Rw5G014500

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
17446841 .. 17450026
3186 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G014500.1

Sequence Viewer

Length: 3186 bp
ATGGATAGCTCCTGTGCAAATCTATTCAAGCCTACCAGCTATCGCTTCCTCATCAACGATGTTGCTCGCTACTTGCTCTTTCTTTTTCTGGCATCTTCATATCTGCAGTCTACTATACTGTGTTTGGGAGATGGACTTCCGAGTGGTGTGAGATCATCATCATGCATCGAGGAAGAGAGACGAGCGCTTCTCGCCTTCAAAGGAGATGTTACTGATCATTCCGGTAGGCTTTCTTCTTGGGTGGGTCAGGATTGCTGCCGATGGAAAGGGATTTCATGCAAGAACCATACAGGTGGCGTTGCGAAGTTGGACCTCCGAAACCTGAATTATGATCAAGGCTTCTACGGGGAGACTTCATTGGGGGGTAAGATTAATCCTTCTTTGCTCAGCTTGAAGAACTTATATTACCTTGACCTAAGCGGAAATGATTTTCACGGACTTCGAATTCTTAATTTCTTTGGAAAGCTTACAAGCTTGAGGTATCTTAATCTCTCCTATAATTTATTTGTGGGAGAGATTCCCCCATCTCTTGGTAACCTCTCAAACTTGAATTATCTTGACCTAAGTGGAAATGATTTTCAAGGACTTCAAATTCCTAACTTCTTTGGGAAGCTTCAAAGTTTGAGGTATCTCAATCTCTCATATAATTCATTTGTGGGAGAGATTCCCCCAGCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCAGTTCTGATTATTACAGTTATGTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAGTATCTCAATCTTGGAGGTGTGAACCTTAGCAGCACAGGAGTAAGTTGGCTACATGATGTCAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTGATTGCCAAATTCAAAACCTTCCACACTCCCACCTGCCGTCCGTGAACTTCACTTCCCGCCTATTGGCTCTTGATATATCAAACAATTATATTTATTCTTCATTTCCCAGCTGGTTTTTTAATCTTACCAACCTCAAAAGACTTGATGCATCTAGCAATCTGTTCGGGCCCTTGCCTGTTGAAATTGCAAACCTCAAGTCTTTGGAAGACCTTGATTTCAGTTATAATCAGCTCCAAGGTCAAATTCCCAAAGTCTTTGGTACTTTGTGCAGCCTAAGGATATTAGATCTTTCGAAGAACTCGTTCAATGGTAGTTTGGAAGAGGTTTTGAATGGTTTCTCAAACTGTACAAGTCGTAGATTAGAGTCACTTGCTTTGTCCCACAATATGGTTGAAGGTGAACTGCCTGCCGCCTTAGGAATGCTATATCTGAAGGAACTTGACCTCAGTTCAAACCAATTTTCTGGTTCAATTTCACATTCTATCGGTAATTTATCATCCCTGAAAACACTGGACATCTCTGGTAATAATTTGAATGAGTCCATTCCTGAAAGTTTGGGACAACTCTCTCAGCTAGTTCACCTGGATCTATCTTGGAATTCGTGGGAAGGCATTCTAACCGAAGCCCATTTCCGAACTCTCACAAAGTTGAAGTCTTTTGCAGTCGGTAGCACACACGGGCCTAGGTCCCTCATTTTTAACATGGCTCATGACTGGGTTCCTCCCTTCCAGCTTGATTCACTCGACATTACCAACTGCAGAGTAGGTCCTGCCTTTGGGGTATGGCTTCAGTCTCAAACTGAATTAAAGCGTCTCAGGCTTAGTAATACTTCAATCTCAGATTTCATACCAGAGGAATGGTTCTTGAAGATATCTTTCCAGCTCACATCATTGGATTTATCTTATAACCAAGTCCGTGGAAAGCTTCCATTGCACATGAACTCCCCATCTTTAGAGTATATAGATTTGGGTCATAATCGATTTGACGGCCCTCTGCCACATTGGTCTAGTGATGCTGCCGCCTATCTCGATCTTCAAAGCAATTTATTTTCCGGGCCCATTCCCTCAAATTGTGATCAATTGTTGCCTAGCTTGAGTGAATTGTATCTATCTGACAATCATCTAAATGGTAGTATACCACCCTGTATGGGCAACATGTCAAGTTTGTTAATTCTCATGTTAAGAAGCAATCACTTGTCTGGAGAATTCCCTCAAGCATGGAGTCTGTGGCCAGATATAATGGTTGTAGATGTCTCGGACAACAATTTGTCTGGAAATTTCACCATTTCCATGAGTGTTCCCAGCTCACTACAAGTATTGAGTCTGAGCAACAACAGTTTCGGGGGCCAAATTCCTTCTTCTCTATTCCAAAACTGCACAGAGTTGCGGAGTATTAATCTTGGAGGCAATAGGTTTACTGGAAGCATACCTTTACAGACAGGATCAATTGTATCATCCGGATTGTATATGCTAAGATTGCGATCCAACTCTTTAAGCGGACGTATCCCCCATCAACTGTGCTCTCTTCCATCTCTTCATATCATAGACCTTCGCGGCAACAACTTTTCAGGGACCATTCCCAAGTGTTTGTATAATTTGACTGGTTATTACGATATGCCAGACATTGGTGTCCTCGGTTTGTCTAGTTATGCTGAGGAAACCACCTTGACATTGAAGGGACAAGAACTCGAATATGACACCACTCTGGATTTGGTAAATCTCATTGATTTCTCATCAAATAACTTAGAAGGAGTAATCCCTGAAGAAATAAGCAGCCTCATTGCCTTGGGGACGCTGAACTTGTCCAGAAATCAACTCACTGGAAACATTCCCTCAAAGATTGGAAACTTGCGGTGGCTGGAAACTCTTGATCTCTCACACAATCACCTCTCTGGGCAGATTCCTCAAAGTTTCTCTTCTCTAACCTCTCTGTCTCACTTGAACTTGTCTTTCAACAACTTGTCCGGAAGAATTCCTTCAGGCAACCAACTTCAAACACTTGATGATTCATCCATTTACAAGGGCAACCCATCCTTGTGTGGCGTTCCTCTTTCAACTGTCTGCCCGGGAGATGGCGCAGCTGACCCTGACGATGGTGATCATATTGATGATGATATTGATGAGAATGGGAAGTTTGGTATCGTTGTTAGCGCTGTCCTCGGCTTCATCATAGGCTTCTGGAGTGTCTGTGGCACATTGGTTATAAAGAAATCGTGGAGGTATGCCTATTTTCGATTCTTTGATAACATAAAGGAGAAGGCAGCCTTAGCAATTGCATTGAGAGTGGCTCCTTGGCAAAGGAAGACTTGA

Protein Analysis

1061

Amino Acids

117.16

Weight (kDa)

5.48

Isoelectric Point (pI)

40.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 57 - 93 1.3e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 123 - 264 9.6e-16 Leucine-rich repeat region
LRR_8 PF13855 133 - 193 1.2e-08 Leucine rich repeat
LRR_4 PF12799 157 - 196 4.2e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 251 - 426 5.9e-10 Leucine-rich repeat region
LRR_14 PF23598 413 - 566 6.1e-10 Leucine-rich repeat region
LRR_8 PF13855 436 - 492 2.7e-08 Leucine rich repeat
LRR_4 PF12799 436 - 475 4.5e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 872 - 964 9.5e-09 Leucine-rich repeat region
LRR_8 PF13855 907 - 946 7.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1101, 1782, 3080
AarI CACCTGC 1 cut(s) 918
AasI GACNNNNNNGTC 1 cut(s) 2504
Acc36I ACCTGC 1 cut(s) 918
AccB7I CCANNNNNTGG 4 cut(s) 530, 677, 1264, 2501
AccI GTMKAC 2 cut(s) 110, 2011
AccII CGCG 1 cut(s) 2430
AccIII TCCGGA 2 cut(s) 2333, 2840
AciI CCGC 8 cut(s) 420, 934, 1287, 1896, 2263, 2373, 2430, 2728
AclWI GGATC 3 cut(s) 1470, 2326, 2352
AcoI YGGCCR 1 cut(s) 2105
AcsI RAATTY 9 cut(s) 444, 591, 885, 1119, 1474, 2081, 2152, 2226, 2847
AcuI CTGAAG 4 cut(s) 1328, 1649, 2658, 2838
AfaI GTAC 2 cut(s) 1138, 1225
AfeI AGCGCT 2 cut(s) 186, 3028
AfiI CCNNNNNNNGG 9 cut(s) 530, 677, 940, 1264, 1652, 2024, 2501, 2948, 2969
AflIII ACRYGT 1 cut(s) 2031
AjnI CCWGG 1 cut(s) 1458
AjuI GAANNNNNNNTTGG 2 cut(s) 1104, 1136
AloI GAACNNNNNNTCC 2 cut(s) 914, 946
Alw21I GWGCWC 1 cut(s) 2399
Alw26I GTCTC 6 cut(s) 172, 344, 1674, 1694, 2134, 2814
AlwI GGATC 3 cut(s) 1470, 2326, 2352
Ama87I CYCGRG 1 cut(s) 2941
Aor13HI TCCGGA 2 cut(s) 2333, 2840
Aor51HI AGCGCT 2 cut(s) 186, 3028
AoxI GGCC 6 cut(s) 1043, 1556, 1864, 1931, 2105, 2221
ApaI GGGCCC 2 cut(s) 1047, 1935
ApeKI GCWGC 7 cut(s) 255, 810, 1146, 1892, 2649, 2954, 3137
ApoI RAATTY 9 cut(s) 444, 591, 885, 1119, 1474, 2081, 2152, 2226, 2847
ArsI GACNNNNNNTTYG 4 cut(s) 1058, 1090, 1514, 1546
AseI ATTAAT 2 cut(s) 372, 2271
Asp700I GAANNNNTTC 4 cut(s) 1178, 1211, 1488, 2851
AspA2I CCTAGG 1 cut(s) 1559
AspLEI GCGC 3 cut(s) 187, 2954, 3029
AsuC2I CCSGG 3 cut(s) 1930, 2942, 2943
AsuHPI GGTGA 5 cut(s) 1286, 1448, 2149, 2753, 2984
AsuII TTCGAA 2 cut(s) 442, 1169
AvaI CYCGRG 1 cut(s) 2941
AvaII GGWCC 4 cut(s) 310, 1563, 1643, 2448
AvrII CCTAGG 1 cut(s) 1559
AxyI CCTNAGG 2 cut(s) 1151, 1291
BaeGI GKGCMC 2 cut(s) 1047, 1935
BalI TGGCCA 1 cut(s) 2107
BanII GRGCYC 2 cut(s) 1047, 1935
BarI GAAGNNNNNNTAC 2 cut(s) 217, 249
BbsI GAAGAC 1 cut(s) 1089
Bbv12I GWGCWC 1 cut(s) 2399
BbvCI CCTCAGC 1 cut(s) 2529
BbvI GCAGC 7 cut(s) 242, 822, 1158, 1879, 2661, 2966, 3149
BccI CCATC 9 cut(s) 125, 255, 532, 1831, 2394, 2413, 2914, 2942, 2963
BceAI ACGGC 2 cut(s) 898, 1879
BcgI CGANNNNNNTGC 2 cut(s) 1021, 1055
BciT130I CCWGG 1 cut(s) 1460
BciVI GTATCC 1 cut(s) 2390
BclI TGATCA 4 cut(s) 214, 331, 1951, 2974
BcnI CCSGG 3 cut(s) 1930, 2942, 2943
BcoDI GTCTC 6 cut(s) 172, 344, 1674, 1694, 2134, 2814
BfaI CTAG 6 cut(s) 1029, 1451, 1560, 1884, 1965, 2520
BfmI CTRYAG 2 cut(s) 104, 1633
BfoI RGCGCY 2 cut(s) 188, 3030
BfuAI ACCTGC 1 cut(s) 918
BfuI GTATCC 1 cut(s) 2390
BglII AGATCT 1 cut(s) 1162
BlnI CCTAGG 1 cut(s) 1559
BlpI GCTNAGC 1 cut(s) 386
Bme1390I CCNGG 4 cut(s) 1460, 1930, 2942, 2943
Bme18I GGWCC 4 cut(s) 310, 1563, 1643, 2448
BmeT110I CYCGRG 1 cut(s) 2941
BmiI GGNNCC 7 cut(s) 1045, 1565, 1596, 1933, 2222, 2449, 3165
BmrFI CCNGG 4 cut(s) 1460, 1930, 2942, 2943
BmrI ACTGGG 1 cut(s) 1600
BmsI GCATC 5 cut(s) 101, 174, 1012, 1034, 1879
BmuI ACTGGG 1 cut(s) 1600
BpiI GAAGAC 1 cut(s) 1089
BplI GAGNNNNNCTC 4 cut(s) 174, 206, 3148, 3180
BpmI CTGGAG 2 cut(s) 2097, 3076
Bpu10I CCTNAGC 4 cut(s) 416, 806, 2529, 3142
Bpu1102I GCTNAGC 1 cut(s) 386
Bpu14I TTCGAA 2 cut(s) 442, 1169
BpuEI CTTGAG 4 cut(s) 496, 1055, 1990, 2073
BpuMI CCSGG 3 cut(s) 1930, 2942, 2943
Bsa29I ATCGAT 1 cut(s) 1855
BsaBI GATNNNNATC 3 cut(s) 157, 2356, 2973
BsaJI CCNNGG 8 cut(s) 1111, 1559, 1792, 2509, 2661, 2941, 3034, 3167
BsaWI WCCGGW 3 cut(s) 221, 2333, 2840
BsaXI ACNNNNNCTCC 4 cut(s) 1802, 1832, 3049, 3079
Bsc4I CCNNNNNNNGG 9 cut(s) 530, 677, 940, 1264, 1652, 2024, 2501, 2948, 2969
Bse1I ACTGG 5 cut(s) 1392, 1595, 2299, 2482, 2701
Bse21I CCTNAGG 2 cut(s) 1151, 1291
Bse3DI GCAATG 2 cut(s) 1805, 2655
Bse8I GATNNNNATC 3 cut(s) 157, 2356, 2973
BseAI TCCGGA 2 cut(s) 2333, 2840
BseBI CCWGG 1 cut(s) 1460
BseCI ATCGAT 1 cut(s) 1855
BseDI CCNNGG 8 cut(s) 1111, 1559, 1792, 2509, 2661, 2941, 3034, 3167
BseGI GGATG 4 cut(s) 1373, 2330, 2885, 2906
BseJI GATNNNNATC 3 cut(s) 157, 2356, 2973
BseLI CCNNNNNNNGG 9 cut(s) 530, 677, 940, 1264, 1652, 2024, 2501, 2948, 2969
BseMI GCAATG 2 cut(s) 1805, 2655
BseMII CTCAG 8 cut(s) 400, 724, 1336, 1460, 1705, 1728, 2192, 2520
BseNI ACTGG 5 cut(s) 1392, 1595, 2299, 2482, 2701
BseSI GKGCMC 2 cut(s) 1047, 1935
BseXI GCAGC 7 cut(s) 242, 822, 1158, 1879, 2661, 2966, 3149
BseYI CCCAGC 3 cut(s) 670, 983, 2177
BsgI GTGCAG 2 cut(s) 1165, 2236
Bsh1236I CGCG 1 cut(s) 2430
BshFI GGCC 6 cut(s) 1045, 1558, 1866, 1933, 2107, 2223
BshVI ATCGAT 1 cut(s) 1855
BsiHKAI GWGCWC 1 cut(s) 2399
BsiHKCI CYCGRG 1 cut(s) 2941
BsiSI CCGG 5 cut(s) 222, 1929, 2334, 2841, 2942
BslFI GGGAC 6 cut(s) 1240, 1449, 1549, 2461, 2568, 2680
BslI CCNNNNNNNGG 9 cut(s) 530, 677, 940, 1264, 1652, 2024, 2501, 2948, 2969
BsmAI GTCTC 6 cut(s) 172, 344, 1674, 1694, 2134, 2814
BsmBI CGTCTC 2 cut(s) 172, 1694
BsmFI GGGAC 6 cut(s) 1240, 1449, 1549, 2461, 2568, 2680
BsmI GAATGC 2 cut(s) 1302, 1488
BsnI GGCC 6 cut(s) 1045, 1558, 1866, 1933, 2107, 2223
BsoBI CYCGRG 1 cut(s) 2941
Bsp119I TTCGAA 2 cut(s) 442, 1169
Bsp120I GGGCCC 2 cut(s) 1043, 1931
Bsp1286I GDGCHC 3 cut(s) 1047, 1935, 2399
Bsp13I TCCGGA 2 cut(s) 2333, 2840
Bsp1407I TGTACA 1 cut(s) 1223
Bsp1720I GCTNAGC 1 cut(s) 386
BspACI CCGC 8 cut(s) 420, 934, 1287, 1896, 2263, 2373, 2430, 2728
BspANI GGCC 6 cut(s) 1045, 1558, 1866, 1933, 2107, 2223
BspCNI CTCAG 8 cut(s) 399, 723, 1335, 1459, 1704, 1727, 2193, 2521
BspDI ATCGAT 1 cut(s) 1855
BspEI TCCGGA 2 cut(s) 2333, 2840
BspFNI CGCG 1 cut(s) 2430
BspHI TCATGA 1 cut(s) 1585
BspLI GGNNCC 7 cut(s) 1045, 1565, 1596, 1933, 2222, 2449, 3165
BspMAI CTGCAG 2 cut(s) 108, 1637
BspMI ACCTGC 1 cut(s) 918
BspPI GGATC 3 cut(s) 1470, 2326, 2352
BspT104I TTCGAA 2 cut(s) 442, 1169
BsrDI GCAATG 2 cut(s) 1805, 2655
BsrGI TGTACA 1 cut(s) 1223
BsrI ACTGG 5 cut(s) 1392, 1595, 2299, 2482, 2701
BssECI CCNNGG 8 cut(s) 1111, 1559, 1792, 2509, 2661, 2941, 3034, 3167
BssNAI GTATAC 1 cut(s) 2012
BssT1I CCWWGG 4 cut(s) 1111, 1559, 2661, 3167
Bst1107I GTATAC 1 cut(s) 2012
Bst2UI CCWGG 1 cut(s) 1460
Bst4CI ACNGT 6 cut(s) 120, 728, 1223, 2213, 2394, 2935
Bst6I CTCTTC 6 cut(s) 168, 775, 1191, 2406, 2415, 2797
BstAUI TGTACA 1 cut(s) 1223
BstBI TTCGAA 2 cut(s) 442, 1169
BstC8I GCNNGC 2 cut(s) 67, 1284
BstDSI CCRYGG 1 cut(s) 1792
BstEII GGTNACC 2 cut(s) 533, 680
BstF5I GGATG 4 cut(s) 1373, 2330, 2885, 2906
BstFNI CGCG 1 cut(s) 2430
BstH2I RGCGCY 2 cut(s) 188, 3030
BstHHI GCGC 3 cut(s) 187, 2954, 3029
BstMAI GTCTC 6 cut(s) 172, 344, 1674, 1694, 2134, 2814
BstMWI GCNNNNNNNGC 5 cut(s) 191, 1693, 1807, 2353, 3143
BstNI CCWGG 1 cut(s) 1460
BstNSI RCATGY 2 cut(s) 847, 2035
BstPI GGTNACC 2 cut(s) 533, 680
BstSCI CCNGG 4 cut(s) 1458, 1928, 2940, 2941
BstSFI CTRYAG 2 cut(s) 104, 1633
BstSLI GKGCMC 2 cut(s) 1047, 1935
BstUI CGCG 1 cut(s) 2430
BstV1I GCAGC 7 cut(s) 242, 822, 1158, 1879, 2661, 2966, 3149
BstV2I GAAGAC 1 cut(s) 1089
BstX2I RGATCY 2 cut(s) 1162, 1462
BstXI CCANNNNNNTGG 4 cut(s) 293, 1340, 1734, 1793
BstYI RGATCY 2 cut(s) 1162, 1462
BstZ17I GTATAC 1 cut(s) 2012
Bsu15I ATCGAT 1 cut(s) 1855
Bsu36I CCTNAGG 2 cut(s) 1151, 1291
BsuI GTATCC 1 cut(s) 2390
BsuRI GGCC 6 cut(s) 1045, 1558, 1866, 1933, 2107, 2223
BsuTUI ATCGAT 1 cut(s) 1855
BtgI CCRYGG 1 cut(s) 1792
BtsCI GGATG 4 cut(s) 1373, 2330, 2885, 2906
BtsIMutI CAGTG 2 cut(s) 1385, 2694
BveI ACCTGC 1 cut(s) 918
Cac8I GCNNGC 2 cut(s) 67, 1284
CciI TCATGA 1 cut(s) 1585
CfoI GCGC 3 cut(s) 187, 2954, 3029
Cfr9I CCCGGG 1 cut(s) 2941
ClaI ATCGAT 1 cut(s) 1855
CseI GACGC 2 cut(s) 1676, 2677
Csp6I GTAC 2 cut(s) 1137, 1224
CviQI GTAC 2 cut(s) 1137, 1224
DrdI GACNNNNNNGTC 1 cut(s) 2504
DseDI GACNNNNNNGTC 1 cut(s) 2504
EaeI YGGCCR 1 cut(s) 2105
Eam1104I CTCTTC 6 cut(s) 168, 775, 1191, 2406, 2415, 2797
EarI CTCTTC 6 cut(s) 168, 775, 1191, 2406, 2415, 2797
Eco130I CCWWGG 4 cut(s) 1111, 1559, 2661, 3167
Eco24I GRGCYC 2 cut(s) 1047, 1935
Eco32I GATATC 1 cut(s) 1749
Eco47I GGWCC 4 cut(s) 310, 1563, 1643, 2448
Eco47III AGCGCT 2 cut(s) 186, 3028
Eco57I CTGAAG 4 cut(s) 1328, 1649, 2658, 2838
Eco81I CCTNAGG 2 cut(s) 1151, 1291
Eco88I CYCGRG 1 cut(s) 2941
Eco91I GGTNACC 2 cut(s) 533, 680
EcoO109I RGGNCCY 3 cut(s) 1044, 1563, 1643
EcoO65I GGTNACC 2 cut(s) 533, 680
EcoRI GAATTC 4 cut(s) 444, 1474, 2081, 2847
EcoRII CCWGG 1 cut(s) 1458
EcoRV GATATC 1 cut(s) 1749
EcoT14I CCWWGG 4 cut(s) 1111, 1559, 2661, 3167
EcoT22I ATGCAT 2 cut(s) 167, 1027
EcoT38I GRGCYC 2 cut(s) 1047, 1935
ErhI CCWWGG 4 cut(s) 1111, 1559, 2661, 3167
Esp3I CGTCTC 2 cut(s) 172, 1694
FalI AAGNNNNNCTT 9 cut(s) 2290, 2322, 2776, 2808, 2836, 2868, 3125, 3157, 3166
FaqI GGGAC 6 cut(s) 1240, 1449, 1549, 2461, 2568, 2680
FauI CCCGC 1 cut(s) 941
FbaI TGATCA 4 cut(s) 214, 331, 1951, 2974
FblI GTMKAC 2 cut(s) 110, 2011
FokI GGATG 4 cut(s) 1360, 2317, 2872, 2893
FriOI GRGCYC 2 cut(s) 1047, 1935
FspBI CTAG 6 cut(s) 1029, 1451, 1560, 1884, 1965, 2520
GlaI GCGC 3 cut(s) 186, 2953, 3028
GsaI CCCAGC 3 cut(s) 674, 987, 2181
GsuI CTGGAG 2 cut(s) 2097, 3076
HaeII RGCGCY 2 cut(s) 188, 3030
HaeIII GGCC 6 cut(s) 1045, 1558, 1866, 1933, 2107, 2223
HapII CCGG 5 cut(s) 222, 1929, 2334, 2841, 2942
HgaI GACGC 2 cut(s) 1676, 2677
HhaI GCGC 3 cut(s) 187, 2954, 3029
Hin6I GCGC 3 cut(s) 185, 2952, 3027
HinP1I GCGC 3 cut(s) 185, 2952, 3027
HincII GTYRAC 1 cut(s) 841
HindII GTYRAC 1 cut(s) 841
HindIII AAGCTT 4 cut(s) 464, 472, 611, 1799
HpaII CCGG 5 cut(s) 222, 1929, 2334, 2841, 2942
HphI GGTGA 5 cut(s) 1286, 1448, 2149, 2753, 2984
Hpy166II GTNNAC 8 cut(s) 111, 802, 841, 922, 1277, 1456, 2012, 2292
Hpy8I GTNNAC 8 cut(s) 111, 802, 841, 922, 1277, 1456, 2012, 2292
HpyCH4III ACNGT 6 cut(s) 120, 728, 1223, 2213, 2394, 2935
HpyCH4IV ACGT 1 cut(s) 2377
HpyF10VI GCNNNNNNNGC 5 cut(s) 191, 1693, 1807, 2353, 3143
HpySE526I ACGT 1 cut(s) 2377
HspAI GCGC 3 cut(s) 185, 2952, 3027
Kpn2I TCCGGA 2 cut(s) 2333, 2840
Ksp22I TGATCA 4 cut(s) 214, 331, 1951, 2974
LmnI GCTCC 3 cut(s) 14, 1113, 3169
Lsp1109I GCAGC 7 cut(s) 242, 822, 1158, 1879, 2661, 2966, 3149
LweI GCATC 5 cut(s) 101, 174, 1012, 1034, 1879
MaeI CTAG 6 cut(s) 1029, 1451, 1560, 1884, 1965, 2520
MaeII ACGT 1 cut(s) 2377
MaeIII GTNAC 4 cut(s) 208, 533, 680, 1242
MfeI CAATTG 3 cut(s) 1955, 2322, 3147
MflI RGATCY 2 cut(s) 1162, 1462
MhlI GDGCHC 3 cut(s) 1047, 1935, 2399
MlsI TGGCCA 1 cut(s) 2107
MluNI TGGCCA 1 cut(s) 2107
MlyI GAGTC 4 cut(s) 1250, 1424, 2107, 2206
MmeI TCCRAC 2 cut(s) 288, 2385
Mox20I TGGCCA 1 cut(s) 2107
Mph1103I ATGCAT 2 cut(s) 167, 1027
MroI TCCGGA 2 cut(s) 2333, 2840
MroXI GAANNNNTTC 4 cut(s) 1178, 1211, 1488, 2851
MscI TGGCCA 1 cut(s) 2107
MslI CAYNNNNRTG 6 cut(s) 160, 291, 2001, 2165, 2911, 2982
Msp20I TGGCCA 1 cut(s) 2107
MspA1I CMGCKG 2 cut(s) 987, 2957
MspI CCGG 5 cut(s) 222, 1929, 2334, 2841, 2942
MspR9I CCNGG 4 cut(s) 1460, 1930, 2942, 2943
MunI CAATTG 3 cut(s) 1955, 2322, 3147
Mva1269I GAATGC 2 cut(s) 1302, 1488
MvaI CCWGG 1 cut(s) 1460
MvnI CGCG 1 cut(s) 2430
MwoI GCNNNNNNNGC 5 cut(s) 191, 1693, 1807, 2353, 3143
NciI CCSGG 3 cut(s) 1930, 2942, 2943
NlaIV GGNNCC 7 cut(s) 1045, 1565, 1596, 1933, 2222, 2449, 3165
NmeAIII GCCGAG 1 cut(s) 3015
NmuCI GTSAC 1 cut(s) 1242
NsiI ATGCAT 2 cut(s) 167, 1027
NspI RCATGY 2 cut(s) 847, 2035
NspV TTCGAA 2 cut(s) 442, 1169
PagI TCATGA 1 cut(s) 1585
PaqCI CACCTGC 1 cut(s) 918
PciI ACATGT 1 cut(s) 2031
PcsI WCGNNNNNNNCGW 1 cut(s) 1175
PctI GAATGC 2 cut(s) 1302, 1488
PdmI GAANNNNTTC 4 cut(s) 1178, 1211, 1488, 2851
PfeI GAWTC 6 cut(s) 517, 664, 1613, 2776, 2882, 3111
PflMI CCANNNNNTGG 4 cut(s) 530, 677, 1264, 2501
PleI GAGTC 4 cut(s) 1249, 1423, 2106, 2205
PpsI GAGTC 4 cut(s) 1249, 1423, 2106, 2205
PpuMI RGGWCCY 2 cut(s) 1563, 1643
PscI ACATGT 1 cut(s) 2031
PshBI ATTAAT 2 cut(s) 372, 2271
PsiI TTATAA 3 cut(s) 1101, 1782, 3080
Psp5II RGGWCCY 2 cut(s) 1563, 1643
Psp6I CCWGG 1 cut(s) 1458
PspEI GGTNACC 2 cut(s) 533, 680
PspFI CCCAGC 3 cut(s) 670, 983, 2177
PspGI CCWGG 1 cut(s) 1458
PspN4I GGNNCC 7 cut(s) 1045, 1565, 1596, 1933, 2222, 2449, 3165
PspOMI GGGCCC 2 cut(s) 1043, 1931
PspPPI RGGWCCY 2 cut(s) 1563, 1643
PsrI GAACNNNNNNTAC 2 cut(s) 389, 421
PstI CTGCAG 2 cut(s) 108, 1637
PsuI RGATCY 2 cut(s) 1162, 1462
PvuII CAGCTG 2 cut(s) 987, 2957
RsaI GTAC 2 cut(s) 1138, 1225
RsaNI GTAC 2 cut(s) 1137, 1224
RseI CAYNNNNRTG 6 cut(s) 160, 291, 2001, 2165, 2911, 2982
SchI GAGTC 4 cut(s) 1250, 1424, 2107, 2206
ScrFI CCNGG 4 cut(s) 1460, 1930, 2942, 2943
SduI GDGCHC 3 cut(s) 1047, 1935, 2399
SfaNI GCATC 5 cut(s) 101, 174, 1012, 1034, 1879
SfcI CTRYAG 2 cut(s) 104, 1633
SfuI TTCGAA 2 cut(s) 442, 1169
SinI GGWCC 4 cut(s) 310, 1563, 1643, 2448
SmaI CCCGGG 1 cut(s) 2943
SmiMI CAYNNNNRTG 6 cut(s) 160, 291, 2001, 2165, 2911, 2982
SmlI CTYRAG 4 cut(s) 475, 1070, 1969, 2088
SmoI CTYRAG 4 cut(s) 475, 1070, 1969, 2088
SsiI CCGC 8 cut(s) 420, 934, 1287, 1896, 2263, 2373, 2430, 2728
SspMI CTAG 6 cut(s) 1029, 1451, 1560, 1884, 1965, 2520
StyD4I CCNGG 4 cut(s) 1458, 1928, 2940, 2941
StyI CCWWGG 4 cut(s) 1111, 1559, 2661, 3167
TaaI ACNGT 6 cut(s) 120, 728, 1223, 2213, 2394, 2935
TaiI ACGT 1 cut(s) 2380
TaqI TCGA 8 cut(s) 168, 442, 1169, 1620, 1855, 1905, 2565, 3109
TatI WGTACW 1 cut(s) 1223
TauI GCSGC 3 cut(s) 1289, 1898, 2433
TfiI GAWTC 6 cut(s) 517, 664, 1613, 2776, 2882, 3111
TscAI CASTG 2 cut(s) 1392, 2701
TseFI GTSAC 1 cut(s) 1242
TseI GCWGC 7 cut(s) 255, 810, 1146, 1892, 2649, 2954, 3137
Tsp45I GTSAC 1 cut(s) 1242
TspGWI ACGGA 3 cut(s) 450, 907, 1781
TspMI CCCGGG 1 cut(s) 2941
TspRI CASTG 2 cut(s) 1392, 2701
Van91I CCANNNNNTGG 4 cut(s) 530, 677, 1264, 2501
VpaK11BI GGWCC 4 cut(s) 310, 1563, 1643, 2448
VspI ATTAAT 2 cut(s) 372, 2271
XapI RAATTY 9 cut(s) 444, 591, 885, 1119, 1474, 2081, 2152, 2226, 2847
XceI RCATGY 2 cut(s) 847, 2035
XcmI CCANNNNNNNNNTGG 1 cut(s) 2584
XmaI CCCGGG 1 cut(s) 2941
XmaJI CCTAGG 1 cut(s) 1559
XmiI GTMKAC 2 cut(s) 110, 2011
XmnI GAANNNNTTC 4 cut(s) 1178, 1211, 1488, 2851
XspI CTAG 6 cut(s) 1029, 1451, 1560, 1884, 1965, 2520
Zsp2I ATGCAT 2 cut(s) 167, 1027
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.