RchiOBHm_Chr6g0275331

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
37083996 .. 37086998
3003 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24702

Sequence Viewer

Length: 3003 bp
ATGGATATCTATATTCCTCGCCTCATTCTCTACTTGCTGCTTCAGGTGTTTTTGGCGTCTTTATGCCTAAACACTAGCAGTATTGTGAAATCATGCATGGAGGAAGAGAGACAAGCTCTTCTCAACTTTAAACAAGATCTCATTGATCCATCTGGTAGGATTTCTTCTTGGGTGGGTCATCAATGTTGTGGATGGAGAGGTATTTCATGCAACAACCACACAGGTCATGTTGTAATCATTGACCTCCGTAATCCATATCCACGTCCATACCGAAACTTCACTGAGTATGAAGAATCTTGTTTGGGAGGTAAGTTAAATCCTTATTTGCTTGGCTTGAAACATTTGAGTTACTTAGACCTGAGCTTGAATGATTTTCAAGGGCTTCCGATTCCTAACTTTATTGGCCAGCTTACAAGTTTGAGCTATCTCAATCTTTCAAGTCTCAGTAGATCTGCTACATTTGTAGCCGAGATTCCCCCATCACTTGGTAACCTCTCGAACTTGAACTCTCTTGACCTCCAGCATAATCTACTTTCTTCCAAAAACTTGGATTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTGGAGGTGTGAACCTTAGTAGCACAAGAGTAAGTTGGCTACATGCTGCTAATATGCTTCCTTCACTCTCAGAGTTGCATTTGTCTGGTTGCCAAATTGGTGGAAACCAGCTTCCACTGTCCATGCCTACAATTAACTTCACATCACTTTTGGTCCTTGATATGTCATGGAATAATCTTATCAATTCTTCATTTCCTAAATGGATTTTCAATCTTTCTAGCCTTACAAAACTTGATCTAACAGGGAATCCTTTGCTCCGATCCACTCTTAATGAACTTCCAAGCCTCAAATCTCTAGAATACCTTCATTTATCTAGTGCAGGACTTAATGGTCAAGTTCCCAAATTCATTGGAAATTTGTGCAAGCTCAAGTCATTAGGTCTTGCGAGCAACAAATTTGATGGGGGGATTCAAGAGTTTCTGAGTGGGTTTTCAAATTGTTCATTTAATAGAATGGAGTCTCTAGATTTGTCTTACTGTGGGCTGGTAGGCAAATTGCCTACTTCATTGGGAATGCTGAAACGCCTACAGCATTTGAATCTTGGCTCCAACTCCTTTTGGGGCTCCCTTCCCGCAACTATTATCAGCAATTTATCATCATCCCTGAAGGCACTTGATCTCAGTTCTAATCTTTTCAACGGTTCCATTCCTCAAAATTTAGGACAACTCTGTCAGCTAGTTACCCTTGATCTCAGTTCTAATCTTTTCAAAAGTTACAATATTCCTCAAAGTTTGGGACAACTCTCTCAACTAGTTCATCTAGATTTATCTGAAAACTCATGGGGAGGCACTATAACGGAAGCACATTTCATAAATCTCACCAGATTAGAGTTGTTTTCAATAAGCACAGACCGACGTGTGCCCATCATTTTCAATTTGACTGATTATGATTGGATTCCTCCTTTCAAGCTCCGTGCAGTTTACATGGACAATTGTCGAGTAGGCCCTGGCTTTCCCATTTGGCTTCAATCTCAAACTGAACTGTTAGATGTCAAACTTAGTAATGCTGGAATCTCGGGTGCAATACCAGAGGAATGGGTCTTTAAGATATCTTCCCAAATCAAAACTTTGAATTTATCTTACAATCAAATAAGCGGAAGGCTTCCGTTCCGATTTAACTTTTCATATCTATATATTATAGATTTAAGCCATAATCAATTTGATGGCCCACTCCAACTTTCGTCCACTAATACTCCAATTTTAACATTTTTATCTCTTTCTTATAATTACTTGAATGGTACAATTCCATCATCTATTTGCAACATTCAATCGTTGTGTACTCTATGTCTGAGAAACAATCAGCTATCCGGAAAGTTCCCTCAAGAATGGAGTTTGTGGAGAGACATAGGAAGTCTAGATGTCTCAAACAACAATCTATCTGGTAATATTCCAACCTCAATGGGTATTCCAAGAAGTATTGAAATATTAAAGATGGGCAACAACTACTTTACTGGAGAAATTCCTTCTTCCTTGCAAAATTGCTCTGATTTAGACAGACTTTATCTTGGAGGCAACAAGTTTACTGGAAGCCTACCTTTCTGGCTAGGATCAAAAGTATTGAAATTGAAAGTGCTACAACTGCGATCCAACTTTCTAAGTGGAAATGTACCTGAACAATTGTGCAATCTTTCATACCTTACGATCCTAGACCTGAGTAACAACAACCTATCAGGGGCTATACCAAAGTGTTTGATTAATTTGACTTCTCTAGTTCATGATTTAAAGAAAGGTTGGCATAGCCCTGAGCCAAATGGTGACCCAACAACTTTGACTATGAAAGCAAGACAAAGCGAATACAGCATCTCAAATGCAGTTTTTGTAACCATCATTGATCTTTCGTCAAATGATTTAGAAGGTGAAATTCCTGAAGAACTCTGTAGCCTTGTTCAATTGGGTACCTTGAACTTGTCCATGAATCAATTAAGTGGAAATATCCCCTCGAAGATTGGAAACTTGCTCTTACTTGAAACTCTCGATCTCTCCCAGAACCAGCTTTCAGGACACATTCCACAAAGTCTCTCTTCCCTGACCTTCTTGTCTCACCTGAACTTATCTTTTAACAACTTGACAGGAAGAATTCCTTCAGGCAACCAACTTCAGACGCTAGATGATTCATCTATTTATGAGGGCAATCCTTCACTATGTGGATTTCCTCTTTCAAAATGCCCAGAAGATAGAGACAACGTGCCAGAGTCTCTTGCAGAAGAAAATAAAGATCATGGAGATGATGACGAAAACCTTGGTTTCTATACCAGCACAGTGCTTGGCTTTATCATAGGCTTTTGGAGTATCTGCGGTACATTGATATTGAAGAAGTCATGGAGGTATGCCTATTTTCAATTTTTTGACAACATTAAAGAGAAAGTAGCACTATCAATTGCATTGAAAGTAGCTCATATACAAGGAAGAAGGTGA

Protein Analysis

1000

Amino Acids

110.9

Weight (kDa)

6.19

Isoelectric Point (pI)

40.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 71 5.1e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 111 - 305 2.6e-10 Leucine-rich repeat region
LRR_14 PF23598 351 - 520 6.7e-11 Leucine-rich repeat region
LRR_14 PF23598 795 - 903 3.2e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1812
AasI GACNNNNNNGTC 3 cut(s) 918, 1257, 2623
Acc65I GGTACC 1 cut(s) 2483
AccB1I GGYRCC 1 cut(s) 2483
AccB7I CCANNNNNTGG 1 cut(s) 485
AccIII TCCGGA 1 cut(s) 1895
AciI CCGC 3 cut(s) 1161, 1683, 2883
AclWI GGATC 5 cut(s) 140, 843, 2143, 2166, 2224
AcoI YGGCCR 1 cut(s) 403
AcsI RAATTY 8 cut(s) 932, 943, 983, 1243, 1660, 2046, 2448, 2664
AcuI CTGAAG 5 cut(s) 26, 1214, 2475, 2655, 2669
AcyI GRCGYC 1 cut(s) 56
AdeI CACNNNGTG 1 cut(s) 2732
AfaI GTAC 5 cut(s) 1828, 1867, 2196, 2485, 2887
AfiI CCNNNNNNNGG 2 cut(s) 485, 2260
AflIII ACRYGT 1 cut(s) 1444
AhlI ACTAGT 1 cut(s) 1339
AjiI CACGTC 2 cut(s) 263, 1445
AjnI CCWGG 1 cut(s) 1534
Alw26I GTCTC 9 cut(s) 103, 446, 1053, 1923, 1954, 2609, 2631, 2760, 2787
AlwI GGATC 5 cut(s) 140, 843, 2143, 2166, 2224
Ama87I CYCGRG 1 cut(s) 1603
Aor13HI TCCGGA 1 cut(s) 1895
AoxI GGCC 3 cut(s) 403, 1531, 1753
ApeKI GCWGC 2 cut(s) 37, 635
ApoI RAATTY 8 cut(s) 932, 943, 983, 1243, 1660, 2046, 2448, 2664
AseI ATTAAT 1 cut(s) 2283
Asp700I GAANNNNTTC 2 cut(s) 891, 2668
Asp718I GGTACC 1 cut(s) 2483
AspS9I GGNCC 3 cut(s) 742, 1532, 1754
AsuHPI GGTGA 4 cut(s) 1399, 2354, 2456, 2621
AvaI CYCGRG 1 cut(s) 1603
AvaII GGWCC 1 cut(s) 742
BaeGI GKGCMC 1 cut(s) 1452
BalI TGGCCA 1 cut(s) 405
BanI GGYRCC 1 cut(s) 2483
BanII GRGCYC 1 cut(s) 1154
BarI GAAGNNNNNNTAC 2 cut(s) 148, 180
BbvI GCAGC 2 cut(s) 24, 622
BccI CCATC 9 cut(s) 157, 186, 487, 983, 1460, 1745, 1843, 2014, 2420
BciT130I CCWGG 1 cut(s) 1536
BcoDI GTCTC 9 cut(s) 103, 446, 1053, 1923, 1954, 2609, 2631, 2760, 2787
BcuI ACTAGT 1 cut(s) 1339
BfmI CTRYAG 2 cut(s) 1115, 2464
BglII AGATCT 2 cut(s) 136, 449
BisI GCNGC 2 cut(s) 38, 636
BlsI GCNGC 2 cut(s) 39, 637
Bme1390I CCNGG 1 cut(s) 1536
Bme18I GGWCC 1 cut(s) 742
BmeT110I CYCGRG 1 cut(s) 1603
BmgBI CACGTC 2 cut(s) 263, 1445
BmgT120I GGNCC 3 cut(s) 742, 1532, 1754
BmiI GGNNCC 4 cut(s) 1135, 1153, 1231, 2485
BmrFI CCNGG 1 cut(s) 1536
BmsI GCATC 1 cut(s) 2397
BoxI GACNNNNGTC 1 cut(s) 1521
BplI GAGNNNNNCTC 2 cut(s) 100, 132
BpmI CTGGAG 2 cut(s) 503, 2061
Bpu10I CCTNAGC 2 cut(s) 359, 2331
BpuEI CTTGAG 2 cut(s) 941, 1893
BsaHI GRCGYC 1 cut(s) 56
BsaJI CCNNGG 2 cut(s) 1534, 2827
BsaWI WCCGGW 1 cut(s) 1895
BsaXI ACNNNNNCTCC 2 cut(s) 1765, 1795
Bsc4I CCNNNNNNNGG 2 cut(s) 485, 2260
Bse1I ACTGG 2 cut(s) 2044, 2116
BseAI TCCGGA 1 cut(s) 1895
BseBI CCWGG 1 cut(s) 1536
BseDI CCNNGG 2 cut(s) 1534, 2827
BseGI GGATG 2 cut(s) 197, 1187
BseLI CCNNNNNNNGG 2 cut(s) 485, 2260
BseNI ACTGG 2 cut(s) 2044, 2116
BseSI GKGCMC 1 cut(s) 1452
BseXI GCAGC 2 cut(s) 24, 622
BsgI GTGCAG 2 cut(s) 927, 1524
BshFI GGCC 3 cut(s) 405, 1533, 1755
BshNI GGYRCC 1 cut(s) 2483
BsiHKCI CYCGRG 1 cut(s) 1603
BsiSI CCGG 1 cut(s) 1896
BslFI GGGAC 1 cut(s) 1338
BslI CCNNNNNNNGG 2 cut(s) 485, 2260
BsmAI GTCTC 9 cut(s) 103, 446, 1053, 1923, 1954, 2609, 2631, 2760, 2787
BsmFI GGGAC 1 cut(s) 1338
BsmI GAATGC 1 cut(s) 1107
BsnI GGCC 3 cut(s) 405, 1533, 1755
BsoBI CYCGRG 1 cut(s) 1603
Bsp1286I GDGCHC 2 cut(s) 1154, 1452
Bsp13I TCCGGA 1 cut(s) 1895
BspACI CCGC 3 cut(s) 1161, 1683, 2883
BspANI GGCC 3 cut(s) 405, 1533, 1755
BspEI TCCGGA 1 cut(s) 1895
BspHI TCATGA 1 cut(s) 2302
BspLI GGNNCC 4 cut(s) 1135, 1153, 1231, 2485
BspPI GGATC 5 cut(s) 140, 843, 2143, 2166, 2224
BspQI GCTCTTC 1 cut(s) 123
BspT107I GGYRCC 1 cut(s) 2483
BsrI ACTGG 2 cut(s) 2044, 2116
BssECI CCNNGG 2 cut(s) 1534, 2827
BssNI GRCGYC 1 cut(s) 56
BssT1I CCWWGG 1 cut(s) 2827
Bst2UI CCWGG 1 cut(s) 1536
Bst4CI ACNGT 5 cut(s) 708, 1067, 1229, 1572, 2848
Bst6I CTCTTC 4 cut(s) 99, 123, 574, 2614
BstACI GRCGYC 1 cut(s) 56
BstC8I GCNNGC 3 cut(s) 407, 953, 976
BstEII GGTNACC 2 cut(s) 488, 2342
BstF5I GGATG 2 cut(s) 197, 1187
BstMAI GTCTC 9 cut(s) 103, 446, 1053, 1923, 1954, 2609, 2631, 2760, 2787
BstMWI GCNNNNNNNGC 2 cut(s) 2167, 2385
BstNI CCWGG 1 cut(s) 1536
BstNSI RCATGY 1 cut(s) 635
BstPAI GACNNNNGTC 1 cut(s) 1521
BstPI GGTNACC 2 cut(s) 488, 2342
BstSCI CCNGG 1 cut(s) 1534
BstSFI CTRYAG 2 cut(s) 1115, 2464
BstSLI GKGCMC 1 cut(s) 1452
BstV1I GCAGC 2 cut(s) 24, 622
BstX2I RGATCY 2 cut(s) 136, 449
BstXI CCANNNNNNTGG 3 cut(s) 547, 689, 1623
BstYI RGATCY 2 cut(s) 136, 449
BsuRI GGCC 3 cut(s) 405, 1533, 1755
BtrI CACGTC 2 cut(s) 263, 1445
BtsCI GGATG 2 cut(s) 197, 1187
BtsIMutI CAGTG 3 cut(s) 279, 704, 2853
Cac8I GCNNGC 3 cut(s) 407, 953, 976
CciI TCATGA 1 cut(s) 2302
Cfr13I GGNCC 3 cut(s) 742, 1532, 1754
CseI GACGC 2 cut(s) 45, 2698
Csp6I GTAC 5 cut(s) 1827, 1866, 2195, 2484, 2886
CviQI GTAC 5 cut(s) 1827, 1866, 2195, 2484, 2886
DraI TTTAAA 2 cut(s) 130, 2310
DraIII CACNNNGTG 1 cut(s) 2732
DrdI GACNNNNNNGTC 3 cut(s) 918, 1257, 2623
DseDI GACNNNNNNGTC 3 cut(s) 918, 1257, 2623
EaeI YGGCCR 1 cut(s) 403
Eam1104I CTCTTC 4 cut(s) 99, 123, 574, 2614
EarI CTCTTC 4 cut(s) 99, 123, 574, 2614
Eco130I CCWWGG 1 cut(s) 2827
Eco24I GRGCYC 1 cut(s) 1154
Eco32I GATATC 2 cut(s) 7, 1638
Eco47I GGWCC 1 cut(s) 742
Eco57I CTGAAG 5 cut(s) 26, 1214, 2475, 2655, 2669
Eco88I CYCGRG 1 cut(s) 1603
Eco91I GGTNACC 2 cut(s) 488, 2342
EcoO109I RGGNCCY 1 cut(s) 1532
EcoO65I GGTNACC 2 cut(s) 488, 2342
EcoRI GAATTC 1 cut(s) 2664
EcoRII CCWGG 1 cut(s) 1534
EcoRV GATATC 2 cut(s) 7, 1638
EcoT14I CCWWGG 1 cut(s) 2827
EcoT22I ATGCAT 1 cut(s) 98
EcoT38I GRGCYC 1 cut(s) 1154
ErhI CCWWGG 1 cut(s) 2827
FalI AAGNNNNNCTT 6 cut(s) 2107, 2139, 2593, 2625, 2653, 2685
FaqI GGGAC 1 cut(s) 1338
FauI CCCGC 1 cut(s) 1168
Fnu4HI GCNGC 2 cut(s) 38, 636
FokI GGATG 2 cut(s) 204, 1174
FriOI GRGCYC 1 cut(s) 1154
Fsp4HI GCNGC 2 cut(s) 38, 636
GluI GCNGC 2 cut(s) 38, 636
GsuI CTGGAG 2 cut(s) 503, 2061
HaeIII GGCC 3 cut(s) 405, 1533, 1755
HapII CCGG 1 cut(s) 1896
HgaI GACGC 2 cut(s) 45, 2698
Hin1I GRCGYC 1 cut(s) 56
HpaII CCGG 1 cut(s) 1896
HphI GGTGA 4 cut(s) 1399, 2354, 2456, 2621
Hpy166II GTNNAC 5 cut(s) 601, 1510, 1773, 1866, 2109
Hpy188I TCNGA 9 cut(s) 387, 661, 848, 1011, 1360, 1700, 1878, 2074, 2688
Hpy8I GTNNAC 5 cut(s) 601, 1510, 1773, 1866, 2109
Hpy99I CGWCG 1 cut(s) 1446
HpyCH4III ACNGT 5 cut(s) 708, 1067, 1229, 1572, 2848
HpyCH4IV ACGT 3 cut(s) 262, 1444, 2772
HpyF10VI GCNNNNNNNGC 2 cut(s) 2167, 2385
HpySE526I ACGT 3 cut(s) 262, 1444, 2772
Hsp92I GRCGYC 1 cut(s) 56
Kpn2I TCCGGA 1 cut(s) 1895
KpnI GGTACC 1 cut(s) 2487
LguI GCTCTTC 1 cut(s) 123
LmnI GCTCC 4 cut(s) 849, 1139, 1157, 1503
Lsp1109I GCAGC 2 cut(s) 24, 622
LweI GCATC 1 cut(s) 2397
MaeII ACGT 3 cut(s) 262, 1444, 2772
MaeIII GTNAC 7 cut(s) 347, 488, 1267, 1301, 2243, 2342, 2407
MfeI CAATTG 4 cut(s) 1519, 2204, 2477, 2964
MflI RGATCY 2 cut(s) 136, 449
MhlI GDGCHC 2 cut(s) 1154, 1452
MlsI TGGCCA 1 cut(s) 405
MluNI TGGCCA 1 cut(s) 405
MlyI GAGTC 2 cut(s) 1055, 2789
MmeI TCCRAC 4 cut(s) 1161, 1786, 2003, 2199
Mox20I TGGCCA 1 cut(s) 405
Mph1103I ATGCAT 1 cut(s) 98
MroI TCCGGA 1 cut(s) 1895
MroXI GAANNNNTTC 2 cut(s) 891, 2668
MscI TGGCCA 1 cut(s) 405
MslI CAYNNNNRTG 1 cut(s) 2811
Msp20I TGGCCA 1 cut(s) 405
MspI CCGG 1 cut(s) 1896
MspR9I CCNGG 1 cut(s) 1536
MunI CAATTG 4 cut(s) 1519, 2204, 2477, 2964
Mva1269I GAATGC 1 cut(s) 1107
MvaI CCWGG 1 cut(s) 1536
MwoI GCNNNNNNNGC 2 cut(s) 2167, 2385
NlaIV GGNNCC 4 cut(s) 1135, 1153, 1231, 2485
NmeAIII GCCGAG 1 cut(s) 493
NmuCI GTSAC 1 cut(s) 2342
NsiI ATGCAT 1 cut(s) 98
NspI RCATGY 1 cut(s) 635
PagI TCATGA 1 cut(s) 2302
PciSI GCTCTTC 1 cut(s) 123
PcsI WCGNNNNNNNCGW 1 cut(s) 268
PctI GAATGC 1 cut(s) 1107
PdmI GAANNNNTTC 2 cut(s) 891, 2668
PflMI CCANNNNNTGG 1 cut(s) 485
PkrI GCNGC 2 cut(s) 39, 637
PleI GAGTC 2 cut(s) 1054, 2788
PpsI GAGTC 2 cut(s) 1054, 2788
PshAI GACNNNNGTC 1 cut(s) 1521
PshBI ATTAAT 1 cut(s) 2283
PsiI TTATAA 1 cut(s) 1812
Psp6I CCWGG 1 cut(s) 1534
PspEI GGTNACC 2 cut(s) 488, 2342
PspGI CCWGG 1 cut(s) 1534
PspN4I GGNNCC 4 cut(s) 1135, 1153, 1231, 2485
PspPI GGNCC 3 cut(s) 742, 1532, 1754
PsuI RGATCY 2 cut(s) 136, 449
RsaI GTAC 5 cut(s) 1828, 1867, 2196, 2485, 2887
RsaNI GTAC 5 cut(s) 1827, 1866, 2195, 2484, 2886
RseI CAYNNNNRTG 1 cut(s) 2811
SapI GCTCTTC 1 cut(s) 123
SatI GCNGC 2 cut(s) 38, 636
Sau96I GGNCC 3 cut(s) 742, 1532, 1754
SchI GAGTC 2 cut(s) 1055, 2789
ScrFI CCNGG 1 cut(s) 1536
SduI GDGCHC 2 cut(s) 1154, 1452
SfaNI GCATC 1 cut(s) 2397
SfcI CTRYAG 2 cut(s) 1115, 2464
SinI GGWCC 1 cut(s) 742
SmiMI CAYNNNNRTG 1 cut(s) 2811
SmlI CTYRAG 2 cut(s) 956, 1908
SmoI CTYRAG 2 cut(s) 956, 1908
SpeI ACTAGT 1 cut(s) 1339
SsiI CCGC 3 cut(s) 1161, 1683, 2883
SspI AATATT 3 cut(s) 1309, 1975, 2013
StyD4I CCNGG 1 cut(s) 1534
StyI CCWWGG 1 cut(s) 2827
TaaI ACNGT 5 cut(s) 708, 1067, 1229, 1572, 2848
TaiI ACGT 3 cut(s) 265, 1447, 2775
TaqI TCGA 4 cut(s) 497, 1525, 2528, 2562
TaqII GACCGA 1 cut(s) 1455
TatI WGTACW 1 cut(s) 1865
TscAI CASTG 3 cut(s) 286, 711, 2853
TseFI GTSAC 1 cut(s) 2342
TseI GCWGC 2 cut(s) 37, 635
Tsp45I GTSAC 1 cut(s) 2342
TspGWI ACGGA 4 cut(s) 236, 1400, 1490, 1683
TspRI CASTG 3 cut(s) 286, 711, 2853
Van91I CCANNNNNTGG 1 cut(s) 485
VpaK11BI GGWCC 1 cut(s) 742
VspI ATTAAT 1 cut(s) 2283
XapI RAATTY 8 cut(s) 932, 943, 983, 1243, 1660, 2046, 2448, 2664
XbaI TCTAGA 4 cut(s) 883, 1051, 1348, 1942
XceI RCATGY 1 cut(s) 635
XmnI GAANNNNTTC 2 cut(s) 891, 2668
Zsp2I ATGCAT 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.