RchiOBHm_Chr1g0315071

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
2299757 .. 2303019
3263 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54562

Sequence Viewer

Length: 3042 bp
ATGGATATCTATGTCTACTTTAACCCCATCTCTCGCCTCATTCTTCACTTCTTGCTCTTGTTATTTTTGGCATCTTCGTGCCTAAACAATAGTAGTGTCGTGGTGGAATCATGCATGGAGGAAGAGAGGCGAGCACTTCTCAGCTTTAAACAAGATCTCACTGATCCTTCTGGTAAGCTTTCTTCTTGGGCTGGTCACGAATGCTGCCAATGGACAGGGATTTCATGCAACAACCGCACTGGTCATGTTGCAACGGTTGACCTCCGTAATACATATCCAGACACCACTAGTGATGATCAGTGGAACACCACGGAGTATGAAGAATCTTGTTTGGGGGGTAAGTTAATTAATCCTTCTTTGCTTGGCTTGAAACATTTGAGTTACTTAGACTTGAGCTCGAATGATTTTCAAGGGACTCACATTCCCAAGTTTATTGGGGAGCTTACAAGTCTGAGATATCTCAATTTTTCAAGTTTCGACTATTTCAATTCATTTATTGGAGAGATTCCTTCTTCTCTTGGTAACCTCTCAAACTTAAACTATCTTGACCTCGGTTCTAGTTATTATCTTGACTATTCTCTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTAGAGGTGTGGACCTTAGCAGCAAAGGAGTTAGTTGGCTACATGAGGTTAACATGCTTCCTTCACTCTTAGAGCTATTGCATTTGTCTAGTTGCAAAATTGGTGGAAACCAGCTTCCACTCTCCAAGCCTACAATTAACTTCACATCACTTTTGGTCCTTGATATGTCAAGGAATAGTATTAATTTTTCATATCCTAAATGGATGTTTAATCTTACTAGCCTTACAAAAGTTGATCTGAGTGAGAATTTTGTCACTGGCCCCTTTCTTGATGAATTTGTAAGACTCAAATCTCTAGAACACCTTGACTTAGGGAGTGTAGGACTCAAAGGTCAATTTCCCAAATTTAGTGGAAATTTGTGCAAGCTCAAGTCATTAAGTCTTGCATCGAATCAAATTGATGGGGGGATTGAAGAGCTTTTGAGTGGTTTCTCAAATTGTTCATTTAATAGAATGGAGTCGCTAGATTTGCAAGACTGTGGGCTGGTAGGCAAATTGCCTAGTTCATTGGGAATGCTGAGAAGCCTGCAGCATCTCGATCTCAGCTACAACTCTTTTTGGGGATCCATTCCAGAATTTATTATCAGCAATTTATTATCATCCCTGCAGACACTTTATCTCATGGATAATATTTTCAACGGTTCCATTCCTCAAAGTTTGGGAAAACTTTCTCAGCTAGTGAGCCTTGATCTATCTTATAATGTTTTCAATGGTTCCATTCCTCAAAGTTTGGGAGAACTTTCTCAGCTAGTGAGCCTTGATCTATCTTATAATGTTTTCAATGGTTCCATTCCTCAAAGTTTGGGAAAACTTTCTCAGCTAGTGACCCTTGATCTATCTTATAATTCATGGGAAGGCAATTTAACCGAAACCCATTTCATAAATCTCACAAAATTAGTGTATTTTGCAGTTAGCACAGCCCAACCTATGCCCATCATTTTCAATTTGATTGATTATGAATGGATTCCTCCTTTCAAGCTCCACCAAATTGAAATGCACAACTGCCGACTAGGCCCCGGCTTCCCTGTATGGCTTCAATCTCAAACTGAGCTCGTGTCGGTCTCACTTGAGAATGCAGGACTCTCGGGTGCAATACCAGAGGAATGGGTCTTTAAGATATCTTCCCAGATCCAATCGTTGGATTTATCTTCCAATCAAATAAGCGGAAAGCTTCTGTTCCGATTCAACTCTTTTCTGAATCTGCGTTCCATAGTTTTGAGCCATAATCAATTTGATGGCCCTATTCCATCATCTATTTGTAGCATTCAATCTCTATATGAACTTGCTCTGAATAACAATCAGTTATCCGGAGAATTCCCTAAAGAATGGAGTTTGTGGAGCGACATAGACATTGTGGATGTCTCAAACAACAATATGTCTGGTAATATTCCAAGCTCAATGGGCATTCCAAGTTCTCTTGCAATACTAAAGATAGACAACAATCAATTTAGCGGAGAAATTCCTTCGGCCTTGCAAAATTGCTCACGTTTGCAGAGACTTTATCTTGGAGGCAACAAATTTACTGGAAGCATACCTTCTTGGATAGGATCAAAAGTATCCACATTCAAAGTGCTGCAATTGCAATCAAACTCTTTAAGTGGACATATTCCTCATCATTTGTGCAGTCTTCCTTTCCTTCAAATCCTAGACCTTAGTCACAATAGATTTTCAGGGACTATTCCCAACTGTTTGAATAAATTGACTTCTTTAATCTCTAGTAGTTATGGGGGCTGGAAGTACTCTGGTGATTTTGAGGTAATAACTGTGACTGTAAAAGGAAGAGCAAGTGAATACTTCTTACGCAACGAGGTGCTTCTAACCATTATTGATTTTTCGCATAATGATTTAGAAGGTGAAATTCCTGAAGAAATCATCAGTCTCGTTCAATTAGCTACATTAAACTTGTCCATTAATCAATTAAGTGGAAATATCCCCTCAAAAATTGGAAACTTGCACTTGCTTGAAACACTTGACCTCTCCCAGAACCAGCTTTCAGGACAGATTCCACAAAGTCTCGCTTCTCTGACCTTCTTATCTCACTTGAACTTGTCTTGCAACAACTTGACCGGAAGAATTCCTTCGGGCAACCAACTTCAGACGCTCGATGATTCATCTATTTATGAGGGCAATCCTTCACTCTGTGGATTTCCTCTTTCAAATTGCACAGAAGGTGGAGGCAACATGCATGAGCCTCATGAAGCTGATGATGAAAAGCTTGGTTTATATACCAGCGAGGTGCTTGGCTTTATCATAGGCTTTTGGAGTGTTTGTGGCACATTGATATTGAAGAAGTCATGGAGTAATTTTGGTAATAGCAGCAATGATTTAGCTGCTATGCTTTTCTTTTTTCACTTGTATGGTCAGTCTGAGTGTCCGTATTATCAATTTTGGTTTTGTTTTTGGTAG

Protein Analysis

1013

Amino Acids

112.64

Weight (kDa)

5.11

Isoelectric Point (pI)

39.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 77 1.2e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 360 - 565 1.3e-15 Leucine-rich repeat region
LRR_8 PF13855 413 - 470 5e-07 Leucine rich repeat
LRR_14 PF23598 827 - 918 4.4e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1335, 1407, 1479
AasI GACNNNNNNGTC 1 cut(s) 966
AccB7I CCANNNNNTGG 1 cut(s) 1774
AccI GTMKAC 1 cut(s) 15
AccIII TCCGGA 1 cut(s) 1943
AciI CCGC 3 cut(s) 235, 1800, 2088
AclWI GGATC 5 cut(s) 158, 1194, 1207, 1759, 2191
AcuI CTGAAG 2 cut(s) 2520, 2714
AdeI CACNNNGTG 1 cut(s) 2777
AfaI GTAC 1 cut(s) 2375
AfiI CCNNNNNNNGG 1 cut(s) 1774
AhlI ACTAGT 1 cut(s) 287
Alw21I GWGCWC 3 cut(s) 136, 398, 1689
Alw26I GTCTC 5 cut(s) 1702, 2002, 2125, 2519, 2654
AlwI GGATC 5 cut(s) 158, 1194, 1207, 1759, 2191
Ama87I CYCGRG 1 cut(s) 1720
Aor13HI TCCGGA 1 cut(s) 1943
AoxI GGCC 4 cut(s) 895, 1648, 1873, 2103
ApeKI GCWGC 6 cut(s) 204, 657, 1165, 2209, 2952, 2966
AseI ATTAAT 3 cut(s) 348, 819, 2547
Asp700I GAANNNNTTC 4 cut(s) 1303, 1447, 1599, 2713
AspS9I GGNCC 5 cut(s) 649, 793, 896, 1649, 1874
AsuC2I CCSGG 1 cut(s) 1653
AsuHPI GGTGA 2 cut(s) 2393, 2501
AvaI CYCGRG 1 cut(s) 1720
AvaII GGWCC 2 cut(s) 649, 793
BamHI GGATCC 1 cut(s) 1199
BanII GRGCYC 2 cut(s) 398, 1689
BarI GAAGNNNNNNTAC 2 cut(s) 166, 198
BauI CACGAG 1 cut(s) 1688
BbsI GAAGAC 1 cut(s) 2255
Bbv12I GWGCWC 3 cut(s) 136, 398, 1689
BbvI GCAGC 6 cut(s) 191, 669, 1177, 2196, 2953, 2964
BccI CCATC 5 cut(s) 35, 1031, 1577, 1865, 1891
BcgI CGANNNNNNTGC 2 cut(s) 1701, 1735
BciVI GTATCC 1 cut(s) 2203
BclI TGATCA 1 cut(s) 295
BcnI CCSGG 1 cut(s) 1653
BcoDI GTCTC 5 cut(s) 1702, 2002, 2125, 2519, 2654
BcuI ACTAGT 1 cut(s) 287
BfmI CTRYAG 2 cut(s) 1163, 1241
BfuI GTATCC 1 cut(s) 2203
BglI GCCNNNNNGGC 1 cut(s) 1647
BglII AGATCT 1 cut(s) 154
BisI GCNGC 6 cut(s) 205, 658, 1166, 2210, 2953, 2967
BlsI GCNGC 6 cut(s) 206, 659, 1167, 2211, 2954, 2968
BmcAI AGTACT 1 cut(s) 2375
Bme1390I CCNGG 1 cut(s) 1653
Bme18I GGWCC 2 cut(s) 649, 793
BmeT110I CYCGRG 1 cut(s) 1720
BmgT120I GGNCC 5 cut(s) 649, 793, 896, 1649, 1874
BmiI GGNNCC 6 cut(s) 898, 1201, 1279, 1351, 1423, 1651
BmrFI CCNGG 1 cut(s) 1653
BmsI GCATC 3 cut(s) 80, 1031, 1177
BoxI GACNNNNGTC 1 cut(s) 2289
BpiI GAAGAC 1 cut(s) 2255
BplI GAGNNNNNCTC 2 cut(s) 123, 155
Bpu10I CCTNAGC 1 cut(s) 653
BpuEI CTTGAG 3 cut(s) 412, 989, 1724
BpuMI CCSGG 1 cut(s) 1653
BsaI GGTCTC 1 cut(s) 1702
BsaJI CCNNGG 3 cut(s) 309, 550, 1651
BsaWI WCCGGW 2 cut(s) 1943, 2702
BsaXI ACNNNNNCTCC 2 cut(s) 2890, 2920
Bsc4I CCNNNNNNNGG 1 cut(s) 1774
Bse1I ACTGG 3 cut(s) 244, 898, 2164
Bse3DI GCAATG 1 cut(s) 2962
BseAI TCCGGA 1 cut(s) 1943
BseDI CCNNGG 3 cut(s) 309, 550, 1651
BseGI GGATG 3 cut(s) 846, 1235, 1999
BseLI CCNNNNNNNGG 1 cut(s) 1774
BseMI GCAATG 1 cut(s) 2962
BseNI ACTGG 3 cut(s) 244, 898, 2164
BseXI GCAGC 6 cut(s) 191, 669, 1177, 2196, 2953, 2964
BsgI GTGCAG 1 cut(s) 2278
BshFI GGCC 4 cut(s) 897, 1650, 1875, 2105
BsiHKAI GWGCWC 3 cut(s) 136, 398, 1689
BsiHKCI CYCGRG 1 cut(s) 1720
BsiSI CCGG 3 cut(s) 1653, 1944, 2703
BslFI GGGAC 2 cut(s) 427, 2323
BslI CCNNNNNNNGG 1 cut(s) 1774
BsmAI GTCTC 5 cut(s) 1702, 2002, 2125, 2519, 2654
BsmFI GGGAC 2 cut(s) 427, 2323
BsmI GAATGC 5 cut(s) 206, 1155, 1714, 1899, 2040
BsnI GGCC 4 cut(s) 897, 1650, 1875, 2105
Bso31I GGTCTC 1 cut(s) 1702
BsoBI CYCGRG 1 cut(s) 1720
Bsp1286I GDGCHC 3 cut(s) 136, 398, 1689
Bsp13I TCCGGA 1 cut(s) 1943
BspACI CCGC 3 cut(s) 235, 1800, 2088
BspANI GGCC 4 cut(s) 897, 1650, 1875, 2105
BspEI TCCGGA 1 cut(s) 1943
BspHI TCATGA 1 cut(s) 2830
BspLI GGNNCC 6 cut(s) 898, 1201, 1279, 1351, 1423, 1651
BspMAI CTGCAG 2 cut(s) 1167, 1245
BspPI GGATC 5 cut(s) 158, 1194, 1207, 1759, 2191
BspQI GCTCTTC 2 cut(s) 1044, 2410
BspTNI GGTCTC 1 cut(s) 1702
BsrDI GCAATG 1 cut(s) 2962
BsrI ACTGG 3 cut(s) 244, 898, 2164
BssECI CCNNGG 3 cut(s) 309, 550, 1651
BssSI CACGAG 1 cut(s) 1688
Bst2BI CACGAG 1 cut(s) 1688
Bst4CI ACNGT 6 cut(s) 256, 1115, 1277, 2324, 2401, 2407
Bst6I CTCTTC 4 cut(s) 117, 622, 1044, 2410
BstC8I GCNNGC 3 cut(s) 132, 1001, 1163
BstDSI CCRYGG 1 cut(s) 309
BstEII GGTNACC 1 cut(s) 521
BstF5I GGATG 3 cut(s) 846, 1235, 1999
BstMAI GTCTC 5 cut(s) 1702, 2002, 2125, 2519, 2654
BstMWI GCNNNNNNNGC 5 cut(s) 234, 1105, 1647, 2037, 2215
BstNSI RCATGY 2 cut(s) 694, 2821
BstPAI GACNNNNGTC 1 cut(s) 2289
BstPI GGTNACC 1 cut(s) 521
BstSCI CCNGG 1 cut(s) 1651
BstSFI CTRYAG 2 cut(s) 1163, 1241
BstV1I GCAGC 6 cut(s) 191, 669, 1177, 2196, 2953, 2964
BstV2I GAAGAC 1 cut(s) 2255
BstX2I RGATCY 3 cut(s) 154, 1199, 1764
BstXI CCANNNNNNTGG 1 cut(s) 1740
BstYI RGATCY 3 cut(s) 154, 1199, 1764
BsuI GTATCC 1 cut(s) 2203
BsuRI GGCC 4 cut(s) 897, 1650, 1875, 2105
BtgI CCRYGG 1 cut(s) 309
BtsCI GGATG 3 cut(s) 846, 1235, 1999
BtsIMutI CAGTG 4 cut(s) 159, 237, 305, 891
Cac8I GCNNGC 3 cut(s) 132, 1001, 1163
CciI TCATGA 1 cut(s) 2830
Cfr13I GGNCC 5 cut(s) 649, 793, 896, 1649, 1874
CseI GACGC 1 cut(s) 2743
Csp6I GTAC 1 cut(s) 2374
CspCI CAANNNNNGTGG 4 cut(s) 721, 756, 967, 1002
CviQI GTAC 1 cut(s) 2374
DraI TTTAAA 1 cut(s) 148
DraIII CACNNNGTG 1 cut(s) 2777
DrdI GACNNNNNNGTC 1 cut(s) 966
DseDI GACNNNNNNGTC 1 cut(s) 966
Eam1104I CTCTTC 4 cut(s) 117, 622, 1044, 2410
EarI CTCTTC 4 cut(s) 117, 622, 1044, 2410
Ecl136II GAGCTC 2 cut(s) 396, 1687
Eco24I GRGCYC 2 cut(s) 398, 1689
Eco31I GGTCTC 1 cut(s) 1702
Eco32I GATATC 3 cut(s) 7, 458, 1755
Eco47I GGWCC 2 cut(s) 649, 793
Eco53kI GAGCTC 2 cut(s) 396, 1687
Eco57I CTGAAG 2 cut(s) 2520, 2714
Eco88I CYCGRG 1 cut(s) 1720
Eco91I GGTNACC 1 cut(s) 521
EcoICRI GAGCTC 2 cut(s) 396, 1687
EcoO109I RGGNCCY 1 cut(s) 1649
EcoO65I GGTNACC 1 cut(s) 521
EcoRI GAATTC 2 cut(s) 1949, 2709
EcoRV GATATC 3 cut(s) 7, 458, 1755
EcoT22I ATGCAT 2 cut(s) 116, 2823
EcoT38I GRGCYC 2 cut(s) 398, 1689
FalI AAGNNNNNCTT 6 cut(s) 2155, 2187, 2638, 2670, 2698, 2730
FaqI GGGAC 2 cut(s) 427, 2323
FbaI TGATCA 1 cut(s) 295
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 6 cut(s) 205, 658, 1166, 2210, 2953, 2967
FokI GGATG 3 cut(s) 853, 1222, 2006
FriOI GRGCYC 2 cut(s) 398, 1689
Fsp4HI GCNGC 6 cut(s) 205, 658, 1166, 2210, 2953, 2967
GluI GCNGC 6 cut(s) 205, 658, 1166, 2210, 2953, 2967
HaeIII GGCC 4 cut(s) 897, 1650, 1875, 2105
HapII CCGG 3 cut(s) 1653, 1944, 2703
HgaI GACGC 1 cut(s) 2743
HincII GTYRAC 2 cut(s) 259, 688
HindII GTYRAC 2 cut(s) 259, 688
HindIII AAGCTT 3 cut(s) 176, 1805, 2849
HpaI GTTAAC 1 cut(s) 688
HpaII CCGG 3 cut(s) 1653, 1944, 2703
HphI GGTGA 2 cut(s) 2393, 2501
Hpy166II GTNNAC 5 cut(s) 16, 259, 649, 688, 2237
Hpy188I TCNGA 8 cut(s) 453, 876, 1817, 1833, 1926, 2661, 2733, 3004
Hpy8I GTNNAC 5 cut(s) 16, 259, 649, 688, 2237
HpyCH4III ACNGT 6 cut(s) 256, 1115, 1277, 2324, 2401, 2407
HpyCH4IV ACGT 1 cut(s) 2122
HpyF10VI GCNNNNNNNGC 5 cut(s) 234, 1105, 1647, 2037, 2215
HpySE526I ACGT 1 cut(s) 2122
Kpn2I TCCGGA 1 cut(s) 1943
Ksp22I TGATCA 1 cut(s) 295
KspAI GTTAAC 1 cut(s) 688
LguI GCTCTTC 2 cut(s) 1044, 2410
LmnI GCTCC 3 cut(s) 439, 1620, 1974
Lsp1109I GCAGC 6 cut(s) 191, 669, 1177, 2196, 2953, 2964
LweI GCATC 3 cut(s) 80, 1031, 1177
MaeII ACGT 1 cut(s) 2122
MaeIII GTNAC 7 cut(s) 194, 380, 521, 889, 1459, 2291, 2401
MfeI CAATTG 1 cut(s) 2213
MflI RGATCY 3 cut(s) 154, 1199, 1764
MhlI GDGCHC 3 cut(s) 136, 398, 1689
MlyI GAGTC 5 cut(s) 409, 915, 954, 1103, 1710
MmeI TCCRAC 1 cut(s) 1755
Mph1103I ATGCAT 2 cut(s) 116, 2823
MroI TCCGGA 1 cut(s) 1943
MroXI GAANNNNTTC 4 cut(s) 1303, 1447, 1599, 2713
MslI CAYNNNNRTG 2 cut(s) 76, 2991
MspI CCGG 3 cut(s) 1653, 1944, 2703
MspR9I CCNGG 1 cut(s) 1653
MunI CAATTG 1 cut(s) 2213
Mva1269I GAATGC 5 cut(s) 206, 1155, 1714, 1899, 2040
MwoI GCNNNNNNNGC 5 cut(s) 234, 1105, 1647, 2037, 2215
NciI CCSGG 1 cut(s) 1653
NlaIV GGNNCC 6 cut(s) 898, 1201, 1279, 1351, 1423, 1651
NmuCI GTSAC 5 cut(s) 194, 889, 1459, 2291, 2401
NsiI ATGCAT 2 cut(s) 116, 2823
NspI RCATGY 2 cut(s) 694, 2821
PacI TTAATTAA 1 cut(s) 348
PagI TCATGA 1 cut(s) 2830
PciSI GCTCTTC 2 cut(s) 1044, 2410
PctI GAATGC 5 cut(s) 206, 1155, 1714, 1899, 2040
PdmI GAANNNNTTC 4 cut(s) 1303, 1447, 1599, 2713
PfeI GAWTC 9 cut(s) 107, 323, 505, 1027, 1600, 1818, 1834, 2638, 2744
PflMI CCANNNNNTGG 1 cut(s) 1774
PkrI GCNGC 6 cut(s) 206, 659, 1167, 2211, 2954, 2968
PleI GAGTC 5 cut(s) 409, 915, 954, 1102, 1710
PpsI GAGTC 5 cut(s) 409, 915, 954, 1102, 1710
PshAI GACNNNNGTC 1 cut(s) 2289
PshBI ATTAAT 3 cut(s) 348, 819, 2547
PsiI TTATAA 3 cut(s) 1335, 1407, 1479
Psp124BI GAGCTC 2 cut(s) 398, 1689
PspEI GGTNACC 1 cut(s) 521
PspN4I GGNNCC 6 cut(s) 898, 1201, 1279, 1351, 1423, 1651
PspPI GGNCC 5 cut(s) 649, 793, 896, 1649, 1874
PstI CTGCAG 2 cut(s) 1167, 1245
PsuI RGATCY 3 cut(s) 154, 1199, 1764
RsaI GTAC 1 cut(s) 2375
RsaNI GTAC 1 cut(s) 2374
RseI CAYNNNNRTG 2 cut(s) 76, 2991
SacI GAGCTC 2 cut(s) 398, 1689
SapI GCTCTTC 2 cut(s) 1044, 2410
SatI GCNGC 6 cut(s) 205, 658, 1166, 2210, 2953, 2967
Sau96I GGNCC 5 cut(s) 649, 793, 896, 1649, 1874
ScaI AGTACT 1 cut(s) 2375
SchI GAGTC 5 cut(s) 409, 915, 954, 1103, 1710
ScrFI CCNGG 1 cut(s) 1653
SduI GDGCHC 3 cut(s) 136, 398, 1689
SfaNI GCATC 3 cut(s) 80, 1031, 1177
SfcI CTRYAG 2 cut(s) 1163, 1241
SinI GGWCC 2 cut(s) 649, 793
SmiMI CAYNNNNRTG 2 cut(s) 76, 2991
SmlI CTYRAG 3 cut(s) 391, 1004, 1703
SmoI CTYRAG 3 cut(s) 391, 1004, 1703
SpeI ACTAGT 1 cut(s) 287
SsiI CCGC 3 cut(s) 235, 1800, 2088
SspI AATATT 2 cut(s) 1267, 2023
SstI GAGCTC 2 cut(s) 398, 1689
StyD4I CCNGG 1 cut(s) 1651
TaaI ACNGT 6 cut(s) 256, 1115, 1277, 2324, 2401, 2407
TaiI ACGT 1 cut(s) 2125
TaqI TCGA 5 cut(s) 398, 477, 1025, 1173, 2739
TaqII GACCGA 1 cut(s) 1684
TatI WGTACW 1 cut(s) 2373
TfiI GAWTC 9 cut(s) 107, 323, 505, 1027, 1600, 1818, 1834, 2638, 2744
TscAI CASTG 4 cut(s) 166, 244, 305, 898
TseFI GTSAC 5 cut(s) 194, 889, 1459, 2291, 2401
TseI GCWGC 6 cut(s) 204, 657, 1165, 2209, 2952, 2966
Tsp45I GTSAC 5 cut(s) 194, 889, 1459, 2291, 2401
TspGWI ACGGA 3 cut(s) 254, 326, 3000
TspRI CASTG 4 cut(s) 166, 244, 305, 898
Van91I CCANNNNNTGG 1 cut(s) 1774
VpaK11BI GGWCC 2 cut(s) 649, 793
VspI ATTAAT 3 cut(s) 348, 819, 2547
XbaI TCTAGA 1 cut(s) 931
XceI RCATGY 2 cut(s) 694, 2821
XmiI GTMKAC 1 cut(s) 15
XmnI GAANNNNTTC 4 cut(s) 1303, 1447, 1599, 2713
ZrmI AGTACT 1 cut(s) 2375
Zsp2I ATGCAT 2 cut(s) 116, 2823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.