RchiOBHm_Chr5g0021531

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
15705520 .. 15708444
2925 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30158

Sequence Viewer

Length: 2925 bp
ATGGATTTCCATGTCAACTTCAACCCCATCTCTCGCCTCTTTCTCCACTTACTGCTCTTGTTAATTTTGGCCTCTTCATGCCTAAACACTAGCAGTATTGTGAAATCATGCATGGAGGAAGAGAGACGAGCTCTTCTCAGCTTTAAACAAGATCTCACTGATCCGTCTGCCAAGCTTTCTTCTTGGGTTGGTCATCAATGCTGTCGATGGAGAGGGATTTCATGCAACAACCGCACTGGTCATGTTGCAATGATTGACCTCCGGCATACATATGGTGATCAATGGAGCTCTTCAAAGTATGAAGAACCCCTGTGGGGTAAGTCAATTAATCCTTCTTTGCTTGGCTTGAAACATCTGAGTTACTTGGATTTAAGCAACAATGACTTCAACAAAATTCACTTTCCAAAATTCATTGGGCAGCTTACGAGTTTAAGCTATCTCAATCTCTCAGATTCCCACTTTTCAGGAGAGATTCCTTCTTCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAGTTCTAATTATGGTGGAGTCAATTCGAATAACTTGAATTGGCTTTCTAATCTCTCTTCCCTCAAATACCTCAGTCTTATAGGTGTGAACCTCAGCAGCACAGGAGTAAGTTGGCTGCATGCTGTTAACAAGCTTCCTTCACTCTTAGAGTTGCATTTGTCATCTTGTTCTATTCAAAACAATCCACACTCCCTGCAATCCATTAACTTGACATCACTTGCGGTCCTTGATATGTCATTTAATCATCTTATCAGTTCTTCATTTCCTAAATGGATTTTTAATCTTTCTAGCCTTACAAAACTTGATCTAAGTCATAATTCTTTCAGTGACCCCTCTGTTGATGAATTTGCAACCCTCAAATCTCTAGAACACCTTGATTTATCTCGCACGGGACTCAAAGGTCAAGTTCCCAAATTCATTGGAAATTTGTGCAAGCTGAAGTCATTAGATCTTTATGGCAACGAATTTGATGGGGGGATTCAAGAGTTTTTGAGTGGTTTTTCAAATTGTTCATTTAATAGAATGGAGTCACTAGATTTGTCTTCTTGTGGGCTGGTAGGCAAATTGCCTAGTTCGTTGGGAATCCTGAAAGGCCTGCAGCATCTCACCCTCTATGGTAATCTTCTCCACGGTTCCATTCCTGAAAGTTTGGGACAACTCTCTCAGCTAGTTAGCCTTGATCTCAGTTCTAATATTTTCAACGGTTCCATTCCTCAAAGTTTGGGACAACTCTCTCAGCTAGTTAACCTTGATCTCAGTTCTAATCTTTTCAACGGTTCCATTCCTCAAAGTTTGGGACAACTCACTCAGCTGGCTGACCTTGATCTGTCTGGTAATTCATGGGAAGGCTGTTTAACGGAAGCCCATTTCATAAATCTCACAAGATTAGGGTCCCTACGCTTGAGCACAACCCGAGATGTGCCCATCATTTTCAATTTGACTGATTATGAATGGGTTCCTCCTTTCAAGCTCGTTTTTATTCATATGGACAATTGCCGAGTAGGTGCTGGCTTCCCTCTATGGCTTCAATCTCAAACTGAGCTCCTGGAGGTCTCACTTAAGAATGCTGGAATCTCGGGTCCAATACCAGAGGAATGGCTCTTTAATATATCTTCGCAAATCGAATTTTTGGATTTATCTCACAATCAAATAAGCGGAAAGCTTCCGTTCCGATTCAACTCTTTTCCGGAGCTGCTGTCCATAGTTCTGAGCCATAATCAATTTGATGGCACTATTCCATCATCTATTTGTAGCATTCAATCTCTAGGTGAACTTGCTCTGAATAACAATCAGTTATCCGGAGAATTCCCTAAAGAATGGAGTTTGTGGAGCAACATAGAAGTTGTGGATGTCTCAAACAACAATATGTCCGGTAATATTCCAAGCTCAATGGGCATTCCAAGTTCTCTTCATATACTGAAGACAGACAACAATCATTTTAGCGGAGAAATTCCTTCTGCCTTGCAAAATTGCTCTGGTTTGGAGAGACTTTATCTTGGAGGCAACAAATTTACTGGAAGCATACCTTCTTGGATAGGATCAAAAGTGGACACATTCACAGTGCTGCAATTGCAATCGAACTCTTTAAGTGGACATATTCCTCATCATTTGTGCAGTCTTCCTCTGCTTCAGAACCTAGACCTTAGTCACAACAGATTTTCAGGGACTATTCCCAAGTGTTTGAATAATTTGATTTCTCTAGTCGACTATGGTCCTTTCGCCTGGACGGGCTTTTTAGATTTAGAAGTAACAACTGTGACAGTAAAAGGAAGAGCAAGTGAATACTTAGATAAAAATGCGCAGCTTCTATTCATTATTGATTTTTCAAGTAATGATTTAGAAGGTGAAATTCCTGAAGAAATCTGCAGCCTCGTTCAATTAGGTGCATTAAACTTGTCCATGAATCAATTAAGTGGACATATCCCCTCAAAAATTGGAAACTTGAAGTTGCTCGAAGCACTTGACCTCTCCCAGAACCAGCTTTCAGGACAGATCCCACAAAGTCTCGCTTCTCTGACCTTCTTGTCTCACTTGAACCTGTCTTGCAACAACTTGACCGGAAGAATTCCTTCGGGCAACCAACTTCAGACGCTCGATGATCCATCTATTTATGAGGGCAATCCTTCGCTCTGTGGATTTCCTCTTTCAAAATGCCCAGAAGACGGAGACAATAAGATGCATGAGCCTCGTGCAGAAGACAATAAAGATCATGAAGATGATGACAAAAAGCTTGGCTTCTATACCAGCGCGGTGCTCGGCTTTATCATAGGGTTTTGGGGTGTTTGCGGCACATTGATATTGAAGAAGTCATGGAGATATGCCTATTTTCAATTCTTTGACTGCATCAAAGAGAAAGTTGCACTAGCAATTGCATTGAAACTAGCTCGTCTACAAGGAAGATGGTGA

Protein Analysis

974

Amino Acids

107.52

Weight (kDa)

5.65

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 76 1.4e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 111 - 175 4.3e-06 Leucine-rich repeat region
LRR_14 PF23598 171 - 329 8.3e-10 Leucine-rich repeat region
LRR_8 PF13855 245 - 304 3.5e-09 Leucine rich repeat
LRR_14 PF23598 351 - 519 2e-13 Leucine-rich repeat region
LRR_14 PF23598 547 - 725 2.1e-06 Leucine-rich repeat region
LRR_8 PF13855 666 - 726 3.4e-06 Leucine rich repeat
LRR_14 PF23598 775 - 872 1.8e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 918, 2542
Acc16I TGCGCA 1 cut(s) 2319
AccI GTMKAC 2 cut(s) 2223, 2908
AccII CGCG 1 cut(s) 2768
AccIII TCCGGA 2 cut(s) 1705, 1817
AciI CCGC 6 cut(s) 232, 740, 1674, 1962, 2768, 2805
AclWI GGATC 4 cut(s) 155, 2065, 2506, 2612
AcuI CTGAAG 5 cut(s) 977, 1958, 2132, 2394, 2588
AfiI CCNNNNNNNGG 2 cut(s) 314, 2681
AflII CTTAAG 1 cut(s) 1577
AjnI CCWGG 2 cut(s) 1563, 2240
Alw21I GWGCWC 5 cut(s) 133, 290, 1427, 1563, 2775
Alw26I GTCTC 7 cut(s) 118, 1576, 1876, 1999, 2528, 2550, 2679
AlwI GGATC 4 cut(s) 155, 2065, 2506, 2612
Ama87I CYCGRG 2 cut(s) 1431, 1594
Aor13HI TCCGGA 2 cut(s) 1705, 1817
AoxI GGCC 2 cut(s) 69, 1111
ApeKI GCWGC 8 cut(s) 418, 615, 634, 1117, 1711, 2083, 2320, 2385
AseI ATTAAT 1 cut(s) 327
Asp700I GAANNNNTTC 2 cut(s) 1473, 2587
AspLEI GCGC 2 cut(s) 2320, 2768
AspS9I GGNCC 4 cut(s) 742, 1410, 1598, 2231
AsuHPI GGTGA 4 cut(s) 287, 1117, 1799, 2375
AsuII TTCGAA 1 cut(s) 545
AvaI CYCGRG 2 cut(s) 1431, 1594
AvaII GGWCC 4 cut(s) 742, 1410, 1598, 2231
BaeGI GKGCMC 1 cut(s) 1443
BanII GRGCYC 3 cut(s) 133, 290, 1563
BauI CACGAG 1 cut(s) 2706
BbsI GAAGAC 5 cut(s) 1053, 1946, 2129, 2685, 2721
Bbv12I GWGCWC 5 cut(s) 133, 290, 1427, 1563, 2775
BbvCI CCTCAGC 1 cut(s) 611
BbvI GCAGC 8 cut(s) 430, 621, 627, 1129, 1698, 2070, 2332, 2397
BccI CCATC 8 cut(s) 35, 201, 983, 1451, 1739, 1765, 2629, 2913
BcgI CGANNNNNNTGC 2 cut(s) 2687, 2721
BciT130I CCWGG 2 cut(s) 1565, 2242
BclI TGATCA 1 cut(s) 277
BcoDI GTCTC 7 cut(s) 118, 1576, 1876, 1999, 2528, 2550, 2679
BfmI CTRYAG 2 cut(s) 1115, 2383
BfrI CTTAAG 1 cut(s) 1577
BglII AGATCT 2 cut(s) 151, 967
BisI GCNGC 9 cut(s) 419, 616, 635, 1118, 1712, 2084, 2321, 2386, 2806
BlsI GCNGC 9 cut(s) 420, 617, 636, 1119, 1713, 2085, 2322, 2387, 2807
Bme1390I CCNGG 2 cut(s) 1565, 2242
Bme18I GGWCC 4 cut(s) 742, 1410, 1598, 2231
BmeT110I CYCGRG 2 cut(s) 1431, 1594
BmgT120I GGNCC 4 cut(s) 742, 1410, 1598, 2231
BmiI GGNNCC 7 cut(s) 1153, 1225, 1297, 1411, 1412, 1476, 1599
BmrFI CCNGG 2 cut(s) 1565, 2242
BmsI GCATC 3 cut(s) 1129, 2685, 2871
BoxI GACNNNNGTC 2 cut(s) 2163, 2229
BpiI GAAGAC 5 cut(s) 1053, 1946, 2129, 2685, 2721
BplI GAGNNNNNCTC 4 cut(s) 115, 147, 120, 152
BpmI CTGGAG 1 cut(s) 1586
Bpu10I CCTNAGC 1 cut(s) 611
Bpu14I TTCGAA 1 cut(s) 545
BpuEI CTTGAG 1 cut(s) 1441
BsaI GGTCTC 1 cut(s) 1576
BsaJI CCNNGG 1 cut(s) 1147
BsaWI WCCGGW 4 cut(s) 1705, 1817, 1889, 2576
BsaXI ACNNNNNCTCC 2 cut(s) 1700, 1730
Bsc4I CCNNNNNNNGG 2 cut(s) 314, 2681
Bse1I ACTGG 2 cut(s) 241, 2038
Bse3DI GCAATG 1 cut(s) 255
BseAI TCCGGA 2 cut(s) 1705, 1817
BseBI CCWGG 2 cut(s) 1565, 2242
BseDI CCNNGG 1 cut(s) 1147
BseGI GGATG 1 cut(s) 1873
BseLI CCNNNNNNNGG 2 cut(s) 314, 2681
BseMI GCAATG 1 cut(s) 255
BseNI ACTGG 2 cut(s) 241, 2038
BseSI GKGCMC 1 cut(s) 1443
BseXI GCAGC 8 cut(s) 430, 621, 627, 1129, 1698, 2070, 2332, 2397
BsgI GTGCAG 2 cut(s) 2152, 2730
Bsh1236I CGCG 1 cut(s) 2768
BshFI GGCC 2 cut(s) 71, 1113
BsiHKAI GWGCWC 5 cut(s) 133, 290, 1427, 1563, 2775
BsiHKCI CYCGRG 2 cut(s) 1431, 1594
BsiSI CCGG 5 cut(s) 262, 1706, 1818, 1890, 2577
BslFI GGGAC 6 cut(s) 924, 1185, 1257, 1329, 1396, 2197
BslI CCNNNNNNNGG 2 cut(s) 314, 2681
BsmAI GTCTC 7 cut(s) 118, 1576, 1876, 1999, 2528, 2550, 2679
BsmBI CGTCTC 1 cut(s) 118
BsmFI GGGAC 6 cut(s) 924, 1185, 1257, 1329, 1396, 2197
BsmI GAATGC 3 cut(s) 1588, 1773, 1914
BsnI GGCC 2 cut(s) 71, 1113
Bso31I GGTCTC 1 cut(s) 1576
BsoBI CYCGRG 2 cut(s) 1431, 1594
Bsp119I TTCGAA 1 cut(s) 545
Bsp1286I GDGCHC 6 cut(s) 133, 290, 1427, 1443, 1563, 2775
Bsp13I TCCGGA 2 cut(s) 1705, 1817
BspACI CCGC 6 cut(s) 232, 740, 1674, 1962, 2768, 2805
BspANI GGCC 2 cut(s) 71, 1113
BspEI TCCGGA 2 cut(s) 1705, 1817
BspFNI CGCG 1 cut(s) 2768
BspHI TCATGA 1 cut(s) 2728
BspLI GGNNCC 7 cut(s) 1153, 1225, 1297, 1411, 1412, 1476, 1599
BspMAI CTGCAG 2 cut(s) 1119, 2387
BspPI GGATC 4 cut(s) 155, 2065, 2506, 2612
BspQI GCTCTTC 3 cut(s) 138, 295, 2284
BspT104I TTCGAA 1 cut(s) 545
BspTI CTTAAG 1 cut(s) 1577
BspTNI GGTCTC 1 cut(s) 1576
BsrDI GCAATG 1 cut(s) 255
BsrI ACTGG 2 cut(s) 241, 2038
BssECI CCNNGG 1 cut(s) 1147
BssSI CACGAG 1 cut(s) 2706
Bst2BI CACGAG 1 cut(s) 2706
Bst2UI CCWGG 2 cut(s) 1565, 2242
Bst4CI ACNGT 6 cut(s) 1151, 1223, 1295, 2080, 2275, 2281
Bst6I CTCTTC 7 cut(s) 79, 114, 138, 295, 580, 1932, 2284
BstAFI CTTAAG 1 cut(s) 1577
BstBI TTCGAA 1 cut(s) 545
BstC8I GCNNGC 5 cut(s) 639, 953, 1115, 1332, 1528
BstDSI CCRYGG 1 cut(s) 1147
BstEII GGTNACC 1 cut(s) 488
BstF5I GGATG 1 cut(s) 1873
BstFNI CGCG 1 cut(s) 2768
BstHHI GCGC 2 cut(s) 2320, 2768
BstMAI GTCTC 7 cut(s) 118, 1576, 1876, 1999, 2528, 2550, 2679
BstMWI GCNNNNNNNGC 3 cut(s) 231, 1911, 2089
BstNI CCWGG 2 cut(s) 1565, 2242
BstNSI RCATGY 1 cut(s) 641
BstPAI GACNNNNGTC 2 cut(s) 2163, 2229
BstPI GGTNACC 1 cut(s) 488
BstSCI CCNGG 2 cut(s) 1563, 2240
BstSFI CTRYAG 2 cut(s) 1115, 2383
BstSLI GKGCMC 1 cut(s) 1443
BstUI CGCG 1 cut(s) 2768
BstV1I GCAGC 8 cut(s) 430, 621, 627, 1129, 1698, 2070, 2332, 2397
BstV2I GAAGAC 5 cut(s) 1053, 1946, 2129, 2685, 2721
BstX2I RGATCY 3 cut(s) 151, 967, 2511
BstXI CCANNNNNNTGG 1 cut(s) 1614
BstYI RGATCY 3 cut(s) 151, 967, 2511
BsuRI GGCC 2 cut(s) 71, 1113
BtgI CCRYGG 1 cut(s) 1147
BtsCI GGATG 1 cut(s) 1873
BtsIMutI CAGTG 4 cut(s) 156, 234, 850, 2085
Cac8I GCNNGC 5 cut(s) 639, 953, 1115, 1332, 1528
CciI TCATGA 1 cut(s) 2728
CfoI GCGC 2 cut(s) 2320, 2768
Cfr13I GGNCC 4 cut(s) 742, 1410, 1598, 2231
CseI GACGC 1 cut(s) 2617
DraI TTTAAA 1 cut(s) 145
DrdI GACNNNNNNGTC 2 cut(s) 918, 2542
DseDI GACNNNNNNGTC 2 cut(s) 918, 2542
Eam1104I CTCTTC 7 cut(s) 79, 114, 138, 295, 580, 1932, 2284
EarI CTCTTC 7 cut(s) 79, 114, 138, 295, 580, 1932, 2284
Ecl136II GAGCTC 3 cut(s) 131, 288, 1561
Eco147I AGGCCT 1 cut(s) 1113
Eco24I GRGCYC 3 cut(s) 133, 290, 1563
Eco31I GGTCTC 1 cut(s) 1576
Eco47I GGWCC 4 cut(s) 742, 1410, 1598, 2231
Eco53kI GAGCTC 3 cut(s) 131, 288, 1561
Eco57I CTGAAG 5 cut(s) 977, 1958, 2132, 2394, 2588
Eco88I CYCGRG 2 cut(s) 1431, 1594
Eco91I GGTNACC 1 cut(s) 488
EcoICRI GAGCTC 3 cut(s) 131, 288, 1561
EcoO109I RGGNCCY 1 cut(s) 1410
EcoO65I GGTNACC 1 cut(s) 488
EcoRI GAATTC 2 cut(s) 1823, 2583
EcoRII CCWGG 2 cut(s) 1563, 2240
EcoT22I ATGCAT 2 cut(s) 113, 2700
EcoT38I GRGCYC 3 cut(s) 133, 290, 1563
Esp3I CGTCTC 1 cut(s) 118
FalI AAGNNNNNCTT 8 cut(s) 2029, 2061, 2512, 2544, 2572, 2604, 2738, 2770
FaqI GGGAC 6 cut(s) 924, 1185, 1257, 1329, 1396, 2197
FauNDI CATATG 2 cut(s) 271, 1503
FbaI TGATCA 1 cut(s) 277
FblI GTMKAC 2 cut(s) 2223, 2908
Fnu4HI GCNGC 9 cut(s) 419, 616, 635, 1118, 1712, 2084, 2321, 2386, 2806
FokI GGATG 1 cut(s) 1880
FriOI GRGCYC 3 cut(s) 133, 290, 1563
Fsp4HI GCNGC 9 cut(s) 419, 616, 635, 1118, 1712, 2084, 2321, 2386, 2806
FspI TGCGCA 1 cut(s) 2319
GlaI GCGC 2 cut(s) 2319, 2767
GluI GCNGC 9 cut(s) 419, 616, 635, 1118, 1712, 2084, 2321, 2386, 2806
GsuI CTGGAG 1 cut(s) 1586
HaeIII GGCC 2 cut(s) 71, 1113
HapII CCGG 5 cut(s) 262, 1706, 1818, 1890, 2577
HgaI GACGC 1 cut(s) 2617
HhaI GCGC 2 cut(s) 2320, 2768
Hin6I GCGC 2 cut(s) 2318, 2766
HinP1I GCGC 2 cut(s) 2318, 2766
HincII GTYRAC 4 cut(s) 16, 646, 1264, 2224
HindII GTYRAC 4 cut(s) 16, 646, 1264, 2224
HindIII AAGCTT 4 cut(s) 173, 650, 1679, 2747
HpaI GTTAAC 2 cut(s) 646, 1264
HpaII CCGG 5 cut(s) 262, 1706, 1818, 1890, 2577
HphI GGTGA 4 cut(s) 287, 1117, 1799, 2375
Hpy188I TCNGA 8 cut(s) 357, 451, 1691, 1728, 1800, 2151, 2535, 2607
HpyCH4III ACNGT 6 cut(s) 1151, 1223, 1295, 2080, 2275, 2281
HpyF10VI GCNNNNNNNGC 3 cut(s) 231, 1911, 2089
HspAI GCGC 2 cut(s) 2318, 2766
KflI GGGWCCC 1 cut(s) 1410
Kpn2I TCCGGA 2 cut(s) 1705, 1817
Ksp22I TGATCA 1 cut(s) 277
KspAI GTTAAC 2 cut(s) 646, 1264
LguI GCTCTTC 3 cut(s) 138, 295, 2284
LmnI GCTCC 4 cut(s) 285, 1566, 1708, 1848
Lsp1109I GCAGC 8 cut(s) 430, 621, 627, 1129, 1698, 2070, 2332, 2397
LweI GCATC 3 cut(s) 1129, 2685, 2871
MaeIII GTNAC 7 cut(s) 359, 488, 845, 1047, 2165, 2266, 2275
MfeI CAATTG 3 cut(s) 1510, 2087, 2886
MflI RGATCY 3 cut(s) 151, 967, 2511
MhlI GDGCHC 6 cut(s) 133, 290, 1427, 1443, 1563, 2775
MlyI GAGTC 3 cut(s) 546, 906, 1055
Mph1103I ATGCAT 2 cut(s) 113, 2700
MroI TCCGGA 2 cut(s) 1705, 1817
MroXI GAANNNNTTC 2 cut(s) 1473, 2587
MslI CAYNNNNRTG 2 cut(s) 270, 2733
MspA1I CMGCKG 1 cut(s) 1330
MspCI CTTAAG 1 cut(s) 1577
MspI CCGG 5 cut(s) 262, 1706, 1818, 1890, 2577
MspR9I CCNGG 2 cut(s) 1565, 2242
MunI CAATTG 3 cut(s) 1510, 2087, 2886
Mva1269I GAATGC 3 cut(s) 1588, 1773, 1914
MvaI CCWGG 2 cut(s) 1565, 2242
MvnI CGCG 1 cut(s) 2768
MwoI GCNNNNNNNGC 3 cut(s) 231, 1911, 2089
NdeI CATATG 2 cut(s) 271, 1503
NlaIV GGNNCC 7 cut(s) 1153, 1225, 1297, 1411, 1412, 1476, 1599
NmeAIII GCCGAG 2 cut(s) 1541, 2754
NmuCI GTSAC 4 cut(s) 845, 1047, 2165, 2275
NsbI TGCGCA 1 cut(s) 2319
NsiI ATGCAT 2 cut(s) 113, 2700
NspI RCATGY 1 cut(s) 641
NspV TTCGAA 1 cut(s) 545
PaeI GCATGC 1 cut(s) 641
PagI TCATGA 1 cut(s) 2728
PceI AGGCCT 1 cut(s) 1113
PciSI GCTCTTC 3 cut(s) 138, 295, 2284
PctI GAATGC 3 cut(s) 1588, 1773, 1914
PdmI GAANNNNTTC 2 cut(s) 1473, 2587
PfeI GAWTC 7 cut(s) 452, 472, 997, 1101, 1590, 1692, 2422
PfoI TCCNGGA 1 cut(s) 1563
PkrI GCNGC 9 cut(s) 420, 617, 636, 1119, 1713, 2085, 2322, 2387, 2807
PleI GAGTC 3 cut(s) 545, 906, 1054
PpsI GAGTC 3 cut(s) 545, 906, 1054
PpuMI RGGWCCY 1 cut(s) 1410
PshAI GACNNNNGTC 2 cut(s) 2163, 2229
PshBI ATTAAT 1 cut(s) 327
Psp124BI GAGCTC 3 cut(s) 133, 290, 1563
Psp5II RGGWCCY 1 cut(s) 1410
Psp6I CCWGG 2 cut(s) 1563, 2240
PspEI GGTNACC 1 cut(s) 488
PspGI CCWGG 2 cut(s) 1563, 2240
PspN4I GGNNCC 7 cut(s) 1153, 1225, 1297, 1411, 1412, 1476, 1599
PspPI GGNCC 4 cut(s) 742, 1410, 1598, 2231
PspPPI RGGWCCY 1 cut(s) 1410
PstI CTGCAG 2 cut(s) 1119, 2387
PsuI RGATCY 3 cut(s) 151, 967, 2511
PvuII CAGCTG 1 cut(s) 1330
RseI CAYNNNNRTG 2 cut(s) 270, 2733
SacI GAGCTC 3 cut(s) 133, 290, 1563
SalI GTCGAC 1 cut(s) 2222
SapI GCTCTTC 3 cut(s) 138, 295, 2284
SatI GCNGC 9 cut(s) 419, 616, 635, 1118, 1712, 2084, 2321, 2386, 2806
Sau96I GGNCC 4 cut(s) 742, 1410, 1598, 2231
SchI GAGTC 3 cut(s) 546, 906, 1055
ScrFI CCNGG 2 cut(s) 1565, 2242
SduI GDGCHC 6 cut(s) 133, 290, 1427, 1443, 1563, 2775
SfaNI GCATC 3 cut(s) 1129, 2685, 2871
SfcI CTRYAG 2 cut(s) 1115, 2383
SfuI TTCGAA 1 cut(s) 545
SinI GGWCC 4 cut(s) 742, 1410, 1598, 2231
SmiMI CAYNNNNRTG 2 cut(s) 270, 2733
SmlI CTYRAG 2 cut(s) 1420, 1577
SmoI CTYRAG 2 cut(s) 1420, 1577
SphI GCATGC 1 cut(s) 641
SseBI AGGCCT 1 cut(s) 1113
SsiI CCGC 6 cut(s) 232, 740, 1674, 1962, 2768, 2805
SspI AATATT 2 cut(s) 1213, 1897
SstI GAGCTC 3 cut(s) 133, 290, 1563
StuI AGGCCT 1 cut(s) 1113
StyD4I CCNGG 2 cut(s) 1563, 2240
TaaI ACNGT 6 cut(s) 1151, 1223, 1295, 2080, 2275, 2281
TaqI TCGA 7 cut(s) 205, 545, 1641, 2096, 2223, 2472, 2613
TauI GCSGC 1 cut(s) 2808
TfiI GAWTC 7 cut(s) 452, 472, 997, 1101, 1590, 1692, 2422
TscAI CASTG 4 cut(s) 163, 241, 850, 2085
TseFI GTSAC 4 cut(s) 845, 1047, 2165, 2275
TseI GCWGC 8 cut(s) 418, 615, 634, 1117, 1711, 2083, 2320, 2385
Tsp45I GTSAC 4 cut(s) 845, 1047, 2165, 2275
TspGWI ACGGA 4 cut(s) 153, 1391, 1674, 2697
TspRI CASTG 4 cut(s) 163, 241, 850, 2085
Vha464I CTTAAG 1 cut(s) 1577
VpaK11BI GGWCC 4 cut(s) 742, 1410, 1598, 2231
VspI ATTAAT 1 cut(s) 327
XbaI TCTAGA 1 cut(s) 883
XceI RCATGY 1 cut(s) 641
XmiI GTMKAC 2 cut(s) 2223, 2908
XmnI GAANNNNTTC 2 cut(s) 1473, 2587
Zsp2I ATGCAT 2 cut(s) 113, 2700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.