Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000048

Physical Location & Seq

Genomic Coordinates Reverse (-)

17491149 .. 17494256

Gene Structure 3108 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G014530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3108 bp

ATGGATAGCTTCTGTGCAAACCTATTCAAGCCTACCAGCTATCGCTTCCTCGTCAACGATGTTGCTTGCTACTTGCTCTTTCTTTTTCTGGCATCTTCATATCTGCACACTACTAAACTGTGTTTGGGAGATGGACTTCCGAGTGGTGTGAGATCATCATCATGCATCCAGGAAGAGAGACGAGCGCTTCTCACCTTCAAAGGAGATGTTACTGATCATTCCGGTAGGCTTTCTTCTTGGGTGGGTCAGGATTGCTGCCAATGGAAAGGGATTTCATGCAACAACCGTACAGGTCATGTTGCAAGGATGGACCTCCGAAACCTGAATTATGATCAAGGCTCCTACGGAGATACTTCTTTGGGGGGTAAGATTAATCCTTCTTTGCTTAGCTTTAAGAACTTACGTTACCTTGATCTAAGCGGAAACGATTTTCAAGGACGTCGAATTCCTAACTTCTTTGGGAAGCTTCAAAGTTTGAGGTATCTCAATCTCTCATACAATTCATTTGTGGGAGAGATTCCCCCATCTCTTGGTAACCTCTCAAACTTGAATTATCTTGACCTCAGTTCTTATTATTACAGTGATGTTTCTTCCAAAAACTTGAACTGGCTTTCTCACCTCAGTTCTTATTATTACAGTGATGTTTCTTCCAAAAACTTGAATTATCTTGACCTCAGTTCTAATAATAATGATCTTTGTTCCAAAAATTTGAATTGGCTTTCTCACCTCTCTTCCCTAAAGTGTCTCAATCTTGGAGGTGTGAACCTTAGCAGCACAGGAGTAAGTTGGCTACATGATGTCAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTGGTTGCCAAATTCAAAACCTTCCACACTCCCAGCTTCCGTCAGTGAACTTCACATCCCGCCTATTGGTTCTTGATATATCCCTGAATGATATTAATTCTTCATTTCCCAGCTGGTTTTTTAATCTTACCAACCTCAAAAGACTTGATGCATCTTCCAATTTGTTCGGGCTCTTCCCTGTTGAATTTGCAAACCTTGAGTCTTTGGAAGACCTTGATTTCAGTGATAATCGGCTCCAAGGTCAAATTCCCAAAGTCATTGGTACTTTGTGCAGCCTAAGGATATTAGATCTTTGGGGGAACTCATTCAATGGTAGTTTGGAAAATGTTTTGAATGGTTTCTCAAATGGTACGAGTTATAGATTAGGACTGCTGGAAAATATGAAGGAACTTGACCTCAGTTTCAACCAATTTTCTGGTTCAATTCCACAATCTATTAGTAATTTATCATCCTTGGAAAAACTGGACATCTCGTATAATAATTTCAATGGGTCCATTCCTGAAAGTTTGGGACAACTCTCTCAGCTAGTCCACCTCGATCTATCTGATAATCCGTTGGAAGGCAATGTAAATGAAGCCCATTTCCGAACTCTCACAAAGTTGGAGTCTTTTGCAGTCTGTAGCAAATACTGGCCGACTGGGTCCCTCATTTTTAACATGGCTCATGACTGGGTTCCTCCTTTCCAACTTAATTCAATCCACATTGCCGACTGCAGAGTAGGTCCTGCCTTTGGGGTATGGCTTCAGTCTCAAACTGAATTAACGTATGTCACGCTTCGTAATACTTCAGTCTCAGATTTCATACCAGAGGAATGGTTCTTGAAGATATCTTTCCAACTCACATGGCTGGATTTATCTAACAACCAAATTCGTGGAAAGCTTCCATTTCACATGACCTCCCCGTCCTTGGAGAATATAGATTTGAGTCATAATCAATTTGAGGGCCCTCTTCCACATTGGTCTAGCGATGCTGCCAAATATCTCGATCTTCAAAGCAATTTATTTTCCGGGCCGATTCCCTCAAATTCTGATCAATTGTTGCCTCAATTGCAGGAATTGTATCTATCTGACAATCATCTGAATGGTAGTCTACCACCCTCTTTGTGCAACATGTCAAGTTTGCAAACCCTTATGTTAAGAAGCAATCACTTGTCTGGAGAATTCCCACGAGCCTGGAGTCTGTGGCCACATTTAGAAATTGTAGATGTCTCAGACAACAATTTGTCTGGCAATTTCTCCAGTTCAATGGGTGTTCCGAGCTCACTAAACATACTGAATCTGAGCAAAAACAATTTCGGGGGTCAAATTCCTTCTTCTCTATTCCAAAACTGCAGCTGGTTGAACAGAATTGATCTTGGAGGCAATAGATTTACTGGAAGCATACCTTTACAGACAAGATCAAATGTATCATCCGTATTGCATATGCTAAGATTACGATCCAACTCTTTAAGCGGACATATCCCCCATCAACTGTGCTCTCTTCAATATCTTCTTATCATAGATCTTAGCCACAACAAATTTTCAGGGACCATTCCCCAGTGCTTGTATAATCTGACTGCTTTGGCCGACGTTAATTCCGGTATTGACGTTACTGAATACAGTATTGCAAAGTATCAAGAGACGGCCAGCTTGACGTTGAAGGGAGTAGAACTCGTATATAGCACGACTCTGTATCTGGTGAAAAGCATTGATTTCTCATCAAACAACTTAGAAGGTGAAATCCCTGACGAAGTAAGCAGCCTCAGACTCTTGGGAACGTTGAACTTGTCAAGAAATCAACTCACTGGAAACATTCCTTCGAAGATTGGAAACTTGCGATGGCTGGAAACTCTTGATCTCTCACACAATCACCTCTCCGGACAGATCCCTCAAAGTTTCTCTTCTCTAACCTCTCTGTCTCACTTGAGCTTGTCTTTCAACAACTTGTCCGGAAGAATTCCTTCAGGCAACCAACTTCAAACACTCAATGATTCATCCATTTACGAAGGCAATCCATCCTTGTGTGGGGTCCCTCTTTCAACCGTCTGCCCGGGAGATGGCGCAGCTGACCCTGACGATGGTGATCATAATGATGATGATACTGATGAGAATGGGAAGTTTGGTATGGTTGTTAGCGCTGTCCTCGGCTTCATCATAGGCTTCTGGAGTGTTTGTGGCACATTGGTTATGAAGAAATCATGGAGGTATGCCTATTTTCGATTCTTTGATAACATAAAGGAGAAGGCAGCATTAGCAATTGCATTGAGAGTGGCTCGTTGGCAAAGGAGGACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

1035

Amino Acids

115.18

Weight (kDa)

5.65

Isoelectric Point (pI)

37.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	57 - 94	9.9e-12	Leucine rich repeat N-terminal domain
LRR_14	PF23598	123 - 251	1.5e-10	Leucine-rich repeat region
LRR_8	PF13855	133 - 190	2.3e-06	Leucine rich repeat
LRR_14	PF23598	237 - 389	1.9e-08	Leucine-rich repeat region
LRR_8	PF13855	405 - 464	6.3e-09	Leucine rich repeat
LRR_14	PF23598	418 - 537	1.8e-07	Leucine-rich repeat region
LRR_8	PF13855	626 - 686	7.7e-06	Leucine rich repeat
LRR_14	PF23598	854 - 937	8e-08	Leucine-rich repeat region
LRR_8	PF13855	881 - 920	2.6e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34930
fragaria_vesca	FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica	MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica	Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis	pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis	RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata	RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora	Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii	Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa	Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha	Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana	Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1735
AatII	GACGTC	1 cut(s)	442
AccB7I	CCANNNNNTGG	1 cut(s)	530
AccI	GTMKAC	1 cut(s)	1924
AccIII	TCCGGA	2 cut(s)	2690, 2762
AciI	CCGC	3 cut(s)	420, 895, 2286
AclI	AACGTT	1 cut(s)	2591
AclWI	GGATC	2 cut(s)	2265, 2692
AcoI	YGGCCR	4 cut(s)	1466, 2018, 2397, 2457
AcuI	CTGAAG	3 cut(s)	1562, 1605, 2760
AcyI	GRCGYC	1 cut(s)	439
AfaI	GTAC	3 cut(s)	289, 1099, 1186
AfeI	AGCGCT	2 cut(s)	186, 2950
AfiI	CCNNNNNNNGG	8 cut(s)	530, 901, 1394, 1565, 1741, 2838, 2870, 2891
AflIII	ACRYGT	1 cut(s)	1944
AjnI	CCWGG	2 cut(s)	168, 2006
AjuI	GAANNNNNNNTTGG	2 cut(s)	1065, 1097
AloI	GAACNNNNNNTCC	2 cut(s)	875, 907
Alw21I	GWGCWC	2 cut(s)	2096, 2312
Alw26I	GTCTC	7 cut(s)	172, 749, 1587, 1630, 2047, 2447, 2736
AlwI	GGATC	2 cut(s)	2265, 2692
Ama87I	CYCGRG	1 cut(s)	2863
Aor13HI	TCCGGA	2 cut(s)	2690, 2762
Aor51HI	AGCGCT	2 cut(s)	186, 2950
AoxI	GGCC	6 cut(s)	1466, 1777, 1844, 2018, 2397, 2457
ApaI	GGGCCC	1 cut(s)	1781
ApeKI	GCWGC	8 cut(s)	255, 771, 1107, 1805, 2166, 2571, 2876, 3059
ArsI	GACNNNNNNTTYG	4 cut(s)	1019, 1051, 1424, 1456
AseI	ATTAAT	2 cut(s)	372, 930
Asp700I	GAANNNNTTC	3 cut(s)	1139, 1172, 2773
AspLEI	GCGC	3 cut(s)	187, 2876, 2951
AspS9I	GGNCC	9 cut(s)	310, 1326, 1476, 1556, 1777, 1778, 1844, 2361, 2842
AsuC2I	CCSGG	3 cut(s)	1843, 2864, 2865
AsuHPI	GGTGA	7 cut(s)	184, 608, 716, 2524, 2561, 2675, 2906
AsuII	TTCGAA	1 cut(s)	2633
AvaI	CYCGRG	1 cut(s)	2863
AvaII	GGWCC	6 cut(s)	310, 1326, 1476, 1556, 2361, 2842
AxyI	CCTNAGG	1 cut(s)	1112
BaeGI	GKGCMC	1 cut(s)	1781
BalI	TGGCCA	1 cut(s)	2020
BanII	GRGCYC	3 cut(s)	1008, 1781, 2096
BarI	GAAGNNNNNNTAC	2 cut(s)	217, 249
BauI	CACGAG	1 cut(s)	2001
BbsI	GAAGAC	1 cut(s)	1050
Bbv12I	GWGCWC	2 cut(s)	2096, 2312
BbvI	GCAGC	8 cut(s)	242, 783, 1119, 1792, 2178, 2583, 2888, 3071
BccI	CCATC	8 cut(s)	125, 301, 532, 2307, 2646, 2836, 2864, 2885
BceAI	ACGGC	1 cut(s)	2472
BciT130I	CCWGG	2 cut(s)	170, 2008
BclI	TGATCA	4 cut(s)	214, 331, 1864, 2896
BcnI	CCSGG	3 cut(s)	1843, 2864, 2865
BcoDI	GTCTC	7 cut(s)	172, 749, 1587, 1630, 2047, 2447, 2736
BfaI	CTAG	2 cut(s)	1361, 1797
BfmI	CTRYAG	3 cut(s)	1453, 1546, 2164
BfoI	RGCGCY	2 cut(s)	188, 2952
BglII	AGATCT	2 cut(s)	1123, 2335
BisI	GCNGC	8 cut(s)	256, 772, 1108, 1806, 2167, 2572, 2877, 3060
BlpI	GCTNAGC	1 cut(s)	386
BlsI	GCNGC	8 cut(s)	257, 773, 1109, 1807, 2168, 2573, 2878, 3061
Bme1390I	CCNGG	5 cut(s)	170, 1843, 2008, 2864, 2865
Bme18I	GGWCC	6 cut(s)	310, 1326, 1476, 1556, 2361, 2842
BmeT110I	CYCGRG	1 cut(s)	2863
BmgT120I	GGNCC	9 cut(s)	310, 1326, 1476, 1556, 1777, 1778, 1844, 2361, 2842
BmrFI	CCNGG	5 cut(s)	170, 1843, 2008, 2864, 2865
BmrI	ACTGGG	3 cut(s)	1482, 1513, 2365
BmsI	GCATC	5 cut(s)	101, 174, 973, 995, 1792
BmuI	ACTGGG	3 cut(s)	1482, 1513, 2365
BpiI	GAAGAC	1 cut(s)	1050
BplI	GAGNNNNNCTC	6 cut(s)	174, 206, 2469, 2501, 3070, 3102
BpmI	CTGGAG	4 cut(s)	2010, 2029, 2056, 2998
Bpu10I	CCTNAGC	1 cut(s)	767
Bpu1102I	GCTNAGC	1 cut(s)	386
Bpu14I	TTCGAA	1 cut(s)	2633
BpuEI	CTTGAG	2 cut(s)	1052, 2758
BpuMI	CCSGG	3 cut(s)	1843, 2864, 2865
BsaBI	GATNNNNATC	3 cut(s)	157, 2269, 2895
BsaHI	GRCGYC	1 cut(s)	439
BsaJI	CCNNGG	5 cut(s)	1072, 1287, 1740, 2863, 2956
BsaWI	WCCGGW	4 cut(s)	221, 2411, 2690, 2762
BsaXI	ACNNNNNCTCC	4 cut(s)	1715, 1745, 2971, 3001
Bsc4I	CCNNNNNNNGG	8 cut(s)	530, 901, 1394, 1565, 1741, 2838, 2870, 2891
Bse1I	ACTGG	9 cut(s)	611, 1302, 1469, 1477, 1508, 2073, 2212, 2371, 2623
Bse21I	CCTNAGG	1 cut(s)	1112
Bse3DI	GCAATG	2 cut(s)	1405, 1536
Bse8I	GATNNNNATC	3 cut(s)	157, 2269, 2895
BseAI	TCCGGA	2 cut(s)	2690, 2762
BseBI	CCWGG	2 cut(s)	170, 2008
BseDI	CCNNGG	5 cut(s)	1072, 1287, 1740, 2863, 2956
BseGI	GGATG	7 cut(s)	165, 312, 890, 1283, 2243, 2807, 2828
BseJI	GATNNNNATC	3 cut(s)	157, 2269, 2895
BseLI	CCNNNNNNNGG	8 cut(s)	530, 901, 1394, 1565, 1741, 2838, 2870, 2891
BseMI	GCAATG	2 cut(s)	1405, 1536
BseMII	CTCAG	9 cut(s)	577, 634, 688, 1246, 1370, 1641, 2058, 2105, 2590
BseNI	ACTGG	9 cut(s)	611, 1302, 1469, 1477, 1508, 2073, 2212, 2371, 2623
BseSI	GKGCMC	1 cut(s)	1781
BseXI	GCAGC	8 cut(s)	242, 783, 1119, 1792, 2178, 2583, 2888, 3071
BseYI	CCCAGC	2 cut(s)	867, 944
BsgI	GTGCAG	2 cut(s)	89, 1126
BshFI	GGCC	6 cut(s)	1468, 1779, 1846, 2020, 2399, 2459
BsiHKAI	GWGCWC	2 cut(s)	2096, 2312
BsiHKCI	CYCGRG	1 cut(s)	2863
BsiSI	CCGG	6 cut(s)	222, 1842, 2412, 2691, 2763, 2864
BslFI	GGGAC	4 cut(s)	1359, 1462, 2374, 2828
BslI	CCNNNNNNNGG	8 cut(s)	530, 901, 1394, 1565, 1741, 2838, 2870, 2891
BsmAI	GTCTC	7 cut(s)	172, 749, 1587, 1630, 2047, 2447, 2736
BsmBI	CGTCTC	2 cut(s)	172, 2447
BsmFI	GGGAC	4 cut(s)	1359, 1462, 2374, 2828
BsnI	GGCC	6 cut(s)	1468, 1779, 1846, 2020, 2399, 2459
BsoBI	CYCGRG	1 cut(s)	2863
Bsp119I	TTCGAA	1 cut(s)	2633
Bsp120I	GGGCCC	1 cut(s)	1777
Bsp1286I	GDGCHC	4 cut(s)	1008, 1781, 2096, 2312
Bsp13I	TCCGGA	2 cut(s)	2690, 2762
Bsp1720I	GCTNAGC	1 cut(s)	386
BspACI	CCGC	3 cut(s)	420, 895, 2286
BspANI	GGCC	6 cut(s)	1468, 1779, 1846, 2020, 2399, 2459
BspCNI	CTCAG	9 cut(s)	576, 633, 687, 1245, 1369, 1640, 2057, 2106, 2589
BspEI	TCCGGA	2 cut(s)	2690, 2762
BspHI	TCATGA	1 cut(s)	1498
BspMAI	CTGCAG	2 cut(s)	1550, 2168
BspPI	GGATC	2 cut(s)	2265, 2692
BspQI	GCTCTTC	1 cut(s)	1013
BspT104I	TTCGAA	1 cut(s)	2633
BsrDI	GCAATG	2 cut(s)	1405, 1536
BsrI	ACTGG	9 cut(s)	611, 1302, 1469, 1477, 1508, 2073, 2212, 2371, 2623
BssECI	CCNNGG	5 cut(s)	1072, 1287, 1740, 2863, 2956
BssNI	GRCGYC	1 cut(s)	439
BssSI	CACGAG	1 cut(s)	2001
BssT1I	CCWWGG	3 cut(s)	1072, 1287, 1740
Bst2BI	CACGAG	1 cut(s)	2001
Bst2UI	CCWGG	2 cut(s)	170, 2008
Bst4CI	ACNGT	7 cut(s)	120, 287, 581, 638, 2307, 2435, 2857
Bst6I	CTCTTC	6 cut(s)	168, 736, 1013, 1788, 2319, 2719
BstACI	GRCGYC	1 cut(s)	439
BstBI	TTCGAA	1 cut(s)	2633
BstC8I	GCNNGC	2 cut(s)	67, 2461
BstEII	GGTNACC	1 cut(s)	533
BstF5I	GGATG	7 cut(s)	165, 312, 890, 1283, 2243, 2807, 2828
BstH2I	RGCGCY	2 cut(s)	188, 2952
BstHHI	GCGC	3 cut(s)	187, 2876, 2951
BstMAI	GTCTC	7 cut(s)	172, 749, 1587, 1630, 2047, 2447, 2736
BstMWI	GCNNNNNNNGC	2 cut(s)	1882, 3065
BstNI	CCWGG	2 cut(s)	170, 2008
BstNSI	RCATGY	2 cut(s)	808, 1948
BstPI	GGTNACC	1 cut(s)	533
BstSCI	CCNGG	5 cut(s)	168, 1841, 2006, 2862, 2863
BstSFI	CTRYAG	3 cut(s)	1453, 1546, 2164
BstSLI	GKGCMC	1 cut(s)	1781
BstV1I	GCAGC	8 cut(s)	242, 783, 1119, 1792, 2178, 2583, 2888, 3071
BstV2I	GAAGAC	1 cut(s)	1050
BstX2I	RGATCY	3 cut(s)	1123, 2335, 2697
BstXI	CCANNNNNNTGG	5 cut(s)	1250, 1647, 1706, 2007, 2080
BstYI	RGATCY	3 cut(s)	1123, 2335, 2697
Bsu36I	CCTNAGG	1 cut(s)	1112
BsuRI	GGCC	6 cut(s)	1468, 1779, 1846, 2020, 2399, 2459
BtgZI	GCGATG	2 cut(s)	1815, 2665
BtsCI	GGATG	7 cut(s)	165, 312, 890, 1283, 2243, 2807, 2828
BtsIMutI	CAGTG	6 cut(s)	586, 643, 885, 1063, 2378, 2616
Cac8I	GCNNGC	2 cut(s)	67, 2461
CciI	TCATGA	1 cut(s)	1498
CfoI	GCGC	3 cut(s)	187, 2876, 2951
Cfr13I	GGNCC	9 cut(s)	310, 1326, 1476, 1556, 1777, 1778, 1844, 2361, 2842
Cfr9I	CCCGGG	1 cut(s)	2863
Csp6I	GTAC	3 cut(s)	288, 1098, 1185
CspCI	CAANNNNNGTGG	2 cut(s)	1917, 1952
CviQI	GTAC	3 cut(s)	288, 1098, 1185
DrdI	GACNNNNNNGTC	1 cut(s)	1735
DseDI	GACNNNNNNGTC	1 cut(s)	1735
EaeI	YGGCCR	4 cut(s)	1466, 2018, 2397, 2457
Eam1104I	CTCTTC	6 cut(s)	168, 736, 1013, 1788, 2319, 2719
EarI	CTCTTC	6 cut(s)	168, 736, 1013, 1788, 2319, 2719
Ecl136II	GAGCTC	1 cut(s)	2094
Eco130I	CCWWGG	3 cut(s)	1072, 1287, 1740
Eco24I	GRGCYC	3 cut(s)	1008, 1781, 2096
Eco32I	GATATC	1 cut(s)	1662
Eco47I	GGWCC	6 cut(s)	310, 1326, 1476, 1556, 2361, 2842
Eco47III	AGCGCT	2 cut(s)	186, 2950
Eco53kI	GAGCTC	1 cut(s)	2094
Eco57I	CTGAAG	3 cut(s)	1562, 1605, 2760
Eco81I	CCTNAGG	1 cut(s)	1112
Eco88I	CYCGRG	1 cut(s)	2863
Eco91I	GGTNACC	1 cut(s)	533
EcoICRI	GAGCTC	1 cut(s)	2094
EcoO109I	RGGNCCY	5 cut(s)	1476, 1556, 1777, 1778, 2842
EcoO65I	GGTNACC	1 cut(s)	533
EcoRI	GAATTC	3 cut(s)	444, 1994, 2769
EcoRII	CCWGG	2 cut(s)	168, 2006
EcoRV	GATATC	1 cut(s)	1662
EcoT14I	CCWWGG	3 cut(s)	1072, 1287, 1740
EcoT22I	ATGCAT	2 cut(s)	167, 988
EcoT38I	GRGCYC	3 cut(s)	1008, 1781, 2096
ErhI	CCWWGG	3 cut(s)	1072, 1287, 1740
Esp3I	CGTCTC	2 cut(s)	172, 2447
FalI	AAGNNNNNCTT	7 cut(s)	2203, 2235, 2698, 2730, 2758, 2790, 3088
FaqI	GGGAC	4 cut(s)	1359, 1462, 2374, 2828
FauI	CCCGC	1 cut(s)	902
FauNDI	CATATG	1 cut(s)	2256
FbaI	TGATCA	4 cut(s)	214, 331, 1864, 2896
FblI	GTMKAC	1 cut(s)	1924
Fnu4HI	GCNGC	8 cut(s)	256, 772, 1108, 1806, 2167, 2572, 2877, 3060
FokI	GGATG	7 cut(s)	152, 319, 877, 1270, 2230, 2794, 2815
FriOI	GRGCYC	3 cut(s)	1008, 1781, 2096
Fsp4HI	GCNGC	8 cut(s)	256, 772, 1108, 1806, 2167, 2572, 2877, 3060
FspBI	CTAG	2 cut(s)	1361, 1797
GlaI	GCGC	3 cut(s)	186, 2875, 2950
GluI	GCNGC	8 cut(s)	256, 772, 1108, 1806, 2167, 2572, 2877, 3060
GsaI	CCCAGC	2 cut(s)	871, 948
GsuI	CTGGAG	4 cut(s)	2010, 2029, 2056, 2998
HaeII	RGCGCY	2 cut(s)	188, 2952
HaeIII	GGCC	6 cut(s)	1468, 1779, 1846, 2020, 2399, 2459
HapII	CCGG	6 cut(s)	222, 1842, 2412, 2691, 2763, 2864
HhaI	GCGC	3 cut(s)	187, 2876, 2951
Hin1I	GRCGYC	1 cut(s)	439
Hin6I	GCGC	3 cut(s)	185, 2874, 2949
HinP1I	GCGC	3 cut(s)	185, 2874, 2949
HincII	GTYRAC	2 cut(s)	55, 802
HindII	GTYRAC	2 cut(s)	55, 802
HindIII	AAGCTT	2 cut(s)	464, 1712
HpaII	CCGG	6 cut(s)	222, 1842, 2412, 2691, 2763, 2864
HphI	GGTGA	7 cut(s)	184, 608, 716, 2524, 2561, 2675, 2906
Hpy166II	GTNNAC	6 cut(s)	55, 763, 802, 883, 1366, 1925
Hpy8I	GTNNAC	6 cut(s)	55, 763, 802, 883, 1366, 1925
Hpy99I	CGWCG	2 cut(s)	444, 2405
HpyCH4III	ACNGT	7 cut(s)	120, 287, 581, 638, 2307, 2435, 2857
HpyCH4IV	ACGT	7 cut(s)	403, 439, 1598, 2403, 2421, 2468, 2591
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1882, 3065
HpySE526I	ACGT	7 cut(s)	403, 439, 1598, 2403, 2421, 2468, 2591
Hsp92I	GRCGYC	1 cut(s)	439
HspAI	GCGC	3 cut(s)	185, 2874, 2949
KflI	GGGWCCC	2 cut(s)	1476, 2842
Kpn2I	TCCGGA	2 cut(s)	2690, 2762
Ksp22I	TGATCA	4 cut(s)	214, 331, 1864, 2896
LguI	GCTCTTC	1 cut(s)	1013
LmnI	GCTCC	2 cut(s)	344, 1074
Lsp1109I	GCAGC	8 cut(s)	242, 783, 1119, 1792, 2178, 2583, 2888, 3071
LweI	GCATC	5 cut(s)	101, 174, 973, 995, 1792
MaeI	CTAG	2 cut(s)	1361, 1797
MaeII	ACGT	7 cut(s)	403, 439, 1598, 2403, 2421, 2468, 2591
MaeIII	GTNAC	5 cut(s)	208, 404, 533, 1603, 2422
MfeI	CAATTG	3 cut(s)	1868, 1880, 3069
MflI	RGATCY	3 cut(s)	1123, 2335, 2697
MhlI	GDGCHC	4 cut(s)	1008, 1781, 2096, 2312
MlsI	TGGCCA	1 cut(s)	2020
MluNI	TGGCCA	1 cut(s)	2020
MlyI	GAGTC	6 cut(s)	1043, 1448, 1768, 2020, 2494, 2574
MmeI	TCCRAC	5 cut(s)	1371, 1416, 1543, 1693, 2298
Mox20I	TGGCCA	1 cut(s)	2020
Mph1103I	ATGCAT	2 cut(s)	167, 988
MroI	TCCGGA	2 cut(s)	2690, 2762
MroXI	GAANNNNTTC	3 cut(s)	1139, 1172, 2773
MscI	TGGCCA	1 cut(s)	2020
MslI	CAYNNNNRTG	4 cut(s)	160, 1914, 2833, 2904
Msp20I	TGGCCA	1 cut(s)	2020
MspA1I	CMGCKG	3 cut(s)	948, 2169, 2879
MspI	CCGG	6 cut(s)	222, 1842, 2412, 2691, 2763, 2864
MspR9I	CCNGG	5 cut(s)	170, 1843, 2008, 2864, 2865
MunI	CAATTG	3 cut(s)	1868, 1880, 3069
MvaI	CCWGG	2 cut(s)	170, 2008
MwoI	GCNNNNNNNGC	2 cut(s)	1882, 3065
NciI	CCSGG	3 cut(s)	1843, 2864, 2865
NdeI	CATATG	1 cut(s)	2256
NmeAIII	GCCGAG	1 cut(s)	2937
NmuCI	GTSAC	1 cut(s)	1603
NsiI	ATGCAT	2 cut(s)	167, 988
NspI	RCATGY	2 cut(s)	808, 1948
NspV	TTCGAA	1 cut(s)	2633
PagI	TCATGA	1 cut(s)	1498
PciI	ACATGT	1 cut(s)	1944
PciSI	GCTCTTC	1 cut(s)	1013
PdmI	GAANNNNTTC	3 cut(s)	1139, 1172, 2773
PfeI	GAWTC	5 cut(s)	517, 1849, 2110, 2804, 3033
PflFI	GACNNNGTC	1 cut(s)	1474
PflMI	CCANNNNNTGG	1 cut(s)	530
PfoI	TCCNGGA	1 cut(s)	168
PkrI	GCNGC	8 cut(s)	257, 773, 1109, 1807, 2168, 2573, 2878, 3061
PleI	GAGTC	6 cut(s)	1042, 1447, 1767, 2019, 2494, 2574
PpsI	GAGTC	6 cut(s)	1042, 1447, 1767, 2019, 2494, 2574
PpuMI	RGGWCCY	3 cut(s)	1476, 1556, 2842
PscI	ACATGT	1 cut(s)	1944
PshBI	ATTAAT	2 cut(s)	372, 930
Psp124BI	GAGCTC	1 cut(s)	2096
Psp1406I	AACGTT	1 cut(s)	2591
Psp5II	RGGWCCY	3 cut(s)	1476, 1556, 2842
Psp6I	CCWGG	2 cut(s)	168, 2006
PspEI	GGTNACC	1 cut(s)	533
PspFI	CCCAGC	2 cut(s)	867, 944
PspGI	CCWGG	2 cut(s)	168, 2006
PspOMI	GGGCCC	1 cut(s)	1777
PspPI	GGNCC	9 cut(s)	310, 1326, 1476, 1556, 1777, 1778, 1844, 2361, 2842
PspPPI	RGGWCCY	3 cut(s)	1476, 1556, 2842
PsrI	GAACNNNNNNTAC	2 cut(s)	389, 421
PstI	CTGCAG	2 cut(s)	1550, 2168
PsuI	RGATCY	3 cut(s)	1123, 2335, 2697
PsyI	GACNNNGTC	1 cut(s)	1474
PvuII	CAGCTG	3 cut(s)	948, 2169, 2879
RsaI	GTAC	3 cut(s)	289, 1099, 1186
RsaNI	GTAC	3 cut(s)	288, 1098, 1185
RseI	CAYNNNNRTG	4 cut(s)	160, 1914, 2833, 2904
SacI	GAGCTC	1 cut(s)	2096
SapI	GCTCTTC	1 cut(s)	1013
SatI	GCNGC	8 cut(s)	256, 772, 1108, 1806, 2167, 2572, 2877, 3060
Sau96I	GGNCC	9 cut(s)	310, 1326, 1476, 1556, 1777, 1778, 1844, 2361, 2842
SchI	GAGTC	6 cut(s)	1043, 1448, 1768, 2020, 2494, 2574
ScrFI	CCNGG	5 cut(s)	170, 1843, 2008, 2864, 2865
SduI	GDGCHC	4 cut(s)	1008, 1781, 2096, 2312
SfaNI	GCATC	5 cut(s)	101, 174, 973, 995, 1792
SfcI	CTRYAG	3 cut(s)	1453, 1546, 2164
SfuI	TTCGAA	1 cut(s)	2633
SinI	GGWCC	6 cut(s)	310, 1326, 1476, 1556, 2361, 2842
SmaI	CCCGGG	1 cut(s)	2865
SmiMI	CAYNNNNRTG	4 cut(s)	160, 1914, 2833, 2904
SmlI	CTYRAG	2 cut(s)	1031, 2737
SmoI	CTYRAG	2 cut(s)	1031, 2737
SsiI	CCGC	3 cut(s)	420, 895, 2286
SspMI	CTAG	2 cut(s)	1361, 1797
SstI	GAGCTC	1 cut(s)	2096
StyD4I	CCNGG	5 cut(s)	168, 1841, 2006, 2862, 2863
StyI	CCWWGG	3 cut(s)	1072, 1287, 1740
TaaI	ACNGT	7 cut(s)	120, 287, 581, 638, 2307, 2435, 2857
TaiI	ACGT	7 cut(s)	406, 442, 1601, 2406, 2424, 2471, 2594
TaqI	TCGA	5 cut(s)	442, 1371, 1818, 2633, 3031
TfiI	GAWTC	5 cut(s)	517, 1849, 2110, 2804, 3033
TscAI	CASTG	6 cut(s)	586, 643, 885, 1063, 2378, 2623
TseFI	GTSAC	1 cut(s)	1603
TseI	GCWGC	8 cut(s)	255, 771, 1107, 1805, 2166, 2571, 2876, 3059
Tsp45I	GTSAC	1 cut(s)	1603
TspGWI	ACGGA	4 cut(s)	360, 864, 1377, 2236
TspMI	CCCGGG	1 cut(s)	2863
TspRI	CASTG	6 cut(s)	586, 643, 885, 1063, 2378, 2623
Tth111I	GACNNNGTC	1 cut(s)	1474
Van91I	CCANNNNNTGG	1 cut(s)	530
VpaK11BI	GGWCC	6 cut(s)	310, 1326, 1476, 1556, 2361, 2842
VspI	ATTAAT	2 cut(s)	372, 930
XceI	RCATGY	2 cut(s)	808, 1948
XmaI	CCCGGG	1 cut(s)	2863
XmiI	GTMKAC	1 cut(s)	1924
XmnI	GAANNNNTTC	3 cut(s)	1139, 1172, 2773
XspI	CTAG	2 cut(s)	1361, 1797
ZraI	GACGTC	1 cut(s)	440
Zsp2I	ATGCAT	2 cut(s)	167, 988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.