RchiOBHm_Chr1g0315211

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
2371562 .. 2374386
2825 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54574

Sequence Viewer

Length: 2694 bp
ATGGATATCTATGTTTACTTTAACCCGATCTCTCGCCTCATTCTTCACTTCTTGCTCTTGTTATTTTTGGCATCTTCGTGCCTAAACAATAGCAGTGTCGTGGTGGAATCATGCATGGAGGAAGAGAGGCGAGCACTTCTCAGCTTTAAACAAGACCTCAGTGATCCTTCTGGTAAGCTTTCTTCTTGGGCTGGTCACGAATGCTGCCAATGGACAGGGATTTCATGCAACAACCGCACTGGTCATGTTGCAACGGTTGACCTCCGTAATACATATCCATACACCACTGATGATGATCAGTGGAACATGGCGGAGTATGAAGAATCTTGTTTGGGGGGTAAGTTAATTAATCCTTCTTTGCTTGGCTTGAAACATTTGAGTTACTTAGACTTGAGCTCGAATGATTTTCAAGGGATTCACATTCCCAAGTTTATTGGGGAGCTTACAAGTCTGAGATATCTCAATATTTCAAGAATCCTGTTCCAGTTGAATTCAGTTGTGGGAGAGATTCCTTCTTCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCGGTTCTAGTTTTTCTTTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTGGAGGTGTGAACCTTAGCAGCACAGGAGTTAGTTGGCTACATGAGGTTAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTAGTTGCGAAATTGGTGGAAACCAGCTTCCACTCTCCATGCCTACAATTAACTTCACATCACTTTTGGTCCTTGATATGTCAGGGAATAGTATTAATTTTTCATATCCTAATTGGATGTTTAATCTTACTAGCCTTACAAAAGTTGATCTGAGTGGGAATTCTTTCAGTGGCCCCTTTCTTGATGAATTTGTAAGACTCAAATCTCTAGAACACCTTGACTTACAGAATGTAGGACTCAAAGGTCAACTTGCCAAATTTAGTGGAAATTTGTGCAGGCTCAAGTCATTAAGTCTTGCATCGAATCAAATTGATGGGGGGATTGAAGAGTTTTTGAGTGGTTTCTCAAATTGTTCATTTAATAGAATGGAGTCACTAGATTTGGATGGCTGTGGGCTGGTAGGCAAATTGCCTAGTTCGTTGGGAATGCTGAGAAGCCTGCAGCATCTCTATCTCAGCTACAACTCTTTTTGGGGATCCATTCCAGAATTTATTATCAGCAATTTATCATCATCCCTGAATACACTTGATCTCAGGAATAATATTTTCAACTGTTCGATTCCTCAAAGTTTGGGAAAACTTTCTCAGCTAGTGAGCCTTTATCTATCTTATAATTCATGGGAAGGCAATTTAACCGAAGCCCATTTCATAAATCTCACAAAATTAGAGTCTTTTGCAGTTAGCACAGCCCAACCTGTGCCCATCATTTTCAATTTGATTGATTATGAATGGATTCCTCCTTTCAAGCTCCACCACATTGAAATGCACAACTGCCGAGTAGGCCCCGGCTTCCCTGTATGGCTTCAATCTCAAACTGAGCTCGTGTGGGTCTCACTTAAGAATGCTGGAATCTCGGGTCCAATACCAGAGGAATGGCTCTTTAAGATATCTCCCCAAATCTACTGGTTGGATTTATCTTCCAATCAAATAAGCGGAAAGCTTCCGTTCCGATTCAACTCTTTTCCGAATCTGGATTCCATAGTTTTGAGCCATAATCAATTTGATGGCACTATTCCATCATCTATTTGTAGCATTCAATCTCTACAGATCCTTGCTCTGAATAACAATCAGTTATCCGGAGAATTCCCTAAAGAATGGAGTTTGTGGAGCATACAATTTGTGGATGTCTCAAACAACAATATGTCTGGTAATATTTCAAGCTCAATGGGCATTCCAAGTTCTCTTAGAATACTAAAGACAGACAACAATCAATTTAGCGGAGAAATTCCTTCTGCCTTGCAAAATTGCTCACGTTTGCAGAGACTTTATCTTGGAGGCAACAGATTTACTGGAAGCATACCTTCTTCGATAGGATCAAAAGTATCCACATTCACAGTGCTGCAATTGCAATCAAACTCTTTAAGTGGACATATTCCTCATCATTTGTGCAGTCTTCCTTTCCTTCAGATCCTAGACCTTAGTCACAATAGATTTTCAGGGACTATTCCCAACTGTTTGAATAAATTGACTTCTTTAATCTCTAGTAGTTATGGGGGCTGGAATTACTTTGGTGATTTTGAGGTAATAACTGTGACTGTAAAAGGAAGAGCAAGTGAATACTTCTTACGCAACGAGAACCAGCTTTCAGGACAGATTCCACAAAGTCTCGCTTCTCTGGCCTTCTTATCTCACTTGAACTTGTCTTGCAACAACTTGACCGAAAGAATTCCTTCGGGCAACCAACTTCAGACGCTCGATGATTCATCTATTTATGAGGGCAATCCTTCACTCTGTGGATTTCCTCTTTCAAATTGCACAGAAGATGGAGGCAACATGCATGAGCCTCATGAAGCTGATGATGAAAAGCTTGGTTTATATACCAGCGTGGTGCTTGGCTTTATCATAGGCTTTTGGAGTGTTTGTGGCACATTGATAATGAAGAAGTCATGGAGGTATGCTTATTTTCAATTTTTTGACCACATCAAAGAGAAAGTAGCACTAGCAATTGCATTGAAAGTAGCTCGTTTGAAAGCAAGGCAGTGA

Protein Analysis

897

Amino Acids

99.78

Weight (kDa)

5.8

Isoelectric Point (pI)

43.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 77 1.9e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 183 - 340 2.7e-08 Leucine-rich repeat region
LRR_14 PF23598 360 - 509 8.2e-11 Leucine-rich repeat region
LRR_8 PF13855 535 - 595 1.8e-06 Leucine rich repeat
LRR_8 PF13855 654 - 715 2.4e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1323
AasI GACNNNNNNGTC 1 cut(s) 954
AccIII TCCGGA 1 cut(s) 1787
AciI CCGC 4 cut(s) 235, 311, 1644, 1929
AclWI GGATC 6 cut(s) 158, 1182, 1195, 1753, 2032, 2113
AcsI RAATTY 9 cut(s) 490, 871, 899, 968, 979, 1199, 1793, 1935, 2376
AcuI CTGAAG 2 cut(s) 2099, 2381
AdeI CACNNNGTG 1 cut(s) 2444
AflII CTTAAG 1 cut(s) 1547
Alw21I GWGCWC 3 cut(s) 136, 398, 1533
Alw26I GTCTC 4 cut(s) 1546, 1843, 1966, 2321
AlwI GGATC 6 cut(s) 158, 1182, 1195, 1753, 2032, 2113
Ama87I CYCGRG 1 cut(s) 1564
Aor13HI TCCGGA 1 cut(s) 1787
AoxI GGCC 3 cut(s) 883, 1492, 2328
ApeKI GCWGC 4 cut(s) 204, 648, 1153, 2050
ApoI RAATTY 9 cut(s) 490, 871, 899, 968, 979, 1199, 1793, 1935, 2376
ArsI GACNNNNNNTTYG 2 cut(s) 1364, 1396
AseI ATTAAT 2 cut(s) 348, 807
Asp700I GAANNNNTTC 5 cut(s) 875, 1291, 1443, 2376, 2380
AspS9I GGNCC 4 cut(s) 781, 884, 1493, 1568
AsuC2I CCSGG 1 cut(s) 1497
AsuHPI GGTGA 1 cut(s) 2234
AvaI CYCGRG 1 cut(s) 1564
AvaII GGWCC 2 cut(s) 781, 1568
BaeGI GKGCMC 1 cut(s) 1413
BamHI GGATCC 1 cut(s) 1187
BanII GRGCYC 2 cut(s) 398, 1533
BarI GAAGNNNNNNTAC 2 cut(s) 166, 198
BauI CACGAG 1 cut(s) 1532
BbsI GAAGAC 1 cut(s) 2096
Bbv12I GWGCWC 3 cut(s) 136, 398, 1533
BbvI GCAGC 4 cut(s) 191, 660, 1165, 2037
BccI CCATC 6 cut(s) 1019, 1091, 1421, 1709, 1735, 2468
BciVI GTATCC 1 cut(s) 2044
BclI TGATCA 1 cut(s) 295
BcnI CCSGG 1 cut(s) 1497
BcoDI GTCTC 4 cut(s) 1546, 1843, 1966, 2321
BfmI CTRYAG 2 cut(s) 1151, 1754
BfrI CTTAAG 1 cut(s) 1547
BfuI GTATCC 1 cut(s) 2044
BglI GCCNNNNNGGC 1 cut(s) 1491
BisI GCNGC 4 cut(s) 205, 649, 1154, 2051
BlsI GCNGC 4 cut(s) 206, 650, 1155, 2052
Bme1390I CCNGG 1 cut(s) 1497
Bme18I GGWCC 2 cut(s) 781, 1568
BmeT110I CYCGRG 1 cut(s) 1564
BmgT120I GGNCC 4 cut(s) 781, 884, 1493, 1568
BmiI GGNNCC 4 cut(s) 886, 1189, 1495, 1569
BmrFI CCNGG 1 cut(s) 1497
BmsI GCATC 3 cut(s) 80, 1019, 1165
BoxI GACNNNNGTC 1 cut(s) 2130
BpiI GAAGAC 1 cut(s) 2096
BplI GAGNNNNNCTC 2 cut(s) 123, 155
Bpu10I CCTNAGC 1 cut(s) 644
BpuEI CTTGAG 2 cut(s) 412, 977
BpuMI CCSGG 1 cut(s) 1497
BsaBI GATNNNNATC 1 cut(s) 294
BsaI GGTCTC 1 cut(s) 1546
BsaJI CCNNGG 2 cut(s) 553, 1495
BsaWI WCCGGW 1 cut(s) 1787
BsaXI ACNNNNNCTCC 2 cut(s) 2557, 2587
Bse1I ACTGG 4 cut(s) 244, 484, 1619, 2005
Bse8I GATNNNNATC 1 cut(s) 294
BseAI TCCGGA 1 cut(s) 1787
BseDI CCNNGG 2 cut(s) 553, 1495
BseGI GGATG 4 cut(s) 834, 1102, 1223, 1840
BseJI GATNNNNATC 1 cut(s) 294
BseMII CTCAG 9 cut(s) 154, 172, 443, 854, 1133, 1180, 1258, 1310, 1518
BseNI ACTGG 4 cut(s) 244, 484, 1619, 2005
BseSI GKGCMC 1 cut(s) 1413
BseXI GCAGC 4 cut(s) 191, 660, 1165, 2037
BsgI GTGCAG 2 cut(s) 1006, 2119
BshFI GGCC 3 cut(s) 885, 1494, 2330
BsiHKAI GWGCWC 3 cut(s) 136, 398, 1533
BsiHKCI CYCGRG 1 cut(s) 1564
BsiSI CCGG 2 cut(s) 1497, 1788
BslFI GGGAC 1 cut(s) 2164
BsmAI GTCTC 4 cut(s) 1546, 1843, 1966, 2321
BsmFI GGGAC 1 cut(s) 2164
BsmI GAATGC 5 cut(s) 206, 1143, 1558, 1743, 1881
BsnI GGCC 3 cut(s) 885, 1494, 2330
Bso31I GGTCTC 1 cut(s) 1546
BsoBI CYCGRG 1 cut(s) 1564
Bsp1286I GDGCHC 4 cut(s) 136, 398, 1413, 1533
Bsp13I TCCGGA 1 cut(s) 1787
Bsp143I GATC 9 cut(s) 27, 163, 295, 859, 1187, 1240, 1758, 2024, 2118
BspACI CCGC 4 cut(s) 235, 311, 1644, 1929
BspANI GGCC 3 cut(s) 885, 1494, 2330
BspCNI CTCAG 9 cut(s) 153, 171, 444, 855, 1134, 1179, 1257, 1309, 1519
BspEI TCCGGA 1 cut(s) 1787
BspHI TCATGA 1 cut(s) 2497
BspLI GGNNCC 4 cut(s) 886, 1189, 1495, 1569
BspMAI CTGCAG 1 cut(s) 1155
BspPI GGATC 6 cut(s) 158, 1182, 1195, 1753, 2032, 2113
BspQI GCTCTTC 1 cut(s) 2251
BspTI CTTAAG 1 cut(s) 1547
BspTNI GGTCTC 1 cut(s) 1546
BsrI ACTGG 4 cut(s) 244, 484, 1619, 2005
BssECI CCNNGG 2 cut(s) 553, 1495
BssMI GATC 9 cut(s) 27, 163, 295, 859, 1187, 1240, 1758, 2024, 2118
BssSI CACGAG 1 cut(s) 1532
Bst2BI CACGAG 1 cut(s) 1532
Bst4CI ACNGT 6 cut(s) 256, 1265, 2047, 2165, 2242, 2248
Bst6I CTCTTC 4 cut(s) 117, 613, 1032, 2251
BstAFI CTTAAG 1 cut(s) 1547
BstC8I GCNNGC 3 cut(s) 132, 989, 1151
BstEII GGTNACC 1 cut(s) 524
BstF5I GGATG 4 cut(s) 834, 1102, 1223, 1840
BstKTI GATC 9 cut(s) 30, 166, 298, 862, 1190, 1243, 1761, 2027, 2121
BstMAI GTCTC 4 cut(s) 1546, 1843, 1966, 2321
BstMBI GATC 9 cut(s) 27, 163, 295, 859, 1187, 1240, 1758, 2024, 2118
BstMWI GCNNNNNNNGC 5 cut(s) 234, 1491, 1878, 2056, 2327
BstNSI RCATGY 2 cut(s) 685, 2488
BstPAI GACNNNNGTC 1 cut(s) 2130
BstPI GGTNACC 1 cut(s) 524
BstSCI CCNGG 1 cut(s) 1495
BstSFI CTRYAG 2 cut(s) 1151, 1754
BstSLI GKGCMC 1 cut(s) 1413
BstV1I GCAGC 4 cut(s) 191, 660, 1165, 2037
BstV2I GAAGAC 1 cut(s) 2096
BstX2I RGATCY 3 cut(s) 1187, 1758, 2118
BstXI CCANNNNNNTGG 1 cut(s) 1584
BstYI RGATCY 3 cut(s) 1187, 1758, 2118
BsuI GTATCC 1 cut(s) 2044
BsuRI GGCC 3 cut(s) 885, 1494, 2330
BtsCI GGATG 4 cut(s) 834, 1102, 1223, 1840
BtsI GCAGTG 1 cut(s) 100
BtsIMutI CAGTG 7 cut(s) 100, 166, 237, 285, 305, 886, 2052
Cac8I GCNNGC 3 cut(s) 132, 989, 1151
CciI TCATGA 1 cut(s) 2497
Cfr13I GGNCC 4 cut(s) 781, 884, 1493, 1568
CseI GACGC 1 cut(s) 2410
CspCI CAANNNNNGTGG 2 cut(s) 955, 990
DpnI GATC 9 cut(s) 29, 165, 297, 861, 1189, 1242, 1760, 2026, 2120
DpnII GATC 9 cut(s) 27, 163, 295, 859, 1187, 1240, 1758, 2024, 2118
DraI TTTAAA 1 cut(s) 148
DraIII CACNNNGTG 1 cut(s) 2444
DrdI GACNNNNNNGTC 1 cut(s) 954
DseDI GACNNNNNNGTC 1 cut(s) 954
Eam1104I CTCTTC 4 cut(s) 117, 613, 1032, 2251
EarI CTCTTC 4 cut(s) 117, 613, 1032, 2251
EciI GGCGGA 1 cut(s) 326
Ecl136II GAGCTC 2 cut(s) 396, 1531
Eco24I GRGCYC 2 cut(s) 398, 1533
Eco31I GGTCTC 1 cut(s) 1546
Eco32I GATATC 3 cut(s) 7, 458, 1599
Eco47I GGWCC 2 cut(s) 781, 1568
Eco53kI GAGCTC 2 cut(s) 396, 1531
Eco57I CTGAAG 2 cut(s) 2099, 2381
Eco88I CYCGRG 1 cut(s) 1564
Eco91I GGTNACC 1 cut(s) 524
EcoICRI GAGCTC 2 cut(s) 396, 1531
EcoO109I RGGNCCY 1 cut(s) 1493
EcoO65I GGTNACC 1 cut(s) 524
EcoRI GAATTC 4 cut(s) 490, 871, 1793, 2376
EcoRV GATATC 3 cut(s) 7, 458, 1599
EcoT22I ATGCAT 2 cut(s) 116, 2490
EcoT38I GRGCYC 2 cut(s) 398, 1533
FalI AAGNNNNNCTT 8 cut(s) 945, 977, 1996, 2028, 2305, 2337, 2365, 2397
FaqI GGGAC 1 cut(s) 2164
FbaI TGATCA 1 cut(s) 295
Fnu4HI GCNGC 4 cut(s) 205, 649, 1154, 2051
FokI GGATG 4 cut(s) 841, 1109, 1210, 1847
FriOI GRGCYC 2 cut(s) 398, 1533
Fsp4HI GCNGC 4 cut(s) 205, 649, 1154, 2051
GluI GCNGC 4 cut(s) 205, 649, 1154, 2051
HaeIII GGCC 3 cut(s) 885, 1494, 2330
HapII CCGG 2 cut(s) 1497, 1788
HgaI GACGC 1 cut(s) 2410
HincII GTYRAC 3 cut(s) 259, 679, 959
HindII GTYRAC 3 cut(s) 259, 679, 959
HindIII AAGCTT 3 cut(s) 176, 1649, 2516
HpaI GTTAAC 1 cut(s) 679
HpaII CCGG 2 cut(s) 1497, 1788
HphI GGTGA 1 cut(s) 2234
Hpy166II GTNNAC 6 cut(s) 16, 259, 640, 679, 959, 2078
Hpy188I TCNGA 7 cut(s) 453, 864, 1661, 1677, 1770, 2118, 2400
Hpy8I GTNNAC 6 cut(s) 16, 259, 640, 679, 959, 2078
HpyCH4III ACNGT 6 cut(s) 256, 1265, 2047, 2165, 2242, 2248
HpyCH4IV ACGT 1 cut(s) 1963
HpyF10VI GCNNNNNNNGC 5 cut(s) 234, 1491, 1878, 2056, 2327
HpySE526I ACGT 1 cut(s) 1963
Kpn2I TCCGGA 1 cut(s) 1787
Ksp22I TGATCA 1 cut(s) 295
KspAI GTTAAC 1 cut(s) 679
Kzo9I GATC 9 cut(s) 27, 163, 295, 859, 1187, 1240, 1758, 2024, 2118
LguI GCTCTTC 1 cut(s) 2251
LmnI GCTCC 3 cut(s) 439, 1464, 1818
Lsp1109I GCAGC 4 cut(s) 191, 660, 1165, 2037
LweI GCATC 3 cut(s) 80, 1019, 1165
MaeII ACGT 1 cut(s) 1963
MaeIII GTNAC 6 cut(s) 194, 380, 524, 1083, 2132, 2242
MalI GATC 9 cut(s) 29, 165, 297, 861, 1189, 1242, 1760, 2026, 2120
MboI GATC 9 cut(s) 27, 163, 295, 859, 1187, 1240, 1758, 2024, 2118
MfeI CAATTG 2 cut(s) 2054, 2655
MflI RGATCY 3 cut(s) 1187, 1758, 2118
MhlI GDGCHC 4 cut(s) 136, 398, 1413, 1533
MlyI GAGTC 4 cut(s) 903, 942, 1091, 1388
MmeI TCCRAC 1 cut(s) 1599
Mph1103I ATGCAT 2 cut(s) 116, 2490
MroI TCCGGA 1 cut(s) 1787
MroXI GAANNNNTTC 5 cut(s) 875, 1291, 1443, 2376, 2380
MslI CAYNNNNRTG 2 cut(s) 76, 1472
MspCI CTTAAG 1 cut(s) 1547
MspI CCGG 2 cut(s) 1497, 1788
MspR9I CCNGG 1 cut(s) 1497
MunI CAATTG 2 cut(s) 2054, 2655
Mva1269I GAATGC 5 cut(s) 206, 1143, 1558, 1743, 1881
MwoI GCNNNNNNNGC 5 cut(s) 234, 1491, 1878, 2056, 2327
NciI CCSGG 1 cut(s) 1497
NdeII GATC 9 cut(s) 27, 163, 295, 859, 1187, 1240, 1758, 2024, 2118
NlaIV GGNNCC 4 cut(s) 886, 1189, 1495, 1569
NmeAIII GCCGAG 1 cut(s) 1511
NmuCI GTSAC 4 cut(s) 194, 1083, 2132, 2242
NsiI ATGCAT 2 cut(s) 116, 2490
NspI RCATGY 2 cut(s) 685, 2488
PacI TTAATTAA 1 cut(s) 348
PagI TCATGA 1 cut(s) 2497
PciSI GCTCTTC 1 cut(s) 2251
PctI GAATGC 5 cut(s) 206, 1143, 1558, 1743, 1881
PdmI GAANNNNTTC 5 cut(s) 875, 1291, 1443, 2376, 2380
PkrI GCNGC 4 cut(s) 206, 650, 1155, 2052
PleI GAGTC 4 cut(s) 903, 942, 1090, 1387
PpsI GAGTC 4 cut(s) 903, 942, 1090, 1387
PshAI GACNNNNGTC 1 cut(s) 2130
PshBI ATTAAT 2 cut(s) 348, 807
PsiI TTATAA 1 cut(s) 1323
Psp124BI GAGCTC 2 cut(s) 398, 1533
PspEI GGTNACC 1 cut(s) 524
PspN4I GGNNCC 4 cut(s) 886, 1189, 1495, 1569
PspPI GGNCC 4 cut(s) 781, 884, 1493, 1568
PstI CTGCAG 1 cut(s) 1155
PsuI RGATCY 3 cut(s) 1187, 1758, 2118
RseI CAYNNNNRTG 2 cut(s) 76, 1472
SacI GAGCTC 2 cut(s) 398, 1533
SapI GCTCTTC 1 cut(s) 2251
SatI GCNGC 4 cut(s) 205, 649, 1154, 2051
Sau3AI GATC 9 cut(s) 27, 163, 295, 859, 1187, 1240, 1758, 2024, 2118
Sau96I GGNCC 4 cut(s) 781, 884, 1493, 1568
SchI GAGTC 4 cut(s) 903, 942, 1091, 1388
ScrFI CCNGG 1 cut(s) 1497
SduI GDGCHC 4 cut(s) 136, 398, 1413, 1533
SfaNI GCATC 3 cut(s) 80, 1019, 1165
SfcI CTRYAG 2 cut(s) 1151, 1754
SinI GGWCC 2 cut(s) 781, 1568
SmiMI CAYNNNNRTG 2 cut(s) 76, 1472
SmlI CTYRAG 3 cut(s) 391, 992, 1547
SmoI CTYRAG 3 cut(s) 391, 992, 1547
SsiI CCGC 4 cut(s) 235, 311, 1644, 1929
SspI AATATT 3 cut(s) 466, 1255, 1864
SstI GAGCTC 2 cut(s) 398, 1533
StyD4I CCNGG 1 cut(s) 1495
TaaI ACNGT 6 cut(s) 256, 1265, 2047, 2165, 2242, 2248
TaiI ACGT 1 cut(s) 1966
TaqI TCGA 5 cut(s) 398, 1013, 1268, 2018, 2406
TaqII GACCGA 1 cut(s) 2384
TscAI CASTG 7 cut(s) 100, 166, 244, 292, 305, 886, 2052
TseFI GTSAC 4 cut(s) 194, 1083, 2132, 2242
TseI GCWGC 4 cut(s) 204, 648, 1153, 2050
Tsp45I GTSAC 4 cut(s) 194, 1083, 2132, 2242
TspGWI ACGGA 2 cut(s) 254, 1644
TspRI CASTG 7 cut(s) 100, 166, 244, 292, 305, 886, 2052
Vha464I CTTAAG 1 cut(s) 1547
VpaK11BI GGWCC 2 cut(s) 781, 1568
VspI ATTAAT 2 cut(s) 348, 807
XapI RAATTY 9 cut(s) 490, 871, 899, 968, 979, 1199, 1793, 1935, 2376
XbaI TCTAGA 1 cut(s) 919
XceI RCATGY 2 cut(s) 685, 2488
XmnI GAANNNNTTC 5 cut(s) 875, 1291, 1443, 2376, 2380
Zsp2I ATGCAT 2 cut(s) 116, 2490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.