RchiOBHm_Chr5g0041631

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
36546581 .. 36549780
3200 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32006

Sequence Viewer

Length: 3048 bp
ATGGATAGCTTCTATGCAAACTTATTCAAGCCTACCAGCTATCATCTCCTCAACATTATTGCTCACTACTTCCTGTTTCTTTTTCTGGCATCTGCATATCTGCAGACTGCTAAGCTCAGTTTGGGTGATGGACTTCCACACAGTGTGGGATCATCATGCATTCAACGAGAGAGAGGAGCACTTCTCAGCTTCAAACAAGATGTTACCGATCCTTCTGGCAGGCTCTCTTCCTGGGTGGGTCAGGATTGCTGTCGATGGAGGGGGATTTCATGCAACAACCGCACAGGTCACGTTGTGAAGATAGACCTCCGGAACTTGCACTGGTCGGTTGACAAAAGTACATGTTTGGGGGGTAAGATAAATTCTTCTTTGCTTGGTTTGAAACATTTATTTCACCTAGATCTAAGCTGGAATGATTTTCCACATATTCACATTCCCAAGTTCATTGGGCAGCTTACAAGTTTAAGGTATCTCAATCTCTCATTTACATCATTCGGGGGAGAGATTCCCCCTTCTCTTGGTAACCTATCAAACCTGAACTATCTTGACCTCAGTTCTGCGGTTGTTTCTTCCAAAAACTTCAATTGGCTTTCTTATCTCTCTTCCCTAAAATATCTAGATCTTGGATATTTGGATCTTGGTAGCTCAGCACTATCTTGGGTGCACGATGTTAAGATGCCACCTTTACTGTTAGAGTTATATTTGTCTGAATGCAATCTTGGTGAAAATGTTCCACACTCCCTGCCTTCAATGAACTTCACATCACTACTGGTTTTTGATATATCAAATAATTTTATCAATTCTTCATATCCCAGCTGGTTTTTTAATCTTACCAACCTCAAAAGACTTGATCTAGAGGGCAATTTTTTCAACGGTCCCTTCCCCGTTGAAATTGCAAACCTCAAGTCTCTGGAAGACCTGGGTTTAGGTAATGATGTTCTCCAAGGTCAAATTCCCAAAGTCATTGGGACTTTGTGCAGCCTAAGGATATTAGATCTTTCGTGGAACTCGTTGGATGGTGGCTTGGAAGAGGTTTTGAATGGTTTCTCAAACTGTACAAATTATAGTTTAGAGTCACTTGATTTGTCCAACAATCTGCTAGAAGGCGAATTGCCTGCTGCCCTGGGAATCCTAGAAAATCTGCAGGAACTTTACCTCTCTGTTAATCATTTTTCGGGTTCAATTCCAGAAACTTTTGGAAATTTGTCCTCCTTGAAATCACTGGACCTTACTTCCAATCAAATGAACGGGTCCATTCCTGAAAGTTTGGGGCAACTCAATCAGCTAGTTGACCTACATCTATCTTCTCGTTCGTGGGAAGGCACTTCAAATTCGTGGGAAGGCATTTTAACTGAAGCACATTTCCTACATCTCTCTAGGTTAAAGTCTTTCCAAGTAGGCACAGACCGACCTAGGTCCCTCATTTTTAACGTGGCTCATGAGTGGGTTCCTCCTTTCCAGCTTGACTCACTTTACATTGAGAACTGTACAGTAGGTCCTACCTTTGGGGTATGGCTTCAATCTCAAACTGAACTAGTGGAGGTCACCCTTCATAATACTGGAATAAGAGACACCATACCAGAGGAATGGTTCTTGAAGATGTCTTCTAAACTCACACGTTTGGATTTGTCTTACAACCAAATCCATGGAAAGCTTCCATTCATAATGAACTCTCCAAATTTGATGTATATAGATTTGAGTTATAATCAATTTGAAGGCTCTCTGCCACATTGGTCTAGTAATAATGCCTCCATCCTCGATCTTCGGAGCAATTTATTTTCCGGGCCAATTCCCTCAAATTATGATCAACTGTTGCCTACGTTGGACGAGTTGTACCTGTCTGAGAATCATTTGAATGGTACTATACCACCCTCTATGTGCAACATGAGACGTTTGTCAATTCTTGCATTAAGAAGCAATCAATTGTCTGGAGAATTCCCCCAAGCATGGAGTGTGTGGCCATATATGTTCGTTGTAGATGTCTCTAGCAACAATTTGTCTGGCAATATCCCTTCTTCAATGGGTGTTCCAAGCTCATTATTCATATTGAAGCTGAGCAACAATAATTTTGGGGGTAAAATTCCTTCTGCTCTATTCCAAAATTGCACTGATTTGAGGAGTATTGATCTTGGAGGCAATAGATTTACAGGAAGCATACCATTATGGAGAAGTTCAAACGTCTCATCTGGTTTATATAAGTTACAATTGCGATCAAACTCTTTAAGCGGACATATCCCACATAGATTGTGCTCACTTCCAGCCCTTCATATCATAGACCTTGGCCACAACAACTTTTCAGGGAGCATTCCCAAGTGTTTGTATAATTTGACAGCTTTGGCTTATGGTAATGACACTGGTGGCTCCTATATTTATAATTATCTTGAGAAGACCAGCTTGACGTTGAAGGGACAAGAACTCGTGTACAACACGACTCTGGCTTTGGTAAAAAGCATTGATTTCTCATCAAATAATTTAGAAGGTGTAATCCCTGATGGAATAAGCAACCTCATTGCCTTGGGTACGTTGAACTTGTCCAGAAATCAACTAAGTGGAAACATTCCTTCAAATATTGGAAACTTGCGATGGCTGGAAACTCTTGATCTCTCACACAATCAACTTTCAGGGCAGATTCCACATAGTCTCTCATCACTAACCTCATTGTCTCACTTGAACTTGTCTTTTAACTGCTTGACCGGAAGAATTCCTACAAGCACCCAACTCCAGACGCTCAATGATGCATCCATTTATGCGAGCAATCCATATCTGTGCGGATTTCCCCTTTTAATCAAGTGCTCGGGAGATAGCACACTTGCATCGACTAATCCTGGTGGTTATGAAACAGAAAATGAAGTTAAAGATGACAATGGAAAGCTTGGTTTCTATATTAGCATCATACTCGGCTTTATCCTAGGCTTTTGGGGTGTTTGTGGGACATTGCTTGTAAAACACTCATGGAGGTATGCCTATTTTCGATTCTTCGATGACATTAAAGATAAAGTAGCATTGGCTATTGCATTGAAGGTGGCTTATTTCCAAAGACGGTGTTGA

Protein Analysis

1015

Amino Acids

112.68

Weight (kDa)

5.9

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 56 - 92 2.5e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 123 - 208 6e-06 Leucine-rich repeat region
LRR_14 PF23598 252 - 346 1.9e-06 Leucine-rich repeat region
LRR_14 PF23598 356 - 509 2.7e-12 Leucine-rich repeat region
LRR_8 PF13855 380 - 436 5e-08 Leucine rich repeat
LRR_14 PF23598 827 - 916 1.1e-08 Leucine-rich repeat region
LRR_8 PF13855 858 - 895 9.9e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1704, 2373
AccIII TCCGGA 1 cut(s) 309
AciI CCGC 4 cut(s) 280, 560, 2226, 2769
AclWI GGATC 3 cut(s) 157, 203, 642
AcoI YGGCCR 2 cut(s) 1958, 2281
AcsI RAATTY 8 cut(s) 361, 951, 1201, 1330, 1678, 1934, 2079, 2700
AcuI CTGAAG 1 cut(s) 1374
AdeI CACNNNGTG 3 cut(s) 143, 145, 295
AfaI GTAC 7 cut(s) 340, 1057, 1489, 1835, 1861, 2423, 2521
AfiI CCNNNNNNNGG 3 cut(s) 518, 1505, 1947
AflIII ACRYGT 2 cut(s) 341, 1616
AhlI ACTAGT 1 cut(s) 1534
AjnI CCWGG 4 cut(s) 230, 918, 1122, 2824
AjuI GAANNNNNNNTTGG 4 cut(s) 702, 734, 936, 968
Alw21I GWGCWC 4 cut(s) 181, 666, 2252, 2795
Alw26I GTCTC 7 cut(s) 912, 1563, 1882, 1987, 2185, 2645, 2667
Alw44I GTGCAC 1 cut(s) 662
AlwI GGATC 3 cut(s) 157, 203, 642
Ama87I CYCGRG 1 cut(s) 2794
Aor13HI TCCGGA 1 cut(s) 309
AoxI GGCC 3 cut(s) 1784, 1958, 2281
ApaLI GTGCAC 1 cut(s) 662
ApeKI GCWGC 3 cut(s) 451, 978, 1118
ApoI RAATTY 8 cut(s) 361, 951, 1201, 1330, 1678, 1934, 2079, 2700
ArsI GACNNNNNNTTYG 4 cut(s) 890, 922, 2422, 2454
Asp700I GAANNNNTTC 2 cut(s) 729, 1043
AspA2I CCTAGG 2 cut(s) 1412, 2908
AspS9I GGNCC 6 cut(s) 875, 1225, 1251, 1416, 1496, 1784
AsuC2I CCSGG 1 cut(s) 1783
AsuHPI GGTGA 4 cut(s) 137, 386, 734, 1537
AvaI CYCGRG 1 cut(s) 2794
AvaII GGWCC 5 cut(s) 875, 1225, 1251, 1416, 1496
AvrII CCTAGG 2 cut(s) 1412, 2908
AxyI CCTNAGG 1 cut(s) 983
BaeGI GKGCMC 1 cut(s) 666
BalI TGGCCA 2 cut(s) 1960, 2283
BarI GAAGNNNNNNTAC 4 cut(s) 2068, 2100, 2689, 2721
BauI CACGAG 1 cut(s) 2417
BbsI GAAGAC 3 cut(s) 921, 1596, 2393
Bbv12I GWGCWC 4 cut(s) 181, 666, 2252, 2795
BbvI GCAGC 3 cut(s) 463, 990, 1105
BccI CCATC 6 cut(s) 122, 249, 1010, 1760, 2486, 2577
BcgI CGANNNNNNTGC 4 cut(s) 1097, 1131, 2878, 2912
BciT130I CCWGG 4 cut(s) 232, 920, 1124, 2826
BclI TGATCA 1 cut(s) 1804
BcnI CCSGG 1 cut(s) 1783
BcoDI GTCTC 7 cut(s) 912, 1563, 1882, 1987, 2185, 2645, 2667
BcuI ACTAGT 1 cut(s) 1534
BfmI CTRYAG 2 cut(s) 101, 1142
BglII AGATCT 3 cut(s) 400, 619, 994
BisI GCNGC 3 cut(s) 452, 979, 1119
BlnI CCTAGG 2 cut(s) 1412, 2908
BlpI GCTNAGC 3 cut(s) 111, 646, 2054
BlsI GCNGC 3 cut(s) 453, 980, 1120
Bme1390I CCNGG 5 cut(s) 232, 920, 1124, 1783, 2826
Bme18I GGWCC 5 cut(s) 875, 1225, 1251, 1416, 1496
BmeT110I CYCGRG 1 cut(s) 2794
BmgT120I GGNCC 6 cut(s) 875, 1225, 1251, 1416, 1496, 1784
BmiI GGNNCC 5 cut(s) 877, 1252, 1418, 1449, 2362
BmrFI CCNGG 5 cut(s) 232, 920, 1124, 1783, 2826
BmsI GCATC 6 cut(s) 98, 666, 2725, 2747, 2822, 2898
BoxI GACNNNNGTC 2 cut(s) 1414, 1894
BpiI GAAGAC 3 cut(s) 921, 1596, 2393
BplI GAGNNNNNCTC 2 cut(s) 168, 200
BpmI CTGGAG 2 cut(s) 1950, 2705
Bpu1102I GCTNAGC 3 cut(s) 111, 646, 2054
BpuEI CTTGAG 2 cut(s) 887, 2402
BpuMI CCSGG 1 cut(s) 1783
BsaWI WCCGGW 2 cut(s) 309, 2693
Bsc4I CCNNNNNNNGG 3 cut(s) 518, 1505, 1947
Bse1I ACTGG 5 cut(s) 326, 774, 1227, 1564, 2359
Bse21I CCTNAGG 1 cut(s) 983
Bse3DI GCAATG 2 cut(s) 2508, 2933
BseAI TCCGGA 1 cut(s) 309
BseBI CCWGG 4 cut(s) 232, 920, 1124, 2826
BseGI GGATG 3 cut(s) 1021, 1752, 2738
BseLI CCNNNNNNNGG 3 cut(s) 518, 1505, 1947
BseMI GCAATG 2 cut(s) 2508, 2933
BseMII CTCAG 6 cut(s) 130, 199, 565, 660, 1833, 2045
BseNI ACTGG 5 cut(s) 326, 774, 1227, 1564, 2359
BseRI GAGGAG 3 cut(s) 38, 189, 2131
BseSI GKGCMC 1 cut(s) 666
BseXI GCAGC 3 cut(s) 463, 990, 1105
BseYI CCCAGC 1 cut(s) 812
BsgI GTGCAG 1 cut(s) 997
BshFI GGCC 3 cut(s) 1786, 1960, 2283
BsiHKAI GWGCWC 4 cut(s) 181, 666, 2252, 2795
BsiHKCI CYCGRG 1 cut(s) 2794
BsiSI CCGG 3 cut(s) 310, 1782, 2694
BslFI GGGAC 5 cut(s) 861, 982, 1402, 2421, 2944
BslI CCNNNNNNNGG 3 cut(s) 518, 1505, 1947
BsmAI GTCTC 7 cut(s) 912, 1563, 1882, 1987, 2185, 2645, 2667
BsmBI CGTCTC 2 cut(s) 1882, 2185
BsmFI GGGAC 5 cut(s) 861, 982, 1402, 2421, 2944
BsmI GAATGC 3 cut(s) 159, 716, 2304
BsnI GGCC 3 cut(s) 1786, 1960, 2283
BsoBI CYCGRG 1 cut(s) 2794
Bsp1286I GDGCHC 4 cut(s) 181, 666, 2252, 2795
Bsp13I TCCGGA 1 cut(s) 309
Bsp1407I TGTACA 3 cut(s) 1055, 1487, 2421
Bsp1720I GCTNAGC 3 cut(s) 111, 646, 2054
Bsp19I CCATGG 1 cut(s) 1645
BspACI CCGC 4 cut(s) 280, 560, 2226, 2769
BspANI GGCC 3 cut(s) 1786, 1960, 2283
BspCNI CTCAG 6 cut(s) 129, 198, 564, 659, 1834, 2046
BspEI TCCGGA 1 cut(s) 309
BspHI TCATGA 1 cut(s) 1438
BspLI GGNNCC 5 cut(s) 877, 1252, 1418, 1449, 2362
BspMAI CTGCAG 2 cut(s) 105, 1146
BspPI GGATC 3 cut(s) 157, 203, 642
BsrDI GCAATG 2 cut(s) 2508, 2933
BsrGI TGTACA 3 cut(s) 1055, 1487, 2421
BsrI ACTGG 5 cut(s) 326, 774, 1227, 1564, 2359
BssSI CACGAG 1 cut(s) 2417
BssT1I CCWWGG 6 cut(s) 943, 1412, 1645, 2278, 2514, 2908
Bst2BI CACGAG 1 cut(s) 2417
Bst2UI CCWGG 4 cut(s) 232, 920, 1124, 2826
Bst4CI ACNGT 8 cut(s) 143, 690, 875, 1055, 1487, 1492, 1812, 3042
Bst6I CTCTTC 3 cut(s) 232, 607, 1023
BstAUI TGTACA 3 cut(s) 1055, 1487, 2421
BstC8I GCNNGC 3 cut(s) 221, 1116, 2752
BstDSI CCRYGG 1 cut(s) 1645
BstEII GGTNACC 2 cut(s) 521, 1543
BstF5I GGATG 3 cut(s) 1021, 1752, 2738
BstMAI GTCTC 7 cut(s) 912, 1563, 1882, 1987, 2185, 2645, 2667
BstMWI GCNNNNNNNGC 1 cut(s) 279
BstNI CCWGG 4 cut(s) 232, 920, 1124, 2826
BstNSI RCATGY 1 cut(s) 345
BstPAI GACNNNNGTC 2 cut(s) 1414, 1894
BstPI GGTNACC 2 cut(s) 521, 1543
BstSCI CCNGG 5 cut(s) 230, 918, 1122, 1781, 2824
BstSFI CTRYAG 2 cut(s) 101, 1142
BstSLI GKGCMC 1 cut(s) 666
BstV1I GCAGC 3 cut(s) 463, 990, 1105
BstV2I GAAGAC 3 cut(s) 921, 1596, 2393
BstX2I RGATCY 4 cut(s) 400, 619, 634, 994
BstXI CCANNNNNNTGG 2 cut(s) 1587, 1646
BstYI RGATCY 4 cut(s) 400, 619, 634, 994
Bsu36I CCTNAGG 1 cut(s) 983
BsuRI GGCC 3 cut(s) 1786, 1960, 2283
BtgI CCRYGG 1 cut(s) 1645
BtgZI GCGATG 1 cut(s) 2596
BtsCI GGATG 3 cut(s) 1021, 1752, 2738
BtsIMutI CAGTG 5 cut(s) 148, 319, 1220, 2106, 2352
Cac8I GCNNGC 3 cut(s) 221, 1116, 2752
CciI TCATGA 1 cut(s) 1438
Cfr13I GGNCC 6 cut(s) 875, 1225, 1251, 1416, 1496, 1784
CseI GACGC 1 cut(s) 2734
Csp6I GTAC 7 cut(s) 339, 1056, 1488, 1834, 1860, 2422, 2520
CspCI CAANNNNNGTGG 2 cut(s) 2226, 2261
CviAII CATG 8 cut(s) 156, 270, 342, 1439, 1646, 1885, 1947, 2952
CviQI GTAC 7 cut(s) 339, 1056, 1488, 1834, 1860, 2422, 2520
DraIII CACNNNGTG 3 cut(s) 143, 145, 295
EaeI YGGCCR 2 cut(s) 1958, 2281
Eam1104I CTCTTC 3 cut(s) 232, 607, 1023
EarI CTCTTC 3 cut(s) 232, 607, 1023
Eco130I CCWWGG 6 cut(s) 943, 1412, 1645, 2278, 2514, 2908
Eco47I GGWCC 5 cut(s) 875, 1225, 1251, 1416, 1496
Eco57I CTGAAG 1 cut(s) 1374
Eco81I CCTNAGG 1 cut(s) 983
Eco88I CYCGRG 1 cut(s) 2794
Eco91I GGTNACC 2 cut(s) 521, 1543
EcoO109I RGGNCCY 2 cut(s) 1416, 1496
EcoO65I GGTNACC 2 cut(s) 521, 1543
EcoRI GAATTC 2 cut(s) 1934, 2700
EcoRII CCWGG 4 cut(s) 230, 918, 1122, 2824
EcoT14I CCWWGG 6 cut(s) 943, 1412, 1645, 2278, 2514, 2908
EcoT22I ATGCAT 2 cut(s) 161, 2740
ErhI CCWWGG 6 cut(s) 943, 1412, 1645, 2278, 2514, 2908
Esp3I CGTCTC 2 cut(s) 1882, 2185
FaeI CATG 8 cut(s) 159, 273, 345, 1442, 1649, 1888, 1950, 2955
FalI AAGNNNNNCTT 2 cut(s) 2378, 2410
FaqI GGGAC 5 cut(s) 861, 982, 1402, 2421, 2944
FatI CATG 8 cut(s) 155, 269, 341, 1438, 1645, 1884, 1946, 2951
FbaI TGATCA 1 cut(s) 1804
Fnu4HI GCNGC 3 cut(s) 452, 979, 1119
FokI GGATG 3 cut(s) 1028, 1739, 2725
Fsp4HI GCNGC 3 cut(s) 452, 979, 1119
GluI GCNGC 3 cut(s) 452, 979, 1119
GsaI CCCAGC 1 cut(s) 816
GsuI CTGGAG 2 cut(s) 1950, 2705
HaeIII GGCC 3 cut(s) 1786, 1960, 2283
HapII CCGG 3 cut(s) 310, 1782, 2694
HgaI GACGC 1 cut(s) 2734
Hin1II CATG 8 cut(s) 159, 273, 345, 1442, 1649, 1888, 1950, 2955
HincII GTYRAC 2 cut(s) 331, 1291
HindII GTYRAC 2 cut(s) 331, 1291
HindIII AAGCTT 2 cut(s) 1652, 2870
HinfI GANTC 8 cut(s) 505, 1073, 1128, 1466, 1846, 2431, 2629, 2973
HpaII CCGG 3 cut(s) 310, 1782, 2694
HphI GGTGA 4 cut(s) 137, 386, 734, 1537
Hpy166II GTNNAC 4 cut(s) 331, 664, 1291, 2422
Hpy188I TCNGA 3 cut(s) 709, 1767, 1843
Hpy8I GTNNAC 4 cut(s) 331, 664, 1291, 2422
HpyCH4III ACNGT 8 cut(s) 143, 690, 875, 1055, 1487, 1492, 1812, 3042
HpyCH4IV ACGT 8 cut(s) 291, 1431, 1618, 1820, 1891, 2178, 2399, 2522
HpyF10VI GCNNNNNNNGC 1 cut(s) 279
HpySE526I ACGT 8 cut(s) 291, 1431, 1618, 1820, 1891, 2178, 2399, 2522
Hsp92II CATG 8 cut(s) 159, 273, 345, 1442, 1649, 1888, 1950, 2955
Kpn2I TCCGGA 1 cut(s) 309
Ksp22I TGATCA 1 cut(s) 1804
LmnI GCTCC 4 cut(s) 176, 1767, 2301, 2366
Lsp1109I GCAGC 3 cut(s) 463, 990, 1105
LweI GCATC 6 cut(s) 98, 666, 2725, 2747, 2822, 2898
MaeII ACGT 8 cut(s) 291, 1431, 1618, 1820, 1891, 2178, 2399, 2522
MaeIII GTNAC 6 cut(s) 202, 287, 521, 1074, 1543, 2199
MfeI CAATTG 3 cut(s) 583, 1922, 2204
MflI RGATCY 4 cut(s) 400, 619, 634, 994
MhlI GDGCHC 4 cut(s) 181, 666, 2252, 2795
MlsI TGGCCA 2 cut(s) 1960, 2283
MluNI TGGCCA 2 cut(s) 1960, 2283
MlyI GAGTC 3 cut(s) 1082, 1460, 2425
MmeI TCCRAC 3 cut(s) 993, 1113, 1803
Mox20I TGGCCA 2 cut(s) 1960, 2283
Mph1103I ATGCAT 2 cut(s) 161, 2740
MroI TCCGGA 1 cut(s) 309
MroXI GAANNNNTTC 2 cut(s) 729, 1043
MscI TGGCCA 2 cut(s) 1960, 2283
MslI CAYNNNNRTG 2 cut(s) 1854, 2764
Msp20I TGGCCA 2 cut(s) 1960, 2283
MspA1I CMGCKG 1 cut(s) 816
MspI CCGG 3 cut(s) 310, 1782, 2694
MspR9I CCNGG 5 cut(s) 232, 920, 1124, 1783, 2826
MunI CAATTG 3 cut(s) 583, 1922, 2204
Mva1269I GAATGC 3 cut(s) 159, 716, 2304
MvaI CCWGG 4 cut(s) 232, 920, 1124, 2826
MwoI GCNNNNNNNGC 1 cut(s) 279
NciI CCSGG 1 cut(s) 1783
NcoI CCATGG 1 cut(s) 1645
NlaIII CATG 8 cut(s) 159, 273, 345, 1442, 1649, 1888, 1950, 2955
NlaIV GGNNCC 5 cut(s) 877, 1252, 1418, 1449, 2362
NmeAIII GCCGAG 1 cut(s) 2877
NmuCI GTSAC 3 cut(s) 287, 1074, 1543
NsiI ATGCAT 2 cut(s) 161, 2740
NspI RCATGY 1 cut(s) 345
PagI TCATGA 1 cut(s) 1438
PasI CCCWGGG 1 cut(s) 1123
PciI ACATGT 1 cut(s) 341
PcsI WCGNNNNNNNCGW 1 cut(s) 1007
PctI GAATGC 3 cut(s) 159, 716, 2304
PdmI GAANNNNTTC 2 cut(s) 729, 1043
PfeI GAWTC 5 cut(s) 505, 1128, 1846, 2629, 2973
PkrI GCNGC 3 cut(s) 453, 980, 1120
PleI GAGTC 3 cut(s) 1081, 1460, 2425
PpsI GAGTC 3 cut(s) 1081, 1460, 2425
PpuMI RGGWCCY 2 cut(s) 1416, 1496
PscI ACATGT 1 cut(s) 341
PshAI GACNNNNGTC 2 cut(s) 1414, 1894
PsiI TTATAA 2 cut(s) 1704, 2373
Psp5II RGGWCCY 2 cut(s) 1416, 1496
Psp6I CCWGG 4 cut(s) 230, 918, 1122, 2824
PspEI GGTNACC 2 cut(s) 521, 1543
PspFI CCCAGC 1 cut(s) 812
PspGI CCWGG 4 cut(s) 230, 918, 1122, 2824
PspN4I GGNNCC 5 cut(s) 877, 1252, 1418, 1449, 2362
PspPI GGNCC 6 cut(s) 875, 1225, 1251, 1416, 1496, 1784
PspPPI RGGWCCY 2 cut(s) 1416, 1496
PstI CTGCAG 2 cut(s) 105, 1146
PsuI RGATCY 4 cut(s) 400, 619, 634, 994
PvuII CAGCTG 1 cut(s) 816
RsaI GTAC 7 cut(s) 340, 1057, 1489, 1835, 1861, 2423, 2521
RsaNI GTAC 7 cut(s) 339, 1056, 1488, 1834, 1860, 2422, 2520
RseI CAYNNNNRTG 2 cut(s) 1854, 2764
SatI GCNGC 3 cut(s) 452, 979, 1119
Sau96I GGNCC 6 cut(s) 875, 1225, 1251, 1416, 1496, 1784
SchI GAGTC 3 cut(s) 1082, 1460, 2425
ScrFI CCNGG 5 cut(s) 232, 920, 1124, 1783, 2826
SduI GDGCHC 4 cut(s) 181, 666, 2252, 2795
SfaNI GCATC 6 cut(s) 98, 666, 2725, 2747, 2822, 2898
SfcI CTRYAG 2 cut(s) 101, 1142
SinI GGWCC 5 cut(s) 875, 1225, 1251, 1416, 1496
SmiMI CAYNNNNRTG 2 cut(s) 1854, 2764
SmlI CTYRAG 2 cut(s) 902, 2381
SmoI CTYRAG 2 cut(s) 902, 2381
SpeI ACTAGT 1 cut(s) 1534
SsiI CCGC 4 cut(s) 280, 560, 2226, 2769
SspI AATATT 1 cut(s) 2569
StyD4I CCNGG 5 cut(s) 230, 918, 1122, 1781, 2824
StyI CCWWGG 6 cut(s) 943, 1412, 1645, 2278, 2514, 2908
TaaI ACNGT 8 cut(s) 143, 690, 875, 1055, 1487, 1492, 1812, 3042
TaiI ACGT 8 cut(s) 294, 1434, 1621, 1823, 1894, 2181, 2402, 2525
TaqI TCGA 5 cut(s) 253, 1758, 2816, 2971, 2979
TaqII GACCGA 1 cut(s) 1422
TatI WGTACW 4 cut(s) 338, 1055, 1487, 2421
TfiI GAWTC 5 cut(s) 505, 1128, 1846, 2629, 2973
TscAI CASTG 5 cut(s) 148, 326, 1227, 2113, 2359
TseFI GTSAC 3 cut(s) 287, 1074, 1543
TseI GCWGC 3 cut(s) 451, 978, 1118
Tsp45I GTSAC 3 cut(s) 287, 1074, 1543
TspRI CASTG 5 cut(s) 148, 326, 1227, 2113, 2359
VneI GTGCAC 1 cut(s) 662
VpaK11BI GGWCC 5 cut(s) 875, 1225, 1251, 1416, 1496
XapI RAATTY 8 cut(s) 361, 951, 1201, 1330, 1678, 1934, 2079, 2700
XbaI TCTAGA 2 cut(s) 616, 853
XceI RCATGY 1 cut(s) 345
XmaJI CCTAGG 2 cut(s) 1412, 2908
XmnI GAANNNNTTC 2 cut(s) 729, 1043
Zsp2I ATGCAT 2 cut(s) 161, 2740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.