Rroxscaffold_1G00056470

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
78215718 .. 78224032
8315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00056470.1

Sequence Viewer

Length: 1311 bp
ATGAACTCCCCATCTTTAGAGTATATAAATTTGAGACATAATCGATTTGAGGGCCCTCTCCCACATTGGTCTAGTGATGCTGCCGAATATATCGATCTTCAAAGCAATTTATTTTCCGGGCCGATTCCCTCAAACTTTGATCAATTGTTGCCTAACTTGTCAGTTTTATATCTATCTGACAATCATCTGAACGGTAGTATAGCCCTCTCTTTGAGCAACCTGTCAAGTTTGAGGATCCTTGTGTTAAGAAGCAATCACTTGTCCGGAGAATTTCCTCGAGCATGGAGTCTCTGGCCAGATATATTGGTTGTAGATGTCTCAGACAACAATTTCGAGTTGCTGAGTATTGATCTTGGAGGCAATAGATTTACTGGAAGCATACCTTTACAGACAAGACCAAATGTATCATATGAATTTTATATGCTAGGATTGCGATCCAACTCTTTAAGCGGACATATCCCCCATCAACTGTGCTCTCTTCCGTCTCTTCACATCATAGACCTTGCCCACAACAAATTTTCAGGGACCATTCCCAAGTGTTTGTATAATCTGACTGCTCTGGTCTACGGTAATGGCACCTTTACTTTTCGTAATATTGAGACCGACATGACATGGATGCCTAGTAATATTTACCCGTTCAGCTTGAGTTATATTGAGACGGCCAGCTTGACATTGAAGGGACAAGAACTCATATATAACTGGACTCTGAATTTGGTGAATAGCATTGATTTCTCATCAAACAACTTAGAAGGAGTAATCCCTGACGAAGTAAGCAGCCTCATTGCATTGGGCACGTTGAACTTGTCAAGAAATCAACTAACTGGAAACATTCCCTCAAAGATTGGAAACTTGCGGCAGCTGGAAACTCTTGATCTCTCACACAATCACCTCTCCGGACGGATTCCTCAGAGTTTATCTTCGTTAACCTTGTTGGCTCACCTGAACTTGTCTTTCAACAACTTGTCCGGAAGAATTCCTTCAGGTAACCAACTTCAAACACTTGATGATTCATCCATTTACAAGGGCAACCCATCCTTGTGTGGGGTTCCTCTTCCAACTGTCTGCCCGGGAGATGGCGCACTCGCACTAGCTGACCCTGACGATGGTGATCATAATGATGATGAGAATGGGAAGTTTGGTATCGTCGTTAGCGCTGTCCTCGGCTTCATCATAGGCTTCTGGAGTGTCTGTGGCACATTGGTTATGAAGAAATCATGGAGGTATGCCTATTTTCGATTCTTTGATAACATAAAGGAGAAGGCAGCATTAGCAATTGCATTGAGAGTGGCTCGTTGGCAAAGGAAGACTTGA

Protein Analysis

436

Amino Acids

48.27

Weight (kDa)

5.82

Isoelectric Point (pI)

41.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 250 - 339 7.6e-08 Leucine-rich repeat region
LRR_8 PF13855 265 - 321 5.4e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 575
AccI GTMKAC 1 cut(s) 564
AccIII TCCGGA 3 cut(s) 263, 893, 965
AciI CCGC 2 cut(s) 450, 853
AclWI GGATC 3 cut(s) 229, 242, 429
AcoI YGGCCR 2 cut(s) 293, 660
AcsI RAATTY 6 cut(s) 28, 269, 413, 515, 709, 972
AcuI CTGAAG 1 cut(s) 963
AfeI AGCGCT 1 cut(s) 1153
AfiI CCNNNNNNNGG 3 cut(s) 1041, 1073, 1103
AgsI TTSAA 5 cut(s) 101, 676, 799, 955, 995
AluBI AGCT 4 cut(s) 642, 666, 859, 1091
AluI AGCT 4 cut(s) 642, 666, 859, 1091
Alw21I GWGCWC 1 cut(s) 476
Alw26I GTCTC 6 cut(s) 28, 293, 322, 489, 593, 650
AlwI GGATC 3 cut(s) 229, 242, 429
Ama87I CYCGRG 2 cut(s) 276, 1066
Aor13HI TCCGGA 3 cut(s) 263, 893, 965
Aor51HI AGCGCT 1 cut(s) 1153
AoxI GGCC 4 cut(s) 52, 119, 293, 660
ApaI GGGCCC 1 cut(s) 56
ApeKI GCWGC 4 cut(s) 80, 774, 856, 1262
ApoI RAATTY 6 cut(s) 28, 269, 413, 515, 709, 972
ArsI GACNNNNNNTTYG 4 cut(s) 314, 346, 694, 726
Asp700I GAANNNNTTC 1 cut(s) 976
AspLEI GCGC 2 cut(s) 1079, 1154
AspS9I GGNCC 4 cut(s) 52, 53, 119, 525
AsuC2I CCSGG 3 cut(s) 118, 1067, 1068
AsuHPI GGTGA 4 cut(s) 727, 878, 929, 1118
AvaI CYCGRG 2 cut(s) 276, 1066
AvaII GGWCC 1 cut(s) 525
BaeGI GKGCMC 2 cut(s) 56, 794
BalI TGGCCA 1 cut(s) 295
BamHI GGATCC 1 cut(s) 234
BanI GGYRCC 1 cut(s) 575
BanII GRGCYC 1 cut(s) 56
Bbv12I GWGCWC 1 cut(s) 476
BbvI GCAGC 4 cut(s) 67, 786, 868, 1274
BccI CCATC 5 cut(s) 19, 471, 1039, 1067, 1097
BceAI ACGGC 1 cut(s) 675
BclI TGATCA 2 cut(s) 139, 1108
BcnI CCSGG 3 cut(s) 118, 1067, 1068
BcoDI GTCTC 6 cut(s) 28, 293, 322, 489, 593, 650
BfaI CTAG 4 cut(s) 72, 425, 621, 1088
BfoI RGCGCY 1 cut(s) 1155
BisI GCNGC 5 cut(s) 81, 775, 854, 857, 1263
BlsI GCNGC 5 cut(s) 82, 776, 855, 858, 1264
Bme1390I CCNGG 3 cut(s) 118, 1067, 1068
Bme18I GGWCC 1 cut(s) 525
BmeT110I CYCGRG 2 cut(s) 276, 1066
BmgT120I GGNCC 4 cut(s) 52, 53, 119, 525
BmiI GGNNCC 5 cut(s) 54, 236, 526, 577, 1047
BmrFI CCNGG 3 cut(s) 118, 1067, 1068
BmsI GCATC 2 cut(s) 67, 606
BplI GAGNNNNNCTC 2 cut(s) 1273, 1305
BpmI CTGGAG 1 cut(s) 1201
BpuEI CTTGAG 1 cut(s) 664
BpuMI CCSGG 3 cut(s) 118, 1067, 1068
Bsa29I ATCGAT 2 cut(s) 43, 93
BsaBI GATNNNNATC 2 cut(s) 433, 1107
BsaI GGTCTC 1 cut(s) 593
BsaJI CCNNGG 2 cut(s) 1066, 1159
BsaWI WCCGGW 3 cut(s) 263, 893, 965
BsaXI ACNNNNNCTCC 2 cut(s) 1174, 1204
Bsc4I CCNNNNNNNGG 3 cut(s) 1041, 1073, 1103
Bse1I ACTGG 3 cut(s) 376, 704, 826
Bse3DI GCAATG 1 cut(s) 780
Bse8I GATNNNNATC 2 cut(s) 433, 1107
BseAI TCCGGA 3 cut(s) 263, 893, 965
BseCI ATCGAT 2 cut(s) 43, 93
BseDI CCNNGG 2 cut(s) 1066, 1159
BseGI GGATG 3 cut(s) 621, 1010, 1031
BseJI GATNNNNATC 2 cut(s) 433, 1107
BseLI CCNNNNNNNGG 3 cut(s) 1041, 1073, 1103
BseMI GCAATG 1 cut(s) 780
BseMII CTCAG 3 cut(s) 332, 333, 920
BseNI ACTGG 3 cut(s) 376, 704, 826
BseSI GKGCMC 2 cut(s) 56, 794
BseXI GCAGC 4 cut(s) 67, 786, 868, 1274
BshFI GGCC 4 cut(s) 54, 121, 295, 662
BshNI GGYRCC 1 cut(s) 575
BshVI ATCGAT 2 cut(s) 43, 93
BsiHKAI GWGCWC 1 cut(s) 476
BsiHKCI CYCGRG 2 cut(s) 276, 1066
BsiSI CCGG 5 cut(s) 117, 264, 894, 966, 1067
BslFI GGGAC 2 cut(s) 538, 693
BslI CCNNNNNNNGG 3 cut(s) 1041, 1073, 1103
BsmAI GTCTC 6 cut(s) 28, 293, 322, 489, 593, 650
BsmBI CGTCTC 2 cut(s) 489, 650
BsmFI GGGAC 2 cut(s) 538, 693
BsnI GGCC 4 cut(s) 54, 121, 295, 662
Bso31I GGTCTC 1 cut(s) 593
BsoBI CYCGRG 2 cut(s) 276, 1066
Bsp120I GGGCCC 1 cut(s) 52
Bsp1286I GDGCHC 3 cut(s) 56, 476, 794
Bsp13I TCCGGA 3 cut(s) 263, 893, 965
Bsp143I GATC 7 cut(s) 94, 139, 234, 349, 434, 871, 1108
BspACI CCGC 2 cut(s) 450, 853
BspANI GGCC 4 cut(s) 54, 121, 295, 662
BspCNI CTCAG 3 cut(s) 332, 333, 919
BspDI ATCGAT 2 cut(s) 43, 93
BspEI TCCGGA 3 cut(s) 263, 893, 965
BspLI GGNNCC 5 cut(s) 54, 236, 526, 577, 1047
BspPI GGATC 3 cut(s) 229, 242, 429
BspT107I GGYRCC 1 cut(s) 575
BspTNI GGTCTC 1 cut(s) 593
BsrDI GCAATG 1 cut(s) 780
BsrI ACTGG 3 cut(s) 376, 704, 826
BssECI CCNNGG 2 cut(s) 1066, 1159
BssMI GATC 7 cut(s) 94, 139, 234, 349, 434, 871, 1108
Bst4CI ACNGT 4 cut(s) 194, 471, 569, 1060
Bst6I CTCTTC 3 cut(s) 483, 492, 1056
BstC8I GCNNGC 1 cut(s) 664
BstDEI CTNAG 4 cut(s) 319, 341, 745, 906
BstEII GGTNACC 1 cut(s) 983
BstF5I GGATG 3 cut(s) 621, 1010, 1031
BstH2I RGCGCY 1 cut(s) 1155
BstHHI GCGC 2 cut(s) 1079, 1154
BstKTI GATC 7 cut(s) 97, 142, 237, 352, 437, 874, 1111
BstMAI GTCTC 6 cut(s) 28, 293, 322, 489, 593, 650
BstMBI GATC 7 cut(s) 94, 139, 234, 349, 434, 871, 1108
BstMWI GCNNNNNNNGC 2 cut(s) 430, 1268
BstPI GGTNACC 1 cut(s) 983
BstSCI CCNGG 3 cut(s) 116, 1065, 1066
BstSLI GKGCMC 2 cut(s) 56, 794
BstV1I GCAGC 4 cut(s) 67, 786, 868, 1274
BstX2I RGATCY 1 cut(s) 234
BstYI RGATCY 1 cut(s) 234
Bsu15I ATCGAT 2 cut(s) 43, 93
BsuRI GGCC 4 cut(s) 54, 121, 295, 662
BsuTUI ATCGAT 2 cut(s) 43, 93
BtsCI GGATG 3 cut(s) 621, 1010, 1031
Cac8I GCNNGC 1 cut(s) 664
CfoI GCGC 2 cut(s) 1079, 1154
Cfr13I GGNCC 4 cut(s) 52, 53, 119, 525
Cfr9I CCCGGG 1 cut(s) 1066
ClaI ATCGAT 2 cut(s) 43, 93
CviAII CATG 4 cut(s) 282, 607, 612, 1215
DdeI CTNAG 4 cut(s) 319, 341, 745, 906
DpnI GATC 7 cut(s) 96, 141, 236, 351, 436, 873, 1110
DpnII GATC 7 cut(s) 94, 139, 234, 349, 434, 871, 1108
EaeI YGGCCR 2 cut(s) 293, 660
Eam1104I CTCTTC 3 cut(s) 483, 492, 1056
EarI CTCTTC 3 cut(s) 483, 492, 1056
Eco24I GRGCYC 1 cut(s) 56
Eco31I GGTCTC 1 cut(s) 593
Eco47I GGWCC 1 cut(s) 525
Eco47III AGCGCT 1 cut(s) 1153
Eco57I CTGAAG 1 cut(s) 963
Eco88I CYCGRG 2 cut(s) 276, 1066
Eco91I GGTNACC 1 cut(s) 983
EcoO109I RGGNCCY 2 cut(s) 52, 53
EcoO65I GGTNACC 1 cut(s) 983
EcoRI GAATTC 1 cut(s) 972
EcoT38I GRGCYC 1 cut(s) 56
Esp3I CGTCTC 2 cut(s) 489, 650
FaeI CATG 4 cut(s) 285, 610, 615, 1218
FalI AAGNNNNNCTT 5 cut(s) 367, 399, 961, 993, 1291
FaqI GGGAC 2 cut(s) 538, 693
FatI CATG 4 cut(s) 281, 606, 611, 1214
FauNDI CATATG 1 cut(s) 409
FbaI TGATCA 2 cut(s) 139, 1108
FblI GTMKAC 1 cut(s) 564
Fnu4HI GCNGC 5 cut(s) 81, 775, 854, 857, 1263
FokI GGATG 3 cut(s) 628, 997, 1018
FriOI GRGCYC 1 cut(s) 56
Fsp4HI GCNGC 5 cut(s) 81, 775, 854, 857, 1263
FspBI CTAG 4 cut(s) 72, 425, 621, 1088
GlaI GCGC 2 cut(s) 1078, 1153
GluI GCNGC 5 cut(s) 81, 775, 854, 857, 1263
GsuI CTGGAG 1 cut(s) 1201
HaeII RGCGCY 1 cut(s) 1155
HaeIII GGCC 4 cut(s) 54, 121, 295, 662
HapII CCGG 5 cut(s) 117, 264, 894, 966, 1067
HhaI GCGC 2 cut(s) 1079, 1154
Hin1II CATG 4 cut(s) 285, 610, 615, 1218
Hin6I GCGC 2 cut(s) 1077, 1152
HinP1I GCGC 2 cut(s) 1077, 1152
HincII GTYRAC 1 cut(s) 924
HindII GTYRAC 1 cut(s) 924
HinfI GANTC 6 cut(s) 124, 286, 703, 901, 1007, 1236
HpaI GTTAAC 1 cut(s) 924
HpaII CCGG 5 cut(s) 117, 264, 894, 966, 1067
HphI GGTGA 4 cut(s) 727, 878, 929, 1118
Hpy166II GTNNAC 2 cut(s) 565, 924
Hpy188I TCNGA 6 cut(s) 178, 189, 322, 552, 708, 909
Hpy188III TCNNGA 6 cut(s) 264, 807, 869, 894, 966, 1180
Hpy8I GTNNAC 2 cut(s) 565, 924
Hpy99I CGWCG 1 cut(s) 1148
HpyAV CCTTC 4 cut(s) 670, 743, 987, 1252
HpyCH4III ACNGT 4 cut(s) 194, 471, 569, 1060
HpyCH4IV ACGT 1 cut(s) 794
HpyCH4V TGCA 2 cut(s) 785, 1277
HpyF10VI GCNNNNNNNGC 2 cut(s) 430, 1268
HpyF3I CTNAG 4 cut(s) 319, 341, 745, 906
HpySE526I ACGT 1 cut(s) 794
Hsp92II CATG 4 cut(s) 285, 610, 615, 1218
HspAI GCGC 2 cut(s) 1077, 1152
Kpn2I TCCGGA 3 cut(s) 263, 893, 965
Ksp22I TGATCA 2 cut(s) 139, 1108
KspAI GTTAAC 1 cut(s) 924
Kzo9I GATC 7 cut(s) 94, 139, 234, 349, 434, 871, 1108
Lsp1109I GCAGC 4 cut(s) 67, 786, 868, 1274
LweI GCATC 2 cut(s) 67, 606
MaeI CTAG 4 cut(s) 72, 425, 621, 1088
MaeII ACGT 1 cut(s) 794
MaeIII GTNAC 1 cut(s) 983
MalI GATC 7 cut(s) 96, 141, 236, 351, 436, 873, 1110
MboI GATC 7 cut(s) 94, 139, 234, 349, 434, 871, 1108
MboII GAAGA 7 cut(s) 89, 470, 479, 909, 981, 1043, 1219
MfeI CAATTG 2 cut(s) 143, 1272
MflI RGATCY 1 cut(s) 234
MhlI GDGCHC 3 cut(s) 56, 476, 794
MlsI TGGCCA 1 cut(s) 295
MluNI TGGCCA 1 cut(s) 295
MlyI GAGTC 2 cut(s) 295, 697
MmeI TCCRAC 2 cut(s) 462, 1079
Mox20I TGGCCA 1 cut(s) 295
MroI TCCGGA 3 cut(s) 263, 893, 965
MroXI GAANNNNTTC 1 cut(s) 976
MscI TGGCCA 1 cut(s) 295
MseI TTAA 3 cut(s) 245, 446, 923
MslI CAYNNNNRTG 2 cut(s) 1036, 1116
Msp20I TGGCCA 1 cut(s) 295
MspA1I CMGCKG 1 cut(s) 859
MspI CCGG 5 cut(s) 117, 264, 894, 966, 1067
MspR9I CCNGG 3 cut(s) 118, 1067, 1068
MunI CAATTG 2 cut(s) 143, 1272
MwoI GCNNNNNNNGC 2 cut(s) 430, 1268
NciI CCSGG 3 cut(s) 118, 1067, 1068
NdeI CATATG 1 cut(s) 409
NdeII GATC 7 cut(s) 94, 139, 234, 349, 434, 871, 1108
NlaIII CATG 4 cut(s) 285, 610, 615, 1218
NlaIV GGNNCC 5 cut(s) 54, 236, 526, 577, 1047
NmeAIII GCCGAG 1 cut(s) 1140
PaeR7I CTCGAG 1 cut(s) 276
PdmI GAANNNNTTC 1 cut(s) 976
PfeI GAWTC 4 cut(s) 124, 901, 1007, 1236
PkrI GCNGC 5 cut(s) 82, 776, 855, 858, 1264
PleI GAGTC 2 cut(s) 294, 697
PpsI GAGTC 2 cut(s) 294, 697
PspEI GGTNACC 1 cut(s) 983
PspN4I GGNNCC 5 cut(s) 54, 236, 526, 577, 1047
PspOMI GGGCCC 1 cut(s) 52
PspPI GGNCC 4 cut(s) 52, 53, 119, 525
PspXI VCTCGAGB 1 cut(s) 276
PsuI RGATCY 1 cut(s) 234
PvuII CAGCTG 1 cut(s) 859
RseI CAYNNNNRTG 2 cut(s) 1036, 1116
SaqAI TTAA 3 cut(s) 245, 446, 923
SatI GCNGC 5 cut(s) 81, 775, 854, 857, 1263
Sau3AI GATC 7 cut(s) 94, 139, 234, 349, 434, 871, 1108
Sau96I GGNCC 4 cut(s) 52, 53, 119, 525
SchI GAGTC 2 cut(s) 295, 697
ScrFI CCNGG 3 cut(s) 118, 1067, 1068
SduI GDGCHC 3 cut(s) 56, 476, 794
SfaNI GCATC 2 cut(s) 67, 606
Sfr274I CTCGAG 1 cut(s) 276
SinI GGWCC 1 cut(s) 525
SlaI CTCGAG 1 cut(s) 276
SmaI CCCGGG 1 cut(s) 1068
SmiMI CAYNNNNRTG 2 cut(s) 1036, 1116
SmlI CTYRAG 2 cut(s) 276, 643
SmoI CTYRAG 2 cut(s) 276, 643
SsiI CCGC 2 cut(s) 450, 853
SspI AATATT 2 cut(s) 595, 628
SspMI CTAG 4 cut(s) 72, 425, 621, 1088
StyD4I CCNGG 3 cut(s) 116, 1065, 1066
TaaI ACNGT 4 cut(s) 194, 471, 569, 1060
TaiI ACGT 1 cut(s) 797
TaqI TCGA 5 cut(s) 43, 93, 277, 333, 1234
TaqII GACCGA 1 cut(s) 617
TauI GCSGC 1 cut(s) 856
TfiI GAWTC 4 cut(s) 124, 901, 1007, 1236
Tru1I TTAA 3 cut(s) 245, 446, 923
Tru9I TTAA 3 cut(s) 245, 446, 923
TseI GCWGC 4 cut(s) 80, 774, 856, 1262
TspDTI ATGAA 5 cut(s) 17, 426, 999, 1156, 1220
TspGWI ACGGA 2 cut(s) 471, 913
TspMI CCCGGG 1 cut(s) 1066
VpaK11BI GGWCC 1 cut(s) 525
XapI RAATTY 6 cut(s) 28, 269, 413, 515, 709, 972
XhoI CTCGAG 1 cut(s) 276
XmaI CCCGGG 1 cut(s) 1066
XmiI GTMKAC 1 cut(s) 564
XmnI GAANNNNTTC 1 cut(s) 976
XspI CTAG 4 cut(s) 72, 425, 621, 1088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.