RchiOBHm_Chr1g0315621

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
2678539 .. 2681391
2853 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54613

Sequence Viewer

Length: 2808 bp
ATGGATATCTATGTTTACTTTAACCCTATCTCTCGCCTCATTCTTCACTTCTTGGTCTTGTTATTTTTGGCATCTTCGTGCCTAAACAATAGCAGTGTCGTGGTGGAATCATGCATGGAGGAAGAGAGGCGAGCACTTCTCAGCTTTAAACAAGATCTCAGTGATCCTTCTGGTAAGCTTTCTTCTTGGGCTGGTCACGAATGCTGCCAATGGACAGGGATTTCATGCAACAACCGCACTGGTCATGTTGCAACGTGGAACACCGCGGAGTATCTTCAATCTTGTTTGGGGGGTAAGTTGATTAATCCTTCTTTGCTTGACTTGAAAAATTTGAGTTACTTAGACTTGAGCTCGAATGATTTTCAAGGGACTCACATTCCCAAGTTTATTGGGGAGCTTACAAGTCTGAAATTTCTCAATTTTTCAAGTATCCGGCCTTTGAATTCAGTTGTGGGAGAGATTCCTTCTTCTCTTGGTAACCTCTCAAACTTGAACTATCTTGACCTCGGTTCTAGTTATTATCTTTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTGGAGGTGTGAACCTTAGCAGCACAGGAGTTAGTTGGCTACATGAGGTTAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTAGTTGCTACATTGGTGGAAACCAGCTTCCACTCTCCATGCCTACAATTAACTTCACATCACTTTTGGTCCTTGATATGTCATTTAATTTTATTAATTTTTCATATCCTAAATGGATGTTTAATCTTACTAGCCTTACAAAAGTTGATCTAAGTGGGAATTCTTTCAGTGGCCCCTTTCTTGATGAATTTGTAAGACTCAAATCTCTAGAACACCTTGACTTACAAAATGTAGGACTCAAAGGTCAATTTCCCAAATTTAGTGAAAATTTGTGCAGGCTCAAGTCATTAAGTCTGGCATGGAATCAAATTGATGGGGGAATTGAAGAGTTTTTGAGGGGTTTCTCAAATTGTTCATTTAATAGAATGGAGTCACTAGATCTGCATGACTGTGGGCTGGTAGGCAAATTGCCTAGTTCATTGGGAATGCTGAGAAGCCTGCAGCATCTCTATCTCAGCTCCAACTCTTTTTGGGGATCCATTCCAGAATTTATTATCAGCAATTTATCATCATCCCTGAAGACACTTGATCTCAGGAATAATATTTTCAACGGTTCCATTCCTCAAAGTTTGGGAAAACTTTCTCAGCTAGTGAGCCTTTATCTATCTTATAATTCATGGGAAGGCAATTTAACCAAAGCCCATTTCATAAATCTCACAAAATTAGAGTCTTTTGCAGTTAGCACAGCCCAACCTGTGCCCATCATTTTCAATTTGATTGATTATGAATGGATTCCTCCTTTCAAGCTCCACCGCATTGAAATGCACAACTGCCGAGTAGGCCCCGGCTTCCCTGTATGGCTTCAATCTCAAACTGAGCTCGTGTGGGTCTCACTTGAGAAGGCTGGACTCTCGGGTCCAATACCAGAGGAATGGCTCTTTAAGATATCTCCCCAAATCCACTGGTTGGATTTATCTTACAATCAAATAAGTGGAAAGCTTCCGTTCCGATTCAACTCTTTTCCGAATCTGGGTTCCATAGTTTTGAGCCATAATCAATTTGATGGCACTATTCCATCATCTATTTGTAGCATTCAATCTCTATATGACCTTGCTCTGAATAACAATCAGTTATCTGGAGAATTCCCTAAAGAATGGAGTTTGTGGAGCCGCATAGACACTGTGGATGTCTCAAACAACAATATGTCTGGTAATATTCCAAGCTCAATGGGCATTCCAAGTTCTCTTGGAATACTAAAGACAGACAACAATCATTTTAGCGGAGAAATTCCTTCTGCCTTGCAAAATTGCTCTGGTTTGCAGAGACTTTATCTTGGAGCCAACAAATTTACTGGAAGCATACCTTCTTGGATAGGATCAAAAGTATCCACATTCACAGTGCTGCAATTGCAATCAAACTCTTTAAGTGGACATATTCCTCATCATTTGTGCAGTCTTCCTTTCCTTCAGATCCTAGACCTTAGTCACAATAGAATTTCAGGGACTATTCCCAACTGTTTGAATAAATTGACTTCTTTAATCTCTAGTAGTGATGAGGGTTGGATCGTCTCTGGTGATTTTGAGGTAATAACTGTGACTGTAAAAGGAAGAGCAAGTGAATACTTCTCTGGCAATGAGATGCTTCTAACCATTATTGATTTTTCGCATAATGATTTAGAAGGTGAAATTCCTGAAGAAATTAGCAGTCTCGTTCGATTAGCTACATTAAACTTGTCCGTTAATCAATTAAGTGGAAATATCCCCTCAAAAATTGGAAACTTGCACTTGCTTGAAACACTTGACCTCTCCCAGAACCAGCTTTCAGGACAGATTCCACAAAGTCTCGCTTCTTTGACCTTCTTATCTCACCTGAACTTGTCTTGCAACAACTTGACCGGAAGAATTCCTTCGGGCAACCAACTTCAGACGCTTGATGATTCATCTATTTATGAGGGCAATCCTTCACTCTGTGGATTTCCTCTTTCAAATTGCACAGAAGTTGGAGGCAACATGCATGAGACTCATGAAGCTGATGATGAAAAGCTTGGTTTATATACCAGCGCAGTGCTTGGCTTTATCATAGGCTTTTGGAGTGTTTGTGGCACATTGATATTGAAGAAGTCATGGAGGTATGCTTATTTTCAAGTTTTTGACCACATCAAAGAGAAAGTAGCACTAGCAATTGCATTGAAAGTAGCTCGTTGA

Protein Analysis

935

Amino Acids

103.68

Weight (kDa)

5.8

Isoelectric Point (pI)

40.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 77 2e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 167 - 318 6.8e-07 Leucine-rich repeat region
LRR_14 PF23598 343 - 492 3.2e-11 Leucine-rich repeat region
LRR_8 PF13855 366 - 426 7.8e-06 Leucine rich repeat
LRR_8 PF13855 640 - 700 1.1e-06 Leucine rich repeat
LRR_14 PF23598 759 - 850 4e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1275
AasI GACNNNNNNGTC 2 cut(s) 906, 1518
AccB7I CCANNNNNTGG 1 cut(s) 1570
AccII CGCG 1 cut(s) 266
AciI CCGC 6 cut(s) 235, 264, 266, 1417, 1774, 1884
AclWI GGATC 6 cut(s) 158, 1134, 1147, 1987, 2068, 2174
AcuI CTGAAG 4 cut(s) 1202, 2054, 2316, 2510
AdeI CACNNNGTG 1 cut(s) 2573
AfiI CCNNNNNNNGG 2 cut(s) 1570, 1634
AjuI GAANNNNNNNTTGG 2 cut(s) 1292, 1324
Alw21I GWGCWC 3 cut(s) 136, 353, 1485
Alw26I GTCTC 7 cut(s) 1498, 1798, 1921, 2176, 2315, 2450, 2615
AlwI GGATC 6 cut(s) 158, 1134, 1147, 1987, 2068, 2174
Ama87I CYCGRG 1 cut(s) 1516
AoxI GGCC 3 cut(s) 434, 835, 1444
ApeKI GCWGC 4 cut(s) 204, 600, 1105, 2005
ArsI GACNNNNNNTTYG 2 cut(s) 1316, 1348
AseI ATTAAT 2 cut(s) 303, 759
Asp700I GAANNNNTTC 4 cut(s) 827, 1243, 1395, 2509
AspLEI GCGC 1 cut(s) 2666
AspS9I GGNCC 4 cut(s) 733, 836, 1445, 1520
AsuC2I CCSGG 1 cut(s) 1449
AsuHPI GGTGA 3 cut(s) 2189, 2297, 2462
AvaI CYCGRG 1 cut(s) 1516
AvaII GGWCC 2 cut(s) 733, 1520
BaeGI GKGCMC 1 cut(s) 1365
BamHI GGATCC 1 cut(s) 1139
BanII GRGCYC 2 cut(s) 353, 1485
BarI GAAGNNNNNNTAC 2 cut(s) 166, 198
BauI CACGAG 1 cut(s) 1484
BbsI GAAGAC 2 cut(s) 1190, 2051
Bbv12I GWGCWC 3 cut(s) 136, 353, 1485
BbvI GCAGC 4 cut(s) 191, 612, 1117, 1992
BccI CCATC 4 cut(s) 971, 1373, 1661, 1687
BciVI GTATCC 2 cut(s) 440, 1999
BcnI CCSGG 1 cut(s) 1449
BcoDI GTCTC 7 cut(s) 1498, 1798, 1921, 2176, 2315, 2450, 2615
BfmI CTRYAG 1 cut(s) 1103
BfuI GTATCC 2 cut(s) 440, 1999
BglI GCCNNNNNGGC 1 cut(s) 1443
BglII AGATCT 2 cut(s) 154, 1042
BisI GCNGC 5 cut(s) 205, 601, 1106, 1774, 2006
BlsI GCNGC 5 cut(s) 206, 602, 1107, 1775, 2007
Bme1390I CCNGG 1 cut(s) 1449
Bme18I GGWCC 2 cut(s) 733, 1520
BmeT110I CYCGRG 1 cut(s) 1516
BmgT120I GGNCC 4 cut(s) 733, 836, 1445, 1520
BmiI GGNNCC 8 cut(s) 838, 1141, 1219, 1447, 1521, 1639, 1772, 1942
BmrFI CCNGG 1 cut(s) 1449
BmsI GCATC 3 cut(s) 80, 1117, 2232
BoxI GACNNNNGTC 1 cut(s) 2085
BpiI GAAGAC 2 cut(s) 1190, 2051
BplI GAGNNNNNCTC 2 cut(s) 123, 155
BpmI CTGGAG 1 cut(s) 1761
Bpu10I CCTNAGC 1 cut(s) 596
BpuEI CTTGAG 3 cut(s) 367, 929, 1520
BpuMI CCSGG 1 cut(s) 1449
BsaI GGTCTC 1 cut(s) 1498
BsaJI CCNNGG 3 cut(s) 264, 505, 1447
BsaWI WCCGGW 1 cut(s) 2498
BsaXI ACNNNNNCTCC 2 cut(s) 2686, 2716
Bsc4I CCNNNNNNNGG 2 cut(s) 1570, 1634
Bse1I ACTGG 3 cut(s) 244, 1571, 1960
Bse3DI GCAATG 1 cut(s) 2242
BseDI CCNNGG 3 cut(s) 264, 505, 1447
BseGI GGATG 3 cut(s) 786, 1175, 1795
BseLI CCNNNNNNNGG 2 cut(s) 1570, 1634
BseMI GCAATG 1 cut(s) 2242
BseMII CTCAG 7 cut(s) 154, 172, 1085, 1132, 1210, 1262, 1470
BseNI ACTGG 3 cut(s) 244, 1571, 1960
BseSI GKGCMC 1 cut(s) 1365
BseXI GCAGC 4 cut(s) 191, 612, 1117, 1992
BsgI GTGCAG 2 cut(s) 958, 2074
Bsh1236I CGCG 1 cut(s) 266
BshFI GGCC 3 cut(s) 436, 837, 1446
BsiHKAI GWGCWC 3 cut(s) 136, 353, 1485
BsiHKCI CYCGRG 1 cut(s) 1516
BsiSI CCGG 3 cut(s) 433, 1449, 2499
BslFI GGGAC 2 cut(s) 382, 2119
BslI CCNNNNNNNGG 2 cut(s) 1570, 1634
BsmAI GTCTC 7 cut(s) 1498, 1798, 1921, 2176, 2315, 2450, 2615
BsmBI CGTCTC 1 cut(s) 2176
BsmFI GGGAC 2 cut(s) 382, 2119
BsmI GAATGC 4 cut(s) 206, 1095, 1695, 1836
BsnI GGCC 3 cut(s) 436, 837, 1446
Bso31I GGTCTC 1 cut(s) 1498
BsoBI CYCGRG 1 cut(s) 1516
Bsp1286I GDGCHC 4 cut(s) 136, 353, 1365, 1485
Bsp143I GATC 9 cut(s) 154, 163, 811, 1042, 1139, 1192, 1979, 2073, 2166
BspACI CCGC 6 cut(s) 235, 264, 266, 1417, 1774, 1884
BspANI GGCC 3 cut(s) 436, 837, 1446
BspCNI CTCAG 7 cut(s) 153, 171, 1086, 1131, 1209, 1261, 1471
BspFNI CGCG 1 cut(s) 266
BspHI TCATGA 1 cut(s) 2626
BspLI GGNNCC 8 cut(s) 838, 1141, 1219, 1447, 1521, 1639, 1772, 1942
BspMAI CTGCAG 1 cut(s) 1107
BspPI GGATC 6 cut(s) 158, 1134, 1147, 1987, 2068, 2174
BspQI GCTCTTC 1 cut(s) 2206
BspTNI GGTCTC 1 cut(s) 1498
BsrDI GCAATG 1 cut(s) 2242
BsrI ACTGG 3 cut(s) 244, 1571, 1960
BssECI CCNNGG 3 cut(s) 264, 505, 1447
BssMI GATC 9 cut(s) 154, 163, 811, 1042, 1139, 1192, 1979, 2073, 2166
BssSI CACGAG 1 cut(s) 1484
Bst2BI CACGAG 1 cut(s) 1484
Bst4CI ACNGT 7 cut(s) 1055, 1217, 1786, 2002, 2120, 2197, 2203
Bst6I CTCTTC 4 cut(s) 117, 565, 984, 2206
BstC8I GCNNGC 3 cut(s) 132, 941, 1103
BstDSI CCRYGG 1 cut(s) 264
BstEII GGTNACC 1 cut(s) 476
BstF5I GGATG 3 cut(s) 786, 1175, 1795
BstFNI CGCG 1 cut(s) 266
BstHHI GCGC 1 cut(s) 2666
BstKTI GATC 9 cut(s) 157, 166, 814, 1045, 1142, 1195, 1982, 2076, 2169
BstMAI GTCTC 7 cut(s) 1498, 1798, 1921, 2176, 2315, 2450, 2615
BstMBI GATC 9 cut(s) 154, 163, 811, 1042, 1139, 1192, 1979, 2073, 2166
BstMWI GCNNNNNNNGC 4 cut(s) 234, 1443, 1833, 2011
BstNSI RCATGY 2 cut(s) 637, 2617
BstPAI GACNNNNGTC 1 cut(s) 2085
BstPI GGTNACC 1 cut(s) 476
BstSCI CCNGG 1 cut(s) 1447
BstSFI CTRYAG 1 cut(s) 1103
BstSLI GKGCMC 1 cut(s) 1365
BstUI CGCG 1 cut(s) 266
BstV1I GCAGC 4 cut(s) 191, 612, 1117, 1992
BstV2I GAAGAC 2 cut(s) 1190, 2051
BstX2I RGATCY 4 cut(s) 154, 1042, 1139, 2073
BstXI CCANNNNNNTGG 1 cut(s) 1536
BstYI RGATCY 4 cut(s) 154, 1042, 1139, 2073
BsuI GTATCC 2 cut(s) 440, 1999
BsuRI GGCC 3 cut(s) 436, 837, 1446
BtgI CCRYGG 1 cut(s) 264
BtsCI GGATG 3 cut(s) 786, 1175, 1795
BtsI GCAGTG 2 cut(s) 100, 2673
BtsIMutI CAGTG 8 cut(s) 100, 166, 237, 838, 1564, 1782, 2007, 2673
Cac8I GCNNGC 3 cut(s) 132, 941, 1103
CciI TCATGA 1 cut(s) 2626
CfoI GCGC 1 cut(s) 2666
Cfr13I GGNCC 4 cut(s) 733, 836, 1445, 1520
Cfr42I CCGCGG 1 cut(s) 267
CseI GACGC 1 cut(s) 2539
DpnI GATC 9 cut(s) 156, 165, 813, 1044, 1141, 1194, 1981, 2075, 2168
DpnII GATC 9 cut(s) 154, 163, 811, 1042, 1139, 1192, 1979, 2073, 2166
DraI TTTAAA 1 cut(s) 148
DraIII CACNNNGTG 1 cut(s) 2573
DrdI GACNNNNNNGTC 2 cut(s) 906, 1518
DseDI GACNNNNNNGTC 2 cut(s) 906, 1518
Eam1104I CTCTTC 4 cut(s) 117, 565, 984, 2206
EarI CTCTTC 4 cut(s) 117, 565, 984, 2206
Ecl136II GAGCTC 2 cut(s) 351, 1483
Eco24I GRGCYC 2 cut(s) 353, 1485
Eco31I GGTCTC 1 cut(s) 1498
Eco32I GATATC 2 cut(s) 7, 1551
Eco47I GGWCC 2 cut(s) 733, 1520
Eco53kI GAGCTC 2 cut(s) 351, 1483
Eco57I CTGAAG 4 cut(s) 1202, 2054, 2316, 2510
Eco88I CYCGRG 1 cut(s) 1516
Eco91I GGTNACC 1 cut(s) 476
EcoICRI GAGCTC 2 cut(s) 351, 1483
EcoO109I RGGNCCY 1 cut(s) 1445
EcoO65I GGTNACC 1 cut(s) 476
EcoRI GAATTC 4 cut(s) 442, 823, 1745, 2505
EcoRV GATATC 2 cut(s) 7, 1551
EcoT22I ATGCAT 2 cut(s) 116, 2619
EcoT38I GRGCYC 2 cut(s) 353, 1485
Esp3I CGTCTC 1 cut(s) 2176
FalI AAGNNNNNCTT 6 cut(s) 1951, 1983, 2434, 2466, 2494, 2526
FaqI GGGAC 2 cut(s) 382, 2119
Fnu4HI GCNGC 5 cut(s) 205, 601, 1106, 1774, 2006
FokI GGATG 3 cut(s) 793, 1162, 1802
FriOI GRGCYC 2 cut(s) 353, 1485
Fsp4HI GCNGC 5 cut(s) 205, 601, 1106, 1774, 2006
GlaI GCGC 1 cut(s) 2665
GluI GCNGC 5 cut(s) 205, 601, 1106, 1774, 2006
GsuI CTGGAG 1 cut(s) 1761
HaeIII GGCC 3 cut(s) 436, 837, 1446
HapII CCGG 3 cut(s) 433, 1449, 2499
HgaI GACGC 1 cut(s) 2539
HhaI GCGC 1 cut(s) 2666
Hin6I GCGC 1 cut(s) 2664
HinP1I GCGC 1 cut(s) 2664
HincII GTYRAC 1 cut(s) 631
HindII GTYRAC 1 cut(s) 631
HindIII AAGCTT 3 cut(s) 176, 1601, 2645
HpaI GTTAAC 1 cut(s) 631
HpaII CCGG 3 cut(s) 433, 1449, 2499
HphI GGTGA 3 cut(s) 2189, 2297, 2462
Hpy166II GTNNAC 4 cut(s) 16, 592, 631, 2033
Hpy188I TCNGA 6 cut(s) 408, 1613, 1629, 1722, 2073, 2529
Hpy8I GTNNAC 4 cut(s) 16, 592, 631, 2033
HpyCH4III ACNGT 7 cut(s) 1055, 1217, 1786, 2002, 2120, 2197, 2203
HpyCH4IV ACGT 1 cut(s) 254
HpyF10VI GCNNNNNNNGC 4 cut(s) 234, 1443, 1833, 2011
HpySE526I ACGT 1 cut(s) 254
HspAI GCGC 1 cut(s) 2664
KspAI GTTAAC 1 cut(s) 631
KspI CCGCGG 1 cut(s) 267
Kzo9I GATC 9 cut(s) 154, 163, 811, 1042, 1139, 1192, 1979, 2073, 2166
LguI GCTCTTC 1 cut(s) 2206
LmnI GCTCC 5 cut(s) 394, 1127, 1416, 1770, 1940
Lsp1109I GCAGC 4 cut(s) 191, 612, 1117, 1992
LweI GCATC 3 cut(s) 80, 1117, 2232
MaeII ACGT 1 cut(s) 254
MaeIII GTNAC 6 cut(s) 194, 335, 476, 1035, 2087, 2197
MalI GATC 9 cut(s) 156, 165, 813, 1044, 1141, 1194, 1981, 2075, 2168
MboI GATC 9 cut(s) 154, 163, 811, 1042, 1139, 1192, 1979, 2073, 2166
MfeI CAATTG 2 cut(s) 2009, 2784
MflI RGATCY 4 cut(s) 154, 1042, 1139, 2073
MhlI GDGCHC 4 cut(s) 136, 353, 1365, 1485
MlyI GAGTC 7 cut(s) 364, 855, 894, 1043, 1340, 1506, 2617
MmeI TCCRAC 4 cut(s) 1149, 1551, 2144, 2584
Mph1103I ATGCAT 2 cut(s) 116, 2619
MroXI GAANNNNTTC 4 cut(s) 827, 1243, 1395, 2509
MslI CAYNNNNRTG 3 cut(s) 76, 1053, 1424
MspA1I CMGCKG 1 cut(s) 266
MspI CCGG 3 cut(s) 433, 1449, 2499
MspR9I CCNGG 1 cut(s) 1449
MunI CAATTG 2 cut(s) 2009, 2784
Mva1269I GAATGC 4 cut(s) 206, 1095, 1695, 1836
MvnI CGCG 1 cut(s) 266
MwoI GCNNNNNNNGC 4 cut(s) 234, 1443, 1833, 2011
NciI CCSGG 1 cut(s) 1449
NdeII GATC 9 cut(s) 154, 163, 811, 1042, 1139, 1192, 1979, 2073, 2166
NlaIV GGNNCC 8 cut(s) 838, 1141, 1219, 1447, 1521, 1639, 1772, 1942
NmeAIII GCCGAG 1 cut(s) 1463
NmuCI GTSAC 4 cut(s) 194, 1035, 2087, 2197
NsiI ATGCAT 2 cut(s) 116, 2619
NspI RCATGY 2 cut(s) 637, 2617
PagI TCATGA 1 cut(s) 2626
PciSI GCTCTTC 1 cut(s) 2206
PctI GAATGC 4 cut(s) 206, 1095, 1695, 1836
PdmI GAANNNNTTC 4 cut(s) 827, 1243, 1395, 2509
PfeI GAWTC 8 cut(s) 107, 460, 967, 1396, 1614, 1630, 2434, 2540
PflMI CCANNNNNTGG 1 cut(s) 1570
PkrI GCNGC 5 cut(s) 206, 602, 1107, 1775, 2007
PleI GAGTC 7 cut(s) 364, 855, 894, 1042, 1339, 1506, 2617
PpsI GAGTC 7 cut(s) 364, 855, 894, 1042, 1339, 1506, 2617
PshAI GACNNNNGTC 1 cut(s) 2085
PshBI ATTAAT 2 cut(s) 303, 759
PsiI TTATAA 1 cut(s) 1275
Psp124BI GAGCTC 2 cut(s) 353, 1485
PspEI GGTNACC 1 cut(s) 476
PspN4I GGNNCC 8 cut(s) 838, 1141, 1219, 1447, 1521, 1639, 1772, 1942
PspPI GGNCC 4 cut(s) 733, 836, 1445, 1520
PstI CTGCAG 1 cut(s) 1107
PsuI RGATCY 4 cut(s) 154, 1042, 1139, 2073
RseI CAYNNNNRTG 3 cut(s) 76, 1053, 1424
SacI GAGCTC 2 cut(s) 353, 1485
SacII CCGCGG 1 cut(s) 267
SapI GCTCTTC 1 cut(s) 2206
SatI GCNGC 5 cut(s) 205, 601, 1106, 1774, 2006
Sau3AI GATC 9 cut(s) 154, 163, 811, 1042, 1139, 1192, 1979, 2073, 2166
Sau96I GGNCC 4 cut(s) 733, 836, 1445, 1520
SchI GAGTC 7 cut(s) 364, 855, 894, 1043, 1340, 1506, 2617
ScrFI CCNGG 1 cut(s) 1449
SduI GDGCHC 4 cut(s) 136, 353, 1365, 1485
SfaNI GCATC 3 cut(s) 80, 1117, 2232
SfcI CTRYAG 1 cut(s) 1103
Sfr303I CCGCGG 1 cut(s) 267
SgrBI CCGCGG 1 cut(s) 267
SinI GGWCC 2 cut(s) 733, 1520
SmiMI CAYNNNNRTG 3 cut(s) 76, 1053, 1424
SmlI CTYRAG 3 cut(s) 346, 944, 1499
SmoI CTYRAG 3 cut(s) 346, 944, 1499
SsiI CCGC 6 cut(s) 235, 264, 266, 1417, 1774, 1884
SspI AATATT 2 cut(s) 1207, 1819
SstI GAGCTC 2 cut(s) 353, 1485
StyD4I CCNGG 1 cut(s) 1447
TaaI ACNGT 7 cut(s) 1055, 1217, 1786, 2002, 2120, 2197, 2203
TaiI ACGT 1 cut(s) 257
TaqI TCGA 2 cut(s) 353, 2317
TauI GCSGC 1 cut(s) 1776
TfiI GAWTC 8 cut(s) 107, 460, 967, 1396, 1614, 1630, 2434, 2540
TscAI CASTG 8 cut(s) 100, 166, 244, 838, 1571, 1789, 2007, 2673
TseFI GTSAC 4 cut(s) 194, 1035, 2087, 2197
TseI GCWGC 4 cut(s) 204, 600, 1105, 2005
Tsp45I GTSAC 4 cut(s) 194, 1035, 2087, 2197
TspGWI ACGGA 2 cut(s) 1596, 2329
TspRI CASTG 8 cut(s) 100, 166, 244, 838, 1571, 1789, 2007, 2673
Van91I CCANNNNNTGG 1 cut(s) 1570
VpaK11BI GGWCC 2 cut(s) 733, 1520
VspI ATTAAT 2 cut(s) 303, 759
XbaI TCTAGA 1 cut(s) 871
XceI RCATGY 2 cut(s) 637, 2617
XmnI GAANNNNTTC 4 cut(s) 827, 1243, 1395, 2509
Zsp2I ATGCAT 2 cut(s) 116, 2619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.