pycom05g22460

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
24787362 .. 24789179
1818 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g22460.1

Sequence Viewer

Length: 1818 bp
ATGGACCTCCGGAATCCGTATCCATATCCCGATTCTGATGCCAGGTGGGACGAGTCGGCTTATAATAAGTCTTGCTTGGGAGGTAAGATAAATGCTTCTTTGTTGAGCTTGAAACATTTAAAATACCTGGACCTCAGCTACAATGAGTTTCAAGGCATTCGCATTCCGATGTTCTTTGGGGAGCTTAAAAGTTTGCAATATCTCAATCTCTCCCTTGCATCATTTGGGGGAGAGATTCCCCCCTCTCTTGGTAACCTGTCAAGCCTGAATATTCTTGATCTCGGGATGAATTTCCGCTTGTTTTCCAGAAACTTGACTTGGCTTTCTCACCTCTCTTCCCTAAAATACCTTAATCTCAATTACGTGGACCTTAGCCGCACAGGAGCCAGGTGGGCATATGATATTAACATGCTTCCTTCATTGTTAGAGTTACACTTATCTTCGTGTCAAATTGAAAGCATTCCACTCTCACTCCAAAGGATTAACTTGACATCACTTTTGGTCCTTGATATGTCGGATAACGGTATTAAATGTTCTTCATCTCCCAGTTGGGTTTTTAATCTTAGCAGCCTCATGACTCTTGATCTATCGTGGAATAATTTCAGTTGTCCTTTTCCAAATGAATTTGCAAACTTCAAATCTCTAGAACACCTTGATTTATCTCAAACAGGCTTAAAAGGTCAAATTCCGAAAGTCATTGGAAATTTGTGCAAGCTAAAGGTCTTAAGCCTTTCTTACAACAAGTTTGATGGTGGGGGGATTGAAGAGTTTTGGCGGAGCGTCTCAAATTGTCCAAATAATTCATTGGAGTCGTTAGATTTGTCTAATTGTGAGCTGGAAAGCCAATTGCCGGCCTCCATAGGAATGTTAAAGAATTTGCAGGATCTCAACCTTGGTGGAAACCATTTGTGGGGCTCAATTCCTAATTCCATCGGACACTTGTCATCCTTGAAAACATTGGACCTCTCTTTTAATAAGATGAATGGCTCAATTCCAAAAAGTCTAGGACAACTCTATGACCTAGTTCACCTCGATCTGTCTTATAATACATGGGAAGGAACTCTAACGGAAGCCCATTTCAGAAACCTCATAAGATTACAATATTTTCGAGTGGGAATTCAAGTCACAGACCCACCCATGTCCCTCATTTTTGACGTGGCTTCTGTTTGGGTTCCTCCTTTCAAGCTCCTATCAATTGCGATCATAAACTGTCAGGTAGGTCCTGGTTTTTGGGTATGGCTTCAATCTCAAACTGAACTGATCCAAGTCACTCTTCGTGGTATTGGAATCTCTGAAGATTCAATACTAGAGGAATGGTTGTTGAAGATGTCTTCCCAACTCAAAAATTTGGATTTATCTAACAACCAATTAAGTGGAGACTTTCCATCCCATTTGAAATTTCCAAATTTAGAGCATATTGATTTGAGTCATAATCAGTTGGAGGGCCCATTCCCACTTTGGCAGTCCACTAGTGTCTATGCCCTTTATCTTGAAAGCAATATATTTTCTGGGCCAATTCCCTCGACTATTGGCCAGATGATGCCCAATTTGAAAATTTTGTCTGTAAGGAGCAATCAATTTTCTGGGGAAATGCCTCATGCGTGGAGTGTGGGAAGGAAAATTTGGTTTCTAGATGTTGGTCACAACAATCTCTCTGGTAATATTCCCACTTCATTGGGGGTATTAAGTTTACTGGAAGTATTAAAGCTCAACAACAACAATTTTGGCGGTGTAATTCCTGATTCCTTGCAAAATTGTTCTGGTTTGAGGAGTCTTGATCTTGGACACAACAAGTTATTTGGGAACATACCTCTATGA

Protein Analysis

606

Amino Acids

67.6

Weight (kDa)

5.79

Isoelectric Point (pI)

43.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 33 - 116 2.6e-08 Leucine-rich repeat region
LRR_14 PF23598 135 - 263 1.5e-10 Leucine-rich repeat region
LRR_8 PF13855 181 - 224 1.5e-06 Leucine rich repeat
LRR_8 PF13855 268 - 326 8.3e-07 Leucine rich repeat
LRR_14 PF23598 268 - 479 5.5e-13 Leucine-rich repeat region
LRR_8 PF13855 292 - 349 3.1e-07 Leucine rich repeat
LRR_4 PF12799 446 - 480 1.1e-07 Leucine Rich repeats (2 copies)
LRR_8 PF13855 562 - 599 7e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 63, 1044
AccIII TCCGGA 1 cut(s) 9
AciI CCGC 4 cut(s) 295, 376, 775, 1728
AclWI GGATC 2 cut(s) 891, 1255
AcoI YGGCCR 1 cut(s) 1531
AcuI CTGAAG 1 cut(s) 1314
AfiI CCNNNNNNNGG 3 cut(s) 248, 850, 910
AflII CTTAAG 1 cut(s) 724
AhlI ACTAGT 1 cut(s) 1469
AjiI CACGTC 1 cut(s) 1156
AjnI CCWGG 4 cut(s) 41, 126, 386, 1222
AjuI GAANNNNNNNTTGG 6 cut(s) 301, 333, 1257, 1289, 1606, 1638
AluBI AGCT 7 cut(s) 108, 138, 184, 715, 835, 1186, 1708
AluI AGCT 7 cut(s) 108, 138, 184, 715, 835, 1186, 1708
Alw26I GTCTC 2 cut(s) 787, 1371
AlwI GGATC 2 cut(s) 891, 1255
Ama87I CYCGRG 1 cut(s) 281
Aor13HI TCCGGA 1 cut(s) 9
AoxI GGCC 4 cut(s) 852, 1444, 1511, 1531
ApaI GGGCCC 1 cut(s) 1448
ApeKI GCWGC 1 cut(s) 567
ArsI GACNNNNNNTTYG 2 cut(s) 481, 513
Asp700I GAANNNNTTC 2 cut(s) 459, 599
AspS9I GGNCC 9 cut(s) 4, 130, 367, 502, 961, 1220, 1444, 1445, 1511
AsuHPI GGTGA 2 cut(s) 320, 1019
AvaI CYCGRG 1 cut(s) 281
AvaII GGWCC 6 cut(s) 4, 130, 367, 502, 961, 1220
BaeGI GKGCMC 1 cut(s) 1448
BalI TGGCCA 1 cut(s) 1533
BanII GRGCYC 2 cut(s) 917, 1448
BarI GAAGNNNNNNTAC 2 cut(s) 1287, 1319
BbsI GAAGAC 1 cut(s) 1323
BbvCI CCTCAGC 1 cut(s) 134
BbvI GCAGC 1 cut(s) 579
BccI CCATC 3 cut(s) 743, 938, 1393
BcgI CGANNNNNNTGC 2 cut(s) 20, 54
BciT130I CCWGG 4 cut(s) 43, 128, 388, 1224
BciVI GTATCC 1 cut(s) 30
BcoDI GTCTC 2 cut(s) 787, 1371
BcuI ACTAGT 1 cut(s) 1469
BfaI CTAG 6 cut(s) 644, 1004, 1022, 1307, 1470, 1631
BfrI CTTAAG 1 cut(s) 724
BfuI GTATCC 1 cut(s) 30
BglI GCCNNNNNGGC 1 cut(s) 392
BisI GCNGC 2 cut(s) 376, 568
BlsI GCNGC 2 cut(s) 377, 569
Bme1390I CCNGG 4 cut(s) 43, 128, 388, 1224
Bme18I GGWCC 6 cut(s) 4, 130, 367, 502, 961, 1220
BmeT110I CYCGRG 1 cut(s) 281
BmgBI CACGTC 1 cut(s) 1156
BmgT120I GGNCC 9 cut(s) 4, 130, 367, 502, 961, 1220, 1444, 1445, 1511
BmiI GGNNCC 3 cut(s) 385, 1173, 1446
BmrFI CCNGG 4 cut(s) 43, 128, 388, 1224
BmrI ACTGGG 1 cut(s) 540
BmsI GCATC 3 cut(s) 28, 227, 1530
BmuI ACTGGG 1 cut(s) 540
BoxI GACNNNNGTC 1 cut(s) 940
BpiI GAAGAC 1 cut(s) 1323
Bpu10I CCTNAGC 2 cut(s) 134, 371
BsaAI YACGTR 1 cut(s) 364
BsaJI CCNNGG 1 cut(s) 892
BsaWI WCCGGW 1 cut(s) 9
BsaXI ACNNNNNCTCC 2 cut(s) 456, 486
Bsc4I CCNNNNNNNGG 3 cut(s) 248, 850, 910
Bse118I RCCGGY 1 cut(s) 850
Bse1I ACTGG 2 cut(s) 546, 1698
BseAI TCCGGA 1 cut(s) 9
BseBI CCWGG 4 cut(s) 43, 128, 388, 1224
BseDI CCNNGG 1 cut(s) 892
BseGI GGATG 3 cut(s) 291, 944, 1385
BseLI CCNNNNNNNGG 3 cut(s) 248, 850, 910
BseMII CTCAG 1 cut(s) 148
BseNI ACTGG 2 cut(s) 546, 1698
BseRI GAGGAG 1 cut(s) 1783
BseSI GKGCMC 1 cut(s) 1448
BseXI GCAGC 1 cut(s) 579
BshFI GGCC 4 cut(s) 854, 1446, 1513, 1533
BsiHKCI CYCGRG 1 cut(s) 281
BsiSI CCGG 2 cut(s) 10, 851
BslFI GGGAC 2 cut(s) 62, 1126
BslI CCNNNNNNNGG 3 cut(s) 248, 850, 910
BsmAI GTCTC 2 cut(s) 787, 1371
BsmBI CGTCTC 1 cut(s) 787
BsmFI GGGAC 2 cut(s) 62, 1126
BsmI GAATGC 3 cut(s) 156, 162, 459
BsnI GGCC 4 cut(s) 854, 1446, 1513, 1533
BsoBI CYCGRG 1 cut(s) 281
Bsp120I GGGCCC 1 cut(s) 1444
Bsp1286I GDGCHC 2 cut(s) 917, 1448
Bsp13I TCCGGA 1 cut(s) 9
Bsp143I GATC 7 cut(s) 277, 583, 883, 1033, 1200, 1260, 1777
BspACI CCGC 4 cut(s) 295, 376, 775, 1728
BspANI GGCC 4 cut(s) 854, 1446, 1513, 1533
BspCNI CTCAG 1 cut(s) 147
BspEI TCCGGA 1 cut(s) 9
BspHI TCATGA 1 cut(s) 573
BspLI GGNNCC 3 cut(s) 385, 1173, 1446
BspPI GGATC 2 cut(s) 891, 1255
BspTI CTTAAG 1 cut(s) 724
BsrFI RCCGGY 1 cut(s) 850
BsrI ACTGG 2 cut(s) 546, 1698
BssAI RCCGGY 1 cut(s) 850
BssECI CCNNGG 1 cut(s) 892
BssMI GATC 7 cut(s) 277, 583, 883, 1033, 1200, 1260, 1777
BssT1I CCWWGG 1 cut(s) 892
Bst2UI CCWGG 4 cut(s) 43, 128, 388, 1224
Bst4CI ACNGT 2 cut(s) 524, 1211
Bst6I CTCTTC 3 cut(s) 340, 759, 1278
BstAFI CTTAAG 1 cut(s) 724
BstBAI YACGTR 1 cut(s) 364
BstC8I GCNNGC 2 cut(s) 713, 852
BstDEI CTNAG 3 cut(s) 134, 371, 563
BstEII GGTNACC 1 cut(s) 251
BstF5I GGATG 3 cut(s) 291, 944, 1385
BstKTI GATC 7 cut(s) 280, 586, 886, 1036, 1203, 1263, 1780
BstMAI GTCTC 2 cut(s) 787, 1371
BstMBI GATC 7 cut(s) 277, 583, 883, 1033, 1200, 1260, 1777
BstMWI GCNNNNNNNGC 1 cut(s) 392
BstNI CCWGG 4 cut(s) 43, 128, 388, 1224
BstNSI RCATGY 1 cut(s) 412
BstPAI GACNNNNGTC 1 cut(s) 940
BstPI GGTNACC 1 cut(s) 251
BstSCI CCNGG 4 cut(s) 41, 126, 386, 1222
BstSLI GKGCMC 1 cut(s) 1448
BstV1I GCAGC 1 cut(s) 579
BstV2I GAAGAC 1 cut(s) 1323
BstX2I RGATCY 1 cut(s) 883
BstXI CCANNNNNNTGG 2 cut(s) 1373, 1675
BstYI RGATCY 1 cut(s) 883
BsuI GTATCC 1 cut(s) 30
BsuRI GGCC 4 cut(s) 854, 1446, 1513, 1533
BtrI CACGTC 1 cut(s) 1156
BtsCI GGATG 3 cut(s) 291, 944, 1385
Cac8I GCNNGC 2 cut(s) 713, 852
CciI TCATGA 1 cut(s) 573
Cfr10I RCCGGY 1 cut(s) 850
Cfr13I GGNCC 9 cut(s) 4, 130, 367, 502, 961, 1220, 1444, 1445, 1511
CseI GACGC 1 cut(s) 769
CspCI CAANNNNNGTGG 2 cut(s) 877, 912
CviAII CATG 5 cut(s) 409, 574, 1050, 1138, 1598
DdeI CTNAG 3 cut(s) 134, 371, 563
DpnI GATC 7 cut(s) 279, 585, 885, 1035, 1202, 1262, 1779
DpnII GATC 7 cut(s) 277, 583, 883, 1033, 1200, 1260, 1777
DraI TTTAAA 1 cut(s) 120
EaeI YGGCCR 1 cut(s) 1531
Eam1104I CTCTTC 3 cut(s) 340, 759, 1278
EarI CTCTTC 3 cut(s) 340, 759, 1278
EciI GGCGGA 1 cut(s) 790
Eco130I CCWWGG 1 cut(s) 892
Eco24I GRGCYC 2 cut(s) 917, 1448
Eco47I GGWCC 6 cut(s) 4, 130, 367, 502, 961, 1220
Eco57I CTGAAG 1 cut(s) 1314
Eco88I CYCGRG 1 cut(s) 281
Eco91I GGTNACC 1 cut(s) 251
EcoO109I RGGNCCY 2 cut(s) 1220, 1444
EcoO65I GGTNACC 1 cut(s) 251
EcoRI GAATTC 1 cut(s) 1116
EcoRII CCWGG 4 cut(s) 41, 126, 386, 1222
EcoT14I CCWWGG 1 cut(s) 892
EcoT38I GRGCYC 2 cut(s) 917, 1448
ErhI CCWWGG 1 cut(s) 892
Esp3I CGTCTC 1 cut(s) 787
FaeI CATG 5 cut(s) 412, 577, 1053, 1141, 1601
FalI AAGNNNNNCTT 6 cut(s) 59, 91, 718, 750, 1257, 1289
FaqI GGGAC 2 cut(s) 62, 1126
FatI CATG 5 cut(s) 408, 573, 1049, 1137, 1597
FauNDI CATATG 1 cut(s) 397
Fnu4HI GCNGC 2 cut(s) 376, 568
FokI GGATG 3 cut(s) 298, 931, 1372
FriOI GRGCYC 2 cut(s) 917, 1448
Fsp4HI GCNGC 2 cut(s) 376, 568
FspBI CTAG 6 cut(s) 644, 1004, 1022, 1307, 1470, 1631
GluI GCNGC 2 cut(s) 376, 568
HaeIII GGCC 4 cut(s) 854, 1446, 1513, 1533
HapII CCGG 2 cut(s) 10, 851
HgaI GACGC 1 cut(s) 769
Hin1II CATG 5 cut(s) 412, 577, 1053, 1141, 1601
HpaII CCGG 2 cut(s) 10, 851
HphI GGTGA 2 cut(s) 320, 1019
Hpy166II GTNNAC 4 cut(s) 367, 1027, 1467, 1691
Hpy188I TCNGA 7 cut(s) 37, 168, 517, 690, 935, 1082, 1294
Hpy8I GTNNAC 4 cut(s) 367, 1027, 1467, 1691
HpyAV CCTTC 3 cut(s) 426, 1049, 1608
HpyCH4III ACNGT 2 cut(s) 524, 1211
HpyCH4IV ACGT 2 cut(s) 363, 1155
HpyCH4V TGCA 6 cut(s) 196, 218, 629, 711, 880, 1750
HpyF10VI GCNNNNNNNGC 1 cut(s) 392
HpyF3I CTNAG 3 cut(s) 134, 371, 563
HpySE526I ACGT 2 cut(s) 363, 1155
Hsp92II CATG 5 cut(s) 412, 577, 1053, 1141, 1601
Kpn2I TCCGGA 1 cut(s) 9
KroI GCCGGC 1 cut(s) 850
KroNI GCCGGC 1 cut(s) 852
Kzo9I GATC 7 cut(s) 277, 583, 883, 1033, 1200, 1260, 1777
LmnI GCTCC 5 cut(s) 181, 383, 777, 1191, 1569
Lsp1109I GCAGC 1 cut(s) 579
LweI GCATC 3 cut(s) 28, 227, 1530
MaeI CTAG 6 cut(s) 644, 1004, 1022, 1307, 1470, 1631
MaeII ACGT 2 cut(s) 363, 1155
MaeIII GTNAC 5 cut(s) 251, 429, 1123, 1267, 1640
MalI GATC 7 cut(s) 279, 585, 885, 1035, 1202, 1262, 1779
MboI GATC 7 cut(s) 277, 583, 883, 1033, 1200, 1260, 1777
MboII GAAGA 8 cut(s) 327, 432, 528, 776, 1265, 1307, 1323, 1336
MfeI CAATTG 2 cut(s) 845, 1194
MflI RGATCY 1 cut(s) 883
MhlI GDGCHC 2 cut(s) 917, 1448
MlsI TGGCCA 1 cut(s) 1533
MluNI TGGCCA 1 cut(s) 1533
MlyI GAGTC 5 cut(s) 62, 571, 818, 1435, 1780
MmeI TCCRAC 2 cut(s) 495, 1419
Mox20I TGGCCA 1 cut(s) 1533
MroI TCCGGA 1 cut(s) 9
MroNI GCCGGC 1 cut(s) 850
MroXI GAANNNNTTC 2 cut(s) 459, 599
MscI TGGCCA 1 cut(s) 1533
MslI CAYNNNNRTG 2 cut(s) 167, 863
Msp20I TGGCCA 1 cut(s) 1533
MspCI CTTAAG 1 cut(s) 724
MspI CCGG 2 cut(s) 10, 851
MspR9I CCNGG 4 cut(s) 43, 128, 388, 1224
MunI CAATTG 2 cut(s) 845, 1194
Mva1269I GAATGC 3 cut(s) 156, 162, 459
MvaI CCWGG 4 cut(s) 43, 128, 388, 1224
MwoI GCNNNNNNNGC 1 cut(s) 392
NaeI GCCGGC 1 cut(s) 852
NdeI CATATG 1 cut(s) 397
NdeII GATC 7 cut(s) 277, 583, 883, 1033, 1200, 1260, 1777
NgoMIV GCCGGC 1 cut(s) 850
NlaIII CATG 5 cut(s) 412, 577, 1053, 1141, 1601
NlaIV GGNNCC 3 cut(s) 385, 1173, 1446
NmuCI GTSAC 3 cut(s) 1123, 1267, 1640
NspI RCATGY 1 cut(s) 412
PagI TCATGA 1 cut(s) 573
PctI GAATGC 3 cut(s) 156, 162, 459
PdiI GCCGGC 1 cut(s) 852
PdmI GAANNNNTTC 2 cut(s) 459, 599
PfeI GAWTC 6 cut(s) 13, 32, 235, 1287, 1298, 1742
PkrI GCNGC 2 cut(s) 377, 569
PleI GAGTC 5 cut(s) 61, 571, 817, 1434, 1779
PpsI GAGTC 5 cut(s) 61, 571, 817, 1434, 1779
Ppu21I YACGTR 1 cut(s) 364
PpuMI RGGWCCY 1 cut(s) 1220
PshAI GACNNNNGTC 1 cut(s) 940
PsiI TTATAA 2 cut(s) 63, 1044
Psp5II RGGWCCY 1 cut(s) 1220
Psp6I CCWGG 4 cut(s) 41, 126, 386, 1222
PspEI GGTNACC 1 cut(s) 251
PspGI CCWGG 4 cut(s) 41, 126, 386, 1222
PspN4I GGNNCC 3 cut(s) 385, 1173, 1446
PspOMI GGGCCC 1 cut(s) 1444
PspPI GGNCC 9 cut(s) 4, 130, 367, 502, 961, 1220, 1444, 1445, 1511
PspPPI RGGWCCY 1 cut(s) 1220
PsrI GAACNNNNNNTAC 2 cut(s) 517, 549
PsuI RGATCY 1 cut(s) 883
RseI CAYNNNNRTG 2 cut(s) 167, 863
SatI GCNGC 2 cut(s) 376, 568
Sau3AI GATC 7 cut(s) 277, 583, 883, 1033, 1200, 1260, 1777
Sau96I GGNCC 9 cut(s) 4, 130, 367, 502, 961, 1220, 1444, 1445, 1511
SchI GAGTC 5 cut(s) 62, 571, 818, 1435, 1780
ScrFI CCNGG 4 cut(s) 43, 128, 388, 1224
SduI GDGCHC 2 cut(s) 917, 1448
SfaNI GCATC 3 cut(s) 28, 227, 1530
SinI GGWCC 6 cut(s) 4, 130, 367, 502, 961, 1220
SmiMI CAYNNNNRTG 2 cut(s) 167, 863
SmlI CTYRAG 1 cut(s) 724
SmoI CTYRAG 1 cut(s) 724
SpeI ACTAGT 1 cut(s) 1469
SsiI CCGC 4 cut(s) 295, 376, 775, 1728
SspI AATATT 3 cut(s) 271, 1103, 1663
SspMI CTAG 6 cut(s) 644, 1004, 1022, 1307, 1470, 1631
StyD4I CCNGG 4 cut(s) 41, 126, 386, 1222
StyI CCWWGG 1 cut(s) 892
TaaI ACNGT 2 cut(s) 524, 1211
TaiI ACGT 2 cut(s) 366, 1158
TaqI TCGA 3 cut(s) 1032, 1108, 1523
TauI GCSGC 1 cut(s) 378
TfiI GAWTC 6 cut(s) 13, 32, 235, 1287, 1298, 1742
TseFI GTSAC 3 cut(s) 1123, 1267, 1640
TseI GCWGC 1 cut(s) 567
Tsp45I GTSAC 3 cut(s) 1123, 1267, 1640
TspDTI ATGAA 7 cut(s) 302, 408, 528, 636, 792, 995, 1662
TspGWI ACGGA 2 cut(s) 6, 1082
Vha464I CTTAAG 1 cut(s) 724
VpaK11BI GGWCC 6 cut(s) 4, 130, 367, 502, 961, 1220
XbaI TCTAGA 2 cut(s) 643, 1630
XceI RCATGY 1 cut(s) 412
XcmI CCANNNNNNNNNTGG 1 cut(s) 1455
XmnI GAANNNNTTC 2 cut(s) 459, 599
XspI CTAG 6 cut(s) 644, 1004, 1022, 1307, 1470, 1631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.