pycom05g20590

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
23342049 .. 23343593
1545 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g20590.1

Sequence Viewer

Length: 1545 bp
ATGGATACCTTGTTTGCAAAAAGCTTATTCAATCACCTCAATATTTCTCACTCTTTTCTCGTTTTGTTTTTGGCATCTACGTATCTACCTACTGCTGTGATCTGCTTGGGTGGTATCGGAGTTCCGAGCAGTGGCACTGTGAAACCATTATGCATTGAGGAAGAAAGGCGAGCGCTTGTCAGCTTTAAACAACACCTTGTTGATCCTTCTGGTAGGCTTTCTTCTTGGGTGGGTCATGATTGCTGTCAATGGGAAGGAGTTTCATGCAACAACCACACCGGTCATGTCGGCAAGATGGACCTCCGGAACACGTATTCCTTTTTTGATGGAGAGCAGGGCGAGTCGGCTTATGAAAAGTCTTGCTTGGGAGGTAAGATAAATGCTTCTTTGCTTAGCTTGAAACATTTAAAATACCTGGACCTAAGCAATAACGATTTTCATGGCACTCGCATTCCGATGTTCTTTGGGGAGCTTAAAAGTTTGCAATATCTCAATCTCTCCTTTGCATCATTTGAGGGAGAGATTCCCCCTTCTCTTGGTAACCTGTCAAGTTTGGATATTCTTGATCTCGGGGTAAATTACCTCTTACGTTCTAGAAACATGACTTGGCTTTCTCACCTCTCTTCCCTAAAATACCTTAATCTCAATTACCTGGACCTTCGCCTCACAGGAGTCAGTTGGGCATATGATTTTAACATGCTTCCTTCATTGTTAGAGTTACACTTATCTTCCTGCCAAATTGAAAGCATTCCACTCTCATTGCAGACGATTAACTTCCTTCCACTCTCACTACAAAGGATTAACTTTACATCACTTTTGGTCCTTGATATGTCGAATAACAATATTAAAAGTTCATTTCCCAGTTGGTTTTTTAACCTTACCAGCCTCGTAACACTTGATCTATCTGGAAATGATTTGAGTGATCATTTTCCGAGTGAATTTGCAAACTTCAAATCTCTGGAATATCTTGATTTGTCTTCTACGGGCCTAATCGGTCAAATTCCCAAGGAAATTGGAAAGATGTGCAAGCTAAAGTTTTTAAGTCTTACCCAAAACAATTTTGATGGGGGAATGGAAGAGTTTTGGAAGAGTTTCTCAAGTTGTCCAAATAATACATTGGAGTCACTAGATTTATCCTTTTGTTCGATGCAAAGCCAACTGCCAGCCTCCTTAGGAATGTTAAAAAGTTTGCAGTATCTCAACCTCATGTACAATAATTTGTGGGGCTCAATTCCAAATTCCATTGGAAACTTGTCATCCTTGAAAACATTGGTCCTCTCTGATAATAATATGAATGGCTTCATTCCACAAAGTATGGGGCAACTCATTAATCTAGTTTCCCTAAATCTGTTTTATAATTCATGGGAAGGCGTTCTCACAGAAGCCCATTTCATAAATCTTACTAGATTACAAGATTTTCAAGTAGGAGATGCAAGACGACCAATGTCCCTCATTTTCAACATGGCTTACAATTGGGTTCCTCCTTTCAAGCTCCACACAATTGTGATCCTAAATTGTCGGGTAAGTCATGGTTTTGGGGTATGA

Protein Analysis

515

Amino Acids

57.62

Weight (kDa)

5.95

Isoelectric Point (pI)

37.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 53 - 90 2.3e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 129 - 212 2.9e-08 Leucine-rich repeat region
LRR_14 PF23598 257 - 359 1.4e-07 Leucine-rich repeat region
LRR_8 PF13855 269 - 306 1.6e-07 Leucine rich repeat
LRR_4 PF12799 270 - 308 1.6e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 373 - 505 1e-10 Leucine-rich repeat region
LRR_8 PF13855 396 - 453 1.7e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1356
AccIII TCCGGA 1 cut(s) 303
AclWI GGATC 2 cut(s) 197, 1501
AcsI RAATTY 3 cut(s) 938, 999, 1237
AfaI GTAC 1 cut(s) 1211
AfeI AGCGCT 1 cut(s) 174
AfiI CCNNNNNNNGG 2 cut(s) 131, 536
AflIII ACRYGT 1 cut(s) 309
AgeI ACCGGT 1 cut(s) 278
AgsI TTSAA 8 cut(s) 31, 400, 743, 952, 1264, 1421, 1459, 1489
AjnI CCWGG 2 cut(s) 414, 651
AjuI GAANNNNNNNTTGG 2 cut(s) 589, 621
AleI CACNNNNGTG 1 cut(s) 1502
AloI GAACNNNNNNTCC 2 cut(s) 299, 331
AluBI AGCT 6 cut(s) 24, 183, 396, 472, 1030, 1492
AluI AGCT 6 cut(s) 24, 183, 396, 472, 1030, 1492
AlwI GGATC 2 cut(s) 197, 1501
Ama87I CYCGRG 1 cut(s) 569
Aor13HI TCCGGA 1 cut(s) 303
Aor51HI AGCGCT 1 cut(s) 174
AoxI GGCC 1 cut(s) 985
ApoI RAATTY 3 cut(s) 938, 999, 1237
AseI ATTAAT 1 cut(s) 1329
AsiGI ACCGGT 1 cut(s) 278
Asp700I GAANNNNTTC 4 cut(s) 747, 1091, 1298, 1371
AspLEI GCGC 1 cut(s) 175
AspS9I GGNCC 6 cut(s) 298, 418, 655, 820, 985, 1273
AsuHPI GGTGA 2 cut(s) 26, 608
AvaI CYCGRG 1 cut(s) 569
AvaII GGWCC 5 cut(s) 298, 418, 655, 820, 1273
AxyI CCTNAGG 1 cut(s) 1171
BanII GRGCYC 1 cut(s) 1229
BarI GAAGNNNNNNTAC 2 cut(s) 205, 237
BbsI GAAGAC 1 cut(s) 969
BccI CCATC 3 cut(s) 289, 320, 1058
BciT130I CCWGG 2 cut(s) 416, 653
BclI TGATCA 1 cut(s) 922
BfaI CTAG 4 cut(s) 594, 1127, 1334, 1404
BfoI RGCGCY 1 cut(s) 176
BlpI GCTNAGC 1 cut(s) 392
Bme1390I CCNGG 2 cut(s) 416, 653
Bme18I GGWCC 5 cut(s) 298, 418, 655, 820, 1273
BmeT110I CYCGRG 1 cut(s) 569
BmgT120I GGNCC 6 cut(s) 298, 418, 655, 820, 985, 1273
BmiI GGNNCC 1 cut(s) 1479
BmrFI CCNGG 2 cut(s) 416, 653
BmrI ACTGGG 1 cut(s) 855
BmsI GCATC 4 cut(s) 83, 515, 1137, 1420
BmuI ACTGGG 1 cut(s) 855
BoxI GACNNNNGTC 1 cut(s) 1444
BpiI GAAGAC 1 cut(s) 969
Bpu10I CCTNAGC 1 cut(s) 422
Bpu1102I GCTNAGC 1 cut(s) 392
BpuEI CTTGAG 1 cut(s) 1081
BsaAI YACGTR 2 cut(s) 81, 312
BsaJI CCNNGG 1 cut(s) 1005
BsaWI WCCGGW 2 cut(s) 278, 303
Bsc4I CCNNNNNNNGG 2 cut(s) 131, 536
Bse118I RCCGGY 1 cut(s) 278
Bse1I ACTGG 1 cut(s) 861
Bse21I CCTNAGG 1 cut(s) 1171
Bse3DI GCAATG 1 cut(s) 758
BseAI TCCGGA 1 cut(s) 303
BseBI CCWGG 2 cut(s) 416, 653
BseDI CCNNGG 1 cut(s) 1005
BseGI GGATG 1 cut(s) 1256
BseLI CCNNNNNNNGG 2 cut(s) 131, 536
BseMI GCAATG 1 cut(s) 758
BseNI ACTGG 1 cut(s) 861
BshFI GGCC 1 cut(s) 987
BshTI ACCGGT 1 cut(s) 278
BsiHKCI CYCGRG 1 cut(s) 569
BsiSI CCGG 2 cut(s) 279, 304
BslFI GGGAC 1 cut(s) 1432
BslI CCNNNNNNNGG 2 cut(s) 131, 536
BsmFI GGGAC 1 cut(s) 1432
BsmI GAATGC 2 cut(s) 450, 747
BsnI GGCC 1 cut(s) 987
BsoBI CYCGRG 1 cut(s) 569
Bsp1286I GDGCHC 1 cut(s) 1229
Bsp13I TCCGGA 1 cut(s) 303
Bsp1407I TGTACA 1 cut(s) 1209
Bsp143I GATC 6 cut(s) 99, 202, 565, 898, 922, 1506
Bsp1720I GCTNAGC 1 cut(s) 392
BspANI GGCC 1 cut(s) 987
BspEI TCCGGA 1 cut(s) 303
BspHI TCATGA 1 cut(s) 235
BspLI GGNNCC 1 cut(s) 1479
BspPI GGATC 2 cut(s) 197, 1501
BsrDI GCAATG 1 cut(s) 758
BsrFI RCCGGY 1 cut(s) 278
BsrGI TGTACA 1 cut(s) 1209
BsrI ACTGG 1 cut(s) 861
BssAI RCCGGY 1 cut(s) 278
BssECI CCNNGG 1 cut(s) 1005
BssMI GATC 6 cut(s) 99, 202, 565, 898, 922, 1506
BssT1I CCWWGG 1 cut(s) 1005
Bst2UI CCWGG 2 cut(s) 416, 653
Bst4CI ACNGT 1 cut(s) 139
Bst6I CTCTTC 3 cut(s) 628, 1071, 1082
BstAUI TGTACA 1 cut(s) 1209
BstBAI YACGTR 2 cut(s) 81, 312
BstC8I GCNNGC 3 cut(s) 171, 1028, 1164
BstDEI CTNAG 3 cut(s) 392, 422, 1171
BstEII GGTNACC 1 cut(s) 539
BstF5I GGATG 1 cut(s) 1256
BstH2I RGCGCY 1 cut(s) 176
BstHHI GCGC 1 cut(s) 175
BstKTI GATC 6 cut(s) 102, 205, 568, 901, 925, 1509
BstMBI GATC 6 cut(s) 99, 202, 565, 898, 922, 1506
BstNI CCWGG 2 cut(s) 416, 653
BstNSI RCATGY 1 cut(s) 700
BstPAI GACNNNNGTC 1 cut(s) 1444
BstPI GGTNACC 1 cut(s) 539
BstSCI CCNGG 2 cut(s) 414, 651
BstSNI TACGTA 1 cut(s) 81
BstV2I GAAGAC 1 cut(s) 969
Bsu36I CCTNAGG 1 cut(s) 1171
BsuRI GGCC 1 cut(s) 987
BtsCI GGATG 1 cut(s) 1256
BtsI GCAGTG 1 cut(s) 136
BtsIMutI CAGTG 2 cut(s) 135, 136
Cac8I GCNNGC 3 cut(s) 171, 1028, 1164
CciI TCATGA 1 cut(s) 235
CfoI GCGC 1 cut(s) 175
Cfr10I RCCGGY 1 cut(s) 278
Cfr13I GGNCC 6 cut(s) 298, 418, 655, 820, 985, 1273
Csp6I GTAC 1 cut(s) 1210
CspAI ACCGGT 1 cut(s) 278
CspCI CAANNNNNGTGG 2 cut(s) 741, 776
CviQI GTAC 1 cut(s) 1210
DdeI CTNAG 3 cut(s) 392, 422, 1171
DpnI GATC 6 cut(s) 101, 204, 567, 900, 924, 1508
DpnII GATC 6 cut(s) 99, 202, 565, 898, 922, 1506
DraI TTTAAA 2 cut(s) 187, 408
Eam1104I CTCTTC 3 cut(s) 628, 1071, 1082
EarI CTCTTC 3 cut(s) 628, 1071, 1082
Eco105I TACGTA 1 cut(s) 81
Eco130I CCWWGG 1 cut(s) 1005
Eco24I GRGCYC 1 cut(s) 1229
Eco47I GGWCC 5 cut(s) 298, 418, 655, 820, 1273
Eco47III AGCGCT 1 cut(s) 174
Eco81I CCTNAGG 1 cut(s) 1171
Eco88I CYCGRG 1 cut(s) 569
Eco91I GGTNACC 1 cut(s) 539
EcoO65I GGTNACC 1 cut(s) 539
EcoRII CCWGG 2 cut(s) 414, 651
EcoT14I CCWWGG 1 cut(s) 1005
EcoT22I ATGCAT 1 cut(s) 155
EcoT38I GRGCYC 1 cut(s) 1229
ErhI CCWWGG 1 cut(s) 1005
FalI AAGNNNNNCTT 2 cut(s) 347, 379
FaqI GGGAC 1 cut(s) 1432
FauNDI CATATG 1 cut(s) 685
FbaI TGATCA 1 cut(s) 922
FokI GGATG 1 cut(s) 1243
FriOI GRGCYC 1 cut(s) 1229
FspBI CTAG 4 cut(s) 594, 1127, 1334, 1404
GlaI GCGC 1 cut(s) 174
HaeII RGCGCY 1 cut(s) 176
HaeIII GGCC 1 cut(s) 987
HapII CCGG 2 cut(s) 279, 304
HhaI GCGC 1 cut(s) 175
Hin6I GCGC 1 cut(s) 173
HinP1I GCGC 1 cut(s) 173
HindIII AAGCTT 1 cut(s) 22
HinfI GANTC 4 cut(s) 341, 523, 672, 1121
HpaII CCGG 2 cut(s) 279, 304
HphI GGTGA 2 cut(s) 26, 608
Hpy188I TCNGA 5 cut(s) 119, 126, 456, 933, 1282
Hpy188III TCNNGA 7 cut(s) 236, 304, 563, 594, 906, 959, 968
HpyAV CCTTC 7 cut(s) 216, 248, 540, 668, 714, 788, 1361
HpyCH4III ACNGT 1 cut(s) 139
HpyCH4IV ACGT 3 cut(s) 80, 311, 589
HpyF3I CTNAG 3 cut(s) 392, 422, 1171
HpySE526I ACGT 3 cut(s) 80, 311, 589
HspAI GCGC 1 cut(s) 173
Kpn2I TCCGGA 1 cut(s) 303
Ksp22I TGATCA 1 cut(s) 922
Kzo9I GATC 6 cut(s) 99, 202, 565, 898, 922, 1506
LmnI GCTCC 2 cut(s) 469, 1497
LweI GCATC 4 cut(s) 83, 515, 1137, 1420
MaeI CTAG 4 cut(s) 594, 1127, 1334, 1404
MaeII ACGT 3 cut(s) 80, 311, 589
MaeIII GTNAC 4 cut(s) 539, 717, 889, 1122
MalI GATC 6 cut(s) 101, 204, 567, 900, 924, 1508
MboI GATC 6 cut(s) 99, 202, 565, 898, 922, 1506
MboII GAAGA 7 cut(s) 173, 213, 615, 720, 969, 1088, 1099
MfeI CAATTG 2 cut(s) 1471, 1500
MhlI GDGCHC 1 cut(s) 1229
MlyI GAGTC 3 cut(s) 350, 681, 1130
Mph1103I ATGCAT 1 cut(s) 155
MroI TCCGGA 1 cut(s) 303
MroXI GAANNNNTTC 4 cut(s) 747, 1091, 1298, 1371
MslI CAYNNNNRTG 2 cut(s) 455, 1502
MspI CCGG 2 cut(s) 279, 304
MspR9I CCNGG 2 cut(s) 416, 653
MunI CAATTG 2 cut(s) 1471, 1500
Mva1269I GAATGC 2 cut(s) 450, 747
MvaI CCWGG 2 cut(s) 416, 653
NdeI CATATG 1 cut(s) 685
NdeII GATC 6 cut(s) 99, 202, 565, 898, 922, 1506
NlaIV GGNNCC 1 cut(s) 1479
NmuCI GTSAC 1 cut(s) 1122
NsiI ATGCAT 1 cut(s) 155
NspI RCATGY 1 cut(s) 700
OliI CACNNNNGTG 1 cut(s) 1502
PagI TCATGA 1 cut(s) 235
PctI GAATGC 2 cut(s) 450, 747
PdmI GAANNNNTTC 4 cut(s) 747, 1091, 1298, 1371
PfeI GAWTC 1 cut(s) 523
PinAI ACCGGT 1 cut(s) 278
PleI GAGTC 3 cut(s) 349, 680, 1129
PpsI GAGTC 3 cut(s) 349, 680, 1129
Ppu21I YACGTR 2 cut(s) 81, 312
PshAI GACNNNNGTC 1 cut(s) 1444
PshBI ATTAAT 1 cut(s) 1329
PsiI TTATAA 1 cut(s) 1356
Psp6I CCWGG 2 cut(s) 414, 651
PspEI GGTNACC 1 cut(s) 539
PspGI CCWGG 2 cut(s) 414, 651
PspN4I GGNNCC 1 cut(s) 1479
PspPI GGNCC 6 cut(s) 298, 418, 655, 820, 985, 1273
RsaI GTAC 1 cut(s) 1211
RsaNI GTAC 1 cut(s) 1210
RseI CAYNNNNRTG 2 cut(s) 455, 1502
Sau3AI GATC 6 cut(s) 99, 202, 565, 898, 922, 1506
Sau96I GGNCC 6 cut(s) 298, 418, 655, 820, 985, 1273
SchI GAGTC 3 cut(s) 350, 681, 1130
ScrFI CCNGG 2 cut(s) 416, 653
SduI GDGCHC 1 cut(s) 1229
SfaNI GCATC 4 cut(s) 83, 515, 1137, 1420
SinI GGWCC 5 cut(s) 298, 418, 655, 820, 1273
SmiMI CAYNNNNRTG 2 cut(s) 455, 1502
SmlI CTYRAG 1 cut(s) 1096
SmoI CTYRAG 1 cut(s) 1096
SnaBI TACGTA 1 cut(s) 81
SspI AATATT 2 cut(s) 43, 844
SspMI CTAG 4 cut(s) 594, 1127, 1334, 1404
StyD4I CCNGG 2 cut(s) 414, 651
StyI CCWWGG 1 cut(s) 1005
TaaI ACNGT 1 cut(s) 139
TaiI ACGT 3 cut(s) 83, 314, 592
TaqI TCGA 2 cut(s) 833, 1145
TaqII GACCGA 1 cut(s) 983
TatI WGTACW 1 cut(s) 1209
TfiI GAWTC 1 cut(s) 523
TscAI CASTG 2 cut(s) 136, 142
TseFI GTSAC 1 cut(s) 1122
Tsp45I GTSAC 1 cut(s) 1122
TspDTI ATGAA 9 cut(s) 252, 366, 428, 696, 843, 1291, 1307, 1350, 1381
TspRI CASTG 2 cut(s) 136, 142
VpaK11BI GGWCC 5 cut(s) 298, 418, 655, 820, 1273
VspI ATTAAT 1 cut(s) 1329
XapI RAATTY 3 cut(s) 938, 999, 1237
XbaI TCTAGA 1 cut(s) 593
XceI RCATGY 1 cut(s) 700
XmnI GAANNNNTTC 4 cut(s) 747, 1091, 1298, 1371
XspI CTAG 4 cut(s) 594, 1127, 1334, 1404
Zsp2I ATGCAT 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.