Rh6DG187900

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
33436377 .. 33440440
4064 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG187900.1

Sequence Viewer

Length: 2991 bp
ATGGATAGTTCTGCAAACTTTCCCAACCCTGTCTATCATTTCAATATTGCTCTCTGTTTCCTCTTGTTTTTAGCCTCTTCATGCCTAAACACTAGTAAACTCTGCTTGGGAGATGGCCTTCCAGTTGTGAAATGCATTGACATAGAGAGAAGCGCGCTTCTCATCTTTAAGGCAGATCTTATCGATGCTTCGGGTAGGCTATCATCTTGGGAGGGTCAAAATTGTTGTCAATGGAAAGGGATTTCATGCAACAACCGCACTGGTCATGTTGAAAAGATGGACCTCCGCAATACAAGTCCAGCTCCATCTATTGATGTTGAAGACCAGGAGTTTGAGGCTTATGAAGAGTCCTTTTTGGGGGGTAAGATAAATCCTTCTTTACTTCGCTTGAAATATATGAGTTACTTAGACTTAAGCTCGAATGACTTTCAAGGGCTTCAAATTCCTAAGTTCTTTGGTCAGCTTAAAAGTCTGAAGTATCTCAATGTCTCATCTGCATATTCATCTTCATCTTTATCTTCATCTTTTGGGGGACAGATTCCACCTCATCTTGGTAACCTATCAAACTTGAACTATCTTGACCTCAGTGGTAACTATTTACTAGAAATTTCTTCCATAAATTTGAATTGGCTTTCTCATCTCTCCTCTCTAAAATACCTCAGTCTAAATGAAGTGGACCTTAGCAATGCAGGAGCCACTTGGCTACATGTTGTTAACATTCTTCCTTCCATGCTAGAGTTACACTTGTCTAGATGCAACATTGAAAGCCTTCCACTTTCACTTCACACCATGAACCTCACATCACTTTTGATCCTTGATATGTCATTGAATGATTTTAAGTTTCCATTTCCAAAGTGGGTCTTTAATCTAACTAGCCTCAGAGAACTTCACTTGGCCACGAATTCTTTCAGCGGTCCCCTTCCCAATGATTTCGTTAACCTGAAATCATTGGAAGAACTTGATTTATCTCTTAATGGCCTTCACGGTCGAATTCCCAAATTCTTTGAAAATCTCTGCAACCTAAAGACCTTAATTCTTTCGGAAAACGCATTTGATCAGGGTCTTCCAGAGTTTTTGGATGGTTTATCAGGTTGTGCAAATAATAAGTTGGAGTCACTAGACTTGTCTAGTAATAAGCTGGTAGGCGAATTGCCTGCCTCCTTAGGGATGCTCCCCCATTTGCAGTACCTTAACCTCTTCCACAATCATTTGAATGGATCCATCCCAGAAAGTTTGGGACGACTCTCTGAGCTAGTTCATCTAGACCTGTCGGAAAACTCATTGGTAGGCTTTTTAACTGAAGCCCATTTCATAGATCTCGCAAAGTTAAAATACATTGCGCTGGGCAATATCAGTGTCCCCAACTCGCTACCTTCCATCATTTTCAATGTGTCTTATGAGTGGGTTCCTCCTTTCAAGCTTGACACCATTGCCATCAGGAACTGTCAAGTAGGTCCTGCCTTTTCACTATGGCTTCAATCTCAAACTGAACCAGTATATGTCACTCTAAGCAATACAGGCATCTCGGATTCCATACCAGAGGAATGGTTCGTGAAAATATCTTCCGGCCAACTCCAATTTTTGGATTTATCTTTCAACGAAATTCGTGGAAAGCTTCCAGTCCAATTGATAGTTCCAAATTTAGTGGGTCTAGATTTGAGACATAATCAATTCCGCGGCTCACTCCCGCTTTGGTTGTGTAAGGAGGCTTCCTACCTAAATCTTGCTAGCAATTCATTTTCCGGGCCAGTTCCGTCAACTTTTGACCAACATTTTCCAAAATTGCGAGAACTGCATCTCTATGAAAATTATTTGAATGGCACGATTCCATCCTCTGTTTGCAACATGCAGAAGATGTTAATCTTTTCTCTAAGAAGCAACAACATTTCCGGAGAATTTCCTCAAGCATGGAGTACGTGGGGTGACATATACATTATAGATGTTGGAGACAATCATCTCTCAGGAAATATTCCCAGTTCAATGGGTATCCCAAGTTCACTTTTTTTGTTGTCGATGAAGAACAACAAATTAGATGGTGAAATCCCGATGGCCTTGGGAAATAGCACCAACCTAAGGAGTATTGATCTTGGTGGTAATAGATTTACTGGAAACCTTCCTTCATGGATAGGAACAAATGTATCCAAGGTGTTTATCTTACGTCTGCCATCCAATTCTCTAAGTGGACATATTCCCCAGCAATTGTGCAATCTTGACCAACTTCACCTCCTAGATCTTGGTCATAACCACCTCTCAGGTACTATACCAACGTGTTTGAATAATATGACTGCTCTAACAGATGTCAAGTTCAATGCTTATGACTTATATCATGCGTATGAACAACAAATAATGGTGACCAGGGGAAGAGAATTCCAATATAACAAGACTCTGAAGTGGGTAAAAAGTATAGATCTTTCCTCAAATAGTTTGGAAGGTGAAATCCCTGAAAAAATCTGCAGTCTCTTTGCATTGGTTATCTTGAACTTGTCGATGAATCATCTAAGTGGAAACATTCCCTCGAAAATTGGAAACTTGCGGTCGCTCGAATTCCTTGATCTCTCAGGCAACCACCTTTCGGGACGAATTCCTCAAAGTATTTCATCTTTAACCTATTTGTCTCACTTGAATTTGTCTTACAACGAATTGAGCGGAAGAATTCCTTTGGGCAACCAACTTCAAGCACTTGATGATTCAACCAATATTTATAGGGGCAATCCATCACTTTGTGGGGTTCCCCTTTTAAACAAGTGCCCAGGAGATGACAGACCTCCACAACCCACTTTTCCTCGTGGGAAAAGACATGAAGATGATGAAAAGCTTGGTTTCTACATCAGCGCAGTGCTCGGCTTTGTCGTAGGCTTTTGGGGTGTTTGTGGCACATTACTCATAAAGAAGTCATGGAGGTATGCCTACTTTCGATTTTTTGATCGCATCCAAGACAAGGTAGCAGTGGCAGTTGCATTGAAAATAGCCCATTTCCAGAGGAAGATTTAA

Protein Analysis

996

Amino Acids

110.93

Weight (kDa)

6.06

Isoelectric Point (pI)

39.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 49 - 84 3.9e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 181 - 445 2.3e-15 Leucine-rich repeat region
LRR_14 PF23598 807 - 880 3.2e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1582
AccBSI CCGCTC 1 cut(s) 2646
AccII CGCG 2 cut(s) 155, 1677
AccIII TCCGGA 1 cut(s) 1889
AciI CCGC 8 cut(s) 256, 286, 912, 1675, 1677, 1688, 2533, 2646
AclWI GGATC 3 cut(s) 805, 1212, 1225
AcoI YGGCCR 2 cut(s) 894, 1567
AcuI CTGAAG 3 cut(s) 494, 1320, 2408
AdeI CACNNNGTG 1 cut(s) 2723
AfaI GTAC 3 cut(s) 1187, 1915, 2257
AfiI CCNNNNNNNGG 7 cut(s) 357, 551, 1164, 1582, 2073, 2572, 2938
AflII CTTAAG 1 cut(s) 412
AflIII ACRYGT 2 cut(s) 706, 2267
AhlI ACTAGT 1 cut(s) 92
AjnI CCWGG 3 cut(s) 324, 2354, 2749
AjuI GAANNNNNNNTTGG 2 cut(s) 1617, 1649
AluBI AGCT 8 cut(s) 302, 417, 463, 1138, 1252, 1420, 1615, 2815
AluI AGCT 8 cut(s) 302, 417, 463, 1138, 1252, 1420, 1615, 2815
Alw21I GWGCWC 1 cut(s) 2841
Alw26I GTCTC 5 cut(s) 493, 1654, 1941, 2462, 2619
AlwI GGATC 3 cut(s) 805, 1212, 1225
AlwNI CAGNNNCTG 1 cut(s) 1443
Aor13HI TCCGGA 1 cut(s) 1889
AoxI GGCC 6 cut(s) 115, 894, 976, 1567, 1745, 2049
ArsI GACNNNNNNTTYG 4 cut(s) 211, 243, 314, 346
Asp700I GAANNNNTTC 2 cut(s) 768, 905
AspLEI GCGC 4 cut(s) 155, 157, 1342, 2834
AspS9I GGNCC 5 cut(s) 280, 676, 914, 1454, 1745
AsuC2I CCSGG 1 cut(s) 1744
AsuHPI GGTGA 5 cut(s) 1934, 2048, 2213, 2362, 2444
AsuNHI GCTAGC 1 cut(s) 1727
AvaII GGWCC 4 cut(s) 280, 676, 914, 1454
AxyI CCTNAGG 2 cut(s) 1162, 2072
BaeGI GKGCMC 1 cut(s) 2750
BaeI ACNNNNGTAYC 2 cut(s) 2121, 2154
BalI TGGCCA 1 cut(s) 896
BamHI GGATCC 1 cut(s) 1217
BarI GAAGNNNNNNTAC 2 cut(s) 1693, 1725
BauI CACGAG 1 cut(s) 2784
BbsI GAAGAC 2 cut(s) 327, 1055
Bbv12I GWGCWC 1 cut(s) 2841
BcgI CGANNNNNNTGC 2 cut(s) 1136, 1170
BciT130I CCWGG 3 cut(s) 326, 2356, 2751
BciVI GTATCC 2 cut(s) 1997, 2149
BclI TGATCA 1 cut(s) 1054
BcnI CCSGG 1 cut(s) 1744
BcoDI GTCTC 5 cut(s) 493, 1654, 1941, 2462, 2619
BcuI ACTAGT 1 cut(s) 92
BfmI CTRYAG 1 cut(s) 2452
BfrI CTTAAG 1 cut(s) 412
BfuI GTATCC 2 cut(s) 1997, 2149
BglII AGATCT 4 cut(s) 175, 1315, 2230, 2407
BisI GCNGC 1 cut(s) 1678
BlsI GCNGC 1 cut(s) 1679
Bme1390I CCNGG 4 cut(s) 326, 1744, 2356, 2751
Bme18I GGWCC 4 cut(s) 280, 676, 914, 1454
BmgT120I GGNCC 5 cut(s) 280, 676, 914, 1454, 1745
BmiI GGNNCC 5 cut(s) 694, 916, 1219, 1407, 2730
BmrFI CCNGG 4 cut(s) 326, 1744, 2356, 2751
BmrI ACTGGG 1 cut(s) 1968
BmsI GCATC 6 cut(s) 175, 743, 1158, 1530, 1804, 2937
BmtI GCTAGC 1 cut(s) 1731
BmuI ACTGGG 1 cut(s) 1968
BpiI GAAGAC 2 cut(s) 327, 1055
Bpu10I CCTNAGC 1 cut(s) 680
BpuEI CTTGAG 1 cut(s) 1887
BpuMI CCSGG 1 cut(s) 1744
Bsa29I ATCGAT 1 cut(s) 183
BsaAI YACGTR 1 cut(s) 1917
BsaBI GATNNNNATC 1 cut(s) 1859
BsaJI CCNNGG 5 cut(s) 1675, 2052, 2142, 2355, 2749
BsaWI WCCGGW 1 cut(s) 1889
BsaXI ACNNNNNCTCC 2 cut(s) 2208, 2238
Bsc4I CCNNNNNNNGG 7 cut(s) 357, 551, 1164, 1582, 2073, 2572, 2938
Bse1I ACTGG 7 cut(s) 122, 265, 1493, 1619, 1748, 1974, 2110
Bse21I CCTNAGG 2 cut(s) 1162, 2072
Bse3DI GCAATG 3 cut(s) 691, 1335, 1428
Bse8I GATNNNNATC 1 cut(s) 1859
BseAI TCCGGA 1 cut(s) 1889
BseBI CCWGG 3 cut(s) 326, 2356, 2751
BseCI ATCGAT 1 cut(s) 183
BseDI CCNNGG 5 cut(s) 1675, 2052, 2142, 2355, 2749
BseGI GGATG 6 cut(s) 1084, 1173, 1221, 1829, 2165, 2928
BseJI GATNNNNATC 1 cut(s) 1859
BseLI CCNNNNNNNGG 7 cut(s) 357, 551, 1164, 1582, 2073, 2572, 2938
BseMI GCAATG 3 cut(s) 691, 1335, 1428
BseMII CTCAG 7 cut(s) 598, 673, 892, 1239, 1974, 2265, 2571
BseNI ACTGG 7 cut(s) 122, 265, 1493, 1619, 1748, 1974, 2110
BsePI GCGCGC 1 cut(s) 153
BseRI GAGGAG 1 cut(s) 634
BseSI GKGCMC 1 cut(s) 2750
BseYI CCCAGC 2 cut(s) 1342, 2193
Bsh1236I CGCG 2 cut(s) 155, 1677
Bsh1285I CGRYCG 2 cut(s) 988, 2537
BshFI GGCC 6 cut(s) 117, 896, 978, 1569, 1747, 2051
BshVI ATCGAT 1 cut(s) 183
BsiEI CGRYCG 2 cut(s) 988, 2537
BsiHKAI GWGCWC 1 cut(s) 2841
BsiSI CCGG 3 cut(s) 1566, 1743, 1890
BslFI GGGAC 5 cut(s) 546, 900, 1251, 1343, 2589
BslI CCNNNNNNNGG 7 cut(s) 357, 551, 1164, 1582, 2073, 2572, 2938
BsmAI GTCTC 5 cut(s) 493, 1654, 1941, 2462, 2619
BsmFI GGGAC 5 cut(s) 546, 900, 1251, 1343, 2589
BsnI GGCC 6 cut(s) 117, 896, 978, 1569, 1747, 2051
Bsp1286I GDGCHC 2 cut(s) 2750, 2841
Bsp13I TCCGGA 1 cut(s) 1889
BspACI CCGC 8 cut(s) 256, 286, 912, 1675, 1677, 1688, 2533, 2646
BspANI GGCC 6 cut(s) 117, 896, 978, 1569, 1747, 2051
BspCNI CTCAG 7 cut(s) 597, 672, 891, 1240, 1973, 2264, 2570
BspDI ATCGAT 1 cut(s) 183
BspEI TCCGGA 1 cut(s) 1889
BspFNI CGCG 2 cut(s) 155, 1677
BspLI GGNNCC 5 cut(s) 694, 916, 1219, 1407, 2730
BspMAI CTGCAG 1 cut(s) 2456
BspOI GCTAGC 1 cut(s) 1731
BspPI GGATC 3 cut(s) 805, 1212, 1225
BspTI CTTAAG 1 cut(s) 412
BsrBI CCGCTC 1 cut(s) 2646
BsrDI GCAATG 3 cut(s) 691, 1335, 1428
BsrI ACTGG 7 cut(s) 122, 265, 1493, 1619, 1748, 1974, 2110
BssECI CCNNGG 5 cut(s) 1675, 2052, 2142, 2355, 2749
BssHII GCGCGC 1 cut(s) 153
BssSI CACGAG 1 cut(s) 2784
BssT1I CCWWGG 2 cut(s) 2052, 2142
Bst2BI CACGAG 1 cut(s) 2784
Bst2UI CCWGG 3 cut(s) 326, 2356, 2751
Bst4CI ACNGT 2 cut(s) 986, 1445
Bst6I CTCTTC 4 cut(s) 82, 339, 1202, 2356
BstAFI CTTAAG 1 cut(s) 412
BstBAI YACGTR 1 cut(s) 1917
BstC8I GCNNGC 3 cut(s) 155, 1155, 1729
BstDSI CCRYGG 1 cut(s) 1675
BstEII GGTNACC 2 cut(s) 554, 2350
BstF5I GGATG 6 cut(s) 1084, 1173, 1221, 1829, 2165, 2928
BstFNI CGCG 2 cut(s) 155, 1677
BstHHI GCGC 4 cut(s) 155, 157, 1342, 2834
BstMAI GTCTC 5 cut(s) 493, 1654, 1941, 2462, 2619
BstMCI CGRYCG 2 cut(s) 988, 2537
BstMWI GCNNNNNNNGC 3 cut(s) 255, 1518, 1792
BstNI CCWGG 3 cut(s) 326, 2356, 2751
BstNSI RCATGY 2 cut(s) 710, 1849
BstPI GGTNACC 2 cut(s) 554, 2350
BstSCI CCNGG 4 cut(s) 324, 1742, 2354, 2749
BstSFI CTRYAG 1 cut(s) 2452
BstSLI GKGCMC 1 cut(s) 2750
BstUI CGCG 2 cut(s) 155, 1677
BstV2I GAAGAC 2 cut(s) 327, 1055
BstX2I RGATCY 5 cut(s) 175, 1217, 1315, 2230, 2407
BstXI CCANNNNNNTGG 2 cut(s) 1545, 1981
BstYI RGATCY 5 cut(s) 175, 1217, 1315, 2230, 2407
Bsu15I ATCGAT 1 cut(s) 183
Bsu36I CCTNAGG 2 cut(s) 1162, 2072
BsuI GTATCC 2 cut(s) 1997, 2149
BsuRI GGCC 6 cut(s) 117, 896, 978, 1569, 1747, 2051
BsuTUI ATCGAT 1 cut(s) 183
BtgI CCRYGG 1 cut(s) 1675
BtsCI GGATG 6 cut(s) 1084, 1173, 1221, 1829, 2165, 2928
BtsI GCAGTG 2 cut(s) 2841, 2952
BtsIMutI CAGTG 5 cut(s) 258, 592, 1360, 2841, 2952
Cac8I GCNNGC 3 cut(s) 155, 1155, 1729
CaiI CAGNNNCTG 1 cut(s) 1443
CfoI GCGC 4 cut(s) 155, 157, 1342, 2834
Cfr13I GGNCC 5 cut(s) 280, 676, 914, 1454, 1745
Cfr42I CCGCGG 1 cut(s) 1678
ClaI ATCGAT 1 cut(s) 183
Csp6I GTAC 3 cut(s) 1186, 1914, 2256
CspCI CAANNNNNGTGG 2 cut(s) 1626, 1661
CviQI GTAC 3 cut(s) 1186, 1914, 2256
DraI TTTAAA 1 cut(s) 2739
DraIII CACNNNGTG 1 cut(s) 2723
EaeI YGGCCR 2 cut(s) 894, 1567
Eam1104I CTCTTC 4 cut(s) 82, 339, 1202, 2356
EarI CTCTTC 4 cut(s) 82, 339, 1202, 2356
Eco130I CCWWGG 2 cut(s) 2052, 2142
Eco47I GGWCC 4 cut(s) 280, 676, 914, 1454
Eco57I CTGAAG 3 cut(s) 494, 1320, 2408
Eco81I CCTNAGG 2 cut(s) 1162, 2072
Eco91I GGTNACC 2 cut(s) 554, 2350
EcoO109I RGGNCCY 1 cut(s) 1454
EcoO65I GGTNACC 2 cut(s) 554, 2350
EcoRI GAATTC 6 cut(s) 901, 990, 2366, 2543, 2580, 2652
EcoRII CCWGG 3 cut(s) 324, 2354, 2749
EcoT14I CCWWGG 2 cut(s) 2052, 2142
EcoT22I ATGCAT 1 cut(s) 137
ErhI CCWWGG 2 cut(s) 2052, 2142
FalI AAGNNNNNCTT 6 cut(s) 663, 695, 845, 877, 2641, 2673
FaqI GGGAC 5 cut(s) 546, 900, 1251, 1343, 2589
FauI CCCGC 1 cut(s) 1695
FbaI TGATCA 1 cut(s) 1054
Fnu4HI GCNGC 1 cut(s) 1678
FokI GGATG 6 cut(s) 1091, 1180, 1208, 1816, 2152, 2915
Fsp4HI GCNGC 1 cut(s) 1678
GlaI GCGC 4 cut(s) 154, 156, 1341, 2833
GluI GCNGC 1 cut(s) 1678
GsaI CCCAGC 2 cut(s) 1346, 2197
HaeIII GGCC 6 cut(s) 117, 896, 978, 1569, 1747, 2051
HapII CCGG 3 cut(s) 1566, 1743, 1890
HhaI GCGC 4 cut(s) 155, 157, 1342, 2834
Hin6I GCGC 4 cut(s) 153, 155, 1340, 2832
HinP1I GCGC 4 cut(s) 153, 155, 1340, 2832
HincII GTYRAC 3 cut(s) 715, 937, 1758
HindII GTYRAC 3 cut(s) 715, 937, 1758
HindIII AAGCTT 3 cut(s) 1418, 1613, 2813
HinfI GANTC 9 cut(s) 347, 538, 1112, 1242, 1529, 1825, 2383, 2491, 2687
HpaI GTTAAC 2 cut(s) 715, 937
HpaII CCGG 3 cut(s) 1566, 1743, 1890
HphI GGTGA 5 cut(s) 1934, 2048, 2213, 2362, 2444
Hpy166II GTNNAC 7 cut(s) 98, 676, 715, 937, 1758, 1997, 2183
Hpy188I TCNGA 7 cut(s) 474, 881, 1042, 1249, 1273, 1528, 2388
Hpy8I GTNNAC 7 cut(s) 98, 676, 715, 937, 1758, 1997, 2183
HpyCH4III ACNGT 2 cut(s) 986, 1445
HpyCH4IV ACGT 3 cut(s) 1916, 2158, 2267
HpyF10VI GCNNNNNNNGC 3 cut(s) 255, 1518, 1792
HpySE526I ACGT 3 cut(s) 1916, 2158, 2267
HspAI GCGC 4 cut(s) 153, 155, 1340, 2832
Kpn2I TCCGGA 1 cut(s) 1889
Ksp22I TGATCA 1 cut(s) 1054
KspAI GTTAAC 2 cut(s) 715, 937
KspI CCGCGG 1 cut(s) 1678
LmnI GCTCC 3 cut(s) 307, 692, 1176
LweI GCATC 6 cut(s) 175, 743, 1158, 1530, 1804, 2937
MaeII ACGT 3 cut(s) 1916, 2158, 2267
MaeIII GTNAC 8 cut(s) 401, 554, 590, 738, 1113, 1501, 1922, 2350
MbiI CCGCTC 1 cut(s) 2646
MfeI CAATTG 2 cut(s) 1625, 2198
MflI RGATCY 5 cut(s) 175, 1217, 1315, 2230, 2407
MhlI GDGCHC 2 cut(s) 2750, 2841
MlsI TGGCCA 1 cut(s) 896
MluNI TGGCCA 1 cut(s) 896
MlyI GAGTC 4 cut(s) 356, 1121, 1236, 2377
MmeI TCCRAC 3 cut(s) 1089, 1251, 1924
Mox20I TGGCCA 1 cut(s) 896
Mph1103I ATGCAT 1 cut(s) 137
MroI TCCGGA 1 cut(s) 1889
MroXI GAANNNNTTC 2 cut(s) 768, 905
MscI TGGCCA 1 cut(s) 896
MslI CAYNNNNRTG 5 cut(s) 1212, 1800, 2331, 2499, 2802
Msp20I TGGCCA 1 cut(s) 896
MspA1I CMGCKG 2 cut(s) 912, 1677
MspCI CTTAAG 1 cut(s) 412
MspI CCGG 3 cut(s) 1566, 1743, 1890
MspR9I CCNGG 4 cut(s) 326, 1744, 2356, 2751
MunI CAATTG 2 cut(s) 1625, 2198
MvaI CCWGG 3 cut(s) 326, 2356, 2751
MvnI CGCG 2 cut(s) 155, 1677
MwoI GCNNNNNNNGC 3 cut(s) 255, 1518, 1792
NciI CCSGG 1 cut(s) 1744
NheI GCTAGC 1 cut(s) 1727
NlaIV GGNNCC 5 cut(s) 694, 916, 1219, 1407, 2730
NmeAIII GCCGAG 1 cut(s) 2820
NmuCI GTSAC 4 cut(s) 1113, 1501, 1922, 2350
NsiI ATGCAT 1 cut(s) 137
NspI RCATGY 2 cut(s) 710, 1849
PauI GCGCGC 1 cut(s) 153
PciI ACATGT 1 cut(s) 706
PcsI WCGNNNNNNNCGW 1 cut(s) 2847
PdmI GAANNNNTTC 2 cut(s) 768, 905
PfeI GAWTC 5 cut(s) 538, 1529, 1825, 2491, 2687
PflMI CCANNNNNTGG 1 cut(s) 1582
PkrI GCNGC 1 cut(s) 1679
PleI GAGTC 4 cut(s) 355, 1120, 1236, 2377
PpsI GAGTC 4 cut(s) 355, 1120, 1236, 2377
Ppu21I YACGTR 1 cut(s) 1917
PpuMI RGGWCCY 1 cut(s) 1454
PscI ACATGT 1 cut(s) 706
Psp5II RGGWCCY 1 cut(s) 1454
Psp6I CCWGG 3 cut(s) 324, 2354, 2749
PspEI GGTNACC 2 cut(s) 554, 2350
PspFI CCCAGC 2 cut(s) 1342, 2193
PspGI CCWGG 3 cut(s) 324, 2354, 2749
PspN4I GGNNCC 5 cut(s) 694, 916, 1219, 1407, 2730
PspPI GGNCC 5 cut(s) 280, 676, 914, 1454, 1745
PspPPI RGGWCCY 1 cut(s) 1454
PsrI GAACNNNNNNTAC 2 cut(s) 1978, 2010
PstI CTGCAG 1 cut(s) 2456
PstNI CAGNNNCTG 1 cut(s) 1443
PsuI RGATCY 5 cut(s) 175, 1217, 1315, 2230, 2407
PteI GCGCGC 1 cut(s) 153
RsaI GTAC 3 cut(s) 1187, 1915, 2257
RsaNI GTAC 3 cut(s) 1186, 1914, 2256
RseI CAYNNNNRTG 5 cut(s) 1212, 1800, 2331, 2499, 2802
SacII CCGCGG 1 cut(s) 1678
SatI GCNGC 1 cut(s) 1678
Sau96I GGNCC 5 cut(s) 280, 676, 914, 1454, 1745
SchI GAGTC 4 cut(s) 356, 1121, 1236, 2377
ScrFI CCNGG 4 cut(s) 326, 1744, 2356, 2751
SduI GDGCHC 2 cut(s) 2750, 2841
SfaNI GCATC 6 cut(s) 175, 743, 1158, 1530, 1804, 2937
SfcI CTRYAG 1 cut(s) 2452
Sfr303I CCGCGG 1 cut(s) 1678
SgrBI CCGCGG 1 cut(s) 1678
SinI GGWCC 4 cut(s) 280, 676, 914, 1454
SmiMI CAYNNNNRTG 5 cut(s) 1212, 1800, 2331, 2499, 2802
SmlI CTYRAG 2 cut(s) 412, 1902
SmoI CTYRAG 2 cut(s) 412, 1902
SpeI ACTAGT 1 cut(s) 92
SsiI CCGC 8 cut(s) 256, 286, 912, 1675, 1677, 1688, 2533, 2646
SspI AATATT 3 cut(s) 46, 1969, 2698
StyD4I CCNGG 4 cut(s) 324, 1742, 2354, 2749
StyI CCWWGG 2 cut(s) 2052, 2142
TaaI ACNGT 2 cut(s) 986, 1445
TaiI ACGT 3 cut(s) 1919, 2161, 2270
TaqI TCGA 8 cut(s) 183, 419, 988, 2012, 2486, 2516, 2541, 2914
TauI GCSGC 1 cut(s) 1680
TfiI GAWTC 5 cut(s) 538, 1529, 1825, 2491, 2687
TscAI CASTG 5 cut(s) 265, 592, 1360, 2841, 2952
TseFI GTSAC 4 cut(s) 1113, 1501, 1922, 2350
Tsp45I GTSAC 4 cut(s) 1113, 1501, 1922, 2350
TspGWI ACGGA 1 cut(s) 1743
TspRI CASTG 5 cut(s) 265, 592, 1360, 2841, 2952
Van91I CCANNNNNTGG 1 cut(s) 1582
Vha464I CTTAAG 1 cut(s) 412
VpaK11BI GGWCC 4 cut(s) 280, 676, 914, 1454
XbaI TCTAGA 3 cut(s) 749, 1261, 1651
XceI RCATGY 2 cut(s) 710, 1849
XcmI CCANNNNNNNNNTGG 1 cut(s) 852
XmnI GAANNNNTTC 2 cut(s) 768, 905
Zsp2I ATGCAT 1 cut(s) 137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.