RchiOBHm_Chr5g0022541

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
16649280 .. 16652333
3054 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30248

Sequence Viewer

Length: 3054 bp
ATGGATAGCTTCTGTGCAAACCAATTCAAGCCTTCCGGCTATCGCTTCGTCATCAACAATGTTGCTCATTACTTGCTCTTTCTTTTTCTGGCATCTACATCTCTGCAGACTACTAAACTGTGTTTGGGAGATGGACTTCCCAGTGGTGTGAGATCATCATCATGCATCGAGGAAGAGAGACGAGCGCTTCTCAGCTTCAAAGGAGATGTTACTGATCGTTCCGGCAGGCTTTCTTCTTGGGTGGGTCAGGATTGCTGTCAATGGAAAGGGATTTCATGCAACAACCGTACAGGTCACGTTGTAAAGATGGACCTCCGGAACCTGAATTATGATGAAGGCTTCTACTGGGAGACTTCTTTGGGGGGTAAGATTAATCCTTCTTTGCTTAGCTTTAAGAACTTATATTACCTTGATCTAAGCGGAAACGATTTTCAAGGACGTCGAATTCCTAACTTCTTTGGGAAGCTTCAAAGTTTGAGGTATCTCAATCTCTCATATAATTCATTTGTGGGAGAGATTCCCCCAGCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAGTTCTGATTATTACAGTTATGTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAGTACCTCAATCTTGGAGGTGTGAACCTTAGCAGCACAGGAGTAAGTTGGCTACATGATGTCAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTGTTTGCCAAATTCAAAACCTTCCACACTACTCCCAGCTTCCGTCAGTGAACTTCACATCCCTATTGGTTCTTGATCTATCAGGGAATTCTATTAATTCTTCATTTCCCAGCTGGCTTTTTAATCTTACCAACCTCAAAAAACTTGATGTATCTAGCAACTGGTTCGCGGGTCACTTCCCTGTTGAAATTGCAAACCTCAAGTCTTTGGAAGACCTTCGTTTAAATAATGATTTTCTCCAAGGTCAAATTCCCAAAGTCATTGGTACTTTGTGCAGCCTAATTATATTAGATCTTTCGTCAAACTCGCTCAATGGTAGTTTGGAAAATGTTTTGAATGGCTTCTCAAACTGTACAAGTCATAGATTAGAGTCACTTGATTTATCTTACAATATTATGTTGGAAGGTGAATTGCCCACCGCCTTGGGAATGCTAGAAAATCTTATGGAACTTCATCTAAGTGGAAACCAATTTTCTGGTTCAATTCCTCAATCTATCGATAATTTATCATCCTTGGAAACACTAGACATCTCTGGTAATAATTTGACCGAGTCCATTCCTGAAAGTTTGGGACAACTTTCTCAGCTAGTTCACCTAGATCTATCTCAAAATTTGTGGGTAGGCATTATAACTGAAGCGCATTTCCGATCTCTCACAAAGTTGGAGTTCTTTGCAGTCAATACAGACCTACCTAGGTCCCTCATTTTTAACGTGGCTCATGACTGGGTTCCTCCTTTCCAGCTTGATTCAGTTGACATTGCCAACTGCAGAGCAGGTCCTGCCTTTGGGGTATGGCTTCAGTCTCAAACTGAATTAACGCATCTCAATCTTAGTAATACTGGAATCTCAGATTTCATACCAGAAGAGTGGTTCTTGAAGATATCTTTCCAACTCACATCGCTGGATTTATCTAACAACCAAATTCGTGGAAGGCTTCCATTTCACATGAACTTCCCATCTTTGGAGTATATAGATTTGAGTCATAATCAATTTGAGGGCCCTCTCCCACATTGGTCTAGTGATGCTGCCGCCTATCTCGATCTTCAAAGCAATTTATTTTCCGGGCCAATTCCCTCAAATTATGGTCAACTGTTGCCTAACTTGCTAAAATTGTATCTATCTGACAATCATCTGAATGGTAGTATACCACCCTCTTTGTGCAACATGTCAGGTCTATATATCTTTATGTTAAGAAGTAATCACTTGTCTGGAGAATTACCTCCAGCATGGAGTCTTTGGCGAGATATATGGGTTGTAGATGTCTCAGACAACAATTTGTCTGGCAATATCCCCAGTTCAATGGGTGTTCCGAGCTCACTATACGTATTGAATCTGAGGAACAACAATTTTGGGGGTCAGATTCCTTCTTCTCTCTTCCAAAACTGCAGCCACTTGCAGAGTATTGATCTTGGAGGCAATAGATTTACTGGAAGCATACCTTTACAGACAAGATCAATTGTATCATCTGAATTGTATATGCTAAGATTGCGATCCAACTCTTTAAGCGGACATATCCCCAATCGATTGTGCTCTCTTCAATCTCTTCATATCATAGACCTTGGCCACAACAAATTTTCAGGGACCATTCCCAAGTGTGTGTATAATCTGACTGCTTTGGCCTACGGTAATGACACTCGTACGTACTTTTTGTTAAATTATCTTGAGAAGACCAGCTTGACATTGAAGGGACAAGAACTCGTATATAACACCACTCTGAATTTGGTGAATACCATTGATCTCTCATCAAATAACTTAGAAGGTGTAATCCCTGAAGAAATAAGCAGTCTCATTGCATTGGGTACCTTGAACTTGTCAAGAAATCAGTTGAGTGGAAACATTCCTTCGAAGATTGGAAACTTGCGATGGCTGGAAACTCTTGATCTCTCACAAAATCACCTCTCCGGGCAGATTCCTCAAAGTTTCTCTTCATTAACCTCTTTGTCTCACTTGAACTTGTCTTTCAACAACTTGTCAGGCAGAATTCCTTCAGGCAACCAACTTCGAACACTCTATGATTCATCCATTTATGTTGGCAATCCATCCTTGTGTGGGGTTCCTCTTCCAACTGTCTGCCCGGGAGATGGCGCACTCGCACCAGCTGACCCTGACGATGGTGATCATAATGATGATGATACTGATGAGAATGGGAAGTTTGGTATCTATGTTAGCGCTGTCCTCGGCTTCATCATAGGCTTTTGGAGTGTTTGTGGCACATTGGTAATGAAGAAATCATGGAGGTATGCCTATTTTCGATTCTTTGATAACATACAGGAGAGGGCAGCATTAGCAATTGCATTGAGAGTGGCTCATTGGCAAAGGAAGACTTGA

Protein Analysis

1017

Amino Acids

112.95

Weight (kDa)

5.55

Isoelectric Point (pI)

40.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 57 - 94 1.3e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 123 - 191 3.8e-07 Leucine-rich repeat region
LRR_8 PF13855 133 - 190 3.2e-07 Leucine rich repeat
LRR_14 PF23598 202 - 371 1.5e-08 Leucine-rich repeat region
LRR_8 PF13855 364 - 424 2.1e-07 Leucine rich repeat
LRR_14 PF23598 365 - 567 1.8e-12 Leucine-rich repeat region
LRR_8 PF13855 389 - 446 4.2e-09 Leucine rich repeat
LRR_4 PF12799 539 - 573 2e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 825 - 900 2.6e-08 Leucine-rich repeat region
LRR_8 PF13855 860 - 899 1.4e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1355
AatII GACGTC 1 cut(s) 442
Acc36I ACCTGC 1 cut(s) 1490
Acc65I GGTACC 1 cut(s) 2525
AccB1I GGYRCC 1 cut(s) 2525
AccB7I CCANNNNNTGG 1 cut(s) 530
AccI GTMKAC 1 cut(s) 1870
AccII CGCG 1 cut(s) 896
AccIII TCCGGA 1 cut(s) 315
AciI CCGC 5 cut(s) 420, 896, 1146, 1755, 2232
AclWI GGATC 1 cut(s) 2211
AcoI YGGCCR 1 cut(s) 2287
AcsI RAATTY 9 cut(s) 444, 738, 814, 975, 1336, 1647, 2297, 2443, 2706
AcuI CTGAAG 4 cut(s) 1380, 1508, 2517, 2697
AcyI GRCGYC 1 cut(s) 439
AfaI GTAC 7 cut(s) 289, 635, 994, 1081, 2365, 2369, 2527
AfeI AGCGCT 2 cut(s) 186, 2896
AfiI CCNNNNNNNGG 6 cut(s) 530, 1511, 1687, 2775, 2807, 2837
AflIII ACRYGT 1 cut(s) 1890
AjuI GAANNNNNNNTTGG 2 cut(s) 960, 992
AloI GAACNNNNNNTCC 2 cut(s) 770, 802
Alw21I GWGCWC 2 cut(s) 2042, 2258
Alw26I GTCTC 6 cut(s) 172, 344, 1533, 1993, 2516, 2673
AlwI GGATC 1 cut(s) 2211
AlwNI CAGNNNCTG 1 cut(s) 1505
Ama87I CYCGRG 1 cut(s) 2800
Aor13HI TCCGGA 1 cut(s) 315
Aor51HI AGCGCT 2 cut(s) 186, 2896
AoxI GGCC 4 cut(s) 1723, 1790, 2287, 2343
ApaI GGGCCC 1 cut(s) 1727
ApeKI GCWGC 5 cut(s) 663, 1002, 1751, 2112, 3005
ApoI RAATTY 9 cut(s) 444, 738, 814, 975, 1336, 1647, 2297, 2443, 2706
ArsI GACNNNNNNTTYG 2 cut(s) 914, 946
AseI ATTAAT 2 cut(s) 372, 822
Asp700I GAANNNNTTC 3 cut(s) 942, 1067, 2710
Asp718I GGTACC 1 cut(s) 2525
AspA2I CCTAGG 1 cut(s) 1418
AspLEI GCGC 4 cut(s) 187, 1366, 2813, 2897
AspS9I GGNCC 7 cut(s) 310, 1422, 1502, 1723, 1724, 1790, 2307
AsuC2I CCSGG 4 cut(s) 1789, 2629, 2801, 2802
AsuHPI GGTGA 5 cut(s) 1145, 1310, 2461, 2612, 2852
AsuII TTCGAA 2 cut(s) 2570, 2728
AvaI CYCGRG 1 cut(s) 2800
AvaII GGWCC 4 cut(s) 310, 1422, 1502, 2307
AvrII CCTAGG 1 cut(s) 1418
BaeGI GKGCMC 1 cut(s) 1727
BalI TGGCCA 1 cut(s) 2289
BanI GGYRCC 1 cut(s) 2525
BanII GRGCYC 2 cut(s) 1727, 2042
BbsI GAAGAC 2 cut(s) 945, 2399
Bbv12I GWGCWC 2 cut(s) 2042, 2258
BbvI GCAGC 5 cut(s) 675, 1014, 1738, 2124, 3017
BccI CCATC 7 cut(s) 125, 301, 1690, 2583, 2773, 2801, 2831
BcgI CGANNNNNNTGC 2 cut(s) 874, 908
BclI TGATCA 1 cut(s) 2842
BcnI CCSGG 4 cut(s) 1789, 2629, 2801, 2802
BcoDI GTCTC 6 cut(s) 172, 344, 1533, 1993, 2516, 2673
BfaI CTAG 7 cut(s) 882, 1160, 1250, 1313, 1322, 1419, 1743
BfmI CTRYAG 3 cut(s) 104, 1492, 2110
BfoI RGCGCY 2 cut(s) 188, 2898
BfuAI ACCTGC 1 cut(s) 1490
BglII AGATCT 2 cut(s) 1018, 1324
BisI GCNGC 6 cut(s) 664, 1003, 1752, 1755, 2113, 3006
BlnI CCTAGG 1 cut(s) 1418
BlpI GCTNAGC 1 cut(s) 386
BlsI GCNGC 6 cut(s) 665, 1004, 1753, 1756, 2114, 3007
Bme1390I CCNGG 4 cut(s) 1789, 2629, 2801, 2802
Bme18I GGWCC 4 cut(s) 310, 1422, 1502, 2307
BmeT110I CYCGRG 1 cut(s) 2800
BmgT120I GGNCC 7 cut(s) 310, 1422, 1502, 1723, 1724, 1790, 2307
BmiI GGNNCC 7 cut(s) 320, 1424, 1455, 1725, 2308, 2527, 2781
BmrFI CCNGG 4 cut(s) 1789, 2629, 2801, 2802
BmrI ACTGGG 4 cut(s) 135, 355, 1459, 2013
BmsI GCATC 4 cut(s) 101, 174, 1555, 1738
BmuI ACTGGG 4 cut(s) 135, 355, 1459, 2013
BpiI GAAGAC 2 cut(s) 945, 2399
BplI GAGNNNNNCTC 4 cut(s) 174, 206, 3016, 3048
BpmI CTGGAG 2 cut(s) 1932, 1956
Bpu10I CCTNAGC 1 cut(s) 659
Bpu1102I GCTNAGC 1 cut(s) 386
Bpu14I TTCGAA 2 cut(s) 2570, 2728
BpuEI CTTGAG 2 cut(s) 911, 2408
BpuMI CCSGG 4 cut(s) 1789, 2629, 2801, 2802
Bsa29I ATCGAT 2 cut(s) 1224, 2248
BsaAI YACGTR 2 cut(s) 2050, 2367
BsaBI GATNNNNATC 3 cut(s) 157, 2215, 2841
BsaHI GRCGYC 1 cut(s) 439
BsaJI CCNNGG 7 cut(s) 967, 1149, 1239, 1418, 2284, 2800, 2902
BsaWI WCCGGW 1 cut(s) 315
BsaXI ACNNNNNCTCC 2 cut(s) 2917, 2947
Bsc4I CCNNNNNNNGG 6 cut(s) 530, 1511, 1687, 2775, 2807, 2837
Bse1I ACTGG 7 cut(s) 141, 350, 893, 1454, 1570, 2019, 2158
Bse3DI GCAATG 2 cut(s) 1482, 2514
Bse8I GATNNNNATC 3 cut(s) 157, 2215, 2841
BseAI TCCGGA 1 cut(s) 315
BseCI ATCGAT 2 cut(s) 1224, 2248
BseDI CCNNGG 7 cut(s) 967, 1149, 1239, 1418, 2284, 2800, 2902
BseGI GGATG 4 cut(s) 785, 1235, 2744, 2765
BseJI GATNNNNATC 3 cut(s) 157, 2215, 2841
BseLI CCNNNNNNNGG 6 cut(s) 530, 1511, 1687, 2775, 2807, 2837
BseMI GCAATG 2 cut(s) 1482, 2514
BseMII CTCAG 6 cut(s) 205, 577, 1322, 1587, 2004, 2051
BseNI ACTGG 7 cut(s) 141, 350, 893, 1454, 1570, 2019, 2158
BseSI GKGCMC 1 cut(s) 1727
BseXI GCAGC 5 cut(s) 675, 1014, 1738, 2124, 3017
BseYI CCCAGC 3 cut(s) 523, 762, 836
BsgI GTGCAG 1 cut(s) 1021
Bsh1236I CGCG 1 cut(s) 896
BshFI GGCC 4 cut(s) 1725, 1792, 2289, 2345
BshNI GGYRCC 1 cut(s) 2525
BshVI ATCGAT 2 cut(s) 1224, 2248
BsiHKAI GWGCWC 2 cut(s) 2042, 2258
BsiHKCI CYCGRG 1 cut(s) 2800
BsiSI CCGG 6 cut(s) 36, 222, 316, 1788, 2628, 2801
BsiWI CGTACG 1 cut(s) 2363
BslFI GGGAC 4 cut(s) 1311, 1408, 2320, 2427
BslI CCNNNNNNNGG 6 cut(s) 530, 1511, 1687, 2775, 2807, 2837
BsmAI GTCTC 6 cut(s) 172, 344, 1533, 1993, 2516, 2673
BsmBI CGTCTC 1 cut(s) 172
BsmFI GGGAC 4 cut(s) 1311, 1408, 2320, 2427
BsmI GAATGC 1 cut(s) 1161
BsnI GGCC 4 cut(s) 1725, 1792, 2289, 2345
BsoBI CYCGRG 1 cut(s) 2800
Bsp119I TTCGAA 2 cut(s) 2570, 2728
Bsp120I GGGCCC 1 cut(s) 1723
Bsp1286I GDGCHC 3 cut(s) 1727, 2042, 2258
Bsp13I TCCGGA 1 cut(s) 315
Bsp1407I TGTACA 1 cut(s) 1079
Bsp1720I GCTNAGC 1 cut(s) 386
BspACI CCGC 5 cut(s) 420, 896, 1146, 1755, 2232
BspANI GGCC 4 cut(s) 1725, 1792, 2289, 2345
BspCNI CTCAG 6 cut(s) 204, 576, 1321, 1586, 2003, 2052
BspDI ATCGAT 2 cut(s) 1224, 2248
BspEI TCCGGA 1 cut(s) 315
BspFNI CGCG 1 cut(s) 896
BspHI TCATGA 1 cut(s) 1444
BspLI GGNNCC 7 cut(s) 320, 1424, 1455, 1725, 2308, 2527, 2781
BspMAI CTGCAG 3 cut(s) 108, 1496, 2114
BspMI ACCTGC 1 cut(s) 1490
BspPI GGATC 1 cut(s) 2211
BspT104I TTCGAA 2 cut(s) 2570, 2728
BspT107I GGYRCC 1 cut(s) 2525
BsrDI GCAATG 2 cut(s) 1482, 2514
BsrGI TGTACA 1 cut(s) 1079
BsrI ACTGG 7 cut(s) 141, 350, 893, 1454, 1570, 2019, 2158
BssECI CCNNGG 7 cut(s) 967, 1149, 1239, 1418, 2284, 2800, 2902
BssNAI GTATAC 1 cut(s) 1871
BssNI GRCGYC 1 cut(s) 439
BssT1I CCWWGG 5 cut(s) 967, 1149, 1239, 1418, 2284
Bst1107I GTATAC 1 cut(s) 1871
Bst4CI ACNGT 7 cut(s) 120, 287, 581, 1079, 1818, 2351, 2794
Bst6I CTCTTC 8 cut(s) 168, 628, 1584, 2105, 2265, 2274, 2656, 2790
BstACI GRCGYC 1 cut(s) 439
BstAPI GCANNNNNTGC 1 cut(s) 1505
BstAUI TGTACA 1 cut(s) 1079
BstBAI YACGTR 2 cut(s) 2050, 2367
BstBI TTCGAA 2 cut(s) 2570, 2728
BstC8I GCNNGC 2 cut(s) 227, 842
BstEII GGTNACC 1 cut(s) 533
BstF5I GGATG 4 cut(s) 785, 1235, 2744, 2765
BstFNI CGCG 1 cut(s) 896
BstH2I RGCGCY 2 cut(s) 188, 2898
BstHHI GCGC 4 cut(s) 187, 1366, 2813, 2897
BstMAI GTCTC 6 cut(s) 172, 344, 1533, 1993, 2516, 2673
BstMWI GCNNNNNNNGC 4 cut(s) 1505, 1828, 2212, 3011
BstNSI RCATGY 2 cut(s) 700, 1894
BstPI GGTNACC 1 cut(s) 533
BstSCI CCNGG 4 cut(s) 1787, 2627, 2799, 2800
BstSFI CTRYAG 3 cut(s) 104, 1492, 2110
BstSLI GKGCMC 1 cut(s) 1727
BstSNI TACGTA 2 cut(s) 2050, 2367
BstUI CGCG 1 cut(s) 896
BstV1I GCAGC 5 cut(s) 675, 1014, 1738, 2124, 3017
BstV2I GAAGAC 2 cut(s) 945, 2399
BstX2I RGATCY 2 cut(s) 1018, 1324
BstXI CCANNNNNNTGG 5 cut(s) 1150, 1202, 1593, 1652, 2026
BstYI RGATCY 2 cut(s) 1018, 1324
BstZ17I GTATAC 1 cut(s) 1871
Bsu15I ATCGAT 2 cut(s) 1224, 2248
BsuRI GGCC 4 cut(s) 1725, 1792, 2289, 2345
BsuTUI ATCGAT 2 cut(s) 1224, 2248
BtgZI GCGATG 2 cut(s) 1608, 2602
BtsCI GGATG 4 cut(s) 785, 1235, 2744, 2765
BtsIMutI CAGTG 2 cut(s) 148, 780
BveI ACCTGC 1 cut(s) 1490
Cac8I GCNNGC 2 cut(s) 227, 842
CaiI CAGNNNCTG 1 cut(s) 1505
CciI TCATGA 1 cut(s) 1444
CfoI GCGC 4 cut(s) 187, 1366, 2813, 2897
Cfr13I GGNCC 7 cut(s) 310, 1422, 1502, 1723, 1724, 1790, 2307
Cfr9I CCCGGG 1 cut(s) 2800
ClaI ATCGAT 2 cut(s) 1224, 2248
Csp6I GTAC 7 cut(s) 288, 634, 993, 1080, 2364, 2368, 2526
CspCI CAANNNNNGTGG 4 cut(s) 1322, 1357, 1863, 1898
CviAII CATG 9 cut(s) 162, 276, 686, 697, 1445, 1672, 1891, 1953, 2958
CviQI GTAC 7 cut(s) 288, 634, 993, 1080, 2364, 2368, 2526
DraI TTTAAA 1 cut(s) 951
EaeI YGGCCR 1 cut(s) 2287
Eam1104I CTCTTC 8 cut(s) 168, 628, 1584, 2105, 2265, 2274, 2656, 2790
EarI CTCTTC 8 cut(s) 168, 628, 1584, 2105, 2265, 2274, 2656, 2790
Ecl136II GAGCTC 1 cut(s) 2040
Eco105I TACGTA 2 cut(s) 2050, 2367
Eco130I CCWWGG 5 cut(s) 967, 1149, 1239, 1418, 2284
Eco24I GRGCYC 2 cut(s) 1727, 2042
Eco32I GATATC 1 cut(s) 1608
Eco47I GGWCC 4 cut(s) 310, 1422, 1502, 2307
Eco47III AGCGCT 2 cut(s) 186, 2896
Eco53kI GAGCTC 1 cut(s) 2040
Eco57I CTGAAG 4 cut(s) 1380, 1508, 2517, 2697
Eco88I CYCGRG 1 cut(s) 2800
Eco91I GGTNACC 1 cut(s) 533
EcoICRI GAGCTC 1 cut(s) 2040
EcoO109I RGGNCCY 4 cut(s) 1422, 1502, 1723, 1724
EcoO65I GGTNACC 1 cut(s) 533
EcoRI GAATTC 3 cut(s) 444, 814, 2706
EcoRV GATATC 1 cut(s) 1608
EcoT14I CCWWGG 5 cut(s) 967, 1149, 1239, 1418, 2284
EcoT22I ATGCAT 1 cut(s) 167
EcoT38I GRGCYC 2 cut(s) 1727, 2042
ErhI CCWWGG 5 cut(s) 967, 1149, 1239, 1418, 2284
Esp3I CGTCTC 1 cut(s) 172
FaeI CATG 9 cut(s) 165, 279, 689, 700, 1448, 1675, 1894, 1956, 2961
FalI AAGNNNNNCTT 7 cut(s) 2149, 2181, 2384, 2416, 2635, 2667, 3034
FaqI GGGAC 4 cut(s) 1311, 1408, 2320, 2427
FatI CATG 9 cut(s) 161, 275, 685, 696, 1444, 1671, 1890, 1952, 2957
FauI CCCGC 1 cut(s) 889
FbaI TGATCA 1 cut(s) 2842
FblI GTMKAC 1 cut(s) 1870
Fnu4HI GCNGC 6 cut(s) 664, 1003, 1752, 1755, 2113, 3006
FokI GGATG 4 cut(s) 772, 1222, 2731, 2752
FriOI GRGCYC 2 cut(s) 1727, 2042
Fsp4HI GCNGC 6 cut(s) 664, 1003, 1752, 1755, 2113, 3006
FspBI CTAG 7 cut(s) 882, 1160, 1250, 1313, 1322, 1419, 1743
GlaI GCGC 4 cut(s) 186, 1365, 2812, 2896
GluI GCNGC 6 cut(s) 664, 1003, 1752, 1755, 2113, 3006
GsaI CCCAGC 3 cut(s) 527, 766, 840
GsuI CTGGAG 2 cut(s) 1932, 1956
HaeII RGCGCY 2 cut(s) 188, 2898
HaeIII GGCC 4 cut(s) 1725, 1792, 2289, 2345
HapII CCGG 6 cut(s) 36, 222, 316, 1788, 2628, 2801
HhaI GCGC 4 cut(s) 187, 1366, 2813, 2897
Hin1I GRCGYC 1 cut(s) 439
Hin1II CATG 9 cut(s) 165, 279, 689, 700, 1448, 1675, 1894, 1956, 2961
Hin6I GCGC 4 cut(s) 185, 1364, 2811, 2895
HinP1I GCGC 4 cut(s) 185, 1364, 2811, 2895
HincII GTYRAC 3 cut(s) 694, 1480, 1814
HindII GTYRAC 3 cut(s) 694, 1480, 1814
HindIII AAGCTT 1 cut(s) 464
HpaII CCGG 6 cut(s) 36, 222, 316, 1788, 2628, 2801
HphI GGTGA 5 cut(s) 1145, 1310, 2461, 2612, 2852
Hpy166II GTNNAC 7 cut(s) 655, 694, 778, 1318, 1480, 1814, 1871
Hpy8I GTNNAC 7 cut(s) 655, 694, 778, 1318, 1480, 1814, 1871
Hpy99I CGWCG 1 cut(s) 444
HpyCH4III ACNGT 7 cut(s) 120, 287, 581, 1079, 1818, 2351, 2794
HpyCH4IV ACGT 5 cut(s) 297, 439, 1437, 2049, 2366
HpyF10VI GCNNNNNNNGC 4 cut(s) 1505, 1828, 2212, 3011
HpySE526I ACGT 5 cut(s) 297, 439, 1437, 2049, 2366
Hsp92I GRCGYC 1 cut(s) 439
Hsp92II CATG 9 cut(s) 165, 279, 689, 700, 1448, 1675, 1894, 1956, 2961
HspAI GCGC 4 cut(s) 185, 1364, 2811, 2895
Kpn2I TCCGGA 1 cut(s) 315
KpnI GGTACC 1 cut(s) 2529
Ksp22I TGATCA 1 cut(s) 2842
Lsp1109I GCAGC 5 cut(s) 675, 1014, 1738, 2124, 3017
LweI GCATC 4 cut(s) 101, 174, 1555, 1738
MaeI CTAG 7 cut(s) 882, 1160, 1250, 1313, 1322, 1419, 1743
MaeII ACGT 5 cut(s) 297, 439, 1437, 2049, 2366
MaeIII GTNAC 5 cut(s) 208, 293, 533, 899, 1098
MfeI CAATTG 2 cut(s) 2181, 3015
MflI RGATCY 2 cut(s) 1018, 1324
MhlI GDGCHC 3 cut(s) 1727, 2042, 2258
MlsI TGGCCA 1 cut(s) 2289
MluNI TGGCCA 1 cut(s) 2289
MlyI GAGTC 4 cut(s) 1106, 1286, 1714, 1966
MmeI TCCRAC 5 cut(s) 1107, 1368, 1639, 2244, 2813
Mox20I TGGCCA 1 cut(s) 2289
Mph1103I ATGCAT 1 cut(s) 167
MroI TCCGGA 1 cut(s) 315
MroXI GAANNNNTTC 3 cut(s) 942, 1067, 2710
MscI TGGCCA 1 cut(s) 2289
MslI CAYNNNNRTG 5 cut(s) 160, 1185, 1860, 2770, 2850
Msp20I TGGCCA 1 cut(s) 2289
MspA1I CMGCKG 2 cut(s) 840, 2825
MspI CCGG 6 cut(s) 36, 222, 316, 1788, 2628, 2801
MspR9I CCNGG 4 cut(s) 1789, 2629, 2801, 2802
MunI CAATTG 2 cut(s) 2181, 3015
Mva1269I GAATGC 1 cut(s) 1161
MvnI CGCG 1 cut(s) 896
MwoI GCNNNNNNNGC 4 cut(s) 1505, 1828, 2212, 3011
NciI CCSGG 4 cut(s) 1789, 2629, 2801, 2802
NlaIII CATG 9 cut(s) 165, 279, 689, 700, 1448, 1675, 1894, 1956, 2961
NlaIV GGNNCC 7 cut(s) 320, 1424, 1455, 1725, 2308, 2527, 2781
NmeAIII GCCGAG 1 cut(s) 2883
NmuCI GTSAC 3 cut(s) 293, 899, 1098
NsiI ATGCAT 1 cut(s) 167
NspI RCATGY 2 cut(s) 700, 1894
NspV TTCGAA 2 cut(s) 2570, 2728
PagI TCATGA 1 cut(s) 1444
PciI ACATGT 1 cut(s) 1890
PctI GAATGC 1 cut(s) 1161
PdmI GAANNNNTTC 3 cut(s) 942, 1067, 2710
PfeI GAWTC 8 cut(s) 517, 1472, 1569, 2056, 2086, 2635, 2741, 2979
Pfl23II CGTACG 1 cut(s) 2363
PflFI GACNNNGTC 1 cut(s) 1276
PflMI CCANNNNNTGG 1 cut(s) 530
PkrI GCNGC 6 cut(s) 665, 1004, 1753, 1756, 2114, 3007
PleI GAGTC 4 cut(s) 1105, 1285, 1713, 1965
PpsI GAGTC 4 cut(s) 1105, 1285, 1713, 1965
Ppu21I YACGTR 2 cut(s) 2050, 2367
PpuMI RGGWCCY 2 cut(s) 1422, 1502
PscI ACATGT 1 cut(s) 1890
PshBI ATTAAT 2 cut(s) 372, 822
PsiI TTATAA 1 cut(s) 1355
Psp124BI GAGCTC 1 cut(s) 2042
Psp5II RGGWCCY 2 cut(s) 1422, 1502
PspEI GGTNACC 1 cut(s) 533
PspFI CCCAGC 3 cut(s) 523, 762, 836
PspLI CGTACG 1 cut(s) 2363
PspN4I GGNNCC 7 cut(s) 320, 1424, 1455, 1725, 2308, 2527, 2781
PspOMI GGGCCC 1 cut(s) 1723
PspPI GGNCC 7 cut(s) 310, 1422, 1502, 1723, 1724, 1790, 2307
PspPPI RGGWCCY 2 cut(s) 1422, 1502
PsrI GAACNNNNNNTAC 2 cut(s) 389, 421
PstI CTGCAG 3 cut(s) 108, 1496, 2114
PstNI CAGNNNCTG 1 cut(s) 1505
PsuI RGATCY 2 cut(s) 1018, 1324
PsyI GACNNNGTC 1 cut(s) 1276
PvuII CAGCTG 2 cut(s) 840, 2825
RsaI GTAC 7 cut(s) 289, 635, 994, 1081, 2365, 2369, 2527
RsaNI GTAC 7 cut(s) 288, 634, 993, 1080, 2364, 2368, 2526
RseI CAYNNNNRTG 5 cut(s) 160, 1185, 1860, 2770, 2850
SacI GAGCTC 1 cut(s) 2042
SatI GCNGC 6 cut(s) 664, 1003, 1752, 1755, 2113, 3006
Sau96I GGNCC 7 cut(s) 310, 1422, 1502, 1723, 1724, 1790, 2307
SchI GAGTC 4 cut(s) 1106, 1286, 1714, 1966
ScrFI CCNGG 4 cut(s) 1789, 2629, 2801, 2802
SduI GDGCHC 3 cut(s) 1727, 2042, 2258
SfaNI GCATC 4 cut(s) 101, 174, 1555, 1738
SfcI CTRYAG 3 cut(s) 104, 1492, 2110
SfuI TTCGAA 2 cut(s) 2570, 2728
SinI GGWCC 4 cut(s) 310, 1422, 1502, 2307
SmaI CCCGGG 1 cut(s) 2802
SmiMI CAYNNNNRTG 5 cut(s) 160, 1185, 1860, 2770, 2850
SmlI CTYRAG 2 cut(s) 926, 2387
SmoI CTYRAG 2 cut(s) 926, 2387
SnaBI TACGTA 2 cut(s) 2050, 2367
SsiI CCGC 5 cut(s) 420, 896, 1146, 1755, 2232
SspI AATATT 1 cut(s) 1120
SspMI CTAG 7 cut(s) 882, 1160, 1250, 1313, 1322, 1419, 1743
SstI GAGCTC 1 cut(s) 2042
StyD4I CCNGG 4 cut(s) 1787, 2627, 2799, 2800
StyI CCWWGG 5 cut(s) 967, 1149, 1239, 1418, 2284
TaaI ACNGT 7 cut(s) 120, 287, 581, 1079, 1818, 2351, 2794
TaiI ACGT 5 cut(s) 300, 442, 1440, 2052, 2369
TaqI TCGA 8 cut(s) 168, 442, 1224, 1764, 2248, 2570, 2728, 2977
TaqII GACCGA 1 cut(s) 1289
TatI WGTACW 1 cut(s) 1079
TauI GCSGC 1 cut(s) 1757
TfiI GAWTC 8 cut(s) 517, 1472, 1569, 2056, 2086, 2635, 2741, 2979
TscAI CASTG 2 cut(s) 148, 780
TseFI GTSAC 3 cut(s) 293, 899, 1098
TseI GCWGC 5 cut(s) 663, 1002, 1751, 2112, 3005
Tsp45I GTSAC 3 cut(s) 293, 899, 1098
TspGWI ACGGA 1 cut(s) 759
TspMI CCCGGG 1 cut(s) 2800
TspRI CASTG 2 cut(s) 148, 780
Tth111I GACNNNGTC 1 cut(s) 1276
Van91I CCANNNNNTGG 1 cut(s) 530
VpaK11BI GGWCC 4 cut(s) 310, 1422, 1502, 2307
VspI ATTAAT 2 cut(s) 372, 822
XapI RAATTY 9 cut(s) 444, 738, 814, 975, 1336, 1647, 2297, 2443, 2706
XceI RCATGY 2 cut(s) 700, 1894
XcmI CCANNNNNNNNNTGG 1 cut(s) 2443
XmaI CCCGGG 1 cut(s) 2800
XmaJI CCTAGG 1 cut(s) 1418
XmiI GTMKAC 1 cut(s) 1870
XmnI GAANNNNTTC 3 cut(s) 942, 1067, 2710
XspI CTAG 7 cut(s) 882, 1160, 1250, 1313, 1322, 1419, 1743
ZraI GACGTC 1 cut(s) 440
Zsp2I ATGCAT 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.