RchiOBHm_Chr5g0022331

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
16344996 .. 16347962
2967 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30229

Sequence Viewer

Length: 2967 bp
ATGGATAGTTTTGCAAACTTTCCCAACCCTATCTATCATCTCAATATTGCTCTCTGTTTCCTCCTTTTGTTTTTAGCCTCTTCATGCCTAAACACTAGTAAACTCTGCTTGGGAGATGGCCTTCCAGTTGTGAAATGCATCGACAAAGAGAGAAGCGCACTTCTCATCTTTAAAGCAGATCTTATCGATGCTTCGGGTAGGCTATCATCTTGGGAGGGTCAAAATTGTTGTCAATGGAAAGGGATTTCATGCAACAACCACACTGGTCATGTTGAAAAGATGGACCTCTACAATACAAGTCCAGCTCCATCTATTGATGCTGAAGACCAGGAGTTGGAGGCTTATTATGAGTCCTTTTTGGGGGGTAAGATAAATCCTTCTTTGATTAGCTTAAAATATATGAGTTACTTAGACTTGAGCTCGAATGACTTTCAAGGGCTTCAAATTCCTAGGTTCTTTGGTCAGCTTAAAAGTTTGAAGTATCTCAATATCTCATATTCATCTTTTGAGGGACAGATTCCACCTCATCTTGGTAACCTATCATACTTGAACTATCTTGACCTTAGCGGTAACTATTTATTGGAAATTTCTTCCATAAATTTGAATTGGTTTTCTCATCTCTCCTCTCTAAAATACCTCAGTCTGAATGAAGTGGACCTTAGCAATGCAGGAGCCAGTTGGCTACATGTAGTTAACATGCTTCCTTCCATGCTAGAGTTACACTTGTCTAGATGCAACATTGAAAGCCTTCCACTTTCACTTCACACCATGAACCTCACATCACTTTTGATCCTTGATATGTCATTCAATGATTTTAAGTCTCCATTTCCAAAGTGGGTTTTTAATTTAACTAGCCTCAGAGAACTTCACTTGGCCAAGAATTCTTTCAGCGGTCCCTTTCCCAATGATATCGTTAACCTGAAATCATTGGAAGAACTTGATTTATCTCTTAATGGCCTTCACGGTCGAATTCCCAAATTCTTTGGAAATCTCTGCAACCTAAGGACCTTAATTCTTATGGGAAATGCATTTGATCAGGGTATTCCAGAGTTTTTGGATGGTTTATCAGGTTGTGCAAATAATAAGTTGGAGTCACTAGACTTGTCTAGTAATAAGCTGGTAGGCGAATTGCCTGCCTCCTTAGGGATGCTCCCCCATTTGCAGTACCTTAACCTCTTCGACAATCATTTGAATGGATCCATCCCGGAAAGTTTGGGACGACTCTCTGAGCTAGTTCATCTAGACCTATCGGGCAACTCATTGGTAGGCTTTTTAACTGAAGCCCATTTCATAGATCTCACGAAGTTAAAATACATTGCACTGGGCAATATCAGTAACCCCAACCTGCTGCCTTCCATCATTTTCAATGTGGCTTATGAGTGGGTTCCTCCTTTCAAGCTTGACACCATTGCCATCACGAACTGTCAAGTAGGTCCTGCCTTTTCACTATGGCTTCTATCTCAAACTGAACTAGTATATGTCACTCTAAGCAATACAGGCATCTCGGATTCCATACCAGAGGAATGGTTCGTGAAAATATCTTCCCAACTCCAATATTTGGATTTAGGTTACAATCAAATTCGTGGAAAGCTTCCAGTCCAACTGATAGTTCCAAATTTAGTGACTCTAGATTTGAGACATAATCAATTCCACGGCTCACTCCCGCTTTGGTTGTGTAAGGAGGCTTCCTACCTAAATCTTGTTAGCAATTCATTTTCCGGGCCAATTCCGTTAACTTTTGACCAACATTTTCCAAAATTGCAACAACTGCATCTCTATGAAAATTATTTGAATGGCACGATTCCATCCTCTGTTTGTAATATGCAGAAGTTGTTAATCTTTTCTCTAAGAAGCAACAACATTTCTGGAGAATTTCCTCAAGCATGGAGTATGTGGGGTGACATATACACTGTAGATGTTGGAGACAATCATCTCTCAGGAAATATTCCCAGTTCAATGGGTATCCCAAGTTCACTTTACATGTTGTCGATGAAGAACAACAAATTCGATGGTGAAATCCCAATGGCCTTGGGAAATTGCACCAACCTGAGGAGTATTGATCTTGGTGGTAATAGATTTACTGGAAACCTACCTTCATGGATAGGAACAAATGTATCCAAGGTGTTCATCTTACGACTGCCATCCAATTATCTAAGTGGACATATTCCCCAGCAATTGTGCAATCTTGGCTACCTTCACCTCCTTGATCTTGGTCATAACCACCTCTCAGGTACTATACCAAAGTGTTTGAATAATATGACTGCTCTAACAGATGTCAAGTTCAATGCTTATGCCTTATATCATGCGTATGAACAACAAATAATGGTGACCAAAGGAAGAGAATTCCAATATAACAAGACTCTAAGGTGGGTAAAAAGCATGGATCTTTCCTCAAATAGTTTGGAAGGTGAAATCCCTAAAAAAATATGTAGTCTCTTCGCATTGGTTATCTTGAACTTGTCGATGAATCATCTAAGTGGAAATATTCCCTCGAAAATTGGAAACTTGCGGTCGCTCGAATTCCTTGATCTCTCAGTCAACCACCTTTCGGGACGAATTCCTCAAAGTATTTCATCTTTAACCTATTTGTCTCACTTGAATTTGTCTTACAACGAATTGAGCGGAAGAATTCCTTTGGGCAACCAACTTCAAGCACTTGATGATTCAACCAATATTTATGGGGGCAACCCATCACTTTGTGGGGTTCCCCTTTTAAATAGGTGCTCAGGAGATGACACACCTCCACAACCCACTTTTCCTAGGGGGAAAAGACATGAAGATGATAAAAAGTTTGGTTTTTACGTTAGCGCAGTGCTTGGCTTTATCATAGGCTTTTGGGGTGTTTGTGGCACATTACTCATAAAGAAGTCGTGGAGGTATGCCTACTTTCAATCCTTTGATAGCATCTACGATAAGGTAGCGGTGGCAGTTGCATTGAAAATGGCTCATTTCCAAAGGAAAATTTGA

Protein Analysis

988

Amino Acids

110.3

Weight (kDa)

6.24

Isoelectric Point (pI)

36.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 48 - 85 1.1e-10 Leucine rich repeat N-terminal domain
LRR_8 PF13855 135 - 193 1.3e-06 Leucine rich repeat
LRR_14 PF23598 197 - 438 3.1e-15 Leucine-rich repeat region
LRR_14 PF23598 794 - 871 8.5e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1353
AccB7I CCANNNNNTGG 2 cut(s) 334, 1558
AccBSI CCGCTC 1 cut(s) 2622
AciI CCGC 6 cut(s) 567, 891, 1664, 2509, 2622, 2921
AclWI GGATC 4 cut(s) 784, 1191, 1204, 2391
AcoI YGGCCR 1 cut(s) 873
AcuI CTGAAG 2 cut(s) 342, 1299
AdeI CACNNNGTG 1 cut(s) 2699
AfaI GTAC 2 cut(s) 1166, 2233
AfiI CCNNNNNNNGG 7 cut(s) 334, 360, 530, 1143, 1558, 2049, 2548
AflIII ACRYGT 2 cut(s) 685, 1980
AhlI ACTAGT 2 cut(s) 95, 1471
AjnI CCWGG 1 cut(s) 327
AjuI GAANNNNNNNTTGG 4 cut(s) 869, 901, 1593, 1625
AluBI AGCT 8 cut(s) 305, 390, 420, 466, 1117, 1231, 1399, 1591
AluI AGCT 8 cut(s) 305, 390, 420, 466, 1117, 1231, 1399, 1591
Alw21I GWGCWC 2 cut(s) 422, 2726
Alw26I GTCTC 5 cut(s) 825, 1630, 1917, 2438, 2595
AlwI GGATC 4 cut(s) 784, 1191, 1204, 2391
AoxI GGCC 5 cut(s) 118, 873, 955, 1721, 2025
ApeKI GCWGC 1 cut(s) 1348
ArsI GACNNNNNNTTYG 4 cut(s) 214, 246, 1615, 1647
Asp700I GAANNNNTTC 2 cut(s) 747, 884
AspA2I CCTAGG 2 cut(s) 449, 2759
AspLEI GCGC 2 cut(s) 158, 2810
AspS9I GGNCC 6 cut(s) 283, 655, 893, 1005, 1433, 1721
AsuC2I CCSGG 2 cut(s) 1205, 1720
AsuHPI GGTGA 5 cut(s) 1910, 2024, 2189, 2338, 2420
AvaII GGWCC 5 cut(s) 283, 655, 893, 1005, 1433
AvrII CCTAGG 2 cut(s) 449, 2759
AxyI CCTNAGG 3 cut(s) 1001, 1141, 2048
BaeI ACNNNNGTAYC 2 cut(s) 2097, 2130
BalI TGGCCA 1 cut(s) 875
BamHI GGATCC 1 cut(s) 1196
BanII GRGCYC 1 cut(s) 422
BarI GAAGNNNNNNTAC 4 cut(s) 1295, 1327, 1669, 1701
BbsI GAAGAC 1 cut(s) 330
Bbv12I GWGCWC 2 cut(s) 422, 2726
BbvI GCAGC 1 cut(s) 1335
BceAI ACGGC 1 cut(s) 1669
BcgI CGANNNNNNTGC 2 cut(s) 1115, 1149
BciT130I CCWGG 1 cut(s) 329
BciVI GTATCC 2 cut(s) 1973, 2125
BclI TGATCA 1 cut(s) 1033
BcnI CCSGG 2 cut(s) 1205, 1720
BcoDI GTCTC 5 cut(s) 825, 1630, 1917, 2438, 2595
BcuI ACTAGT 2 cut(s) 95, 1471
BfmI CTRYAG 1 cut(s) 1911
BfuAI ACCTGC 1 cut(s) 1353
BfuI GTATCC 2 cut(s) 1973, 2125
BglII AGATCT 2 cut(s) 178, 1294
BisI GCNGC 1 cut(s) 1349
BlnI CCTAGG 2 cut(s) 449, 2759
BlsI GCNGC 1 cut(s) 1350
Bme1390I CCNGG 3 cut(s) 329, 1205, 1720
Bme18I GGWCC 5 cut(s) 283, 655, 893, 1005, 1433
BmgT120I GGNCC 6 cut(s) 283, 655, 893, 1005, 1433, 1721
BmiI GGNNCC 5 cut(s) 673, 895, 1198, 1386, 2706
BmrFI CCNGG 3 cut(s) 329, 1205, 1720
BmrI ACTGGG 2 cut(s) 1331, 1944
BmsI GCATC 8 cut(s) 147, 178, 307, 722, 1137, 1509, 1780, 2913
BmuI ACTGGG 2 cut(s) 1331, 1944
BpiI GAAGAC 1 cut(s) 330
BpmI CTGGAG 1 cut(s) 1887
Bpu10I CCTNAGC 3 cut(s) 563, 659, 2725
BpuEI CTTGAG 2 cut(s) 436, 1863
BpuMI CCSGG 2 cut(s) 1205, 1720
Bsa29I ATCGAT 1 cut(s) 186
BsaJI CCNNGG 5 cut(s) 449, 1651, 2028, 2118, 2759
Bsc4I CCNNNNNNNGG 7 cut(s) 334, 360, 530, 1143, 1558, 2049, 2548
Bse1I ACTGG 7 cut(s) 125, 268, 675, 1326, 1595, 1950, 2086
Bse21I CCTNAGG 3 cut(s) 1001, 1141, 2048
Bse3DI GCAATG 3 cut(s) 670, 1314, 1407
BseBI CCWGG 1 cut(s) 329
BseCI ATCGAT 1 cut(s) 186
BseDI CCNNGG 5 cut(s) 449, 1651, 2028, 2118, 2759
BseGI GGATG 5 cut(s) 1063, 1152, 1200, 1805, 2141
BseLI CCNNNNNNNGG 7 cut(s) 334, 360, 530, 1143, 1558, 2049, 2548
BseMI GCAATG 3 cut(s) 670, 1314, 1407
BseMII CTCAG 8 cut(s) 652, 871, 1218, 1950, 2039, 2241, 2547, 2739
BseNI ACTGG 7 cut(s) 125, 268, 675, 1326, 1595, 1950, 2086
BseRI GAGGAG 2 cut(s) 613, 2065
BseXI GCAGC 1 cut(s) 1335
BseYI CCCAGC 1 cut(s) 2169
Bsh1285I CGRYCG 2 cut(s) 967, 2513
BshFI GGCC 5 cut(s) 120, 875, 957, 1723, 2027
BshVI ATCGAT 1 cut(s) 186
BsiEI CGRYCG 2 cut(s) 967, 2513
BsiHKAI GWGCWC 2 cut(s) 422, 2726
BsiSI CCGG 2 cut(s) 1205, 1719
BslFI GGGAC 4 cut(s) 525, 879, 1230, 2565
BslI CCNNNNNNNGG 7 cut(s) 334, 360, 530, 1143, 1558, 2049, 2548
BsmAI GTCTC 5 cut(s) 825, 1630, 1917, 2438, 2595
BsmFI GGGAC 4 cut(s) 525, 879, 1230, 2565
BsnI GGCC 5 cut(s) 120, 875, 957, 1723, 2027
Bsp1286I GDGCHC 2 cut(s) 422, 2726
Bsp143I GATC 9 cut(s) 178, 789, 1033, 1196, 1294, 2059, 2206, 2383, 2527
BspACI CCGC 6 cut(s) 567, 891, 1664, 2509, 2622, 2921
BspANI GGCC 5 cut(s) 120, 875, 957, 1723, 2027
BspCNI CTCAG 8 cut(s) 651, 870, 1219, 1949, 2040, 2240, 2546, 2738
BspDI ATCGAT 1 cut(s) 186
BspLI GGNNCC 5 cut(s) 673, 895, 1198, 1386, 2706
BspMI ACCTGC 1 cut(s) 1353
BspPI GGATC 4 cut(s) 784, 1191, 1204, 2391
BsrBI CCGCTC 1 cut(s) 2622
BsrDI GCAATG 3 cut(s) 670, 1314, 1407
BsrI ACTGG 7 cut(s) 125, 268, 675, 1326, 1595, 1950, 2086
BssECI CCNNGG 5 cut(s) 449, 1651, 2028, 2118, 2759
BssMI GATC 9 cut(s) 178, 789, 1033, 1196, 1294, 2059, 2206, 2383, 2527
BssT1I CCWWGG 4 cut(s) 449, 2028, 2118, 2759
Bst2UI CCWGG 1 cut(s) 329
Bst4CI ACNGT 3 cut(s) 965, 1424, 1912
Bst6I CTCTTC 4 cut(s) 85, 1181, 2332, 2441
BstAPI GCANNNNNTGC 1 cut(s) 1768
BstC8I GCNNGC 1 cut(s) 1134
BstDSI CCRYGG 1 cut(s) 1651
BstEII GGTNACC 2 cut(s) 533, 2326
BstF5I GGATG 5 cut(s) 1063, 1152, 1200, 1805, 2141
BstHHI GCGC 2 cut(s) 158, 2810
BstKTI GATC 9 cut(s) 181, 792, 1036, 1199, 1297, 2062, 2209, 2386, 2530
BstMAI GTCTC 5 cut(s) 825, 1630, 1917, 2438, 2595
BstMBI GATC 9 cut(s) 178, 789, 1033, 1196, 1294, 2059, 2206, 2383, 2527
BstMCI CGRYCG 2 cut(s) 967, 2513
BstMWI GCNNNNNNNGC 3 cut(s) 1497, 1768, 2187
BstNI CCWGG 1 cut(s) 329
BstNSI RCATGY 3 cut(s) 689, 700, 1984
BstPI GGTNACC 2 cut(s) 533, 2326
BstSCI CCNGG 3 cut(s) 327, 1203, 1718
BstSFI CTRYAG 1 cut(s) 1911
BstV1I GCAGC 1 cut(s) 1335
BstV2I GAAGAC 1 cut(s) 330
BstX2I RGATCY 4 cut(s) 178, 1196, 1294, 2383
BstXI CCANNNNNNTGG 2 cut(s) 1524, 1957
BstYI RGATCY 4 cut(s) 178, 1196, 1294, 2383
Bsu15I ATCGAT 1 cut(s) 186
Bsu36I CCTNAGG 3 cut(s) 1001, 1141, 2048
BsuI GTATCC 2 cut(s) 1973, 2125
BsuRI GGCC 5 cut(s) 120, 875, 957, 1723, 2027
BsuTUI ATCGAT 1 cut(s) 186
BtgI CCRYGG 1 cut(s) 1651
BtsCI GGATG 5 cut(s) 1063, 1152, 1200, 1805, 2141
BtsI GCAGTG 1 cut(s) 2817
BtsIMutI CAGTG 4 cut(s) 261, 1319, 1908, 2817
BveI ACCTGC 1 cut(s) 1353
Cac8I GCNNGC 1 cut(s) 1134
CfoI GCGC 2 cut(s) 158, 2810
Cfr13I GGNCC 6 cut(s) 283, 655, 893, 1005, 1433, 1721
ClaI ATCGAT 1 cut(s) 186
Csp6I GTAC 2 cut(s) 1165, 2232
CviQI GTAC 2 cut(s) 1165, 2232
DpnI GATC 9 cut(s) 180, 791, 1035, 1198, 1296, 2061, 2208, 2385, 2529
DpnII GATC 9 cut(s) 178, 789, 1033, 1196, 1294, 2059, 2206, 2383, 2527
DraI TTTAAA 2 cut(s) 172, 2715
DraIII CACNNNGTG 1 cut(s) 2699
EaeI YGGCCR 1 cut(s) 873
Eam1104I CTCTTC 4 cut(s) 85, 1181, 2332, 2441
EarI CTCTTC 4 cut(s) 85, 1181, 2332, 2441
Ecl136II GAGCTC 1 cut(s) 420
Eco130I CCWWGG 4 cut(s) 449, 2028, 2118, 2759
Eco24I GRGCYC 1 cut(s) 422
Eco32I GATATC 1 cut(s) 910
Eco47I GGWCC 5 cut(s) 283, 655, 893, 1005, 1433
Eco53kI GAGCTC 1 cut(s) 420
Eco57I CTGAAG 2 cut(s) 342, 1299
Eco81I CCTNAGG 3 cut(s) 1001, 1141, 2048
Eco91I GGTNACC 2 cut(s) 533, 2326
EcoICRI GAGCTC 1 cut(s) 420
EcoO109I RGGNCCY 2 cut(s) 1005, 1433
EcoO65I GGTNACC 2 cut(s) 533, 2326
EcoRI GAATTC 6 cut(s) 880, 969, 2342, 2519, 2556, 2628
EcoRII CCWGG 1 cut(s) 327
EcoRV GATATC 1 cut(s) 910
EcoT14I CCWWGG 4 cut(s) 449, 2028, 2118, 2759
EcoT22I ATGCAT 2 cut(s) 140, 1030
EcoT38I GRGCYC 1 cut(s) 422
ErhI CCWWGG 4 cut(s) 449, 2028, 2118, 2759
FalI AAGNNNNNCTT 6 cut(s) 165, 197, 642, 674, 2617, 2649
FaqI GGGAC 4 cut(s) 525, 879, 1230, 2565
FauI CCCGC 1 cut(s) 1671
FbaI TGATCA 1 cut(s) 1033
Fnu4HI GCNGC 1 cut(s) 1349
FokI GGATG 5 cut(s) 1070, 1159, 1187, 1792, 2128
FriOI GRGCYC 1 cut(s) 422
Fsp4HI GCNGC 1 cut(s) 1349
GlaI GCGC 2 cut(s) 157, 2809
GluI GCNGC 1 cut(s) 1349
GsaI CCCAGC 1 cut(s) 2173
GsuI CTGGAG 1 cut(s) 1887
HaeIII GGCC 5 cut(s) 120, 875, 957, 1723, 2027
HapII CCGG 2 cut(s) 1205, 1719
HhaI GCGC 2 cut(s) 158, 2810
Hin6I GCGC 2 cut(s) 156, 2808
HinP1I GCGC 2 cut(s) 156, 2808
HincII GTYRAC 4 cut(s) 694, 916, 1734, 2539
HindII GTYRAC 4 cut(s) 694, 916, 1734, 2539
HindIII AAGCTT 2 cut(s) 1397, 1589
HpaI GTTAAC 3 cut(s) 694, 916, 1734
HpaII CCGG 2 cut(s) 1205, 1719
HphI GGTGA 5 cut(s) 1910, 2024, 2189, 2338, 2420
Hpy166II GTNNAC 8 cut(s) 101, 655, 694, 916, 1734, 1973, 2159, 2539
Hpy188I TCNGA 4 cut(s) 645, 860, 1228, 1507
Hpy8I GTNNAC 8 cut(s) 101, 655, 694, 916, 1734, 1973, 2159, 2539
HpyAV CCTTC 9 cut(s) 131, 387, 714, 758, 968, 1362, 2103, 2204, 2399
HpyCH4III ACNGT 3 cut(s) 965, 1424, 1912
HpyCH4IV ACGT 1 cut(s) 2802
HpyF10VI GCNNNNNNNGC 3 cut(s) 1497, 1768, 2187
HpySE526I ACGT 1 cut(s) 2802
HspAI GCGC 2 cut(s) 156, 2808
Ksp22I TGATCA 1 cut(s) 1033
KspAI GTTAAC 3 cut(s) 694, 916, 1734
Kzo9I GATC 9 cut(s) 178, 789, 1033, 1196, 1294, 2059, 2206, 2383, 2527
LmnI GCTCC 3 cut(s) 310, 671, 1155
Lsp1109I GCAGC 1 cut(s) 1335
LweI GCATC 8 cut(s) 147, 178, 307, 722, 1137, 1509, 1780, 2913
MaeII ACGT 1 cut(s) 2802
MalI GATC 9 cut(s) 180, 791, 1035, 1198, 1296, 2061, 2208, 2385, 2529
MbiI CCGCTC 1 cut(s) 2622
MboI GATC 9 cut(s) 178, 789, 1033, 1196, 1294, 2059, 2206, 2383, 2527
MfeI CAATTG 1 cut(s) 2174
MflI RGATCY 4 cut(s) 178, 1196, 1294, 2383
MhlI GDGCHC 2 cut(s) 422, 2726
MlsI TGGCCA 1 cut(s) 875
MluNI TGGCCA 1 cut(s) 875
MlyI GAGTC 5 cut(s) 359, 1100, 1215, 1618, 2353
MmeI TCCRAC 4 cut(s) 315, 1068, 1624, 1900
Mox20I TGGCCA 1 cut(s) 875
Mph1103I ATGCAT 2 cut(s) 140, 1030
MroXI GAANNNNTTC 2 cut(s) 747, 884
MscI TGGCCA 1 cut(s) 875
MslI CAYNNNNRTG 5 cut(s) 1191, 1776, 2307, 2475, 2778
Msp20I TGGCCA 1 cut(s) 875
MspA1I CMGCKG 1 cut(s) 891
MspI CCGG 2 cut(s) 1205, 1719
MspR9I CCNGG 3 cut(s) 329, 1205, 1720
MunI CAATTG 1 cut(s) 2174
MvaI CCWGG 1 cut(s) 329
MwoI GCNNNNNNNGC 3 cut(s) 1497, 1768, 2187
NciI CCSGG 2 cut(s) 1205, 1720
NdeII GATC 9 cut(s) 178, 789, 1033, 1196, 1294, 2059, 2206, 2383, 2527
NlaIV GGNNCC 5 cut(s) 673, 895, 1198, 1386, 2706
NmuCI GTSAC 5 cut(s) 1092, 1480, 1621, 1898, 2326
NsiI ATGCAT 2 cut(s) 140, 1030
NspI RCATGY 3 cut(s) 689, 700, 1984
PciI ACATGT 2 cut(s) 685, 1980
PdmI GAANNNNTTC 2 cut(s) 747, 884
PfeI GAWTC 5 cut(s) 517, 1508, 1801, 2467, 2663
PflMI CCANNNNNTGG 2 cut(s) 334, 1558
PfoI TCCNGGA 1 cut(s) 1203
PkrI GCNGC 1 cut(s) 1350
PleI GAGTC 5 cut(s) 358, 1099, 1215, 1618, 2353
PpsI GAGTC 5 cut(s) 358, 1099, 1215, 1618, 2353
PpuMI RGGWCCY 2 cut(s) 1005, 1433
PscI ACATGT 2 cut(s) 685, 1980
Psp124BI GAGCTC 1 cut(s) 422
Psp5II RGGWCCY 2 cut(s) 1005, 1433
Psp6I CCWGG 1 cut(s) 327
PspEI GGTNACC 2 cut(s) 533, 2326
PspFI CCCAGC 1 cut(s) 2169
PspGI CCWGG 1 cut(s) 327
PspN4I GGNNCC 5 cut(s) 673, 895, 1198, 1386, 2706
PspPI GGNCC 6 cut(s) 283, 655, 893, 1005, 1433, 1721
PspPPI RGGWCCY 2 cut(s) 1005, 1433
PsrI GAACNNNNNNTAC 2 cut(s) 1954, 1986
PsuI RGATCY 4 cut(s) 178, 1196, 1294, 2383
RsaI GTAC 2 cut(s) 1166, 2233
RsaNI GTAC 2 cut(s) 1165, 2232
RseI CAYNNNNRTG 5 cut(s) 1191, 1776, 2307, 2475, 2778
SacI GAGCTC 1 cut(s) 422
SatI GCNGC 1 cut(s) 1349
Sau3AI GATC 9 cut(s) 178, 789, 1033, 1196, 1294, 2059, 2206, 2383, 2527
Sau96I GGNCC 6 cut(s) 283, 655, 893, 1005, 1433, 1721
SchI GAGTC 5 cut(s) 359, 1100, 1215, 1618, 2353
ScrFI CCNGG 3 cut(s) 329, 1205, 1720
SduI GDGCHC 2 cut(s) 422, 2726
SfaNI GCATC 8 cut(s) 147, 178, 307, 722, 1137, 1509, 1780, 2913
SfcI CTRYAG 1 cut(s) 1911
SinI GGWCC 5 cut(s) 283, 655, 893, 1005, 1433
SmiMI CAYNNNNRTG 5 cut(s) 1191, 1776, 2307, 2475, 2778
SmlI CTYRAG 2 cut(s) 415, 1878
SmoI CTYRAG 2 cut(s) 415, 1878
SpeI ACTAGT 2 cut(s) 95, 1471
SsiI CCGC 6 cut(s) 567, 891, 1664, 2509, 2622, 2921
SspI AATATT 5 cut(s) 46, 1556, 1945, 2485, 2674
SstI GAGCTC 1 cut(s) 422
StyD4I CCNGG 3 cut(s) 327, 1203, 1718
StyI CCWWGG 4 cut(s) 449, 2028, 2118, 2759
TaaI ACNGT 3 cut(s) 965, 1424, 1912
TaiI ACGT 1 cut(s) 2805
TfiI GAWTC 5 cut(s) 517, 1508, 1801, 2467, 2663
TscAI CASTG 4 cut(s) 268, 1326, 1915, 2817
TseFI GTSAC 5 cut(s) 1092, 1480, 1621, 1898, 2326
TseI GCWGC 1 cut(s) 1348
Tsp45I GTSAC 5 cut(s) 1092, 1480, 1621, 1898, 2326
TspGWI ACGGA 1 cut(s) 1719
TspRI CASTG 4 cut(s) 268, 1326, 1915, 2817
Van91I CCANNNNNTGG 2 cut(s) 334, 1558
VpaK11BI GGWCC 5 cut(s) 283, 655, 893, 1005, 1433
XbaI TCTAGA 3 cut(s) 728, 1240, 1627
XceI RCATGY 3 cut(s) 689, 700, 1984
XcmI CCANNNNNNNNNTGG 1 cut(s) 831
XmaJI CCTAGG 2 cut(s) 449, 2759
XmnI GAANNNNTTC 2 cut(s) 747, 884
Zsp2I ATGCAT 2 cut(s) 140, 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.