Rroxscaffold_1G00056900

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
78866041 .. 78868938
2898 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00056900.1

Sequence Viewer

Length: 2898 bp
ATGGTTAACCTGAACCCTATCTCTCACCTCATTCTTCACCTTTTGCTCTTGCTATTTTTAGCTTCTTCAGGTTCGGGGAATGGAGTTCCTGGTTCGTGCTTGGAGGAAGAAAGACAAGCTCTTCTCAGCTTCAAACATGATCTTGCCGATCTTTCAGGCAGGCCTTCTGTCAGGCTTTCTTCTTGGGTGGGTCATGCATGCTGTCAATGGCAAGGGATTTCATGCAACAACCGAACTGGTCATGTTGAAAAGATGGACCTCCGAAATACATATCTAGATACCTACCAGGTTTGGAACTACACTAAGTATAACCAGTCCTTTTTAGTGGGTAAGATAAATCCTTCTTTGCTTCGCTTGAAACATTTATCTTACTTAGATCTAAGCCAGAACAATTTTCAATCCGTTCACATCCCCAAGTTCATTGGCCAGCTTACGAGTTTAAGGTATCTCAATCTCTCATATTCCAACTTTACAGGAGAGATTCCCTCTTCTGTTGGTAACCTCTCAAACTTGAACTGTTTGGACCTCAATTTTTATTATGATGGTGTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTATCTTCCTTAAAATATCTCAATCTTGGAGGTGTGAACCTCAACCGCACAGGAGTAAGTTGGCTACATGATGTCAGCATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTGATTGCCAAATTAATGGAAACCAGTTTCCACTCTCCCTACCCACAATTAACTTCACATCACTTTTGGTCCTTGATATGTCTTACATTGTTATTAATTCTTCATTCCCCACATGGCTTTTAAATCTTACTCGCCTCAAATCCCTCGAACACCTAGACTTATCTGGTATGTATCTCCAAGGTCAAATTCCTCAAGTTATTGGACATCTGTGCAAGCTAAAGATGTTAAATCTCAGGGGGAACCAATTTAGCGGAGGTCTTCAAGAGATTTTGAGTGGTTTCTCAAATTGTCGAGATAATGAGGGGATGGTAAGTGAATTGCAGCATCTTGACCTCCGTTCCAACTCTTTTTCTGGATCATTTCCAGAATCTTTTCGACCCTTACCATCCTTGAAAACACTTTACCTCAGCGGCAACTCTTTTTCTGGATCACTTCCAGAATCATTTCGACACTTTTCGTCCTTGGAAACACTGGATCTCTCTGATAATGGTATGAACGGTTCCATTATTCCTCAAATTTTGGGACAACTCTCTCAGCTAGTCTACCTAGATCTGTCTCGGAATTCATGGAAAGGAATTCTAACGGAAGCGCATCTCATGAACCTCACGAGATTGAAGACATTTGGAATAGGCCCAGACAGACCTGATTTGTCATCATCCCTCATTTTCAATGTGACTGATGGCTGGGTTCCCCCATTCAACCTCAGCGAAGTTTACATTCAAAACTGCAGAGTGGGTCCTGCGTTTCCGGTATGGCTTCGATCTCAAATTCAACTAGTTGATGTCTGGCTTGATAATACTGGAATTTCTGATCGAATTCCTGAGGAATGGCTCTTGAAGATATCTTCACAGGTTGAATCCTTGCATTTACCGAACAATGACATTGGCGGAAAACTTCCCTTCCAATTCAAGTTTCCGAAAATAACTGTCATAGATTTGCGTCGTAGTCAATTTGAAGGCATACTCCAGCAGCTTTTGCCCACTAATGTGCCTCTATTAGAAGAGTTGTATCTTTCTGATAATCATTTGGAAGGAACTATTCCACCTTCAATTTGCCAATTGCAACATATGGCAATTCTTTCTCTAAGAAACAATCAGTTTTCTGGAGAGTTCCCTCAAGAATGGAGCCTGTGGAGCCACATAGGTGTCGTGGATGTCTCAAACAACAATCTCTCTGGTAATATTCCCAGTTCAATGGGCATCCCAAGTTCTCTTGAAGTTTTGAAGATGAACAACAATAATTTTAGGGGAGAAATTCCTTCTTCCTTGCAAAATTGCTCGGGTTTGTTTGATATTGACTTTAGTGGCAACAAACTCACTGGAATCCTACCTGTATGGGTGGGGTCAGAGCTATCTCAATTGCAAGTTCTAAAATTGCGATTCAACTTTTTGAGCGGAAATATTCCCAAACAGTTGTGCAATCTTCAATTCCTTCATATCATAGACCTCGGCCATAACAACATTTCGGGAACTATTCCCACATGTTTGAGTAATTTGACTACTCTACGCTCCTATGAAGCCACTTCGTATGGGTTTGGTTATTACGACGAGTTAACAACTGTTATCATGAAAGGAAGAGAACTTGAATATAGCACTTATCACGCTTTATCTTTGGTAATGAGCATTGACTTTTCATGTAATAATTTAGAAGGTGAAATCCCTGAAGATATAAGCTCTCTCGTTGGATTGGGTTCCTTGAACTTGTCGAGGAACCATTTAATTGGGAAGATACCATGGAAGTTCAGAAACTTAAGCAGGTTGGAAACTCTTGATCTCTCACACAATCACCTTTCAGGGGAGATTCCCCAAAGCTTTTCTTCTTTGACCTCGTTGTCTCACTTGAACTTGTCTTGTAATAACCTTTCTGGAAGAATCCCTTCAGGGCCCCAACTTCAAACATTGGATAATTCGTCCTACATGGAGAATCCATCACTCTGTGGTTTTCCTCTTTCAACCAAGTGCCAGGGAGATGACACGATCACAAAACAAACTTTTCATGGAAGAGACAGTGAAGATGAAGATGATAAGGGAAAGCTTGGTTTCTATATCAGCATGGTCTTTGGGTTTGTCATAGGCTTTTGGGGTGTTTGTGGCACGTTACTCATAAAGAAGTCATGGAGGTATGCCTATTTTCAATTCTTTGGCAACATCAAAGATAAAATAGCACTGGCACTTGCTTTAAAAGTAGCTTGTTTGCAGAGAAGATTCTGA

Protein Analysis

965

Amino Acids

108.03

Weight (kDa)

6.2

Isoelectric Point (pI)

42.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 76 5.5e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 116 - 229 5.9e-10 Leucine-rich repeat region
LRR_8 PF13855 335 - 393 3e-12 Leucine rich repeat
LRR_14 PF23598 335 - 484 1.3e-10 Leucine-rich repeat region
LRR_14 PF23598 768 - 864 2.9e-07 Leucine-rich repeat region
LRR_8 PF13855 810 - 850 5.5e-08 Leucine rich repeat
LRR_4 PF12799 815 - 852 1.9e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2518
Acc36I ACCTGC 1 cut(s) 2433
AccBSI CCGCTC 1 cut(s) 2082
AccI GTMKAC 1 cut(s) 1230
AciI CCGC 5 cut(s) 625, 939, 1098, 1575, 2082
AclWI GGATC 3 cut(s) 1051, 1123, 1170
AcoI YGGCCR 2 cut(s) 424, 2137
AcsI RAATTY 8 cut(s) 873, 1203, 1249, 1263, 1455, 1491, 1503, 1941
AcuI CTGAAG 3 cut(s) 51, 2370, 2550
AdeI CACNNNGTG 1 cut(s) 2624
AfiI CCNNNNNNNGG 1 cut(s) 2482
AflII CTTAAG 1 cut(s) 2437
AflIII ACRYGT 1 cut(s) 2168
AhlI ACTAGT 1 cut(s) 1462
AjnI CCWGG 3 cut(s) 88, 285, 2649
AjuI GAANNNNNNNTTGG 4 cut(s) 858, 890, 1584, 1616
AleI CACNNNNGTG 2 cut(s) 1673, 1830
Alw26I GTCTC 4 cut(s) 1248, 1849, 2526, 2685
AlwI GGATC 3 cut(s) 1051, 1123, 1170
Ama87I CYCGRG 1 cut(s) 1966
AoxI GGCC 5 cut(s) 161, 424, 1318, 2137, 2570
ApaI GGGCCC 1 cut(s) 2574
ApeKI GCWGC 2 cut(s) 1009, 1657
ApoI RAATTY 8 cut(s) 873, 1203, 1249, 1263, 1455, 1491, 1503, 1941
AseI ATTAAT 2 cut(s) 702, 783
Asp700I GAANNNNTTC 3 cut(s) 1059, 1131, 2563
AspLEI GCGC 1 cut(s) 1279
AspS9I GGNCC 7 cut(s) 256, 523, 757, 1319, 1424, 2570, 2571
AsuHPI GGTGA 4 cut(s) 17, 29, 2351, 2465
AvaI CYCGRG 1 cut(s) 1966
AvaII GGWCC 4 cut(s) 256, 523, 757, 1424
AxyI CCTNAGG 1 cut(s) 1509
BaeGI GKGCMC 1 cut(s) 2574
BalI TGGCCA 1 cut(s) 426
BanII GRGCYC 1 cut(s) 2574
BauI CACGAG 1 cut(s) 1294
BbsI GAAGAC 2 cut(s) 938, 1310
BbvCI CCTCAGC 2 cut(s) 1094, 1391
BbvI GCAGC 2 cut(s) 1021, 1669
BccI CCATC 6 cut(s) 247, 536, 988, 1081, 1361, 2623
BciT130I CCWGG 3 cut(s) 90, 287, 2651
BcoDI GTCTC 4 cut(s) 1248, 1849, 2526, 2685
BcuI ACTAGT 1 cut(s) 1462
BfaI CTAG 5 cut(s) 275, 842, 1226, 1235, 1463
BfmI CTRYAG 1 cut(s) 1414
BfrI CTTAAG 1 cut(s) 2437
BfuAI ACCTGC 1 cut(s) 2433
BglII AGATCT 2 cut(s) 376, 1237
BisI GCNGC 3 cut(s) 1010, 1099, 1658
BlsI GCNGC 3 cut(s) 1011, 1100, 1659
Bme1390I CCNGG 3 cut(s) 90, 287, 2651
Bme18I GGWCC 4 cut(s) 256, 523, 757, 1424
BmeT110I CYCGRG 1 cut(s) 1966
BmgT120I GGNCC 7 cut(s) 256, 523, 757, 1319, 1424, 2570, 2571
BmrFI CCNGG 3 cut(s) 90, 287, 2651
BmrI ACTGGG 1 cut(s) 1869
BmsI GCATC 3 cut(s) 1021, 1288, 1896
BmuI ACTGGG 1 cut(s) 1869
BpiI GAAGAC 2 cut(s) 938, 1310
BplI GAGNNNNNCTC 2 cut(s) 470, 502
BpmI CTGGAG 2 cut(s) 1637, 1812
Bpu10I CCTNAGC 2 cut(s) 1094, 1391
BpuEI CTTGAG 2 cut(s) 864, 1788
BsaJI CCNNGG 5 cut(s) 865, 1149, 2134, 2420, 2650
BsaWI WCCGGW 1 cut(s) 1435
Bsc4I CCNNNNNNNGG 1 cut(s) 2482
Bse1I ACTGG 8 cut(s) 241, 313, 712, 1164, 1492, 1875, 2011, 2859
Bse21I CCTNAGG 1 cut(s) 1509
BseBI CCWGG 3 cut(s) 90, 287, 2651
BseDI CCNNGG 5 cut(s) 865, 1149, 2134, 2420, 2650
BseGI GGATG 6 cut(s) 408, 999, 1073, 1343, 1846, 1887
BseLI CCNNNNNNNGG 1 cut(s) 2482
BseMII CTCAG 6 cut(s) 139, 934, 1108, 1235, 1405, 1500
BseNI ACTGG 8 cut(s) 241, 313, 712, 1164, 1492, 1875, 2011, 2859
BseSI GKGCMC 1 cut(s) 2574
BseXI GCAGC 2 cut(s) 1021, 1669
BseYI CCCAGC 1 cut(s) 1371
BshFI GGCC 5 cut(s) 163, 426, 1320, 2139, 2572
BsiHKCI CYCGRG 1 cut(s) 1966
BsiSI CCGG 1 cut(s) 1436
BslFI GGGAC 1 cut(s) 1224
BslI CCNNNNNNNGG 1 cut(s) 2482
BsmAI GTCTC 4 cut(s) 1248, 1849, 2526, 2685
BsmFI GGGAC 1 cut(s) 1224
BsnI GGCC 5 cut(s) 163, 426, 1320, 2139, 2572
BsoBI CYCGRG 1 cut(s) 1966
Bsp120I GGGCCC 1 cut(s) 2570
Bsp1286I GDGCHC 1 cut(s) 2574
Bsp19I CCATGG 1 cut(s) 2420
BspACI CCGC 5 cut(s) 625, 939, 1098, 1575, 2082
BspANI GGCC 5 cut(s) 163, 426, 1320, 2139, 2572
BspCNI CTCAG 6 cut(s) 138, 933, 1107, 1234, 1404, 1501
BspHI TCATGA 2 cut(s) 1284, 2253
BspMAI CTGCAG 1 cut(s) 1418
BspMI ACCTGC 1 cut(s) 2433
BspPI GGATC 3 cut(s) 1051, 1123, 1170
BspQI GCTCTTC 1 cut(s) 126
BspTI CTTAAG 1 cut(s) 2437
BsrBI CCGCTC 1 cut(s) 2082
BsrI ACTGG 8 cut(s) 241, 313, 712, 1164, 1492, 1875, 2011, 2859
BssECI CCNNGG 5 cut(s) 865, 1149, 2134, 2420, 2650
BssSI CACGAG 1 cut(s) 1294
BssT1I CCWWGG 3 cut(s) 865, 1149, 2420
Bst2BI CACGAG 1 cut(s) 1294
Bst2UI CCWGG 3 cut(s) 90, 287, 2651
Bst4CI ACNGT 6 cut(s) 518, 1187, 1615, 2100, 2248, 2696
Bst6I CTCTTC 5 cut(s) 126, 493, 1683, 2257, 2683
BstAFI CTTAAG 1 cut(s) 2437
BstAPI GCANNNNNTGC 1 cut(s) 1663
BstC8I GCNNGC 5 cut(s) 161, 199, 428, 659, 902
BstDSI CCRYGG 1 cut(s) 2420
BstEII GGTNACC 1 cut(s) 497
BstF5I GGATG 6 cut(s) 408, 999, 1073, 1343, 1846, 1887
BstHHI GCGC 1 cut(s) 1279
BstMAI GTCTC 4 cut(s) 1248, 1849, 2526, 2685
BstMWI GCNNNNNNNGC 2 cut(s) 1663, 1821
BstNI CCWGG 3 cut(s) 90, 287, 2651
BstNSI RCATGY 3 cut(s) 201, 661, 2172
BstPI GGTNACC 1 cut(s) 497
BstSCI CCNGG 3 cut(s) 88, 285, 2649
BstSFI CTRYAG 1 cut(s) 1414
BstSLI GKGCMC 1 cut(s) 2574
BstV1I GCAGC 2 cut(s) 1021, 1669
BstV2I GAAGAC 2 cut(s) 938, 1310
BstX2I RGATCY 3 cut(s) 376, 1162, 1237
BstXI CCANNNNNNTGG 3 cut(s) 704, 1882, 2408
BstYI RGATCY 3 cut(s) 376, 1162, 1237
Bsu36I CCTNAGG 1 cut(s) 1509
BsuRI GGCC 5 cut(s) 163, 426, 1320, 2139, 2572
BtgI CCRYGG 1 cut(s) 2420
BtsCI GGATG 6 cut(s) 408, 999, 1073, 1343, 1846, 1887
BtsIMutI CAGTG 4 cut(s) 1157, 2004, 2701, 2852
BveI ACCTGC 1 cut(s) 2433
Cac8I GCNNGC 5 cut(s) 161, 199, 428, 659, 902
CciI TCATGA 2 cut(s) 1284, 2253
CfoI GCGC 1 cut(s) 1279
Cfr13I GGNCC 7 cut(s) 256, 523, 757, 1319, 1424, 2570, 2571
CseI GACGC 1 cut(s) 1616
CsiI ACCWGGT 1 cut(s) 285
DraI TTTAAA 2 cut(s) 810, 2868
DraIII CACNNNGTG 1 cut(s) 2624
DrdI GACNNNNNNGTC 1 cut(s) 2518
DseDI GACNNNNNNGTC 1 cut(s) 2518
EaeI YGGCCR 2 cut(s) 424, 2137
Eam1104I CTCTTC 5 cut(s) 126, 493, 1683, 2257, 2683
EarI CTCTTC 5 cut(s) 126, 493, 1683, 2257, 2683
EciI GGCGGA 1 cut(s) 1590
Eco130I CCWWGG 3 cut(s) 865, 1149, 2420
Eco147I AGGCCT 1 cut(s) 163
Eco24I GRGCYC 1 cut(s) 2574
Eco32I GATATC 1 cut(s) 1530
Eco47I GGWCC 4 cut(s) 256, 523, 757, 1424
Eco57I CTGAAG 3 cut(s) 51, 2370, 2550
Eco81I CCTNAGG 1 cut(s) 1509
Eco88I CYCGRG 1 cut(s) 1966
Eco91I GGTNACC 1 cut(s) 497
EcoO109I RGGNCCY 3 cut(s) 1424, 2570, 2571
EcoO65I GGTNACC 1 cut(s) 497
EcoRI GAATTC 3 cut(s) 1249, 1263, 1503
EcoRII CCWGG 3 cut(s) 88, 285, 2649
EcoRV GATATC 1 cut(s) 1530
EcoT14I CCWWGG 3 cut(s) 865, 1149, 2420
EcoT22I ATGCAT 1 cut(s) 199
EcoT38I GRGCYC 1 cut(s) 2574
ErhI CCWWGG 3 cut(s) 865, 1149, 2420
FalI AAGNNNNNCTT 4 cut(s) 2488, 2520, 2548, 2580
FaqI GGGAC 1 cut(s) 1224
FauNDI CATATG 1 cut(s) 1755
FblI GTMKAC 1 cut(s) 1230
Fnu4HI GCNGC 3 cut(s) 1010, 1099, 1658
FokI GGATG 6 cut(s) 395, 1006, 1060, 1330, 1853, 1874
FriOI GRGCYC 1 cut(s) 2574
Fsp4HI GCNGC 3 cut(s) 1010, 1099, 1658
FspBI CTAG 5 cut(s) 275, 842, 1226, 1235, 1463
GlaI GCGC 1 cut(s) 1278
GluI GCNGC 3 cut(s) 1010, 1099, 1658
GsaI CCCAGC 1 cut(s) 1375
GsuI CTGGAG 2 cut(s) 1637, 1812
HaeIII GGCC 5 cut(s) 163, 426, 1320, 2139, 2572
HapII CCGG 1 cut(s) 1436
HgaI GACGC 1 cut(s) 1616
HhaI GCGC 1 cut(s) 1279
Hin6I GCGC 1 cut(s) 1277
HinP1I GCGC 1 cut(s) 1277
HincII GTYRAC 2 cut(s) 7, 2241
HindII GTYRAC 2 cut(s) 7, 2241
HindIII AAGCTT 2 cut(s) 2497, 2720
HpaI GTTAAC 2 cut(s) 7, 2241
HpaII CCGG 1 cut(s) 1436
HphI GGTGA 4 cut(s) 17, 29, 2351, 2465
Hpy166II GTNNAC 6 cut(s) 7, 406, 616, 1231, 1402, 2241
Hpy8I GTNNAC 6 cut(s) 7, 406, 616, 1231, 1402, 2241
Hpy99I CGWCG 2 cut(s) 1632, 2237
HpyCH4III ACNGT 6 cut(s) 518, 1187, 1615, 2100, 2248, 2696
HpyCH4IV ACGT 1 cut(s) 2783
HpyF10VI GCNNNNNNNGC 2 cut(s) 1663, 1821
HpySE526I ACGT 1 cut(s) 2783
HspAI GCGC 1 cut(s) 1277
KspAI GTTAAC 2 cut(s) 7, 2241
LguI GCTCTTC 1 cut(s) 126
LmnI GCTCC 3 cut(s) 1812, 1821, 2201
Lsp1109I GCAGC 2 cut(s) 1021, 1669
LweI GCATC 3 cut(s) 1021, 1288, 1896
MabI ACCWGGT 1 cut(s) 285
MaeI CTAG 5 cut(s) 275, 842, 1226, 1235, 1463
MaeII ACGT 1 cut(s) 2783
MaeIII GTNAC 3 cut(s) 497, 1360, 2784
MbiI CCGCTC 1 cut(s) 2082
MfeI CAATTG 2 cut(s) 1745, 2045
MflI RGATCY 3 cut(s) 376, 1162, 1237
MhlI GDGCHC 1 cut(s) 2574
MlsI TGGCCA 1 cut(s) 426
MluNI TGGCCA 1 cut(s) 426
MmeI TCCRAC 4 cut(s) 489, 1053, 2350, 2427
Mox20I TGGCCA 1 cut(s) 426
Mph1103I ATGCAT 1 cut(s) 199
MroXI GAANNNNTTC 3 cut(s) 1059, 1131, 2563
MscI TGGCCA 1 cut(s) 426
MslI CAYNNNNRTG 2 cut(s) 1673, 1830
Msp20I TGGCCA 1 cut(s) 426
MspA1I CMGCKG 1 cut(s) 1098
MspCI CTTAAG 1 cut(s) 2437
MspI CCGG 1 cut(s) 1436
MspR9I CCNGG 3 cut(s) 90, 287, 2651
MunI CAATTG 2 cut(s) 1745, 2045
MvaI CCWGG 3 cut(s) 90, 287, 2651
MwoI GCNNNNNNNGC 2 cut(s) 1663, 1821
NcoI CCATGG 1 cut(s) 2420
NdeI CATATG 1 cut(s) 1755
NmeAIII GCCGAG 1 cut(s) 2115
NmuCI GTSAC 1 cut(s) 1360
NsiI ATGCAT 1 cut(s) 199
NspI RCATGY 3 cut(s) 201, 661, 2172
OliI CACNNNNGTG 2 cut(s) 1673, 1830
PaeI GCATGC 2 cut(s) 201, 661
PagI TCATGA 2 cut(s) 1284, 2253
PceI AGGCCT 1 cut(s) 163
PciI ACATGT 1 cut(s) 2168
PciSI GCTCTTC 1 cut(s) 126
PdmI GAANNNNTTC 3 cut(s) 1059, 1131, 2563
PkrI GCNGC 3 cut(s) 1011, 1100, 1659
PpuMI RGGWCCY 1 cut(s) 1424
PscI ACATGT 1 cut(s) 2168
PshBI ATTAAT 2 cut(s) 702, 783
Psp5II RGGWCCY 1 cut(s) 1424
Psp6I CCWGG 3 cut(s) 88, 285, 2649
PspEI GGTNACC 1 cut(s) 497
PspFI CCCAGC 1 cut(s) 1371
PspGI CCWGG 3 cut(s) 88, 285, 2649
PspOMI GGGCCC 1 cut(s) 2570
PspPI GGNCC 7 cut(s) 256, 523, 757, 1319, 1424, 2570, 2571
PspPPI RGGWCCY 1 cut(s) 1424
PsrI GAACNNNNNNTAC 2 cut(s) 1171, 1203
PstI CTGCAG 1 cut(s) 1418
PsuI RGATCY 3 cut(s) 376, 1162, 1237
RseI CAYNNNNRTG 2 cut(s) 1673, 1830
SapI GCTCTTC 1 cut(s) 126
SatI GCNGC 3 cut(s) 1010, 1099, 1658
Sau96I GGNCC 7 cut(s) 256, 523, 757, 1319, 1424, 2570, 2571
ScrFI CCNGG 3 cut(s) 90, 287, 2651
SduI GDGCHC 1 cut(s) 2574
SexAI ACCWGGT 1 cut(s) 285
SfaNI GCATC 3 cut(s) 1021, 1288, 1896
SfcI CTRYAG 1 cut(s) 1414
SinI GGWCC 4 cut(s) 256, 523, 757, 1424
SmiMI CAYNNNNRTG 2 cut(s) 1673, 1830
SmlI CTYRAG 3 cut(s) 879, 1803, 2437
SmoI CTYRAG 3 cut(s) 879, 1803, 2437
SpeI ACTAGT 1 cut(s) 1462
SphI GCATGC 2 cut(s) 201, 661
SseBI AGGCCT 1 cut(s) 163
SsiI CCGC 5 cut(s) 625, 939, 1098, 1575, 2082
SspI AATATT 2 cut(s) 1870, 2089
SspMI CTAG 5 cut(s) 275, 842, 1226, 1235, 1463
StuI AGGCCT 1 cut(s) 163
StyD4I CCNGG 3 cut(s) 88, 285, 2649
StyI CCWWGG 3 cut(s) 865, 1149, 2420
TaaI ACNGT 6 cut(s) 518, 1187, 1615, 2100, 2248, 2696
TaiI ACGT 1 cut(s) 2786
TaqI TCGA 7 cut(s) 834, 979, 1063, 1135, 1447, 1501, 2393
TauI GCSGC 1 cut(s) 1101
TscAI CASTG 4 cut(s) 1164, 2011, 2701, 2859
TseFI GTSAC 1 cut(s) 1360
TseI GCWGC 2 cut(s) 1009, 1657
Tsp45I GTSAC 1 cut(s) 1360
TspGWI ACGGA 3 cut(s) 391, 1013, 1286
TspRI CASTG 4 cut(s) 1164, 2011, 2701, 2859
Vha464I CTTAAG 1 cut(s) 2437
VpaK11BI GGWCC 4 cut(s) 256, 523, 757, 1424
VspI ATTAAT 2 cut(s) 702, 783
XapI RAATTY 8 cut(s) 873, 1203, 1249, 1263, 1455, 1491, 1503, 1941
XbaI TCTAGA 1 cut(s) 274
XceI RCATGY 3 cut(s) 201, 661, 2172
XmiI GTMKAC 1 cut(s) 1230
XmnI GAANNNNTTC 3 cut(s) 1059, 1131, 2563
XspI CTAG 5 cut(s) 275, 842, 1226, 1235, 1463
Zsp2I ATGCAT 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.