Rorug01G0004400

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
970611 .. 978037
7427 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0004400.1

Sequence Viewer

Length: 3270 bp
ATGGCGGACCAGCCGGGCAAGGCCGAATTGAGCGCAGTGCGGTTCAAAAACAAAATGGAGGACATAAGTAACGATCTCGATGACACTTACCGTACGGACTCTGTGATTTCTGTTAATTGTGAGGGAAAAGTCGAGCTTGGTCCCTGTTGGCGTAAGATTCCCCCTGCTTCTGTTGAAGAGTTACTCAAGGTTGAGCCGTCAAGACTTGTTCCGGTCCACTGTCGATGTCGAGGTGAAGAAATTTCATGGAATCAGTGGTCAGATAAACCATTCACAAGTTGGCCCACCTATGAGGAAGCTTGGACTACCTGGGTTGGAAAGATGCTTCCTTATTATGGTGACCATTGGAAGAAGGCCAACATCTATGACGCAATAATGCTCTCTGCCAGGCGCTTCTTGCCCGACAAGGCCCTGCTCAGCGCTGGATTTTGCTTTTGGAATTCATCATCCAACACTCTAGATTTGCCTCTGGGGATGATGAGTGTGAGTTTGCTTGACGTTGCTGCAATTGCTGGGTTTAGGCCTCATGGCACCAGTTATGACTGCACTGGTGAGTTGGGGCTGAAAACTAAATTTAGTTACTACTTCCATGGTCGGCATGAGGCATATGGAAGTTGGATAGCACAGCATAATAGGGATTGGAAACCCAATGTCAAAAGCAACAAAGTCCTCGTATTTGAGGATTTCCAGCACATAAAGGAAACCATGCAAACTACCAGAATCACCGATCAAGAGCATATATCATTCCTCCTCTACTGGCTCTGCAGGTATGTCTTCTGTGTACCTTCGATAGGCATTGAAAAAGAATGGTCTCATTTGGCACAAGTTTTGCATCAAAGAACTGATGTTGCCTTAGGTGAATTAGTGCTAGCCTCACTGTATAGGGGTTTGCAAAAAATCACTGCCAACCCATTTGATGGTAAAGCTCAGGGGCCATTTTGGCTGTTCCAAATGTGGTTACAGATTTACTTCCCAGACCTAGGCGCAGTCAGTACCTTTCCTGCCGATGAGGTTATGGGGTTTGCTTTGACAAACCAAATCCCAAAACTACACTCCCCTCGTGATTGCTTTGCAACGTTATGGAGTTTCAAATCAAACCCATTTTGGACGCACACCTTGACAAGAAGGTATCCCAGTTTCCTAAGAAATAGGTTCATAGATGGTTCAACGTCCGATAGTGCCTTAGATGAGGAAATAGAAGCTGTGCTAACGAGTGTGGTGGTACAAAGAGATCTGCTGTACGGAGGGATCAAAACCGGTAAATATTATGGAGTCCAGGCCGAATTTTACGGCCCGAACCATTTCAGTAGGCAGTTTGGTTGTATACAAGGAATTCCTTACTCTGGTCATGAAAGTGTTAATTGTTATACCTCATGGAGGGATGTATTAATAAATGCTGCGAAAATCAGAGGCGTCTCAAATTCCTTTCGTTCTACAAAGTTGAAACCATTCCTCACCAGGTATTTGCCAACCTCTGAAACTACCCCAGGCTTTGACAAATGGTGGCATAGTCAAACCAAAGGTCGATTTTCAGCAGAACATTATGGGCCCTTTGCTATCTTATATATGCATTTTCCATTCCGGGATAGCTATCATCTAGAAGTTCCAGGCTTTCCACCTGCTGTTGGAGAAAGGGAAGAAGGTGAAGAAGGAGAAGCTAAAGTTGAAAGCTCTCTCCCTACCAACAAGAATCGAAAGAGGAAACGCACCACAAATGCTCCTGTGTCAACTAGGCGGAAGACTACTGAAGTCACAGCTGTAGAATCTGGAATGAAGACAAATGGATTTAAAGATGAAGAAGCAGAGGAAATTGATGGCCGTCATACCCTGAATACCTTCGGAACTATGAAAAAGCTGAGGCCAGCTTTTTCAAGTGACACTGTGAATATCAAAACTGAAGAACCCGAACAGACTGAAGGACCATTGATGGGAACTGTGGAGCTAGGAAGTGAACAAATGTGTAGCGATGATGTTTCCTTAGCTGCCTTTGCACTTATCAGGATGCACCGAGTTCAATGTGAGCCAACCACGCCAGTTCCAGACTTAATAGAGAGCAATGTGGGGACCTCAAACCATGAAAAGTTGAAAGTGTGGGAAAATAATATAGCAAACTCTGCATCTGTTGAGGCCTCCAAACCTGCAAATGATGATCCTGCAGAAGCTGCCTCCGAACCCGAACAGACTGAAGGGACATTGATGGGAACTGTGGAGCTAGGAAGTGAACAAATGTGTAGCGATGCTGCTGCCTTAGCTGCCATTGCACTTATCAGGATGCACCGAGTTCAATGTGAGCCAACCATGCTAGTTCCAGACTTAATAGAGAGCAACATGGGGACCTCAAACCATGAAAAGTTGAAAGTGGGGGAAAATAATATAGCAAACTCTGCATCTGTCGAGGCCTCCAAACCTGCAGAAGATGATCCTGCAGAAGCTGCCTCCGAACCCGAACAAACTGAAGGGCCATTGTTGGGAACTGTGGAGCTTGGAAGTGAACAAATGTGTAGCGATGCTGCTGCCTTAGAAGCTTTCTCTAAGAAGATGCACGGAGTTCAAAGTGAGCCAACCACGCTAGTTCAAGTATTATTACTCAATAAAAAGTTTGGAGTGTTGAAAATTATTGTATTCAACTCTGCATCTGTCAAGGCCTCCAAACCTGCAGAAGAAGATCCTGCTTGTTCCGTTATTGCCAACGTGGTTCGACGCACGTTGGAGAAATTTGAGGATATCCCTTTCGGTATGCAAGGACAACTAATGGAGGCATTAAATTTTCTTGGAGGCAGAGTTCGAGTAAATCATGCGGTAATTAATAAAGTGGAAGAGTATTTTAACGTGCTTACATGTATCAAGGAGGACAAAACTAGGAATTCCAAGACGTTGACTTTGCTCCAAGATTTAGATCAACAACGTAGGGACGTCCGGAATAAGAAGGCTGGAGCAGAAATTGAAGCAAAGAAGTTGGTAATTCCATTTCTACAAAGAGTAGAGAAAATTATTGAATTGGATAAAAAAATAAAGGTACTTGTAGCAAGGAAGCGTATGATGACACAAGCACAAAATATTGCTGATGAAAGGCTTGCACCAGTTGATTTGTTGAGAGCTCAACTGTCCAAACACGATCTTCAGTCTGAAATACTTAAGATTAAATTAGAACTGCACAGTAGCAAGATTTGGTGTGACACTGTATATCAGCTTATAGACGAAACATTTGGGATTTTTTTTTGGGATGAGATTTGTGGAACAAAAGGAATGCTCACTTCCTTTTTGGGATGA

Protein Analysis

1089

Amino Acids

122.51

Weight (kDa)

5.88

Isoelectric Point (pI)

42.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 121 - 451 9.3e-29 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1627
AatII GACGTC 1 cut(s) 2916
Acc36I ACCTGC 5 cut(s) 756, 1627, 2146, 2416, 2662
AccB1I GGYRCC 1 cut(s) 530
AccB7I CCANNNNNTGG 1 cut(s) 917
AccI GTMKAC 1 cut(s) 1324
AccIII TCCGGA 1 cut(s) 2916
AciI CCGC 4 cut(s) 5, 40, 1735, 2798
AclI AACGTT 1 cut(s) 1076
AclWI GGATC 4 cut(s) 1256, 2144, 2414, 2660
AcoI YGGCCR 1 cut(s) 1816
AcsI RAATTY 9 cut(s) 240, 439, 572, 1283, 1332, 1420, 2714, 2764, 2863
AcuI CTGAAG 6 cut(s) 1767, 1917, 1935, 2205, 2475, 3104
AcyI GRCGYC 2 cut(s) 1413, 2913
AfaI GTAC 6 cut(s) 94, 783, 994, 1224, 1241, 3018
AfeI AGCGCT 1 cut(s) 421
AfiI CCNNNNNNNGG 9 cut(s) 335, 791, 917, 980, 1343, 1377, 1625, 1928, 2468
AflII CTTAAG 1 cut(s) 3134
AflIII ACRYGT 1 cut(s) 2837
AgeI ACCGGT 1 cut(s) 1256
AjnI CCWGG 6 cut(s) 308, 386, 1275, 1457, 1486, 1606
AloI GAACNNNNNNTCC 2 cut(s) 2766, 2798
Alw21I GWGCWC 1 cut(s) 3100
Alw26I GTCTC 2 cut(s) 816, 1420
AlwI GGATC 4 cut(s) 1256, 2144, 2414, 2660
AlwNI CAGNNNCTG 2 cut(s) 2162, 2432
Aor13HI TCCGGA 1 cut(s) 2916
Aor51HI AGCGCT 1 cut(s) 421
ApaI GGGCCC 1 cut(s) 1551
ApoI RAATTY 9 cut(s) 240, 439, 572, 1283, 1332, 1420, 2714, 2764, 2863
ArsI GACNNNNNNTTYG 6 cut(s) 1507, 1539, 2863, 2895, 3188, 3220
AseI ATTAAT 2 cut(s) 1388, 2805
AsiGI ACCGGT 1 cut(s) 1256
Asp700I GAANNNNTTC 3 cut(s) 1301, 1448, 1835
AspA2I CCTAGG 1 cut(s) 979
AspLEI GCGC 4 cut(s) 35, 393, 422, 986
AsuC2I CCSGG 2 cut(s) 15, 1583
AsuHPI GGTGA 7 cut(s) 245, 350, 563, 715, 869, 1447, 1655
AsuNHI GCTAGC 1 cut(s) 868
AvaII GGWCC 6 cut(s) 7, 140, 214, 1919, 2064, 2334
AvrII CCTAGG 1 cut(s) 979
AxyI CCTNAGG 1 cut(s) 853
BaeGI GKGCMC 1 cut(s) 1551
BanI GGYRCC 1 cut(s) 530
BanII GRGCYC 2 cut(s) 1551, 3100
BauI CACGAG 1 cut(s) 1059
BbsI GAAGAC 3 cut(s) 766, 1745, 1781
Bbv12I GWGCWC 1 cut(s) 3100
BbvCI CCTCAGC 1 cut(s) 1856
BccI CCATC 5 cut(s) 911, 1154, 1808, 1921, 2191
BceAI ACGGC 3 cut(s) 181, 1306, 1803
BcgI CGANNNNNNTGC 4 cut(s) 2225, 2259, 2495, 2529
BciT130I CCWGG 6 cut(s) 310, 388, 1277, 1459, 1488, 1608
BciVI GTATCC 1 cut(s) 1140
BcnI CCSGG 2 cut(s) 15, 1583
BcoDI GTCTC 2 cut(s) 816, 1420
BfmI CTRYAG 6 cut(s) 763, 1758, 2154, 2409, 2424, 2655
BfoI RGCGCY 2 cut(s) 394, 423
BfrI CTTAAG 1 cut(s) 3134
BfuAI ACCTGC 5 cut(s) 756, 1627, 2146, 2416, 2662
BfuI GTATCC 1 cut(s) 1140
BglI GCCNNNNNGGC 1 cut(s) 940
BglII AGATCT 1 cut(s) 1231
BlnI CCTAGG 1 cut(s) 979
BlpI GCTNAGC 1 cut(s) 416
Bme1390I CCNGG 8 cut(s) 15, 310, 388, 1277, 1459, 1488, 1583, 1608
Bme18I GGWCC 6 cut(s) 7, 140, 214, 1919, 2064, 2334
BmiI GGNNCC 6 cut(s) 142, 532, 933, 1549, 2065, 2335
BmrFI CCNGG 8 cut(s) 15, 310, 388, 1277, 1459, 1488, 1583, 1608
BmrI ACTGGG 1 cut(s) 1128
BmtI GCTAGC 1 cut(s) 872
BmuI ACTGGG 1 cut(s) 1128
BpiI GAAGAC 3 cut(s) 766, 1745, 1781
BpmI CTGGAG 1 cut(s) 2952
Bpu10I CCTNAGC 4 cut(s) 927, 1856, 1978, 2248
Bpu1102I GCTNAGC 1 cut(s) 416
BpuEI CTTGAG 1 cut(s) 170
BpuMI CCSGG 2 cut(s) 15, 1583
BsaBI GATNNNNATC 2 cut(s) 1590, 2895
BsaHI GRCGYC 2 cut(s) 1413, 2913
BsaI GGTCTC 1 cut(s) 816
BsaJI CCNNGG 4 cut(s) 309, 589, 979, 1486
BsaWI WCCGGW 3 cut(s) 211, 1256, 2916
BsaXI ACNNNNNCTCC 4 cut(s) 1702, 1732, 2766, 2796
Bsc4I CCNNNNNNNGG 9 cut(s) 335, 791, 917, 980, 1343, 1377, 1625, 1928, 2468
Bse118I RCCGGY 1 cut(s) 1256
Bse1I ACTGG 6 cut(s) 534, 553, 761, 1134, 2033, 3080
Bse21I CCTNAGG 1 cut(s) 853
Bse3DI GCAATG 2 cut(s) 2062, 2256
Bse8I GATNNNNATC 2 cut(s) 1590, 2895
BseAI TCCGGA 1 cut(s) 2916
BseBI CCWGG 6 cut(s) 310, 388, 1277, 1459, 1488, 1608
BseDI CCNNGG 4 cut(s) 309, 589, 979, 1486
BseGI GGATG 6 cut(s) 446, 480, 1387, 2007, 2277, 3229
BseJI GATNNNNATC 2 cut(s) 1590, 2895
BseLI CCNNNNNNNGG 9 cut(s) 335, 791, 917, 980, 1343, 1377, 1625, 1928, 2468
BseMI GCAATG 2 cut(s) 2062, 2256
BseMII CTCAG 3 cut(s) 430, 941, 1847
BseNI ACTGG 6 cut(s) 534, 553, 761, 1134, 2033, 3080
BseRI GAGGAG 1 cut(s) 740
BseSI GKGCMC 1 cut(s) 1551
BseYI CCCAGC 1 cut(s) 512
BsgI GTGCAG 2 cut(s) 529, 3137
BshNI GGYRCC 1 cut(s) 530
BshTI ACCGGT 1 cut(s) 1256
BsiHKAI GWGCWC 1 cut(s) 3100
BsiSI CCGG 5 cut(s) 14, 212, 1257, 1582, 2917
BsiWI CGTACG 1 cut(s) 92
BslFI GGGAC 5 cut(s) 126, 2077, 2203, 2347, 2924
BslI CCNNNNNNNGG 9 cut(s) 335, 791, 917, 980, 1343, 1377, 1625, 1928, 2468
BsmAI GTCTC 2 cut(s) 816, 1420
BsmBI CGTCTC 1 cut(s) 1420
BsmFI GGGAC 5 cut(s) 126, 2077, 2203, 2347, 2924
BsmI GAATGC 1 cut(s) 3252
Bso31I GGTCTC 1 cut(s) 816
Bsp120I GGGCCC 1 cut(s) 1547
Bsp1286I GDGCHC 2 cut(s) 1551, 3100
Bsp13I TCCGGA 1 cut(s) 2916
Bsp143I GATC 9 cut(s) 73, 727, 1231, 1248, 2149, 2419, 2665, 2896, 3115
Bsp1720I GCTNAGC 1 cut(s) 416
Bsp19I CCATGG 1 cut(s) 589
BspACI CCGC 4 cut(s) 5, 40, 1735, 2798
BspCNI CTCAG 3 cut(s) 429, 940, 1848
BspEI TCCGGA 1 cut(s) 2916
BspHI TCATGA 1 cut(s) 1348
BspLI GGNNCC 6 cut(s) 142, 532, 933, 1549, 2065, 2335
BspMAI CTGCAG 5 cut(s) 767, 2158, 2413, 2428, 2659
BspMI ACCTGC 5 cut(s) 756, 1627, 2146, 2416, 2662
BspOI GCTAGC 1 cut(s) 872
BspPI GGATC 4 cut(s) 1256, 2144, 2414, 2660
BspT107I GGYRCC 1 cut(s) 530
BspTI CTTAAG 1 cut(s) 3134
BspTNI GGTCTC 1 cut(s) 816
BsrDI GCAATG 2 cut(s) 2062, 2256
BsrFI RCCGGY 1 cut(s) 1256
BsrI ACTGG 6 cut(s) 534, 553, 761, 1134, 2033, 3080
BssAI RCCGGY 1 cut(s) 1256
BssECI CCNNGG 4 cut(s) 309, 589, 979, 1486
BssMI GATC 9 cut(s) 73, 727, 1231, 1248, 2149, 2419, 2665, 2896, 3115
BssNAI GTATAC 1 cut(s) 1325
BssNI GRCGYC 2 cut(s) 1413, 2913
BssSI CACGAG 1 cut(s) 1059
BssT1I CCWWGG 2 cut(s) 589, 979
Bst1107I GTATAC 1 cut(s) 1325
Bst2BI CACGAG 1 cut(s) 1059
Bst2UI CCWGG 6 cut(s) 310, 388, 1277, 1459, 1488, 1608
Bst6I CTCTTC 2 cut(s) 171, 2811
BstACI GRCGYC 2 cut(s) 1413, 2913
BstAFI CTTAAG 1 cut(s) 3134
BstAPI GCANNNNNTGC 4 cut(s) 2114, 2162, 2384, 2432
BstC8I GCNNGC 3 cut(s) 870, 1863, 3075
BstDSI CCRYGG 1 cut(s) 589
BstEII GGTNACC 1 cut(s) 338
BstENI CCTNNNNNAGG 2 cut(s) 789, 1375
BstF5I GGATG 6 cut(s) 446, 480, 1387, 2007, 2277, 3229
BstH2I RGCGCY 2 cut(s) 394, 423
BstHHI GCGC 4 cut(s) 35, 393, 422, 986
BstKTI GATC 9 cut(s) 76, 730, 1234, 1251, 2152, 2422, 2668, 2899, 3118
BstMAI GTCTC 2 cut(s) 816, 1420
BstMBI GATC 9 cut(s) 73, 727, 1231, 1248, 2149, 2419, 2665, 2896, 3115
BstNI CCWGG 6 cut(s) 310, 388, 1277, 1459, 1488, 1608
BstNSI RCATGY 1 cut(s) 2841
BstPI GGTNACC 1 cut(s) 338
BstSCI CCNGG 8 cut(s) 13, 308, 386, 1275, 1457, 1486, 1581, 1606
BstSFI CTRYAG 6 cut(s) 763, 1758, 2154, 2409, 2424, 2655
BstSLI GKGCMC 1 cut(s) 1551
BstV2I GAAGAC 3 cut(s) 766, 1745, 1781
BstX2I RGATCY 2 cut(s) 1231, 2665
BstYI RGATCY 2 cut(s) 1231, 2665
BstZ17I GTATAC 1 cut(s) 1325
Bsu36I CCTNAGG 1 cut(s) 853
BsuI GTATCC 1 cut(s) 1140
BtgI CCRYGG 1 cut(s) 589
BtgZI GCGATG 3 cut(s) 1980, 2250, 2520
BtsCI GGATG 6 cut(s) 446, 480, 1387, 2007, 2277, 3229
BtsI GCAGTG 2 cut(s) 42, 900
BtsIMutI CAGTG 8 cut(s) 42, 217, 260, 546, 875, 900, 1878, 3177
BveI ACCTGC 5 cut(s) 756, 1627, 2146, 2416, 2662
Cac8I GCNNGC 3 cut(s) 870, 1863, 3075
CaiI CAGNNNCTG 2 cut(s) 2162, 2432
CciI TCATGA 1 cut(s) 1348
CfoI GCGC 4 cut(s) 35, 393, 422, 986
Cfr10I RCCGGY 1 cut(s) 1256
CseI GACGC 4 cut(s) 377, 1117, 1402, 2709
CsiI ACCWGGT 1 cut(s) 1457
Csp6I GTAC 6 cut(s) 93, 782, 993, 1223, 1240, 3017
CspAI ACCGGT 1 cut(s) 1256
CviQI GTAC 6 cut(s) 93, 782, 993, 1223, 1240, 3017
DpnI GATC 9 cut(s) 75, 729, 1233, 1250, 2151, 2421, 2667, 2898, 3117
DpnII GATC 9 cut(s) 73, 727, 1231, 1248, 2149, 2419, 2665, 2896, 3115
DraI TTTAAA 1 cut(s) 1789
EaeI YGGCCR 1 cut(s) 1816
Eam1104I CTCTTC 2 cut(s) 171, 2811
EarI CTCTTC 2 cut(s) 171, 2811
EciI GGCGGA 2 cut(s) 20, 1750
Ecl136II GAGCTC 1 cut(s) 3098
Eco130I CCWWGG 2 cut(s) 589, 979
Eco147I AGGCCT 4 cut(s) 523, 2129, 2399, 2645
Eco24I GRGCYC 2 cut(s) 1551, 3100
Eco31I GGTCTC 1 cut(s) 816
Eco32I GATATC 1 cut(s) 2725
Eco47I GGWCC 6 cut(s) 7, 140, 214, 1919, 2064, 2334
Eco47III AGCGCT 1 cut(s) 421
Eco53kI GAGCTC 1 cut(s) 3098
Eco57I CTGAAG 6 cut(s) 1767, 1917, 1935, 2205, 2475, 3104
Eco81I CCTNAGG 1 cut(s) 853
Eco91I GGTNACC 1 cut(s) 338
EcoICRI GAGCTC 1 cut(s) 3098
EcoNI CCTNNNNNAGG 2 cut(s) 789, 1375
EcoO109I RGGNCCY 4 cut(s) 409, 1548, 2064, 2334
EcoO65I GGTNACC 1 cut(s) 338
EcoRI GAATTC 3 cut(s) 439, 1332, 2863
EcoRII CCWGG 6 cut(s) 308, 386, 1275, 1457, 1486, 1606
EcoRV GATATC 1 cut(s) 2725
EcoT14I CCWWGG 2 cut(s) 589, 979
EcoT22I ATGCAT 1 cut(s) 1572
EcoT38I GRGCYC 2 cut(s) 1551, 3100
ErhI CCWWGG 2 cut(s) 589, 979
Esp3I CGTCTC 1 cut(s) 1420
FalI AAGNNNNNCTT 2 cut(s) 120, 152
FaqI GGGAC 5 cut(s) 126, 2077, 2203, 2347, 2924
FauNDI CATATG 1 cut(s) 607
FblI GTMKAC 1 cut(s) 1324
FokI GGATG 6 cut(s) 433, 487, 1394, 2014, 2284, 3236
FriOI GRGCYC 2 cut(s) 1551, 3100
GlaI GCGC 4 cut(s) 34, 392, 421, 985
GsaI CCCAGC 1 cut(s) 516
GsuI CTGGAG 1 cut(s) 2952
HaeII RGCGCY 2 cut(s) 394, 423
HapII CCGG 5 cut(s) 14, 212, 1257, 1582, 2917
HgaI GACGC 4 cut(s) 377, 1117, 1402, 2709
HhaI GCGC 4 cut(s) 35, 393, 422, 986
Hin1I GRCGYC 2 cut(s) 1413, 2913
Hin6I GCGC 4 cut(s) 33, 391, 420, 984
HinP1I GCGC 4 cut(s) 33, 391, 420, 984
HincII GTYRAC 2 cut(s) 1728, 2877
HindII GTYRAC 2 cut(s) 1728, 2877
HindIII AAGCTT 2 cut(s) 297, 2523
HinfI GANTC 7 cut(s) 98, 157, 250, 720, 1272, 1690, 1763
HpaII CCGG 5 cut(s) 14, 212, 1257, 1582, 2917
HphI GGTGA 7 cut(s) 245, 350, 563, 715, 869, 1447, 1655
Hpy166II GTNNAC 8 cut(s) 217, 782, 1325, 1728, 1952, 2222, 2492, 2877
Hpy188I TCNGA 8 cut(s) 262, 1174, 1409, 1477, 1841, 2170, 2440, 3127
Hpy8I GTNNAC 8 cut(s) 217, 782, 1325, 1728, 1952, 2222, 2492, 2877
Hpy99I CGWCG 1 cut(s) 2703
HpyCH4IV ACGT 9 cut(s) 498, 1076, 1169, 2691, 2705, 2829, 2873, 2905, 2913
HpySE526I ACGT 9 cut(s) 498, 1076, 1169, 2691, 2705, 2829, 2873, 2905, 2913
Hsp92I GRCGYC 2 cut(s) 1413, 2913
HspAI GCGC 4 cut(s) 33, 391, 420, 984
Kpn2I TCCGGA 1 cut(s) 2916
Kzo9I GATC 9 cut(s) 73, 727, 1231, 1248, 2149, 2419, 2665, 2896, 3115
LmnI GCTCC 6 cut(s) 1723, 1939, 2209, 2479, 2889, 2933
MabI ACCWGGT 1 cut(s) 1457
MaeII ACGT 9 cut(s) 498, 1076, 1169, 2691, 2705, 2829, 2873, 2905, 2913
MaeIII GTNAC 8 cut(s) 68, 180, 338, 578, 957, 1750, 1874, 3173
MalI GATC 9 cut(s) 75, 729, 1233, 1250, 2151, 2421, 2667, 2898, 3117
MboI GATC 9 cut(s) 73, 727, 1231, 1248, 2149, 2419, 2665, 2896, 3115
MfeI CAATTG 1 cut(s) 507
MflI RGATCY 2 cut(s) 1231, 2665
MhlI GDGCHC 2 cut(s) 1551, 3100
MlyI GAGTC 2 cut(s) 92, 1281
MmeI TCCRAC 5 cut(s) 295, 474, 596, 1606, 2688
Mph1103I ATGCAT 1 cut(s) 1572
MroI TCCGGA 1 cut(s) 2916
MroXI GAANNNNTTC 3 cut(s) 1301, 1448, 1835
MslI CAYNNNNRTG 1 cut(s) 1353
MspA1I CMGCKG 1 cut(s) 1757
MspCI CTTAAG 1 cut(s) 3134
MspI CCGG 5 cut(s) 14, 212, 1257, 1582, 2917
MspR9I CCNGG 8 cut(s) 15, 310, 388, 1277, 1459, 1488, 1583, 1608
MunI CAATTG 1 cut(s) 507
Mva1269I GAATGC 1 cut(s) 3252
MvaI CCWGG 6 cut(s) 310, 388, 1277, 1459, 1488, 1608
NciI CCSGG 2 cut(s) 15, 1583
NcoI CCATGG 1 cut(s) 589
NdeI CATATG 1 cut(s) 607
NdeII GATC 9 cut(s) 73, 727, 1231, 1248, 2149, 2419, 2665, 2896, 3115
NheI GCTAGC 1 cut(s) 868
NlaIV GGNNCC 6 cut(s) 142, 532, 933, 1549, 2065, 2335
NmuCI GTSAC 4 cut(s) 338, 1750, 1874, 3173
NsiI ATGCAT 1 cut(s) 1572
NspI RCATGY 1 cut(s) 2841
PagI TCATGA 1 cut(s) 1348
PaqCI CACCTGC 1 cut(s) 1627
PceI AGGCCT 4 cut(s) 523, 2129, 2399, 2645
PciI ACATGT 1 cut(s) 2837
PctI GAATGC 1 cut(s) 3252
PdmI GAANNNNTTC 3 cut(s) 1301, 1448, 1835
PfeI GAWTC 5 cut(s) 157, 250, 720, 1690, 1763
Pfl23II CGTACG 1 cut(s) 92
PflMI CCANNNNNTGG 1 cut(s) 917
PfoI TCCNGGA 1 cut(s) 1581
PinAI ACCGGT 1 cut(s) 1256
PleI GAGTC 2 cut(s) 92, 1280
PpsI GAGTC 2 cut(s) 92, 1280
PpuMI RGGWCCY 2 cut(s) 2064, 2334
PscI ACATGT 1 cut(s) 2837
PshBI ATTAAT 2 cut(s) 1388, 2805
Psp124BI GAGCTC 1 cut(s) 3100
Psp1406I AACGTT 1 cut(s) 1076
Psp5II RGGWCCY 2 cut(s) 2064, 2334
Psp6I CCWGG 6 cut(s) 308, 386, 1275, 1457, 1486, 1606
PspEI GGTNACC 1 cut(s) 338
PspFI CCCAGC 1 cut(s) 512
PspGI CCWGG 6 cut(s) 308, 386, 1275, 1457, 1486, 1606
PspLI CGTACG 1 cut(s) 92
PspN4I GGNNCC 6 cut(s) 142, 532, 933, 1549, 2065, 2335
PspOMI GGGCCC 1 cut(s) 1547
PspPPI RGGWCCY 2 cut(s) 2064, 2334
PstI CTGCAG 5 cut(s) 767, 2158, 2413, 2428, 2659
PstNI CAGNNNCTG 2 cut(s) 2162, 2432
PsuI RGATCY 2 cut(s) 1231, 2665
PvuII CAGCTG 1 cut(s) 1757
RsaI GTAC 6 cut(s) 94, 783, 994, 1224, 1241, 3018
RsaNI GTAC 6 cut(s) 93, 782, 993, 1223, 1240, 3017
RseI CAYNNNNRTG 1 cut(s) 1353
SacI GAGCTC 1 cut(s) 3100
Sau3AI GATC 9 cut(s) 73, 727, 1231, 1248, 2149, 2419, 2665, 2896, 3115
SchI GAGTC 2 cut(s) 92, 1281
ScrFI CCNGG 8 cut(s) 15, 310, 388, 1277, 1459, 1488, 1583, 1608
SduI GDGCHC 2 cut(s) 1551, 3100
SexAI ACCWGGT 1 cut(s) 1457
SfcI CTRYAG 6 cut(s) 763, 1758, 2154, 2409, 2424, 2655
SinI GGWCC 6 cut(s) 7, 140, 214, 1919, 2064, 2334
SmiMI CAYNNNNRTG 1 cut(s) 1353
SmlI CTYRAG 2 cut(s) 185, 3134
SmoI CTYRAG 2 cut(s) 185, 3134
SseBI AGGCCT 4 cut(s) 523, 2129, 2399, 2645
SsiI CCGC 4 cut(s) 5, 40, 1735, 2798
SspI AATATT 2 cut(s) 1265, 3058
SstI GAGCTC 1 cut(s) 3100
StuI AGGCCT 4 cut(s) 523, 2129, 2399, 2645
StyD4I CCNGG 8 cut(s) 13, 308, 386, 1275, 1457, 1486, 1581, 1606
StyI CCWWGG 2 cut(s) 589, 979
TaiI ACGT 9 cut(s) 501, 1079, 1172, 2694, 2708, 2832, 2876, 2908, 2916
TfiI GAWTC 5 cut(s) 157, 250, 720, 1690, 1763
TscAI CASTG 8 cut(s) 42, 224, 260, 553, 882, 907, 1885, 3184
TseFI GTSAC 4 cut(s) 338, 1750, 1874, 3173
Tsp45I GTSAC 4 cut(s) 338, 1750, 1874, 3173
TspGWI ACGGA 4 cut(s) 110, 1257, 2559, 2668
TspRI CASTG 8 cut(s) 42, 224, 260, 553, 882, 907, 1885, 3184
Van91I CCANNNNNTGG 1 cut(s) 917
Vha464I CTTAAG 1 cut(s) 3134
VpaK11BI GGWCC 6 cut(s) 7, 140, 214, 1919, 2064, 2334
VspI ATTAAT 2 cut(s) 1388, 2805
XagI CCTNNNNNAGG 2 cut(s) 789, 1375
XapI RAATTY 9 cut(s) 240, 439, 572, 1283, 1332, 1420, 2714, 2764, 2863
XbaI TCTAGA 2 cut(s) 457, 1597
XceI RCATGY 1 cut(s) 2841
XcmI CCANNNNNNNNNTGG 1 cut(s) 276
XmaJI CCTAGG 1 cut(s) 979
XmiI GTMKAC 1 cut(s) 1324
XmnI GAANNNNTTC 3 cut(s) 1301, 1448, 1835
ZraI GACGTC 1 cut(s) 2914
Zsp2I ATGCAT 1 cut(s) 1572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.