Rroxscaffold_2G00102160

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
24196523 .. 24199464
2942 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00102160.1

Sequence Viewer

Length: 2661 bp
ATGGGACACAGTACCGCATCGTTCTTGCTTCTTTCACTTTTACTACTGTCAGGAACTTCATACCTTGACACAGTTACACTTGGTTTCTGCAGTGCACATGCTAATGTGGGTTGCATGGATATCGAGAGGAAAGCCCTTCTGAAGCTCAGAGAGGGACTCGCTGATCCTTCAGACCGGCTTTCAGCTTGGGTTGGAGTAGATTGCTGCAAATGGAGAGGTATAGGCTGCAACAAGACAACTGGACGCGTGGACAGCCTCAATCTTCGCAACCCGTATGTAGAAGTTTCGGAGAGTGATGATGGAACACTCCCTGCTTTAGGAGGTGAGATCAATCCTTCATTGCTTGTTTTGAAAGATTTGGTTTACTTGGATTTGAGCATGAATAACTTTGGAGGTCTAGAACTTCCAAGTTTCATTGTATCACTAGAAAAAATAACATATCTCAATCTATCTGGTGCATCATTTGGTGGAGTAATTCCCGCCAATCTTGGAAACCTTTCAAAATTGCTTCATCTTGATCTCAGTAATAATGCTGTTGAGAGTGATCTCAGATGGCTTTCCAGTCTTTCTTCCTTACAGTTTCTTAACTTGGGAGGAGCAAACCTTACCAAGGCTGCACCATATTGGCTTCCCACTGTTAATATGCTCCCTTCACTTCTTCAATTGCAAATGCCTGGTTGTGGACTTTCCATCCTTCCACCTACTCTTCCTCATATCAATTTCACATCACTTTTGGTTCTTGACCTCTCTGCCAATGGTTTCAACTCCACACTTTCTCCCTGGTTGTTCAATCTGACTGAACTAGTCAACCTTGAAGTAGGAACAATCTCAATGGAGAAATTCCAGAAACACTCGGGAGGTTCTATCCCAGAATCTATTGGAAACTTGACATCTTTGGAGGAATTTTACCTTGCAAGAAATAAAATGGGTGGAGTCATCCCAGAAAGTTTTGGGCAGCTCTCATCACTCGTTACAGTAGATCTCTCTGCAACCACATGGGAAGGTGTTATAACGGAAGCTCATTTTCTGAAACTTCGAAGCTTAAAAGAGGCGGTAATCCAGAAAGCCTCCCAAAACATTTCCCTAGTTTTCAACATTAGTTCTAATTGGATACCTCCTTCCAAATTGACATACTTGATCCTTGAATCATGTCAATTGGGTCCTAAATTTCCTGCATGGCTTAGAAATCAGACTGAGCTTGTCACGGTGGTCCTCAATAATGCTAAGATTGCAGATACCATACCAGATTGGTTTTGGCAGTTGGATTTGTTATTAGATGAAATAAGTGTTGCTTACAATCAACTAGGCGGCAAGTTGCCTAACTCGCTAAGGTTCAGCTATAGTGGTAATGCTGATTTGAGTACAAACCTGTTTGAGGGGCCCCTCCCACTTTGGTCATCAAACATTACAACGCTCTACCTCAGGGATAATTTGTTTTCAGGGCCAATTCCTTCAAACATTGGTGATGTGATGCCGTCCTTGTTAGAGTTAGACATCTCTAGGAATGGTTTGAGTGGAAGCATTCCCCTGTCTCTAGGTAATCTAAGCCTTCTGACAACCATGGTTCTCTCAAATAATTACTTGTCTGGTGAAATTCCTCATTTCTGGAACAGTATACCAAACTTGTATTTGTTAGATATGTCAAACAACAGTCTCTCTGGTACAATTCCAAGATCCATGGATTCTCTTGGTTCACTCTTGTTCTTGATTCTCTCTAGTAACAACTTGTCAGGCGAACTTCCTTCACTGAGAAACTGCACTGGCATGAAGAGTCTTGATCTTGGGGAAAATAAGTTCTTTGGAAACATTCCGGCATGGATAGGAGAAAGCATGCCCTCACTGTTGATTTTACGCTTGAGTTCCAACTCATTCACCGGAAGCATTCCTTCACAGTTGTGTGGCCTTTCCAATCTTCACATATTGGATCTCTCACAAAATAATCTGTCTGGTCATATTCCCAGCTGTGTTGGTAACTTGAGTGGCTTGAAAACATCTGTATTCTCAGATAAAGATACATCATACCTTTACCAGGGAAAGTTGAAGGTCGTGGCAAGAAGAAGAGTGCAAGACTACGGTTCCACTCTTTATCTTGTTAATAGCCTAGATCTCTCAAACAACAACTTATCAGGTGAGATGCCGAGGGAGCTCACGAGCCTGATAAAGTTGTGGACCTTGAACTTATCCATGAATCATCTGACAGGAGTAATTCCATCAAGGATTGGGAGCATGGTGGGGATAGAATCTCTTCATTTGTCAATAAACCAGCTTTCAGGTTCCATTCCCCAGAGCATGGTTTCATTGACATTCTTGAGTTATCTAAACCTCTCATACAACAAATTGTCTGGGAAAATCCCAACAGGCAACCAGTTTAACACCCTAGTTCCATCAGTCTATGAAGGCAATGCCGGTCTTTGTGGTTTTCCGTTGCCTGATTGCCAAGTCAATGGCGGAACTCCTCAGGGTCCAAGTGGAGGTGGAGAAGACACTGGCTTTAAATTGTGGGGTTTCATCATCAGCATGGTGATCGGTTTCGTTATGGGGTTCTGGGGAGTTTGTGGGAGTTTGGTCATCAGCAAGCCTTGGAGGAAGACATATTTCCACTTCACTGACAAAATGATTGTTGCTTGTATACGAAAATATCAGGGGGCACAGGAAATTTAA

Protein Analysis

886

Amino Acids

96.2

Weight (kDa)

5.64

Isoelectric Point (pI)

35.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 42 - 77 1.4e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 183 - 398 7.2e-13 Leucine-rich repeat region
LRR_8 PF13855 589 - 648 5.3e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1010
AccB7I CCANNNNNTGG 1 cut(s) 2290
AccI GTMKAC 2 cut(s) 1615, 2629
AccII CGCG 1 cut(s) 246
AciI CCGC 5 cut(s) 15, 480, 1052, 1308, 2448
AclWI GGATC 4 cut(s) 158, 1132, 1668, 1932
AcsI RAATTY 5 cut(s) 839, 902, 1166, 1593, 2655
AcuI CTGAAG 2 cut(s) 153, 161
AfaI GTAC 3 cut(s) 13, 1363, 1663
AfiI CCNNNNNNNGG 7 cut(s) 317, 610, 680, 1375, 2029, 2290, 2471
AflIII ACRYGT 1 cut(s) 244
AhlI ACTAGT 1 cut(s) 802
AjnI CCWGG 3 cut(s) 673, 779, 2028
AleI CACNNNNGTG 1 cut(s) 1894
AloI GAACNNNNNNTCC 2 cut(s) 1778, 1810
Alw21I GWGCWC 2 cut(s) 97, 2148
Alw26I GTCTC 2 cut(s) 1536, 1658
Alw44I GTGCAC 1 cut(s) 93
AlwI GGATC 4 cut(s) 158, 1132, 1668, 1932
Ama87I CYCGRG 1 cut(s) 853
AoxI GGCC 3 cut(s) 1379, 1442, 1900
ApaI GGGCCC 1 cut(s) 1383
ApaLI GTGCAC 1 cut(s) 93
ApeKI GCWGC 4 cut(s) 204, 225, 614, 955
ApoI RAATTY 5 cut(s) 839, 902, 1166, 1593, 2655
Asp700I GAANNNNTTC 2 cut(s) 496, 2244
AspS9I GGNCC 7 cut(s) 1160, 1210, 1379, 1380, 1442, 2169, 2462
AsuHPI GGTGA 6 cut(s) 335, 1475, 1601, 1864, 2141, 2533
AsuII TTCGAA 1 cut(s) 1036
AvaI CYCGRG 1 cut(s) 853
AvaII GGWCC 4 cut(s) 1160, 1210, 2169, 2462
AxyI CCTNAGG 2 cut(s) 1421, 2457
BaeGI GKGCMC 3 cut(s) 97, 1383, 2650
BanII GRGCYC 2 cut(s) 1383, 2148
BauI CACGAG 1 cut(s) 2149
BbsI GAAGAC 2 cut(s) 2487, 2594
Bbv12I GWGCWC 2 cut(s) 97, 2148
BbvI GCAGC 4 cut(s) 191, 212, 601, 967
BccI CCATC 5 cut(s) 293, 546, 698, 2218, 2392
BceAI ACGGC 1 cut(s) 1459
BcgI CGANNNNNNTGC 4 cut(s) 103, 137, 2506, 2540
BciT130I CCWGG 3 cut(s) 675, 781, 2030
BciVI GTATCC 1 cut(s) 1104
BcoDI GTCTC 2 cut(s) 1536, 1658
BcuI ACTAGT 1 cut(s) 802
BfmI CTRYAG 2 cut(s) 88, 1339
BfuI GTATCC 1 cut(s) 1104
BglII AGATCT 2 cut(s) 979, 2104
BisI GCNGC 5 cut(s) 205, 226, 615, 956, 1309
BlsI GCNGC 5 cut(s) 206, 227, 616, 957, 1310
Bme1390I CCNGG 3 cut(s) 675, 781, 2030
Bme18I GGWCC 4 cut(s) 1160, 1210, 2169, 2462
BmeT110I CYCGRG 1 cut(s) 853
BmgT120I GGNCC 7 cut(s) 1160, 1210, 1379, 1380, 1442, 2169, 2462
BmiI GGNNCC 7 cut(s) 1161, 1380, 1381, 1382, 2077, 2275, 2463
BmrFI CCNGG 3 cut(s) 675, 781, 2030
BmsI GCATC 4 cut(s) 26, 467, 1461, 2124
BpiI GAAGAC 2 cut(s) 2487, 2594
BplI GAGNNNNNCTC 2 cut(s) 141, 173
Bpu10I CCTNAGC 1 cut(s) 1328
Bpu14I TTCGAA 1 cut(s) 1036
BpuEI CTTGAG 3 cut(s) 1876, 1996, 2329
BsaJI CCNNGG 7 cut(s) 609, 779, 1560, 1677, 2029, 2138, 2579
BsaWI WCCGGW 1 cut(s) 1874
BsaXI ACNNNNNCTCC 2 cut(s) 760, 790
Bsc4I CCNNNNNNNGG 7 cut(s) 317, 610, 680, 1375, 2029, 2290, 2471
Bse118I RCCGGY 2 cut(s) 174, 2405
Bse1I ACTGG 5 cut(s) 244, 561, 1765, 2365, 2491
Bse21I CCTNAGG 2 cut(s) 1421, 2457
Bse3DI GCAATG 2 cut(s) 338, 2407
BseBI CCWGG 3 cut(s) 675, 781, 2030
BseDI CCNNGG 7 cut(s) 609, 779, 1560, 1677, 2029, 2138, 2579
BseGI GGATG 2 cut(s) 690, 936
BseLI CCNNNNNNNGG 7 cut(s) 317, 610, 680, 1375, 2029, 2290, 2471
BseMI GCAATG 2 cut(s) 338, 2407
BseMII CTCAG 8 cut(s) 160, 535, 562, 1185, 1435, 1739, 2016, 2471
BseNI ACTGG 5 cut(s) 244, 561, 1765, 2365, 2491
BseRI GAGGAG 2 cut(s) 609, 2445
BseSI GKGCMC 3 cut(s) 97, 1383, 2650
BseXI GCAGC 4 cut(s) 191, 212, 601, 967
BseYI CCCAGC 1 cut(s) 1958
BsgI GTGCAG 2 cut(s) 600, 1741
Bsh1236I CGCG 1 cut(s) 246
BshFI GGCC 3 cut(s) 1381, 1444, 1902
BsiHKAI GWGCWC 2 cut(s) 97, 2148
BsiHKCI CYCGRG 1 cut(s) 853
BsiSI CCGG 4 cut(s) 175, 1811, 1875, 2406
BslFI GGGAC 2 cut(s) 18, 168
BslI CCNNNNNNNGG 7 cut(s) 317, 610, 680, 1375, 2029, 2290, 2471
BsmAI GTCTC 2 cut(s) 1536, 1658
BsmFI GGGAC 2 cut(s) 18, 168
BsmI GAATGC 2 cut(s) 1521, 1881
BsnI GGCC 3 cut(s) 1381, 1444, 1902
BsoBI CYCGRG 1 cut(s) 853
Bsp119I TTCGAA 1 cut(s) 1036
Bsp120I GGGCCC 1 cut(s) 1379
Bsp1286I GDGCHC 4 cut(s) 97, 1383, 2148, 2650
Bsp19I CCATGG 2 cut(s) 1560, 1677
BspACI CCGC 5 cut(s) 15, 480, 1052, 1308, 2448
BspANI GGCC 3 cut(s) 1381, 1444, 1902
BspCNI CTCAG 8 cut(s) 159, 534, 561, 1186, 1434, 1740, 2015, 2470
BspFNI CGCG 1 cut(s) 246
BspLI GGNNCC 7 cut(s) 1161, 1380, 1381, 1382, 2077, 2275, 2463
BspMAI CTGCAG 1 cut(s) 92
BspPI GGATC 4 cut(s) 158, 1132, 1668, 1932
BspT104I TTCGAA 1 cut(s) 1036
BsrDI GCAATG 2 cut(s) 338, 2407
BsrFI RCCGGY 2 cut(s) 174, 2405
BsrI ACTGG 5 cut(s) 244, 561, 1765, 2365, 2491
BssAI RCCGGY 2 cut(s) 174, 2405
BssECI CCNNGG 7 cut(s) 609, 779, 1560, 1677, 2029, 2138, 2579
BssNAI GTATAC 2 cut(s) 1616, 2630
BssSI CACGAG 1 cut(s) 2149
BssT1I CCWWGG 4 cut(s) 609, 1560, 1677, 2579
Bst1107I GTATAC 2 cut(s) 1616, 2630
Bst2BI CACGAG 1 cut(s) 2149
Bst2UI CCWGG 3 cut(s) 675, 781, 2030
Bst6I CTCTTC 4 cut(s) 711, 1763, 2053, 2250
BstBI TTCGAA 1 cut(s) 1036
BstC8I GCNNGC 2 cut(s) 1832, 2576
BstDSI CCRYGG 2 cut(s) 1560, 1677
BstENI CCTNNNNNAGG 4 cut(s) 315, 608, 1373, 2027
BstF5I GGATG 2 cut(s) 690, 936
BstFNI CGCG 1 cut(s) 246
BstMAI GTCTC 2 cut(s) 1536, 1658
BstMWI GCNNNNNNNGC 4 cut(s) 252, 1229, 1324, 2143
BstNI CCWGG 3 cut(s) 675, 781, 2030
BstNSI RCATGY 2 cut(s) 101, 1834
BstSCI CCNGG 3 cut(s) 673, 779, 2028
BstSFI CTRYAG 2 cut(s) 88, 1339
BstSLI GKGCMC 3 cut(s) 97, 1383, 2650
BstUI CGCG 1 cut(s) 246
BstV1I GCAGC 4 cut(s) 191, 212, 601, 967
BstV2I GAAGAC 2 cut(s) 2487, 2594
BstX2I RGATCY 4 cut(s) 979, 1673, 1924, 2104
BstXI CCANNNNNNTGG 1 cut(s) 2444
BstYI RGATCY 4 cut(s) 979, 1673, 1924, 2104
BstZ17I GTATAC 2 cut(s) 1616, 2630
Bsu36I CCTNAGG 2 cut(s) 1421, 2457
BsuI GTATCC 1 cut(s) 1104
BsuRI GGCC 3 cut(s) 1381, 1444, 1902
BtgI CCRYGG 2 cut(s) 1560, 1677
BtsCI GGATG 2 cut(s) 690, 936
BtsI GCAGTG 1 cut(s) 97
BtsIMutI CAGTG 7 cut(s) 97, 633, 1745, 1758, 1838, 2484, 2604
Cac8I GCNNGC 2 cut(s) 1832, 2576
Cfr10I RCCGGY 2 cut(s) 174, 2405
Cfr13I GGNCC 7 cut(s) 1160, 1210, 1379, 1380, 1442, 2169, 2462
CseI GACGC 1 cut(s) 252
Csp6I GTAC 3 cut(s) 12, 1362, 1662
CviQI GTAC 3 cut(s) 12, 1362, 1662
DraI TTTAAA 1 cut(s) 2494
Eam1104I CTCTTC 4 cut(s) 711, 1763, 2053, 2250
EarI CTCTTC 4 cut(s) 711, 1763, 2053, 2250
EciI GGCGGA 1 cut(s) 2463
Ecl136II GAGCTC 1 cut(s) 2146
Eco130I CCWWGG 4 cut(s) 609, 1560, 1677, 2579
Eco24I GRGCYC 2 cut(s) 1383, 2148
Eco32I GATATC 1 cut(s) 121
Eco47I GGWCC 4 cut(s) 1160, 1210, 2169, 2462
Eco53kI GAGCTC 1 cut(s) 2146
Eco57I CTGAAG 2 cut(s) 153, 161
Eco81I CCTNAGG 2 cut(s) 1421, 2457
Eco88I CYCGRG 1 cut(s) 853
EcoICRI GAGCTC 1 cut(s) 2146
EcoNI CCTNNNNNAGG 4 cut(s) 315, 608, 1373, 2027
EcoO109I RGGNCCY 3 cut(s) 1160, 1379, 1380
EcoRII CCWGG 3 cut(s) 673, 779, 2028
EcoRV GATATC 1 cut(s) 121
EcoT14I CCWWGG 4 cut(s) 609, 1560, 1677, 2579
EcoT38I GRGCYC 2 cut(s) 1383, 2148
ErhI CCWWGG 4 cut(s) 609, 1560, 1677, 2579
FalI AAGNNNNNCTT 4 cut(s) 1276, 1308, 1870, 1902
FaqI GGGAC 2 cut(s) 18, 168
FauI CCCGC 1 cut(s) 487
FblI GTMKAC 2 cut(s) 1615, 2629
Fnu4HI GCNGC 5 cut(s) 205, 226, 615, 956, 1309
FokI GGATG 2 cut(s) 677, 923
FriOI GRGCYC 2 cut(s) 1383, 2148
Fsp4HI GCNGC 5 cut(s) 205, 226, 615, 956, 1309
GluI GCNGC 5 cut(s) 205, 226, 615, 956, 1309
GsaI CCCAGC 1 cut(s) 1962
HaeIII GGCC 3 cut(s) 1381, 1444, 1902
HapII CCGG 4 cut(s) 175, 1811, 1875, 2406
HgaI GACGC 1 cut(s) 252
HincII GTYRAC 1 cut(s) 808
HindII GTYRAC 1 cut(s) 808
HindIII AAGCTT 1 cut(s) 1039
HinfI GANTC 9 cut(s) 156, 872, 933, 1145, 1682, 1708, 1771, 2188, 2240
HpaII CCGG 4 cut(s) 175, 1811, 1875, 2406
HphI GGTGA 6 cut(s) 335, 1475, 1601, 1864, 2141, 2533
Hpy166II GTNNAC 9 cut(s) 95, 250, 364, 683, 808, 1616, 1694, 2169, 2630
Hpy8I GTNNAC 9 cut(s) 95, 250, 364, 683, 808, 1616, 1694, 2169, 2630
HpyF10VI GCNNNNNNNGC 4 cut(s) 252, 1229, 1324, 2143
LmnI GCTCC 4 cut(s) 596, 651, 2143, 2223
Lsp1109I GCAGC 4 cut(s) 191, 212, 601, 967
LweI GCATC 4 cut(s) 26, 467, 1461, 2124
MaeIII GTNAC 5 cut(s) 73, 970, 1201, 1718, 1970
MfeI CAATTG 2 cut(s) 662, 1154
MflI RGATCY 4 cut(s) 979, 1673, 1924, 2104
MhlI GDGCHC 4 cut(s) 97, 1383, 2148, 2650
MluI ACGCGT 1 cut(s) 244
MlyI GAGTC 3 cut(s) 150, 942, 1780
MmeI TCCRAC 3 cut(s) 172, 1242, 1887
MroXI GAANNNNTTC 2 cut(s) 496, 2244
MseI TTAA 7 cut(s) 585, 639, 1043, 2094, 2370, 2493, 2659
MslI CAYNNNNRTG 4 cut(s) 102, 1763, 1894, 2516
MspA1I CMGCKG 1 cut(s) 1962
MspI CCGG 4 cut(s) 175, 1811, 1875, 2406
MspR9I CCNGG 3 cut(s) 675, 781, 2030
MunI CAATTG 2 cut(s) 662, 1154
Mva1269I GAATGC 2 cut(s) 1521, 1881
MvaI CCWGG 3 cut(s) 675, 781, 2030
MvnI CGCG 1 cut(s) 246
MwoI GCNNNNNNNGC 4 cut(s) 252, 1229, 1324, 2143
NcoI CCATGG 2 cut(s) 1560, 1677
NlaIV GGNNCC 7 cut(s) 1161, 1380, 1381, 1382, 2077, 2275, 2463
NmeAIII GCCGAG 1 cut(s) 2163
NmuCI GTSAC 1 cut(s) 1201
NspI RCATGY 2 cut(s) 101, 1834
NspV TTCGAA 1 cut(s) 1036
OliI CACNNNNGTG 1 cut(s) 1894
PaeI GCATGC 1 cut(s) 1834
PctI GAATGC 2 cut(s) 1521, 1881
PdmI GAANNNNTTC 2 cut(s) 496, 2244
PfeI GAWTC 6 cut(s) 872, 1145, 1682, 1708, 2188, 2240
PflMI CCANNNNNTGG 1 cut(s) 2290
PkrI GCNGC 5 cut(s) 206, 227, 616, 957, 1310
PleI GAGTC 3 cut(s) 150, 941, 1779
PpsI GAGTC 3 cut(s) 150, 941, 1779
PpuMI RGGWCCY 1 cut(s) 1160
PsiI TTATAA 1 cut(s) 1010
Psp124BI GAGCTC 1 cut(s) 2148
Psp5II RGGWCCY 1 cut(s) 1160
Psp6I CCWGG 3 cut(s) 673, 779, 2028
PspFI CCCAGC 1 cut(s) 1958
PspGI CCWGG 3 cut(s) 673, 779, 2028
PspN4I GGNNCC 7 cut(s) 1161, 1380, 1381, 1382, 2077, 2275, 2463
PspOMI GGGCCC 1 cut(s) 1379
PspPI GGNCC 7 cut(s) 1160, 1210, 1379, 1380, 1442, 2169, 2462
PspPPI RGGWCCY 1 cut(s) 1160
PstI CTGCAG 1 cut(s) 92
PsuI RGATCY 4 cut(s) 979, 1673, 1924, 2104
PvuII CAGCTG 1 cut(s) 1962
RsaI GTAC 3 cut(s) 13, 1363, 1663
RsaNI GTAC 3 cut(s) 12, 1362, 1662
RseI CAYNNNNRTG 4 cut(s) 102, 1763, 1894, 2516
SacI GAGCTC 1 cut(s) 2148
SaqAI TTAA 7 cut(s) 585, 639, 1043, 2094, 2370, 2493, 2659
SatI GCNGC 5 cut(s) 205, 226, 615, 956, 1309
Sau96I GGNCC 7 cut(s) 1160, 1210, 1379, 1380, 1442, 2169, 2462
SchI GAGTC 3 cut(s) 150, 942, 1780
ScrFI CCNGG 3 cut(s) 675, 781, 2030
SduI GDGCHC 4 cut(s) 97, 1383, 2148, 2650
SfaNI GCATC 4 cut(s) 26, 467, 1461, 2124
SfcI CTRYAG 2 cut(s) 88, 1339
SfuI TTCGAA 1 cut(s) 1036
SinI GGWCC 4 cut(s) 1160, 1210, 2169, 2462
SmiMI CAYNNNNRTG 4 cut(s) 102, 1763, 1894, 2516
SmlI CTYRAG 3 cut(s) 1855, 1975, 2308
SmoI CTYRAG 3 cut(s) 1855, 1975, 2308
SpeI ACTAGT 1 cut(s) 802
SphI GCATGC 1 cut(s) 1834
SsiI CCGC 5 cut(s) 15, 480, 1052, 1308, 2448
SstI GAGCTC 1 cut(s) 2148
StyD4I CCNGG 3 cut(s) 673, 779, 2028
StyI CCWWGG 4 cut(s) 609, 1560, 1677, 2579
TaqI TCGA 2 cut(s) 123, 1036
TatI WGTACW 1 cut(s) 1361
TauI GCSGC 1 cut(s) 1311
TfiI GAWTC 6 cut(s) 872, 1145, 1682, 1708, 2188, 2240
Tru1I TTAA 7 cut(s) 585, 639, 1043, 2094, 2370, 2493, 2659
Tru9I TTAA 7 cut(s) 585, 639, 1043, 2094, 2370, 2493, 2659
TscAI CASTG 7 cut(s) 97, 640, 1752, 1765, 1845, 2491, 2611
TseFI GTSAC 1 cut(s) 1201
TseI GCWGC 4 cut(s) 204, 225, 614, 955
Tsp45I GTSAC 1 cut(s) 1201
TspGWI ACGGA 2 cut(s) 1028, 2412
TspRI CASTG 7 cut(s) 97, 640, 1752, 1765, 1845, 2491, 2611
Van91I CCANNNNNTGG 1 cut(s) 2290
VneI GTGCAC 1 cut(s) 93
VpaK11BI GGWCC 4 cut(s) 1160, 1210, 2169, 2462
XagI CCTNNNNNAGG 4 cut(s) 315, 608, 1373, 2027
XapI RAATTY 5 cut(s) 839, 902, 1166, 1593, 2655
XbaI TCTAGA 1 cut(s) 397
XceI RCATGY 2 cut(s) 101, 1834
XcmI CCANNNNNNNNNTGG 1 cut(s) 1251
XmiI GTMKAC 2 cut(s) 1615, 2629
XmnI GAANNNNTTC 2 cut(s) 496, 2244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.