Rroxscaffold_7G00192740

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
34063759 .. 34066728
2970 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00192740.1

Sequence Viewer

Length: 2970 bp
ATGAGTAGTTCTGCAAACTTTCCCAACCCTGTCTATCATATCAATATTGCTCTCTGTTTCCTCCTTTTGTTTTTAGCCTCTTCATGTCTAAACACTAGTAAACTACTCTGCTTGGGAGATGATCTTCCAGTTGTGAAATGCATCGACAAAGAGAGAAGCGCGCTTCTCATCTTTAAGGCAGATCTTATCGATGCTTCGGGTAGGCTATCATCTTGGGAGGGCCAAAATTGTTGTCAATGGAAAGGGATTTCATGCAACAACCGCACTGGTCATGTTGAAAAGATGGACCTTCGCAATACAAGTCCAGCTCCATCTATTGATGCTGAAGACTGGGAGTGGGAGGCTTATTATGAATCCTTTCTGGGGGGTAAGATAAATCCTTCTTTACTGGGCTTGAAATATTTGAGTTACCTAGACTTGAGCTCGAATGACTTTCAAGGGCTTCAAATTCCAAAGTTCTTTGGTCAGCTTAGAAGCCTGAAGTATCTCAATGTCTCATCTTCATCATTTGATGGGCAGATTCCATCTCATCTTGGTAACCTATCAAACTTGAACTACCTTGACCTCAGTGGTGACAATTTATTGGAAATTTCTTCCATAAATTTGAATTGGCTTTCTCATCTCTCCTCTCTAAAATACCTCATTCTGAATGAAGTGAACCTTAGCAACGCAGGAGCCAGTTGGCTATATGCTGTTAACAAGCTTCCTTCCATGCTAGAGTTACACTTGTCTAGATGCAACATTGATAGCCTTCCACTTTCACTTCACACCATGAATCTCACATCACTTTTGATCCTTGACATGTCATTCAATGATTTTAAGTTTCCATTTCCAAAGTGGGTCTTTAATCTAACTAGCCTCAGAGGACTTCACTTGGCCATGAATTCTTTCAGCGGTCCCTTTCCCAATGATTTCGTTAACCTGAAATCGTTGGAAGAACTTGATTTATCTCTTAACGGCCTTCAAGGTCGAATTCCCAAACTCTTTGGAAATCTTTGCAACCTAAAGACCTTCATTCTTGCGGACAACGCATTTGATCAGGGGATTCCAGAGTTTTTGGATGGTTTATCAGGTTGTGCAAATAACAAGTTGGAGTCACTAGATTTGTCTCGTAATAAGCTGGTAGGCGAATTGCCTGCCTCCTTAGGGATGCTCCCCCATTTGCAGTACCTTAACCTCTTCCATAATCAGTTGAATGGATCCATTCCAGAAAGTTTGGGACGACTTTCTGAGCTAGTTCATCTAGACCTTTTGGAGAACTCATTGGTAGGCTTTTTAACTGAAGCCCATTTCATCGATCTCACAAAATTAAAATACATTGCACTGGGCTATAGAAGTAACCCCAACATGCAAACTTCCATCATTTTCAATGTGGCTTATGGGTGGGTTCCTCCTTTCAAGCTTGACACCATTGTCATTAGGAACTGTCAAGTAGGTCCTGCCTTTTCATTGTGGCTTCTATCTCAAACTGCACTAGTATATGTCATTCTTAGCCATTCAGGAATCTCTGATTCCATACCAGAGGAATGGTTCATGAAAATATCTTCCCAAGTCCAAGTTTTGGATTTATCTTACAACCAAATTCGCGGAAATCTTCCAGTCCAATTGAAATTTCCAGATTTGGTGGCTCTAGCTTTGAGTCATAATCAATTCCACGGCTCACTCCCGCTTTGGTTTTGTAAGGAGGCTTACTACCTTAATCTTGCTAGCAATTCATTTTCCGGGCCAATTCCGTTAACTTTTGACCAACAATTTCCAAAATTGGAAGAACTGCATCTCCATGACAATTATTTGAATGGCACTATTCCATCCTCTGTCTGCAACATGCAGGAGTTGACAATCCTTTCTCTAAGAAGCAACAACATTTATGGAGAATTCCCTCGAGCATGGAGTATGTGGAGTGACATATTTATTGTAGATGTTGGAGACAATCATCTGTCAGGAAATATTCCCAGTTCAATGGGTATCCCCAGTTCTCTTTTGATGTTGTCGATGAAGAACAACAATTTCGATGGTGAAATCCCAATTGCCTTAGGAAATTGCTCCGATCTGAGGAGTATTGATCTTGGTGGTAATAGATTTACTGGGAGCATACCTTCATGGATAGGAACAAATGTATCCAAGGTGTTTGTTTTACGACTGCGGTCCAATTTTCTAAGTGGACATGTTCCCCACAAATTGTGCAATCTTGGCTACCTTCACCTCCTAGATCTTGGTAATAACTACCTCTCAGGTACTATACCAAAGTGTTTGAATAATATAACTTCTCTAACAGATGTCAAGTTCAATGCTTATGCCTTGTATAATGCGTATGAGCAACAAATAATGGTGACCAGAGGAAGAGAACTCCAATATAACAGGACTCTGATGTCGGTCAAAAGCATAGATCTCTCCTCAAATAGTTTGGAAGGCGAAATCCCTAAAGAAATGTGCAGTCTCTTTGCATTGGTTATCTTGAATTTGTCAATGAATCATCTAAGTGGAAATATTCCCTCAAAAATCGGAAACTTGCGGTCACTTCAATTCCTTGATCTCTCACTCAACCACCTTTCGGGACGAATTCCTCAAAGCATTTCATCTTTAACCTATTTGTCCAACTTAAATTTGTCTTACAATGAATTGATCGGAAGAATTCCTTCGGGTAACCAACTTCGAGCACTTGATGATTCAACCAATATTTATGGGGGCAATCCATCACTTTGTGGGGTTCCTCTTCCAAATAAGTGCCCAGGAGATGAGACATCTCCACAACACACTTTTCCTCGAGGAAAAATACATGAAGATGATAAGAAGCTTGGTTTCTATATCAGCGTAGTACTCGGCTTTGTCACAGGCTTCTGGGGTGTTTGTGGCACATTAACTATAAAGAAGACATGGAGGTATGCCTACTTTCAATTCTTTGATAGCATCCAAGAAAAGGTAGCAGTGGCTGTTGCATTGAAAATGGCTTGTTTCCAGAGGAAAATTTGA

Protein Analysis

989

Amino Acids

110.26

Weight (kDa)

6.19

Isoelectric Point (pI)

36.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 49 - 86 1.1e-10 Leucine rich repeat N-terminal domain
LRR_8 PF13855 135 - 194 2.9e-06 Leucine rich repeat
LRR_14 PF23598 198 - 439 1.3e-13 Leucine-rich repeat region
LRR_14 PF23598 801 - 873 5e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1412, 2368
AbsI CCTCGAGG 1 cut(s) 2763
AccB7I CCANNNNNTGG 1 cut(s) 1561
AccII CGCG 2 cut(s) 161, 1587
AciI CCGC 7 cut(s) 262, 894, 1022, 1587, 1667, 2143, 2512
AclWI GGATC 3 cut(s) 787, 1194, 1207
AcoI YGGCCR 1 cut(s) 876
AcuI CTGAAG 3 cut(s) 345, 500, 1302
AdeI CACNNNGTG 1 cut(s) 2702
AfaI GTAC 3 cut(s) 1169, 2236, 2817
AfiI CCNNNNNNNGG 6 cut(s) 363, 1146, 1561, 2052, 2551, 2917
AflIII ACRYGT 2 cut(s) 801, 2164
AhlI ACTAGT 2 cut(s) 95, 1474
AjnI CCWGG 1 cut(s) 2728
AjuI GAANNNNNNNTTGG 2 cut(s) 1596, 1628
AloI GAACNNNNNNTCC 2 cut(s) 1761, 1793
AluBI AGCT 9 cut(s) 308, 423, 469, 703, 1120, 1234, 1402, 1634, 2794
AluI AGCT 9 cut(s) 308, 423, 469, 703, 1120, 1234, 1402, 1634, 2794
Alw21I GWGCWC 2 cut(s) 425, 2659
Alw26I GTCTC 5 cut(s) 499, 1113, 1920, 2441, 2732
AlwI GGATC 3 cut(s) 787, 1194, 1207
AlwNI CAGNNNCTG 1 cut(s) 2930
Ama87I CYCGRG 2 cut(s) 1881, 2763
AoxI GGCC 4 cut(s) 220, 876, 958, 1724
ArsI GACNNNNNNTTYG 4 cut(s) 217, 249, 1016, 1048
Asp700I GAANNNNTTC 3 cut(s) 357, 887, 2635
AspLEI GCGC 2 cut(s) 161, 163
AspS9I GGNCC 6 cut(s) 220, 286, 896, 1436, 1724, 2145
AsuC2I CCSGG 1 cut(s) 1723
AsuHPI GGTGA 4 cut(s) 584, 2027, 2192, 2341
AsuNHI GCTAGC 1 cut(s) 1706
AvaI CYCGRG 2 cut(s) 1881, 2763
AvaII GGWCC 4 cut(s) 286, 896, 1436, 2145
AxyI CCTNAGG 2 cut(s) 1144, 2032
BaeGI GKGCMC 1 cut(s) 2729
BaeI ACNNNNGTAYC 2 cut(s) 2100, 2133
BalI TGGCCA 1 cut(s) 878
BamHI GGATCC 1 cut(s) 1199
BanII GRGCYC 1 cut(s) 425
BbsI GAAGAC 2 cut(s) 333, 2876
Bbv12I GWGCWC 2 cut(s) 425, 2659
BccI CCATC 9 cut(s) 277, 319, 506, 532, 1055, 1367, 1816, 2006, 2701
BceAI ACGGC 2 cut(s) 973, 1672
BcgI CGANNNNNNTGC 2 cut(s) 1118, 1152
BciT130I CCWGG 1 cut(s) 2730
BciVI GTATCC 2 cut(s) 1976, 2128
BclI TGATCA 1 cut(s) 1036
BcnI CCSGG 1 cut(s) 1723
BcoDI GTCTC 5 cut(s) 499, 1113, 1920, 2441, 2732
BcuI ACTAGT 2 cut(s) 95, 1474
BfmI CTRYAG 1 cut(s) 1330
BfuI GTATCC 2 cut(s) 1976, 2128
BglII AGATCT 3 cut(s) 181, 2209, 2386
BmcAI AGTACT 1 cut(s) 2817
Bme1390I CCNGG 2 cut(s) 1723, 2730
Bme18I GGWCC 4 cut(s) 286, 896, 1436, 2145
BmeT110I CYCGRG 2 cut(s) 1881, 2763
BmgT120I GGNCC 6 cut(s) 220, 286, 896, 1436, 1724, 2145
BmiI GGNNCC 5 cut(s) 676, 898, 1201, 1389, 2709
BmrFI CCNGG 2 cut(s) 1723, 2730
BmrI ACTGGG 6 cut(s) 340, 398, 1334, 1947, 1965, 2094
BmsI GCATC 7 cut(s) 150, 181, 310, 725, 1140, 1783, 2916
BmtI GCTAGC 1 cut(s) 1710
BmuI ACTGGG 6 cut(s) 340, 398, 1334, 1947, 1965, 2094
BoxI GACNNNNGTC 1 cut(s) 2143
BpiI GAAGAC 2 cut(s) 333, 2876
Bpu10I CCTNAGC 1 cut(s) 662
BpuEI CTTGAG 1 cut(s) 439
BpuMI CCSGG 1 cut(s) 1723
Bsa29I ATCGAT 2 cut(s) 189, 1296
BsaJI CCNNGG 3 cut(s) 1654, 2121, 2728
BsaXI ACNNNNNCTCC 2 cut(s) 1761, 1791
Bsc4I CCNNNNNNNGG 6 cut(s) 363, 1146, 1561, 2052, 2551, 2917
Bse21I CCTNAGG 2 cut(s) 1144, 2032
Bse3DI GCAATG 1 cut(s) 1317
BseBI CCWGG 1 cut(s) 2730
BseCI ATCGAT 2 cut(s) 189, 1296
BseDI CCNNGG 3 cut(s) 1654, 2121, 2728
BseGI GGATG 4 cut(s) 1066, 1155, 1808, 2907
BseLI CCNNNNNNNGG 6 cut(s) 363, 1146, 1561, 2052, 2551, 2917
BseMI GCAATG 1 cut(s) 1317
BseMII CTCAG 5 cut(s) 580, 874, 1221, 2042, 2244
BsePI GCGCGC 1 cut(s) 159
BseRI GAGGAG 3 cut(s) 616, 2068, 2383
BseSI GKGCMC 1 cut(s) 2729
BsgI GTGCAG 2 cut(s) 1455, 2452
Bsh1236I CGCG 2 cut(s) 161, 1587
BshFI GGCC 4 cut(s) 222, 878, 960, 1726
BshVI ATCGAT 2 cut(s) 189, 1296
BsiHKAI GWGCWC 2 cut(s) 425, 2659
BsiHKCI CYCGRG 2 cut(s) 1881, 2763
BsiSI CCGG 1 cut(s) 1722
BslFI GGGAC 3 cut(s) 882, 1233, 2568
BslI CCNNNNNNNGG 6 cut(s) 363, 1146, 1561, 2052, 2551, 2917
BsmAI GTCTC 5 cut(s) 499, 1113, 1920, 2441, 2732
BsmFI GGGAC 3 cut(s) 882, 1233, 2568
BsnI GGCC 4 cut(s) 222, 878, 960, 1726
BsoBI CYCGRG 2 cut(s) 1881, 2763
Bsp1286I GDGCHC 3 cut(s) 425, 2659, 2729
BspACI CCGC 7 cut(s) 262, 894, 1022, 1587, 1667, 2143, 2512
BspANI GGCC 4 cut(s) 222, 878, 960, 1726
BspCNI CTCAG 5 cut(s) 579, 873, 1222, 2043, 2243
BspDI ATCGAT 2 cut(s) 189, 1296
BspFNI CGCG 2 cut(s) 161, 1587
BspHI TCATGA 1 cut(s) 1533
BspLI GGNNCC 5 cut(s) 676, 898, 1201, 1389, 2709
BspOI GCTAGC 1 cut(s) 1710
BspPI GGATC 3 cut(s) 787, 1194, 1207
BsrDI GCAATG 1 cut(s) 1317
BssECI CCNNGG 3 cut(s) 1654, 2121, 2728
BssHII GCGCGC 1 cut(s) 159
BssT1I CCWWGG 1 cut(s) 2121
Bst2UI CCWGG 1 cut(s) 2730
Bst4CI ACNGT 1 cut(s) 1427
Bst6I CTCTTC 4 cut(s) 85, 1184, 2335, 2718
BstC8I GCNNGC 3 cut(s) 161, 1137, 1708
BstDSI CCRYGG 1 cut(s) 1654
BstEII GGTNACC 3 cut(s) 536, 2329, 2642
BstF5I GGATG 4 cut(s) 1066, 1155, 1808, 2907
BstFNI CGCG 2 cut(s) 161, 1587
BstHHI GCGC 2 cut(s) 161, 163
BstMAI GTCTC 5 cut(s) 499, 1113, 1920, 2441, 2732
BstMWI GCNNNNNNNGC 3 cut(s) 261, 1028, 2190
BstNI CCWGG 1 cut(s) 2730
BstNSI RCATGY 4 cut(s) 805, 1351, 1828, 2168
BstPAI GACNNNNGTC 1 cut(s) 2143
BstPI GGTNACC 3 cut(s) 536, 2329, 2642
BstSCI CCNGG 2 cut(s) 1721, 2728
BstSFI CTRYAG 1 cut(s) 1330
BstSLI GKGCMC 1 cut(s) 2729
BstUI CGCG 2 cut(s) 161, 1587
BstV2I GAAGAC 2 cut(s) 333, 2876
BstX2I RGATCY 4 cut(s) 181, 1199, 2209, 2386
BstXI CCANNNNNNTGG 2 cut(s) 1527, 1960
BstYI RGATCY 4 cut(s) 181, 1199, 2209, 2386
Bsu15I ATCGAT 2 cut(s) 189, 1296
Bsu36I CCTNAGG 2 cut(s) 1144, 2032
BsuI GTATCC 2 cut(s) 1976, 2128
BsuRI GGCC 4 cut(s) 222, 878, 960, 1726
BsuTUI ATCGAT 2 cut(s) 189, 1296
BtgI CCRYGG 1 cut(s) 1654
BtsCI GGATG 4 cut(s) 1066, 1155, 1808, 2907
BtsI GCAGTG 1 cut(s) 2931
BtsIMutI CAGTG 4 cut(s) 264, 574, 1322, 2931
Cac8I GCNNGC 3 cut(s) 161, 1137, 1708
CaiI CAGNNNCTG 1 cut(s) 2930
CciI TCATGA 1 cut(s) 1533
CfoI GCGC 2 cut(s) 161, 163
Cfr13I GGNCC 6 cut(s) 220, 286, 896, 1436, 1724, 2145
ClaI ATCGAT 2 cut(s) 189, 1296
Csp6I GTAC 3 cut(s) 1168, 2235, 2816
CviQI GTAC 3 cut(s) 1168, 2235, 2816
DraIII CACNNNGTG 1 cut(s) 2702
DrdI GACNNNNNNGTC 2 cut(s) 1412, 2368
DseDI GACNNNNNNGTC 2 cut(s) 1412, 2368
EaeI YGGCCR 1 cut(s) 876
Eam1104I CTCTTC 4 cut(s) 85, 1184, 2335, 2718
EarI CTCTTC 4 cut(s) 85, 1184, 2335, 2718
Ecl136II GAGCTC 1 cut(s) 423
Eco130I CCWWGG 1 cut(s) 2121
Eco24I GRGCYC 1 cut(s) 425
Eco47I GGWCC 4 cut(s) 286, 896, 1436, 2145
Eco53kI GAGCTC 1 cut(s) 423
Eco57I CTGAAG 3 cut(s) 345, 500, 1302
Eco81I CCTNAGG 2 cut(s) 1144, 2032
Eco88I CYCGRG 2 cut(s) 1881, 2763
Eco91I GGTNACC 3 cut(s) 536, 2329, 2642
EcoICRI GAGCTC 1 cut(s) 423
EcoO109I RGGNCCY 1 cut(s) 1436
EcoO65I GGTNACC 3 cut(s) 536, 2329, 2642
EcoRI GAATTC 5 cut(s) 883, 972, 1874, 2559, 2631
EcoRII CCWGG 1 cut(s) 2728
EcoT14I CCWWGG 1 cut(s) 2121
EcoT22I ATGCAT 1 cut(s) 143
EcoT38I GRGCYC 1 cut(s) 425
ErhI CCWWGG 1 cut(s) 2121
FalI AAGNNNNNCTT 6 cut(s) 645, 677, 827, 859, 2620, 2652
FaqI GGGAC 3 cut(s) 882, 1233, 2568
FauI CCCGC 1 cut(s) 1674
FbaI TGATCA 1 cut(s) 1036
FokI GGATG 4 cut(s) 1073, 1162, 1795, 2894
FriOI GRGCYC 1 cut(s) 425
GlaI GCGC 2 cut(s) 160, 162
HaeIII GGCC 4 cut(s) 222, 878, 960, 1726
HapII CCGG 1 cut(s) 1722
HhaI GCGC 2 cut(s) 161, 163
Hin6I GCGC 2 cut(s) 159, 161
HinP1I GCGC 2 cut(s) 159, 161
HincII GTYRAC 4 cut(s) 697, 919, 1737, 1836
HindII GTYRAC 4 cut(s) 697, 919, 1737, 1836
HindIII AAGCTT 3 cut(s) 701, 1400, 2792
HpaI GTTAAC 3 cut(s) 697, 919, 1737
HpaII CCGG 1 cut(s) 1722
HphI GGTGA 4 cut(s) 584, 2027, 2192, 2341
Hpy166II GTNNAC 7 cut(s) 101, 658, 697, 919, 1737, 1836, 2162
Hpy188I TCNGA 9 cut(s) 648, 863, 1231, 1510, 2047, 2052, 2367, 2504, 2627
Hpy8I GTNNAC 7 cut(s) 101, 658, 697, 919, 1737, 1836, 2162
HpyCH4III ACNGT 1 cut(s) 1427
HpyF10VI GCNNNNNNNGC 3 cut(s) 261, 1028, 2190
HspAI GCGC 2 cut(s) 159, 161
Ksp22I TGATCA 1 cut(s) 1036
KspAI GTTAAC 3 cut(s) 697, 919, 1737
LmnI GCTCC 5 cut(s) 313, 674, 1158, 2048, 2088
LweI GCATC 7 cut(s) 150, 181, 310, 725, 1140, 1783, 2916
MfeI CAATTG 2 cut(s) 1604, 2025
MflI RGATCY 4 cut(s) 181, 1199, 2209, 2386
MhlI GDGCHC 3 cut(s) 425, 2659, 2729
MlsI TGGCCA 1 cut(s) 878
MluNI TGGCCA 1 cut(s) 878
MlyI GAGTC 3 cut(s) 1103, 1648, 2356
MmeI TCCRAC 4 cut(s) 912, 1071, 1903, 2619
Mox20I TGGCCA 1 cut(s) 878
Mph1103I ATGCAT 1 cut(s) 143
MroXI GAANNNNTTC 3 cut(s) 357, 887, 2635
MscI TGGCCA 1 cut(s) 878
MslI CAYNNNNRTG 3 cut(s) 1779, 2478, 2781
Msp20I TGGCCA 1 cut(s) 878
MspA1I CMGCKG 1 cut(s) 894
MspI CCGG 1 cut(s) 1722
MspR9I CCNGG 2 cut(s) 1723, 2730
MunI CAATTG 2 cut(s) 1604, 2025
MvaI CCWGG 1 cut(s) 2730
MvnI CGCG 2 cut(s) 161, 1587
MwoI GCNNNNNNNGC 3 cut(s) 261, 1028, 2190
NciI CCSGG 1 cut(s) 1723
NheI GCTAGC 1 cut(s) 1706
NlaIV GGNNCC 5 cut(s) 676, 898, 1201, 1389, 2709
NmeAIII GCCGAG 1 cut(s) 2799
NmuCI GTSAC 6 cut(s) 572, 1095, 1901, 2329, 2514, 2827
NsiI ATGCAT 1 cut(s) 143
NspI RCATGY 4 cut(s) 805, 1351, 1828, 2168
PaeR7I CTCGAG 2 cut(s) 1881, 2763
PagI TCATGA 1 cut(s) 1533
PauI GCGCGC 1 cut(s) 159
PciI ACATGT 2 cut(s) 801, 2164
PdmI GAANNNNTTC 3 cut(s) 357, 887, 2635
PfeI GAWTC 8 cut(s) 353, 520, 775, 1045, 1503, 1511, 2470, 2666
PflMI CCANNNNNTGG 1 cut(s) 1561
PleI GAGTC 3 cut(s) 1102, 1647, 2356
PpsI GAGTC 3 cut(s) 1102, 1647, 2356
PpuMI RGGWCCY 1 cut(s) 1436
PscI ACATGT 2 cut(s) 801, 2164
PshAI GACNNNNGTC 1 cut(s) 2143
Psp124BI GAGCTC 1 cut(s) 425
Psp5II RGGWCCY 1 cut(s) 1436
Psp6I CCWGG 1 cut(s) 2728
PspEI GGTNACC 3 cut(s) 536, 2329, 2642
PspGI CCWGG 1 cut(s) 2728
PspN4I GGNNCC 5 cut(s) 676, 898, 1201, 1389, 2709
PspPI GGNCC 6 cut(s) 220, 286, 896, 1436, 1724, 2145
PspPPI RGGWCCY 1 cut(s) 1436
PspXI VCTCGAGB 2 cut(s) 1881, 2763
PsrI GAACNNNNNNTAC 2 cut(s) 1957, 1989
PstNI CAGNNNCTG 1 cut(s) 2930
PsuI RGATCY 4 cut(s) 181, 1199, 2209, 2386
PteI GCGCGC 1 cut(s) 159
RsaI GTAC 3 cut(s) 1169, 2236, 2817
RsaNI GTAC 3 cut(s) 1168, 2235, 2816
RseI CAYNNNNRTG 3 cut(s) 1779, 2478, 2781
SacI GAGCTC 1 cut(s) 425
Sau96I GGNCC 6 cut(s) 220, 286, 896, 1436, 1724, 2145
ScaI AGTACT 1 cut(s) 2817
SchI GAGTC 3 cut(s) 1103, 1648, 2356
ScrFI CCNGG 2 cut(s) 1723, 2730
SduI GDGCHC 3 cut(s) 425, 2659, 2729
SfaNI GCATC 7 cut(s) 150, 181, 310, 725, 1140, 1783, 2916
SfcI CTRYAG 1 cut(s) 1330
Sfr274I CTCGAG 2 cut(s) 1881, 2763
SinI GGWCC 4 cut(s) 286, 896, 1436, 2145
SlaI CTCGAG 2 cut(s) 1881, 2763
SmiMI CAYNNNNRTG 3 cut(s) 1779, 2478, 2781
SmlI CTYRAG 3 cut(s) 418, 1881, 2763
SmoI CTYRAG 3 cut(s) 418, 1881, 2763
SpeI ACTAGT 2 cut(s) 95, 1474
SsiI CCGC 7 cut(s) 262, 894, 1022, 1587, 1667, 2143, 2512
SspI AATATT 5 cut(s) 46, 401, 1948, 2488, 2677
SstI GAGCTC 1 cut(s) 425
StyD4I CCNGG 2 cut(s) 1721, 2728
StyI CCWWGG 1 cut(s) 2121
TaaI ACNGT 1 cut(s) 1427
TaqII GACCGA 1 cut(s) 2362
TatI WGTACW 1 cut(s) 2815
TfiI GAWTC 8 cut(s) 353, 520, 775, 1045, 1503, 1511, 2470, 2666
TscAI CASTG 4 cut(s) 271, 574, 1329, 2931
TseFI GTSAC 6 cut(s) 572, 1095, 1901, 2329, 2514, 2827
Tsp45I GTSAC 6 cut(s) 572, 1095, 1901, 2329, 2514, 2827
TspGWI ACGGA 1 cut(s) 1722
TspRI CASTG 4 cut(s) 271, 574, 1329, 2931
Van91I CCANNNNNTGG 1 cut(s) 1561
VpaK11BI GGWCC 4 cut(s) 286, 896, 1436, 2145
XbaI TCTAGA 2 cut(s) 731, 1243
XceI RCATGY 4 cut(s) 805, 1351, 1828, 2168
XcmI CCANNNNNNNNNTGG 1 cut(s) 834
XhoI CTCGAG 2 cut(s) 1881, 2763
XmnI GAANNNNTTC 3 cut(s) 357, 887, 2635
ZrmI AGTACT 1 cut(s) 2817
Zsp2I ATGCAT 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.