCCGGA 1 cut(s) 368
KspAI GTTAAC 1 cut(s) 729
Kzo9I GATC 8 cut(s) 63, 346, 709, 758, 1030, 1131, 1174, 1500
LmnI GCTCC 5 cut(s) 54, 475, 501, 1354, 1482
Lsp1109I GCAGC 1 cut(s) 1089
LweI GCATC 2 cut(s) 390, 1387
MaeI CTAG 4 cut(s) 209, 563, 600, 693
MaeII ACGT 1 cut(s) 1097
MaeIII GTNAC 3 cut(s) 572, 866, 1421
MalI GATC 8 cut(s) 65, 348, 711, 760, 1032, 1133, 1176, 1502
MboI GATC 8 cut(s) 63, 346, 709, 758, 1030, 1131, 1174, 1500
MboII GAAGA 7 cut(s) 117, 128, 183, 830, 1284, 1385, 1427
MfeI CAATTG 5 cut(s) 57, 296, 479, 827, 1118
MflI RGATCY 2 cut(s) 709, 1131
MhlI GDGCHC 3 cut(s) 308, 1351, 1370
MlyI GAGTC 2 cut(s) 295, 1000
MmeI TCCRAC 3 cut(s) 135, 229, 822
MroI TCCGGA 1 cut(s) 368
MroXI GAANNNNTTC 2 cut(s) 525, 1279
MseI TTAA 5 cut(s) 390, 617, 635, 728, 902
MslI CAYNNNNRTG 7 cut(s) 319, 441, 772, 807, 829, 1322, 1339
MspI CCGG 3 cut(s) 87, 369, 459
MspR9I CCNGG 2 cut(s) 87, 459
MunI CAATTG 5 cut(s) 57, 296, 479, 827, 1118
MvnI CGCG 1 cut(s) 20
MwoI GCNNNNNNNGC 2 cut(s) 1482, 1491
NciI CCSGG 2 cut(s) 87, 459
NdeII GATC 8 cut(s) 63, 346, 709, 758, 1030, 1131, 1174, 1500
NlaIII CATG 3 cut(s) 537, 775, 898
NlaIV GGNNCC 2 cut(s) 306, 1133
NmuCI GTSAC 2 cut(s) 866, 1421
NspV TTCGAA 1 cut(s) 628
OliI CACNNNNGTG 2 cut(s) 319, 829
PdmI GAANNNNTTC 2 cut(s) 525, 1279
PfeI GAWTC 6 cut(s) 34, 158, 433, 674, 929, 1114
PkrI GCNGC 3 cut(s) 22, 1079, 1493
PleI GAGTC 2 cut(s) 294, 1000
PpsI GAGTC 2 cut(s) 294, 1000
PshAI GACNNNNGTC 1 cut(s) 864
PspN4I GGNNCC 2 cut(s) 306, 1133
PspOMI GGGCCC 1 cut(s) 304
PspPI GGNCC 5 cut(s) 304, 305, 324, 371, 795
PsuI RGATCY 2 cut(s) 709, 1131
RsaI GTAC 4 cut(s) 886, 998, 1096, 1458
RsaNI GTAC 4 cut(s) 885, 997, 1095, 1457
RseI CAYNNNNRTG 7 cut(s) 319, 441, 772, 807, 829, 1322, 1339
SaqAI TTAA 5 cut(s) 390, 617, 635, 728, 902
SatI GCNGC 3 cut(s) 21, 1078, 1492
Sau3AI GATC 8 cut(s) 63, 346, 709, 758, 1030, 1131, 1174, 1500
Sau96I GGNCC 5 cut(s) 304, 305, 324, 371, 795
SchI GAGTC 2 cut(s) 295, 1000
ScrFI CCNGG 2 cut(s) 87, 459
SduI GDGCHC 3 cut(s) 308, 1351, 1370
SfaNI GCATC 2 cut(s) 390, 1387
SfcI CTRYAG 1 cut(s) 945
SfuI TTCGAA 1 cut(s) 628
SinI GGWCC 3 cut(s) 324, 371, 795
SmiMI CAYNNNNRTG 7 cut(s) 319, 441, 772, 807, 829, 1322, 1339
SmlI CTYRAG 1 cut(s) 1065
SmoI CTYRAG 1 cut(s) 1065
SsiI CCGC 3 cut(s) 20, 660, 1491
SspI AATATT 3 cut(s) 388, 595, 633
SspMI CTAG 4 cut(s) 209, 563, 600, 693
StyD4I CCNGG 2 cut(s) 85, 457
TaaI ACNGT 3 cut(s) 74, 123, 795
TaiI ACGT 1 cut(s) 1100
TaqI TCGA 1 cut(s) 628
TatI WGTACW 1 cut(s) 996
TauI GCSGC 2 cut(s) 23, 1494
TfiI GAWTC 6 cut(s) 34, 158, 433, 674, 929, 1114
Tru1I TTAA 5 cut(s) 390, 617, 635, 728, 902
Tru9I TTAA 5 cut(s) 390, 617, 635, 728, 902
TscAI CASTG 2 cut(s) 814, 924
TseFI GTSAC 2 cut(s) 866, 1421
TseI GCWGC 1 cut(s) 1077
Tsp45I GTSAC 2 cut(s) 866, 1421
TspDTI ATGAA 6 cut(s) 594, 756, 839, 1026, 1428, 1456
TspRI CASTG 2 cut(s) 814, 924
VpaK11BI GGWCC 3 cut(s) 324, 371, 795
XapI RAATTY 7 cut(s) 257, 271, 521, 763, 1203, 1246, 1275
XbaI TCTAGA 1 cut(s) 562
XcmI CCANNNNNNNNNTGG 1 cut(s) 315
XmnI GAANNNNTTC 2 cut(s) 525, 1279
XspI CTAG 4 cut(s) 209, 563, 600, 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.