RchiOBHm_Chr1g0315551

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
2635634 .. 2638504
2871 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54606

Sequence Viewer

Length: 2709 bp
ATGGATATCTATGTTTACTTTAACCCGATCTCTCGCCTCATTCTTCACTTCTTGCTCTTGTTATTTTTGGCATCTTCGTGCCTAAACAATAGCAGTGTCGTGGTGGAATCATGCATGGAGGAAGAGAGGCGAGCACTTCTCAGCTTTAAACAAGATCTCAGTGATCCTTCTGGTAAGCTTTCTTCTTGGGCTGGTCACGAATGCTGCCAATGGACAGGGATTTCATGCAACAACCGCACTGGTCATGTTGCAACGGTTGACCTCCGTAATACATATCCATACACCACAAATGATGAACAGTGGAACACCACGGAGTATCTTCAATCTTGTTTGGGGGGTAAGTTAATTAATCCTTCTTTGCTTGGCTTGATACATTTGAGTTACTTAGACTTAAGCTCGAATGATTTTCAAAGGACTCACATTCCCAAGTTTATTGGGGAGCTTACAAGTCTGAGATATCTCAATTTTTCAAGTATCTGGTATTTGAGTTCAGTTGCGGGAGAGATTCCTTCTTCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAGATCTAGTTATTATTCTCTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTGGAGGTGTGAACCTTAGCAGCACAGGAGTTAGTTGGCTACATGAGGTTAACATGCTTCCTTCACTCTTAGAGTTGCATTTCTCTAGTTGCGAAATTGGTGGAAACCAGCTTCCACTCTCCATGCCTACAATTAACTTCACATCACTTTTGGTCCTTGACATGTCATTGAATAGTATTAATTTTTCATATCCTAAATGGATGTTTAATCTTACTAGCCTTACAAAAGTTGATCTGAGTGAGAATTCTTTCAGTGGCCCCTTTCTTGATGAATTTGTAAGACTCAAATCTCTAGAACACCTTGACTTACGGAGTGTAGGACTCAAAGGTCAATTTCCCAAATTTAGTGGAAATTTGTGCAGGCTCAAGTCATTAAGTCTTGCAGGGAATCAAATTGATGGGGGGATTGAAGAGTTTTTGAGTGGTTTCTCAAATTGTTCATTTAATAGAATGGAGTCACTAGATTTGTATGGCTGTGGGCTGGTAGGCAAATTGCCTAGTTCGTTGGGAATGCTGAGAAGCCTACAGCATCTCTATCTCAGCTCCAACTCTTTTTGGGGATCCGTTCCAGAATTTATTATCAGAAATTTATCATCACCCCTGAAGACACTTGATCTCAGGGATAATATTTTCAACGGTTCCATTCCTCAAAATTTGGGAAAACTTTCTGAGCTAGTTACCCTTGATCTATCTTATAATTCGTGGGAAGGCAATTTAACCGAAGCCCATTTCATAAATCTCACAAAATTAGAGTATTTTGCAAATACTGGACTCTCGGGTGCAATACCAGAGGAATGGGTCTTTAAGATATCTTCCCAGATCCGATGGTTGGATTTATCTTCCAATCAAATAAGCGGAAAGCTTCCGTTCCGATTCAACTCTTTTCCGAATCTGGAGTCCATAGTTCTGAGCCATAATCAATTTGATGGCACTATTCCATCATCTATTTGTAGCATTCAATCTCTATATGAACTTGCTCTGAATAACAATCAGTTATCCGGAGAATTCCCTAAAGAATGGAGTTTGTGGAGCAGCATACTCACTGTGGATGTCTCAAACAACAATATGTCTGGTAATATTCCAAGCTCAATGGGCATTCCAAGTTCTCTTTATATGCTAAAGACAGACAACAATCATTTTAGCGGAGAAATTCCTTCTGCCTTGCAAAATTGCTCTGGTTTGCAGAGACTTTATCTTGGAGGCAACAAATTTACTGGAAGCATACCTTCTTGGATAGGATCAAAAGTGGACACATTCGCAGTGCTGCAATTGCAATCAAACTCTTTAAGTGGACAAATTCCTCGTCATTTGTGCACTCTTCCTTCCCTTCAGATCCTAGACCTTAGTCACAATAGATTTTCAGGGACTATTCCCAACTGTTTGAATAAATTGACTTCTTTAATCTCTAGTAGTTATGGGGGCTGGGACTACTCTGATGATTTTGAGGTAATAACTGTGACCGTAAAAGGAAGAGCAAGTGAATACTTAGAGAACAATGCGAGGCTTCTAACCATTATTGATTTTTCGCATAATGATTTAGAAGGTGAAATTCCTGAAGAAATCAGCAGTCTCGTTCAATTAGCTACATTAAACTTGTCCATTAATCAATTAAGTGGAAATATCCCCTCAAAAATTGGAAACTTGCACTTGCTTGAAACACTTGACCTCTCCCAGAACCAGCTTTCAGGACAGATTCCACAAAGTCTCGCTTCTCTGACCTTCTTATCTCACTTGAACTTGTCTTGCAACAAGTTGACCGGAAGAATTCCTTCGGGCAACCAACTTCAGACGCTCGATGATTCATCTATTTATAAGGGCAATCCTTCACTCTGTGGATTTCCTCTTTCAAACTGCACAGAAGATGGAGGCAACATGCATGAGACTCATGAAGCTGATGATGAAAAGCTTGGTTTATATACCAGCGCGGTGCTTGGCTTTATCATAGGCTTTTGGAGTGTTTATGGCACATTGATATTGAAGAAGTCATGGAGGTATGCTTATTTTCAATTTTTTGACCACATCAAAGAGAAAGTAGCACTAGCAATTGCATTGAAAGTAGCTCGTTTGAAAGCAAGGCAGTGA

Protein Analysis

902

Amino Acids

100.23

Weight (kDa)

5.63

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 77 1.9e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 182 - 339 8.7e-07 Leucine-rich repeat region
LRR_14 PF23598 326 - 540 3.4e-10 Leucine-rich repeat region
LRR_8 PF13855 482 - 541 8.4e-06 Leucine rich repeat
LRR_8 PF13855 602 - 662 1.8e-06 Leucine rich repeat
LRR_14 PF23598 710 - 812 3e-09 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1323, 2439
AasI GACNNNNNNGTC 1 cut(s) 954
AccII CGCG 1 cut(s) 2552
AccIII TCCGGA 1 cut(s) 1625
AciI CCGC 5 cut(s) 235, 497, 1482, 1770, 2552
AclWI GGATC 6 cut(s) 158, 1182, 1195, 1441, 1873, 1954
AcuI CTGAAG 4 cut(s) 1250, 1940, 2202, 2396
AdeI CACNNNGTG 1 cut(s) 2459
AfiI CCNNNNNNNGG 1 cut(s) 1456
AflII CTTAAG 1 cut(s) 391
AflIII ACRYGT 1 cut(s) 789
Alw21I GWGCWC 2 cut(s) 136, 1943
Alw26I GTCTC 5 cut(s) 1684, 1807, 2201, 2336, 2501
Alw44I GTGCAC 1 cut(s) 1939
AlwI GGATC 6 cut(s) 158, 1182, 1195, 1441, 1873, 1954
Ama87I CYCGRG 1 cut(s) 1402
Aor13HI TCCGGA 1 cut(s) 1625
AoxI GGCC 1 cut(s) 883
ApaLI GTGCAC 1 cut(s) 1939
ApeKI GCWGC 4 cut(s) 204, 648, 1659, 1891
ArsI GACNNNNNNTTYG 4 cut(s) 1508, 1540, 1915, 1947
AseI ATTAAT 3 cut(s) 348, 807, 2229
Asp700I GAANNNNTTC 3 cut(s) 875, 1291, 2395
AspLEI GCGC 1 cut(s) 2552
AspS9I GGNCC 2 cut(s) 781, 884
AsuHPI GGTGA 2 cut(s) 1215, 2183
AvaI CYCGRG 1 cut(s) 1402
AvaII GGWCC 1 cut(s) 781
BaeGI GKGCMC 1 cut(s) 1943
BamHI GGATCC 1 cut(s) 1187
BarI GAAGNNNNNNTAC 2 cut(s) 166, 198
BbsI GAAGAC 1 cut(s) 1238
Bbv12I GWGCWC 2 cut(s) 136, 1943
BbvI GCAGC 4 cut(s) 191, 660, 1671, 1878
BccI CCATC 5 cut(s) 1019, 1446, 1547, 1573, 2483
BcoDI GTCTC 5 cut(s) 1684, 1807, 2201, 2336, 2501
BfmI CTRYAG 1 cut(s) 1151
BfrI CTTAAG 1 cut(s) 391
BglII AGATCT 2 cut(s) 154, 554
BisI GCNGC 4 cut(s) 205, 649, 1660, 1892
BlsI GCNGC 4 cut(s) 206, 650, 1661, 1893
Bme18I GGWCC 1 cut(s) 781
BmeT110I CYCGRG 1 cut(s) 1402
BmgT120I GGNCC 2 cut(s) 781, 884
BmiI GGNNCC 3 cut(s) 886, 1189, 1267
BmsI GCATC 2 cut(s) 80, 1165
BoxI GACNNNNGTC 1 cut(s) 1971
BpiI GAAGAC 1 cut(s) 1238
BplI GAGNNNNNCTC 2 cut(s) 123, 155
BpmI CTGGAG 1 cut(s) 1541
Bpu10I CCTNAGC 1 cut(s) 644
BpuEI CTTGAG 1 cut(s) 977
BsaJI CCNNGG 1 cut(s) 309
BsaWI WCCGGW 2 cut(s) 1625, 2384
Bsc4I CCNNNNNNNGG 1 cut(s) 1456
Bse1I ACTGG 3 cut(s) 244, 1399, 1846
BseAI TCCGGA 1 cut(s) 1625
BseDI CCNNGG 1 cut(s) 309
BseGI GGATG 2 cut(s) 834, 1681
BseLI CCNNNNNNNGG 1 cut(s) 1456
BseNI ACTGG 3 cut(s) 244, 1399, 1846
BseSI GKGCMC 1 cut(s) 1943
BseXI GCAGC 4 cut(s) 191, 660, 1671, 1878
BseYI CCCAGC 1 cut(s) 2049
BsgI GTGCAG 2 cut(s) 1006, 2464
Bsh1236I CGCG 1 cut(s) 2552
BshFI GGCC 1 cut(s) 885
BsiHKAI GWGCWC 2 cut(s) 136, 1943
BsiHKCI CYCGRG 1 cut(s) 1402
BsiSI CCGG 2 cut(s) 1626, 2385
BslFI GGGAC 2 cut(s) 2005, 2066
BslI CCNNNNNNNGG 1 cut(s) 1456
BsmAI GTCTC 5 cut(s) 1684, 1807, 2201, 2336, 2501
BsmFI GGGAC 2 cut(s) 2005, 2066
BsmI GAATGC 4 cut(s) 206, 1143, 1581, 1722
BsnI GGCC 1 cut(s) 885
BsoBI CYCGRG 1 cut(s) 1402
Bsp1286I GDGCHC 2 cut(s) 136, 1943
Bsp13I TCCGGA 1 cut(s) 1625
BspACI CCGC 5 cut(s) 235, 497, 1482, 1770, 2552
BspANI GGCC 1 cut(s) 885
BspEI TCCGGA 1 cut(s) 1625
BspFNI CGCG 1 cut(s) 2552
BspHI TCATGA 1 cut(s) 2512
BspLI GGNNCC 3 cut(s) 886, 1189, 1267
BspPI GGATC 6 cut(s) 158, 1182, 1195, 1441, 1873, 1954
BspQI GCTCTTC 1 cut(s) 2092
BspTI CTTAAG 1 cut(s) 391
BsrI ACTGG 3 cut(s) 244, 1399, 1846
BssECI CCNNGG 1 cut(s) 309
Bst4CI ACNGT 7 cut(s) 256, 300, 1265, 1672, 2006, 2083, 2089
Bst6I CTCTTC 5 cut(s) 117, 613, 1032, 1950, 2092
BstAFI CTTAAG 1 cut(s) 391
BstC8I GCNNGC 2 cut(s) 132, 989
BstDSI CCRYGG 1 cut(s) 309
BstEII GGTNACC 1 cut(s) 521
BstF5I GGATG 2 cut(s) 834, 1681
BstFNI CGCG 1 cut(s) 2552
BstHHI GCGC 1 cut(s) 2552
BstMAI GTCTC 5 cut(s) 1684, 1807, 2201, 2336, 2501
BstMWI GCNNNNNNNGC 3 cut(s) 234, 1719, 1897
BstNSI RCATGY 3 cut(s) 685, 793, 2503
BstPAI GACNNNNGTC 1 cut(s) 1971
BstPI GGTNACC 1 cut(s) 521
BstSFI CTRYAG 1 cut(s) 1151
BstSLI GKGCMC 1 cut(s) 1943
BstUI CGCG 1 cut(s) 2552
BstV1I GCAGC 4 cut(s) 191, 660, 1671, 1878
BstV2I GAAGAC 1 cut(s) 1238
BstX2I RGATCY 5 cut(s) 154, 554, 1187, 1446, 1959
BstXI CCANNNNNNTGG 1 cut(s) 1422
BstYI RGATCY 5 cut(s) 154, 554, 1187, 1446, 1959
BsuRI GGCC 1 cut(s) 885
BtgI CCRYGG 1 cut(s) 309
BtsCI GGATG 2 cut(s) 834, 1681
BtsI GCAGTG 2 cut(s) 100, 1893
BtsIMutI CAGTG 7 cut(s) 100, 166, 237, 305, 886, 1668, 1893
Cac8I GCNNGC 2 cut(s) 132, 989
CciI TCATGA 1 cut(s) 2512
CfoI GCGC 1 cut(s) 2552
Cfr13I GGNCC 2 cut(s) 781, 884
CseI GACGC 1 cut(s) 2425
CspCI CAANNNNNGTGG 2 cut(s) 955, 990
DraI TTTAAA 1 cut(s) 148
DraIII CACNNNGTG 1 cut(s) 2459
DrdI GACNNNNNNGTC 1 cut(s) 954
DseDI GACNNNNNNGTC 1 cut(s) 954
Eam1104I CTCTTC 5 cut(s) 117, 613, 1032, 1950, 2092
EarI CTCTTC 5 cut(s) 117, 613, 1032, 1950, 2092
Eco32I GATATC 3 cut(s) 7, 458, 1437
Eco47I GGWCC 1 cut(s) 781
Eco57I CTGAAG 4 cut(s) 1250, 1940, 2202, 2396
Eco88I CYCGRG 1 cut(s) 1402
Eco91I GGTNACC 1 cut(s) 521
EcoO65I GGTNACC 1 cut(s) 521
EcoRI GAATTC 3 cut(s) 871, 1631, 2391
EcoRV GATATC 3 cut(s) 7, 458, 1437
EcoT22I ATGCAT 2 cut(s) 116, 2505
FalI AAGNNNNNCTT 6 cut(s) 1837, 1869, 2320, 2352, 2380, 2412
FaqI GGGAC 2 cut(s) 2005, 2066
FauI CCCGC 1 cut(s) 490
Fnu4HI GCNGC 4 cut(s) 205, 649, 1660, 1892
FokI GGATG 2 cut(s) 841, 1688
Fsp4HI GCNGC 4 cut(s) 205, 649, 1660, 1892
GlaI GCGC 1 cut(s) 2551
GluI GCNGC 4 cut(s) 205, 649, 1660, 1892
GsaI CCCAGC 1 cut(s) 2053
GsuI CTGGAG 1 cut(s) 1541
HaeIII GGCC 1 cut(s) 885
HapII CCGG 2 cut(s) 1626, 2385
HgaI GACGC 1 cut(s) 2425
HhaI GCGC 1 cut(s) 2552
Hin6I GCGC 1 cut(s) 2550
HinP1I GCGC 1 cut(s) 2550
HincII GTYRAC 3 cut(s) 259, 679, 2382
HindII GTYRAC 3 cut(s) 259, 679, 2382
HindIII AAGCTT 3 cut(s) 176, 1487, 2531
HpaI GTTAAC 1 cut(s) 679
HpaII CCGG 2 cut(s) 1626, 2385
HphI GGTGA 2 cut(s) 1215, 2183
Hpy166II GTNNAC 8 cut(s) 16, 259, 640, 679, 1876, 1919, 1941, 2382
Hpy8I GTNNAC 8 cut(s) 16, 259, 640, 679, 1876, 1919, 1941, 2382
HpyCH4III ACNGT 7 cut(s) 256, 300, 1265, 1672, 2006, 2083, 2089
HpyF10VI GCNNNNNNNGC 3 cut(s) 234, 1719, 1897
HspAI GCGC 1 cut(s) 2550
Kpn2I TCCGGA 1 cut(s) 1625
KspAI GTTAAC 1 cut(s) 679
LguI GCTCTTC 1 cut(s) 2092
LmnI GCTCC 3 cut(s) 439, 1175, 1656
Lsp1109I GCAGC 4 cut(s) 191, 660, 1671, 1878
LweI GCATC 2 cut(s) 80, 1165
MaeIII GTNAC 7 cut(s) 194, 380, 521, 1083, 1303, 1973, 2083
MfeI CAATTG 2 cut(s) 1895, 2670
MflI RGATCY 5 cut(s) 154, 554, 1187, 1446, 1959
MhlI GDGCHC 2 cut(s) 136, 1943
MlyI GAGTC 7 cut(s) 409, 903, 942, 1091, 1392, 1532, 2503
MmeI TCCRAC 2 cut(s) 1197, 1437
Mph1103I ATGCAT 2 cut(s) 116, 2505
MroI TCCGGA 1 cut(s) 1625
MroXI GAANNNNTTC 3 cut(s) 875, 1291, 2395
MslI CAYNNNNRTG 1 cut(s) 76
MspCI CTTAAG 1 cut(s) 391
MspI CCGG 2 cut(s) 1626, 2385
MunI CAATTG 2 cut(s) 1895, 2670
Mva1269I GAATGC 4 cut(s) 206, 1143, 1581, 1722
MvnI CGCG 1 cut(s) 2552
MwoI GCNNNNNNNGC 3 cut(s) 234, 1719, 1897
NlaIV GGNNCC 3 cut(s) 886, 1189, 1267
NmuCI GTSAC 4 cut(s) 194, 1083, 1973, 2083
NsiI ATGCAT 2 cut(s) 116, 2505
NspI RCATGY 3 cut(s) 685, 793, 2503
PacI TTAATTAA 1 cut(s) 348
PagI TCATGA 1 cut(s) 2512
PciI ACATGT 1 cut(s) 789
PciSI GCTCTTC 1 cut(s) 2092
PctI GAATGC 4 cut(s) 206, 1143, 1581, 1722
PdmI GAANNNNTTC 3 cut(s) 875, 1291, 2395
PfeI GAWTC 7 cut(s) 107, 505, 1015, 1500, 1516, 2320, 2426
PkrI GCNGC 4 cut(s) 206, 650, 1661, 1893
PleI GAGTC 7 cut(s) 409, 903, 942, 1090, 1392, 1531, 2503
PpsI GAGTC 7 cut(s) 409, 903, 942, 1090, 1392, 1531, 2503
PscI ACATGT 1 cut(s) 789
PshAI GACNNNNGTC 1 cut(s) 1971
PshBI ATTAAT 3 cut(s) 348, 807, 2229
PsiI TTATAA 2 cut(s) 1323, 2439
PspEI GGTNACC 1 cut(s) 521
PspFI CCCAGC 1 cut(s) 2049
PspN4I GGNNCC 3 cut(s) 886, 1189, 1267
PspPI GGNCC 2 cut(s) 781, 884
PsuI RGATCY 5 cut(s) 154, 554, 1187, 1446, 1959
RseI CAYNNNNRTG 1 cut(s) 76
SapI GCTCTTC 1 cut(s) 2092
SatI GCNGC 4 cut(s) 205, 649, 1660, 1892
Sau96I GGNCC 2 cut(s) 781, 884
SchI GAGTC 7 cut(s) 409, 903, 942, 1091, 1392, 1532, 2503
SduI GDGCHC 2 cut(s) 136, 1943
SfaNI GCATC 2 cut(s) 80, 1165
SfcI CTRYAG 1 cut(s) 1151
SinI GGWCC 1 cut(s) 781
SmiMI CAYNNNNRTG 1 cut(s) 76
SmlI CTYRAG 2 cut(s) 391, 992
SmoI CTYRAG 2 cut(s) 391, 992
SsiI CCGC 5 cut(s) 235, 497, 1482, 1770, 2552
SspI AATATT 2 cut(s) 1255, 1705
TaaI ACNGT 7 cut(s) 256, 300, 1265, 1672, 2006, 2083, 2089
TaqI TCGA 2 cut(s) 398, 2421
TfiI GAWTC 7 cut(s) 107, 505, 1015, 1500, 1516, 2320, 2426
TscAI CASTG 7 cut(s) 100, 166, 244, 305, 886, 1675, 1893
TseFI GTSAC 4 cut(s) 194, 1083, 1973, 2083
TseI GCWGC 4 cut(s) 204, 648, 1659, 1891
Tsp45I GTSAC 4 cut(s) 194, 1083, 1973, 2083
TspGWI ACGGA 5 cut(s) 254, 326, 952, 1180, 1482
TspRI CASTG 7 cut(s) 100, 166, 244, 305, 886, 1675, 1893
Vha464I CTTAAG 1 cut(s) 391
VneI GTGCAC 1 cut(s) 1939
VpaK11BI GGWCC 1 cut(s) 781
VspI ATTAAT 3 cut(s) 348, 807, 2229
XbaI TCTAGA 1 cut(s) 919
XceI RCATGY 3 cut(s) 685, 793, 2503
XmnI GAANNNNTTC 3 cut(s) 875, 1291, 2395
Zsp2I ATGCAT 2 cut(s) 116, 2505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.