Rw1G000880

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
1262117 .. 1265137
3021 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G000880.1

Sequence Viewer

Length: 3021 bp
ATGGATATCGATGTTTACTTTAACCCTATCTCTCGCCTCATTCTTCACTTCTTGCTCTTGTTATTTTTTGCATCTTCGTGCCTAAACAATAGCAGTGTCGTGGTGGAATCATGCATGGAGGAAGAGAGGCGAGCACTTCTCAGCTTTAAACAACATCTCAGTGATCCTTCTGGTAAGCTTTCTTCTTGGGCTGGTCACGAATGCTGCCAATGGACAGGGATTTCATGCAACAACCGCACTGGTCATGTTGCAACGGTTGACCTCCGTAATACATATCCAGACACCACTAGTGATGATCAGTGGAACACCACGGAGTATGAAGAATCTTGTTTGGGGGGTAAGTTAATTAATCCTTCTTTGCTTGGCTTGAAACATTTGAGTTACTTAGACTTGAGCTCGAATAATTTTCAAGGGACTCACATTCCCAAGTTTATTGGGGAGCTTACAAGTCTGAGATATCTCAATTTTTCAAGTACCCAGTCTTTGAATTCAGTTGTGGGAGAGATTCCTTCTTCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAGTTCTCCTTATTATTCTCATCTCTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTGGAGGTGTAAACCTTAGCAGCACAGAAGTTGGTTGGCTACATGAGGTTAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTAGTTGCTACATTGGTGGAAACCAGCTTCCACTCTCCATGCCTACAATTAACTTCACATCACTTTTGGTCCTTGATATGTCATCGAATAGTATTGATTTTTCATATCCTAACTGGATGTTTAATCTCACTAGCCTTACAAAAGTTGATCTGAGTGGGAATTCTGTCAGTGGCCCCTTTCTTGATGAATTTGGAAGACTCAAATCTCTAGAACACCTTGACTTAGAGGGTGTAGGACTCAAAGGTCAATTTCCCAAATTTAGTGGAAATTTGTGTAGGCTCAAGTCATTAAGCCTTGCATCGAATCAAATTGATGTGGGGATTGAAGAGTTTTTGAGTGGTTTCTCAAATTGTTCATTTAATAGAATGGAGTCACTAGATTTGTATTTCTGTGGGTTGGTAGGCAAATTGCCTAGTTCGTTGGGAATGCTGAGAAGCCTGCAGCATCTCTTTCTCAGCTCCAACTCTTTTCGGGGATCCGTTCCAGAATTTATTATCAGCAATTTATCATCCTCCCTGAAGACACTTGATCTATCTGATAATGTTTTCAACGGTCCCATTCCTCAAAGTTTGGGAAAAGTTTCTCAGCTAGTGAGCCTTGATCTATCTGATAATATTTTCAACGGTCCCATTCCTCAAAGTTTGGGAAAAGTTTCTCAGCTAGTGAGCCTTGATCTATCTCATAATATTTTCAACGGTTCCATTCCTCAAAGTTTGGGAAAACTTTCTCAGCTAGTGAGCCTTGATCTATCTTATAATTCATGGGAAGGCAATTTAACCGAAGCCCATTTCATAAATCTCACAAAATTAGAGTCTTTTGCAGTTAGCACAGCCCAACCTAGGCCCATCATTTTCAATTTGATTGATTATGAATGGATTCCTCCTTTCAAGCTCCACCACATTGAAATGCACAACTGCCGAGTAGGCCCCGGCTTCCCTGTATGGCTTCAATCTCAAACTGAGCTCATGTGGGTCTCACTTGAGAATGCTGGACTCTCGGGTGTAATACCAGAGGAATGGCTCTTCAAGATATCTTCCCAGATCCAGTGGTTGGATTTATCTTCCAATCAAATAAGCGGAAAGCTTCCGTTCCGATTCAACTCTTTTCCGAATCTGGGTTCCATAGTTTTGAGCCATAATCAATTTGATGGCACTATTCCATCATCTATTTTTAGCATTCAATCTCTATTGTACCTTGCTCTGAATAACAATCAGTTGTTCGGAGAATTCCCTAAAGAATGGAGTTTGTGGAGCAACATAGAATTTGTGGATGTCTCAAACAACAATATGTCTGGTAGCTCAATGAGCATTCCAAGTTGTCTTAGAATACTAAAGATAGACAACAATCAATTTAGCGGAGAAATTCCTTCTGCCTTGCAAAATTGCTCAGATTTGGAGAGACTTTATCTTGGACGCAACAAATTTACTGGAAGCATACCTTCTTGGATAGGATCAATGGGATCCACATTAACAGTGCTGCAATTGCAATCAAACTCTTTAAGTGGACATATTCCTCATCATTTGTGCAGTCTATCTTCCGTTCAAATCCTAGACCTTAGTCACAATAGATTTTCAGGGACTATTCCCAACTGTTTGAATGGATTGATTGCTTTAATCTATGCAAGGGATCGGGGCTGGGCCTACTCTGGTGCTTTTGAGGCAATAACTGTGACCGTAAAAGGAAGAGCAAGTGAATACTTCTCTAGTAGTGGGATGCCTCTAACCATTATTGATTTTTCGCATAATAATTTAGAAGGTGAAATTCCTGAAGAAATCAGCAGTCTCGTTCAATTAACTACATTAAACTTGTCCATTAATCAATTAAGAGGAAATATCCCCTCAGAAATTGGAAACTTGCAGTTGCTTGAAACACTTGACCTCTCCCAGAACCAACTTTTAGGACAGATTCCACAAAGTCTCGCTTCTCTGACCTTCTTATCTCACTTGAACTTGTCTTACAACAAGTTGACCGGAAGAATTCCTTCAGGCAACCAACTTCAGACGCTCGATGATTCATCTATTTATGAGGGCAATCCTTCACTATGTGGATTTCCTCTTTCAAATTGCACAGAAGATGGAGGCAACATGCATGAGCCTCAGCATGAGCCTCATGAAGCTAATGATGAAAAGCTTGGTTTATATACCAGCGCGGTGCTTGGCTTTATCATAGGCTTTTGGAGTGTTTGTGGCACATTGATATTGAAGAAATCATGGAGGTATGCTTATTTTCAATTTTTTGACCACATCAAAGAGAAAGTAGCACTAGCAATTGCATTGAAAGTAGCTCGTTTGAAAGCAAGGCAGTGA

Protein Analysis

1006

Amino Acids

111.39

Weight (kDa)

5.47

Isoelectric Point (pI)

42.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 77 5.4e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 118 - 193 1e-06 Leucine-rich repeat region
LRR_14 PF23598 192 - 341 6.2e-08 Leucine-rich repeat region
LRR_14 PF23598 357 - 559 1.3e-12 Leucine-rich repeat region
LRR_14 PF23598 821 - 912 2.1e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1470
AasI GACNNNNNNGTC 1 cut(s) 957
AccB7I CCANNNNNTGG 1 cut(s) 1765
AccII CGCG 1 cut(s) 2864
AciI CCGC 4 cut(s) 235, 1791, 2070, 2864
AclWI GGATC 8 cut(s) 158, 1185, 1198, 1750, 2169, 2173, 2182, 2349
AcuI CTGAAG 4 cut(s) 1253, 2502, 2682, 2696
AdeI CACNNNGTG 1 cut(s) 2759
AfaI GTAC 2 cut(s) 475, 1907
AfiI CCNNNNNNNGG 3 cut(s) 1554, 1765, 1829
AhlI ACTAGT 1 cut(s) 287
Alw21I GWGCWC 3 cut(s) 136, 398, 1680
Alw26I GTCTC 5 cut(s) 1693, 1993, 2107, 2501, 2636
AlwI GGATC 8 cut(s) 158, 1185, 1198, 1750, 2169, 2173, 2182, 2349
Ama87I CYCGRG 1 cut(s) 1711
AoxI GGCC 4 cut(s) 886, 1556, 1639, 2352
ApeKI GCWGC 4 cut(s) 204, 651, 1156, 2191
ArsI GACNNNNNNTTYG 2 cut(s) 1511, 1543
AseI ATTAAT 2 cut(s) 348, 2529
Asp700I GAANNNNTTC 5 cut(s) 1294, 1366, 1438, 1590, 2695
AspA2I CCTAGG 1 cut(s) 1553
AspLEI GCGC 1 cut(s) 2864
AspS9I GGNCC 7 cut(s) 784, 887, 1268, 1340, 1557, 1640, 2352
AsuC2I CCSGG 1 cut(s) 1644
AsuHPI GGTGA 1 cut(s) 2483
AvaI CYCGRG 1 cut(s) 1711
AvaII GGWCC 3 cut(s) 784, 1268, 1340
AvrII CCTAGG 1 cut(s) 1553
BamHI GGATCC 2 cut(s) 1190, 2174
BanII GRGCYC 2 cut(s) 398, 1680
BarI GAAGNNNNNNTAC 2 cut(s) 166, 198
BbsI GAAGAC 2 cut(s) 916, 1241
Bbv12I GWGCWC 3 cut(s) 136, 398, 1680
BbvCI CCTCAGC 1 cut(s) 2811
BbvI GCAGC 4 cut(s) 191, 663, 1168, 2178
BccI CCATC 4 cut(s) 1568, 1856, 1882, 2783
BclI TGATCA 1 cut(s) 295
BcnI CCSGG 1 cut(s) 1644
BcoDI GTCTC 5 cut(s) 1693, 1993, 2107, 2501, 2636
BcuI ACTAGT 1 cut(s) 287
BfmI CTRYAG 1 cut(s) 1154
BglI GCCNNNNNGGC 1 cut(s) 1638
BisI GCNGC 4 cut(s) 205, 652, 1157, 2192
BlnI CCTAGG 1 cut(s) 1553
BlsI GCNGC 4 cut(s) 206, 653, 1158, 2193
Bme1390I CCNGG 1 cut(s) 1644
Bme18I GGWCC 3 cut(s) 784, 1268, 1340
BmeT110I CYCGRG 1 cut(s) 1711
BmgT120I GGNCC 7 cut(s) 784, 887, 1268, 1340, 1557, 1640, 2352
BmiI GGNNCC 8 cut(s) 889, 1192, 1270, 1342, 1414, 1642, 1834, 2176
BmrFI CCNGG 1 cut(s) 1644
BmrI ACTGGG 1 cut(s) 472
BmsI GCATC 4 cut(s) 80, 1022, 1168, 2418
BmuI ACTGGG 1 cut(s) 472
BoxI GACNNNNGTC 1 cut(s) 2271
BpiI GAAGAC 2 cut(s) 916, 1241
BplI GAGNNNNNCTC 2 cut(s) 123, 155
Bpu10I CCTNAGC 2 cut(s) 647, 2811
BpuEI CTTGAG 3 cut(s) 412, 980, 1715
BpuMI CCSGG 1 cut(s) 1644
Bsa29I ATCGAT 1 cut(s) 9
BsaI GGTCTC 1 cut(s) 1693
BsaJI CCNNGG 3 cut(s) 309, 1553, 1642
BsaWI WCCGGW 1 cut(s) 2684
BsaXI ACNNNNNCTCC 2 cut(s) 2884, 2914
Bsc4I CCNNNNNNNGG 3 cut(s) 1554, 1765, 1829
Bse1I ACTGG 5 cut(s) 244, 478, 833, 1759, 2146
BseCI ATCGAT 1 cut(s) 9
BseDI CCNNGG 3 cut(s) 309, 1553, 1642
BseGI GGATG 4 cut(s) 837, 1223, 1990, 2433
BseLI CCNNNNNNNGG 3 cut(s) 1554, 1765, 1829
BseNI ACTGG 5 cut(s) 244, 478, 833, 1759, 2146
BseXI GCAGC 4 cut(s) 191, 663, 1168, 2178
BseYI CCCAGC 1 cut(s) 2349
BsgI GTGCAG 1 cut(s) 2260
Bsh1236I CGCG 1 cut(s) 2864
BshFI GGCC 4 cut(s) 888, 1558, 1641, 2354
BshVI ATCGAT 1 cut(s) 9
BsiHKAI GWGCWC 3 cut(s) 136, 398, 1680
BsiHKCI CYCGRG 1 cut(s) 1711
BsiSI CCGG 2 cut(s) 1644, 2685
BslFI GGGAC 4 cut(s) 427, 1254, 1326, 2305
BslI CCNNNNNNNGG 3 cut(s) 1554, 1765, 1829
BsmAI GTCTC 5 cut(s) 1693, 1993, 2107, 2501, 2636
BsmFI GGGAC 4 cut(s) 427, 1254, 1326, 2305
BsmI GAATGC 5 cut(s) 206, 1146, 1705, 1890, 2022
BsnI GGCC 4 cut(s) 888, 1558, 1641, 2354
Bso31I GGTCTC 1 cut(s) 1693
BsoBI CYCGRG 1 cut(s) 1711
Bsp1286I GDGCHC 3 cut(s) 136, 398, 1680
BspACI CCGC 4 cut(s) 235, 1791, 2070, 2864
BspANI GGCC 4 cut(s) 888, 1558, 1641, 2354
BspDI ATCGAT 1 cut(s) 9
BspFNI CGCG 1 cut(s) 2864
BspHI TCATGA 1 cut(s) 2824
BspLI GGNNCC 8 cut(s) 889, 1192, 1270, 1342, 1414, 1642, 1834, 2176
BspMAI CTGCAG 1 cut(s) 1158
BspPI GGATC 8 cut(s) 158, 1185, 1198, 1750, 2169, 2173, 2182, 2349
BspQI GCTCTTC 2 cut(s) 1742, 2392
BspTNI GGTCTC 1 cut(s) 1693
BsrI ACTGG 5 cut(s) 244, 478, 833, 1759, 2146
BssECI CCNNGG 3 cut(s) 309, 1553, 1642
BssT1I CCWWGG 1 cut(s) 1553
Bst4CI ACNGT 8 cut(s) 256, 1268, 1340, 1412, 2188, 2306, 2383, 2389
Bst6I CTCTTC 6 cut(s) 117, 583, 616, 1035, 1742, 2392
BstC8I GCNNGC 2 cut(s) 132, 1154
BstDSI CCRYGG 1 cut(s) 309
BstEII GGTNACC 1 cut(s) 521
BstF5I GGATG 4 cut(s) 837, 1223, 1990, 2433
BstFNI CGCG 1 cut(s) 2864
BstHHI GCGC 1 cut(s) 2864
BstMAI GTCTC 5 cut(s) 1693, 1993, 2107, 2501, 2636
BstMWI GCNNNNNNNGC 5 cut(s) 234, 1638, 2019, 2197, 2372
BstNSI RCATGY 2 cut(s) 688, 2803
BstPAI GACNNNNGTC 1 cut(s) 2271
BstPI GGTNACC 1 cut(s) 521
BstSCI CCNGG 1 cut(s) 1642
BstSFI CTRYAG 1 cut(s) 1154
BstUI CGCG 1 cut(s) 2864
BstV1I GCAGC 4 cut(s) 191, 663, 1168, 2178
BstV2I GAAGAC 2 cut(s) 916, 1241
BstX2I RGATCY 3 cut(s) 1190, 1755, 2174
BstXI CCANNNNNNTGG 1 cut(s) 1731
BstYI RGATCY 3 cut(s) 1190, 1755, 2174
Bsu15I ATCGAT 1 cut(s) 9
BsuRI GGCC 4 cut(s) 888, 1558, 1641, 2354
BsuTUI ATCGAT 1 cut(s) 9
BtgI CCRYGG 1 cut(s) 309
BtsCI GGATG 4 cut(s) 837, 1223, 1990, 2433
BtsI GCAGTG 1 cut(s) 100
BtsIMutI CAGTG 7 cut(s) 100, 166, 237, 305, 889, 1766, 2193
Cac8I GCNNGC 2 cut(s) 132, 1154
CciI TCATGA 1 cut(s) 2824
CfoI GCGC 1 cut(s) 2864
Cfr13I GGNCC 7 cut(s) 784, 887, 1268, 1340, 1557, 1640, 2352
ClaI ATCGAT 1 cut(s) 9
CseI GACGC 2 cut(s) 2136, 2725
Csp6I GTAC 2 cut(s) 474, 1906
CspCI CAANNNNNGTGG 2 cut(s) 958, 993
CviQI GTAC 2 cut(s) 474, 1906
DraI TTTAAA 1 cut(s) 148
DraIII CACNNNGTG 1 cut(s) 2759
DrdI GACNNNNNNGTC 1 cut(s) 957
DseDI GACNNNNNNGTC 1 cut(s) 957
Eam1104I CTCTTC 6 cut(s) 117, 583, 616, 1035, 1742, 2392
EarI CTCTTC 6 cut(s) 117, 583, 616, 1035, 1742, 2392
Ecl136II GAGCTC 2 cut(s) 396, 1678
Eco130I CCWWGG 1 cut(s) 1553
Eco24I GRGCYC 2 cut(s) 398, 1680
Eco31I GGTCTC 1 cut(s) 1693
Eco32I GATATC 3 cut(s) 7, 458, 1746
Eco47I GGWCC 3 cut(s) 784, 1268, 1340
Eco53kI GAGCTC 2 cut(s) 396, 1678
Eco57I CTGAAG 4 cut(s) 1253, 2502, 2682, 2696
Eco88I CYCGRG 1 cut(s) 1711
Eco91I GGTNACC 1 cut(s) 521
EcoICRI GAGCTC 2 cut(s) 396, 1678
EcoO109I RGGNCCY 1 cut(s) 1640
EcoO65I GGTNACC 1 cut(s) 521
EcoRI GAATTC 4 cut(s) 487, 874, 1940, 2691
EcoRV GATATC 3 cut(s) 7, 458, 1746
EcoT14I CCWWGG 1 cut(s) 1553
EcoT22I ATGCAT 2 cut(s) 116, 2805
EcoT38I GRGCYC 2 cut(s) 398, 1680
ErhI CCWWGG 1 cut(s) 1553
FalI AAGNNNNNCTT 6 cut(s) 2137, 2169, 2620, 2652, 2680, 2712
FaqI GGGAC 4 cut(s) 427, 1254, 1326, 2305
FbaI TGATCA 1 cut(s) 295
Fnu4HI GCNGC 4 cut(s) 205, 652, 1157, 2192
FokI GGATG 4 cut(s) 844, 1210, 1997, 2440
FriOI GRGCYC 2 cut(s) 398, 1680
Fsp4HI GCNGC 4 cut(s) 205, 652, 1157, 2192
GlaI GCGC 1 cut(s) 2863
GluI GCNGC 4 cut(s) 205, 652, 1157, 2192
GsaI CCCAGC 1 cut(s) 2353
HaeIII GGCC 4 cut(s) 888, 1558, 1641, 2354
HapII CCGG 2 cut(s) 1644, 2685
HgaI GACGC 2 cut(s) 2136, 2725
HhaI GCGC 1 cut(s) 2864
Hin6I GCGC 1 cut(s) 2862
HinP1I GCGC 1 cut(s) 2862
HincII GTYRAC 3 cut(s) 259, 682, 2682
HindII GTYRAC 3 cut(s) 259, 682, 2682
HindIII AAGCTT 3 cut(s) 176, 1796, 2843
HpaI GTTAAC 1 cut(s) 682
HpaII CCGG 2 cut(s) 1644, 2685
HphI GGTGA 1 cut(s) 2483
Hpy166II GTNNAC 6 cut(s) 16, 259, 643, 682, 2219, 2682
Hpy188III TCNNGA 9 cut(s) 197, 278, 545, 896, 923, 1199, 1741, 2480, 2825
Hpy8I GTNNAC 6 cut(s) 16, 259, 643, 682, 2219, 2682
HpyCH4III ACNGT 8 cut(s) 256, 1268, 1340, 1412, 2188, 2306, 2383, 2389
HpyF10VI GCNNNNNNNGC 5 cut(s) 234, 1638, 2019, 2197, 2372
HspAI GCGC 1 cut(s) 2862
Ksp22I TGATCA 1 cut(s) 295
KspAI GTTAAC 1 cut(s) 682
LguI GCTCTTC 2 cut(s) 1742, 2392
LmnI GCTCC 4 cut(s) 439, 1178, 1611, 1965
Lsp1109I GCAGC 4 cut(s) 191, 663, 1168, 2178
LweI GCATC 4 cut(s) 80, 1022, 1168, 2418
MaeIII GTNAC 6 cut(s) 194, 380, 521, 1086, 2273, 2383
MfeI CAATTG 2 cut(s) 2195, 2982
MflI RGATCY 3 cut(s) 1190, 1755, 2174
MhlI GDGCHC 3 cut(s) 136, 398, 1680
MlyI GAGTC 6 cut(s) 409, 906, 945, 1094, 1535, 1701
MmeI TCCRAC 2 cut(s) 1200, 1746
Mph1103I ATGCAT 2 cut(s) 116, 2805
MroXI GAANNNNTTC 5 cut(s) 1294, 1366, 1438, 1590, 2695
MslI CAYNNNNRTG 3 cut(s) 76, 159, 1619
MspI CCGG 2 cut(s) 1644, 2685
MspR9I CCNGG 1 cut(s) 1644
MunI CAATTG 2 cut(s) 2195, 2982
Mva1269I GAATGC 5 cut(s) 206, 1146, 1705, 1890, 2022
MvnI CGCG 1 cut(s) 2864
MwoI GCNNNNNNNGC 5 cut(s) 234, 1638, 2019, 2197, 2372
NciI CCSGG 1 cut(s) 1644
NlaIV GGNNCC 8 cut(s) 889, 1192, 1270, 1342, 1414, 1642, 1834, 2176
NmeAIII GCCGAG 1 cut(s) 1658
NmuCI GTSAC 4 cut(s) 194, 1086, 2273, 2383
NsiI ATGCAT 2 cut(s) 116, 2805
NspI RCATGY 2 cut(s) 688, 2803
PacI TTAATTAA 1 cut(s) 348
PagI TCATGA 1 cut(s) 2824
PciSI GCTCTTC 2 cut(s) 1742, 2392
PctI GAATGC 5 cut(s) 206, 1146, 1705, 1890, 2022
PdmI GAANNNNTTC 5 cut(s) 1294, 1366, 1438, 1590, 2695
PfeI GAWTC 9 cut(s) 107, 323, 505, 1018, 1591, 1809, 1825, 2620, 2726
PflMI CCANNNNNTGG 1 cut(s) 1765
PkrI GCNGC 4 cut(s) 206, 653, 1158, 2193
PleI GAGTC 6 cut(s) 409, 906, 945, 1093, 1534, 1701
PpsI GAGTC 6 cut(s) 409, 906, 945, 1093, 1534, 1701
PshAI GACNNNNGTC 1 cut(s) 2271
PshBI ATTAAT 2 cut(s) 348, 2529
PsiI TTATAA 1 cut(s) 1470
Psp124BI GAGCTC 2 cut(s) 398, 1680
PspEI GGTNACC 1 cut(s) 521
PspFI CCCAGC 1 cut(s) 2349
PspN4I GGNNCC 8 cut(s) 889, 1192, 1270, 1342, 1414, 1642, 1834, 2176
PspPI GGNCC 7 cut(s) 784, 887, 1268, 1340, 1557, 1640, 2352
PsrI GAACNNNNNNTAC 2 cut(s) 2654, 2686
PstI CTGCAG 1 cut(s) 1158
PsuI RGATCY 3 cut(s) 1190, 1755, 2174
RsaI GTAC 2 cut(s) 475, 1907
RsaNI GTAC 2 cut(s) 474, 1906
RseI CAYNNNNRTG 3 cut(s) 76, 159, 1619
SacI GAGCTC 2 cut(s) 398, 1680
SapI GCTCTTC 2 cut(s) 1742, 2392
SatI GCNGC 4 cut(s) 205, 652, 1157, 2192
Sau96I GGNCC 7 cut(s) 784, 887, 1268, 1340, 1557, 1640, 2352
SchI GAGTC 6 cut(s) 409, 906, 945, 1094, 1535, 1701
ScrFI CCNGG 1 cut(s) 1644
SduI GDGCHC 3 cut(s) 136, 398, 1680
SfaNI GCATC 4 cut(s) 80, 1022, 1168, 2418
SfcI CTRYAG 1 cut(s) 1154
SinI GGWCC 3 cut(s) 784, 1268, 1340
SmiMI CAYNNNNRTG 3 cut(s) 76, 159, 1619
SmlI CTYRAG 3 cut(s) 391, 995, 1694
SmoI CTYRAG 3 cut(s) 391, 995, 1694
SpeI ACTAGT 1 cut(s) 287
SsiI CCGC 4 cut(s) 235, 1791, 2070, 2864
SspI AATATT 2 cut(s) 1330, 1402
SstI GAGCTC 2 cut(s) 398, 1680
StyD4I CCNGG 1 cut(s) 1642
StyI CCWWGG 1 cut(s) 1553
TaaI ACNGT 8 cut(s) 256, 1268, 1340, 1412, 2188, 2306, 2383, 2389
TaqI TCGA 5 cut(s) 9, 398, 800, 1016, 2721
TfiI GAWTC 9 cut(s) 107, 323, 505, 1018, 1591, 1809, 1825, 2620, 2726
TscAI CASTG 7 cut(s) 100, 166, 244, 305, 889, 1766, 2193
TseFI GTSAC 4 cut(s) 194, 1086, 2273, 2383
TseI GCWGC 4 cut(s) 204, 651, 1156, 2191
Tsp45I GTSAC 4 cut(s) 194, 1086, 2273, 2383
TspGWI ACGGA 5 cut(s) 254, 326, 1183, 1791, 2242
TspRI CASTG 7 cut(s) 100, 166, 244, 305, 889, 1766, 2193
Van91I CCANNNNNTGG 1 cut(s) 1765
VpaK11BI GGWCC 3 cut(s) 784, 1268, 1340
VspI ATTAAT 2 cut(s) 348, 2529
XbaI TCTAGA 1 cut(s) 922
XceI RCATGY 2 cut(s) 688, 2803
XmaJI CCTAGG 1 cut(s) 1553
XmnI GAANNNNTTC 5 cut(s) 1294, 1366, 1438, 1590, 2695
Zsp2I ATGCAT 2 cut(s) 116, 2805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.