RchiOBHm_Chr5g0020901

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
15171707 .. 15174808
3102 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30097

Sequence Viewer

Length: 3102 bp
ATGGATATCTATGTTTACTTCAACCCTATTTCTCGCCTCATTCTCCACTTGCTGCTCCTGTTGTTTTTGGCATCGTCATGCCTGAACACGAGCAGCATTGTGAAATCATGCATGAAGGAAGAGAGACAAGCGCTTCTCAGCTTCAAACAAGATCTCACTGATCCGTCTGGTAGGCTTTCTTCCTGGGTGGGTCATCAATGTTGTCGATGGAGAGGCATTTCATGCAACAACCGCACTGGTCATGTTGCAATCATTGACCTCCGAAATCCATATCCATGCATTGAGTATATCGATCTGTGGACCTCCGCATGGTACTGGAACAGCACTAAATTTGAAGAATCTTGTTGTTTGGGGGGTAAGTTGAATCATTCTTTGCTTGACTTGAAACATTTGAGTTACTTAGACTTGAGCAACAATTACTTCAAAGGGATTCACATTCCCAACTTCATTGGCCAGCTTACAAGTTTGAGGTATCTCAATCTCTCGCACAATTCATTTTGGGGAGAGGTTCCCCCATCTCTTGGTAACCTCTCAAACCTGAACTATCTTGACCTCAGTTCTATTTATCCTTCTTCCAAAAACTCGAATTGGCTTTCTCATCTCTCTTCCCTAAAGTACCTCAATCTTAGAGGTGTGGACCTTAGCAGCACAGGAGTAAGTTGGCTACATGATGTCAACATGATTCCTTCACTCTTGGAGTTGCATTTGTCTTCTTGCCAAATTAGTGGAAACCAGCTTCCACTCTCGCTGCCCACAATTAACTTCACATCACTTTTGGTCCTCGATATGTCATTTAACGATATTAATTCTTCGTTTCCTAAATGGATGTTTAATCTTACTAGTCTTACAAAACTTGATCTTGGGGATAATCCTTTCATTCGCCCCTCTTCCAAAAACTTGAATTGGCTTTCTCATCTCTCTTCCCTAAACTACCTCAATCTTAGAGGTGTGGACCTTAGCAGCATAGGAGTAAGTTGGCTACATGATGTCAACATGCTTCCTTCACTCTTGGAGTTGCATTTGTCTTCTTGCCAAATTAGTGGAAACCAGCTTCCACTCTCGCTGCCCACAATTAACTTCACATCACTTTTGGTCCTTGATATGTCATTTAACGATATTAATTCTTCGTTTCCTAAATGGATGTTTAATCTTACTAGTCTTACAAAACTTGATCTTGGGGGTAATCCTTTCATTCGCCCCTCTCTTGATGAATTTGTAAGACTAAAATCTCTAGAACACCTTGACTTATCGAGTATTGGACTCAAAGGTCAATTATTTCCCAAATTCTTTGGAAATTTGTGCAAGCTAAAGTCATTAGATCTTCCAGCCAACGACTTTGATGGGGGGATTGAACAGTTTTTGAGTGGTTTTTCAAATTGTTCATTTAATAGAATGGAGTCACTAGATTTATCTAGCTGTGGGCTGGTAGGCAAATTCCCTAGTTCGCTGCGAATGTTGAAAAGCCTGCAATATCTCTCACTCAGTGACAATTCCTTGAATGGGTCCATACCCGAAAGTTTGGGAAAACTCACTCAGCTGGTTAGCCTTAATCTGTTTGATAATTTATGGGAAGGCAGCTTAACGGAAGCCCATCTCATAAATCTCACAAGATTAAAGTCTTTTAGTGTAAGCACTGATCGACTTGTGCCCATCATTTTCAATTTGACTGATTATGAATGGGTTCCTCCTTTCAAGCTCCGTGATATTTACATGGACAATTGCCGAGTAGGTGCTGGCTTCCCTCTATGGCTTCAATCTCAAACTGAGCTCGTTCATGTCTTACTTACGAATGCTGGAATCTCGGGTCCAATACCAGAGGAATGGCTCTTTAAGATATCTTCCCAAATCAAATTTTTGGATTTATCTTACAATCAAATAAGTGGAAAGCTTCCGTTCCGATTCAACTCTTTTCCGATTCTGCATACCATAGATTTGAGCCATAATCAATTTGATGACACTATTCCATCATCTATTTGTAGCATTCAATCTCTGTATTACCTTGCTCTGAACAACAACCAGTTATCCGGAGAATTCCCTAAAGAATGGAGTTTGTGGAGCGGCATATACACTCTGGATGTCTCAAACAACAATATGTCTGGTAATATTCCAAGCTTAATGGGCATTCCAAGTTCTCTTTCAATACTGAAGATAGACAACAATCATTTTAGTGGAGAAATTCCTTCTGCCTTGCAAAATTGCTCTGGTTTGGAGAGACTTTATCTTGGAGGCAACAAATTTACTGGAAGCATACCTTCTTGGATAGGATCAAATTCAAATGTATCCGGATTCATAGTGCTGCAATTGCAATCGAACTCTTTAAGTGGACATATTCCTCATCATTTGTGCAGTCTTCCTTTCCTTCAGATCCTAGATCTTAGTCACAACAGATTTTCAGGGACTATTCCCAAGTGTTTGAATAAGTTGACTTCCTTAGTCTATCGTAATTATAGTGGCTGGAGCGGCGGTAGTGAGTCTGAGGTGACAACTGTGACTATAAAAGGAAGAGCAAGTGAATACTTCTTATCCAATGCAGAACTTCTAACCATTATTGATTTTTCAAGTAATGATTTAGAAGGTGAAATTCCTGAAGAAATCAGCAGTCTTGTTGGATTAGGCACATTAAACCTGTCCATAAATCGATTAAGTGGAAATATCCCCTCAAAAATTGGAAACTTGAAGTTGCTCGAAACACTTGACCTCTCTCAGAACCAACTTTCAGGACAGATACCAAATAGTCTCGCTTCTCTGACCTTCTTATCTCACTTGAACTTGTCACGCAACAACTTGACCGGAAGAATTCCTTCAGGCAACCAACTTCAGACGCTCGATGATTCATCTATTTATGAGGGCAATCCTTCACTCTGTGGATTTCCTCTTTCAAAATGCCCAGAAGACAGAGACAAGATGCATGAGCCTCATGCAGAAGACAATAATGATCATGAAGCAGATGATGAAAAGCTTGGTTTATATACCAGCGTAGTGCTTGGCTTTATCATAGGCTTTTGGGGTGTTTGTGGCACATTGATATTGAAGAAGTCATGGAGGTATGCTTATTTTCAATTTTTTGACCACATCAGAGAGAAAGTAGAACTGCTGCACTAG

Protein Analysis

1033

Amino Acids

115.54

Weight (kDa)

5.84

Isoelectric Point (pI)

37.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 76 1e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 125 - 319 4.4e-11 Leucine-rich repeat region
LRR_14 PF23598 194 - 419 2.2e-08 Leucine-rich repeat region
LRR_14 PF23598 427 - 588 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 464 - 521 6.5e-07 Leucine rich repeat
LRR_14 PF23598 841 - 945 2.8e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1266
AccB7I CCANNNNNTGG 1 cut(s) 521
AccBSI CCGCTC 2 cut(s) 2058, 2460
AccIII TCCGGA 2 cut(s) 2024, 2282
AciI CCGC 5 cut(s) 232, 306, 2058, 2460, 2463
AclWI GGATC 3 cut(s) 155, 2272, 2359
AcoI YGGCCR 1 cut(s) 451
AcuI CTGAAG 5 cut(s) 2165, 2345, 2607, 2787, 2801
AdeI CACNNNGTG 2 cut(s) 1484, 2864
AfaI GTAC 2 cut(s) 314, 617
AfeI AGCGCT 1 cut(s) 132
AfiI CCNNNNNNNGG 3 cut(s) 309, 521, 1500
AhlI ACTAGT 2 cut(s) 839, 1154
AjnI CCWGG 1 cut(s) 182
AjuI GAANNNNNNNTTGG 2 cut(s) 2119, 2151
Alw21I GWGCWC 1 cut(s) 1770
Alw26I GTCTC 5 cut(s) 118, 2083, 2206, 2741, 2892
AlwI GGATC 3 cut(s) 155, 2272, 2359
Ama87I CYCGRG 1 cut(s) 1801
Aor13HI TCCGGA 2 cut(s) 2024, 2282
Aor51HI AGCGCT 1 cut(s) 132
AoxI GGCC 1 cut(s) 451
AseI ATTAAT 2 cut(s) 804, 1119
Asp700I GAANNNNTTC 2 cut(s) 1680, 2800
AspLEI GCGC 1 cut(s) 133
AspS9I GGNCC 7 cut(s) 300, 637, 778, 952, 1093, 1503, 1805
AsuHPI GGTGA 2 cut(s) 2491, 2588
AvaI CYCGRG 1 cut(s) 1801
AvaII GGWCC 7 cut(s) 300, 637, 778, 952, 1093, 1503, 1805
BaeGI GKGCMC 1 cut(s) 1650
BalI TGGCCA 1 cut(s) 453
BanII GRGCYC 1 cut(s) 1770
BarI GAAGNNNNNNTAC 2 cut(s) 163, 195
BauI CACGAG 1 cut(s) 88
BbsI GAAGAC 5 cut(s) 702, 1017, 2342, 2898, 2931
Bbv12I GWGCWC 1 cut(s) 1770
BccI CCATC 6 cut(s) 201, 523, 1334, 1599, 1658, 1972
BciT130I CCWGG 1 cut(s) 184
BciVI GTATCC 1 cut(s) 2290
BclI TGATCA 1 cut(s) 2935
BcoDI GTCTC 5 cut(s) 118, 2083, 2206, 2741, 2892
BcuI ACTAGT 2 cut(s) 839, 1154
BfaI CTAG 8 cut(s) 840, 1155, 1232, 1403, 1413, 1440, 2369, 3100
BfoI RGCGCY 1 cut(s) 134
BfuI GTATCC 1 cut(s) 2290
BglII AGATCT 3 cut(s) 151, 1318, 2371
Bme1390I CCNGG 1 cut(s) 184
Bme18I GGWCC 7 cut(s) 300, 637, 778, 952, 1093, 1503, 1805
BmeT110I CYCGRG 1 cut(s) 1801
BmgT120I GGNCC 7 cut(s) 300, 637, 778, 952, 1093, 1503, 1805
BmiI GGNNCC 4 cut(s) 510, 1504, 1683, 1806
BmrFI CCNGG 1 cut(s) 184
BmsI GCATC 2 cut(s) 80, 2895
BpiI GAAGAC 5 cut(s) 702, 1017, 2342, 2898, 2931
BpmI CTGGAG 1 cut(s) 2476
Bpu10I CCTNAGC 2 cut(s) 641, 956
BpuEI CTTGAG 1 cut(s) 427
Bsa29I ATCGAT 2 cut(s) 291, 2638
BsaJI CCNNGG 1 cut(s) 183
BsaWI WCCGGW 3 cut(s) 2024, 2282, 2789
BsaXI ACNNNNNCTCC 2 cut(s) 2449, 2479
Bsc4I CCNNNNNNNGG 3 cut(s) 309, 521, 1500
Bse1I ACTGG 4 cut(s) 241, 320, 2017, 2245
BseAI TCCGGA 2 cut(s) 2024, 2282
BseBI CCWGG 1 cut(s) 184
BseCI ATCGAT 2 cut(s) 291, 2638
BseDI CCNNGG 1 cut(s) 183
BseGI GGATG 3 cut(s) 831, 1146, 2080
BseLI CCNNNNNNNGG 3 cut(s) 309, 521, 1500
BseMII CTCAG 7 cut(s) 151, 568, 1495, 1547, 1755, 2466, 2717
BseNI ACTGG 4 cut(s) 241, 320, 2017, 2245
BseSI GKGCMC 1 cut(s) 1650
BsgI GTGCAG 2 cut(s) 2365, 3080
BshFI GGCC 1 cut(s) 453
BshVI ATCGAT 2 cut(s) 291, 2638
BsiHKAI GWGCWC 1 cut(s) 1770
BsiHKCI CYCGRG 1 cut(s) 1801
BsiSI CCGG 3 cut(s) 2025, 2283, 2790
BslFI GGGAC 1 cut(s) 2410
BslI CCNNNNNNNGG 3 cut(s) 309, 521, 1500
BsmAI GTCTC 5 cut(s) 118, 2083, 2206, 2741, 2892
BsmFI GGGAC 1 cut(s) 2410
BsmI GAATGC 3 cut(s) 1795, 1980, 2121
BsnI GGCC 1 cut(s) 453
BsoBI CYCGRG 1 cut(s) 1801
Bsp1286I GDGCHC 2 cut(s) 1650, 1770
Bsp13I TCCGGA 2 cut(s) 2024, 2282
BspACI CCGC 5 cut(s) 232, 306, 2058, 2460, 2463
BspANI GGCC 1 cut(s) 453
BspCNI CTCAG 7 cut(s) 150, 567, 1494, 1546, 1756, 2467, 2716
BspDI ATCGAT 2 cut(s) 291, 2638
BspEI TCCGGA 2 cut(s) 2024, 2282
BspHI TCATGA 1 cut(s) 2938
BspLI GGNNCC 4 cut(s) 510, 1504, 1683, 1806
BspPI GGATC 3 cut(s) 155, 2272, 2359
BspQI GCTCTTC 1 cut(s) 2497
BsrBI CCGCTC 2 cut(s) 2058, 2460
BsrI ACTGG 4 cut(s) 241, 320, 2017, 2245
BssECI CCNNGG 1 cut(s) 183
BssSI CACGAG 1 cut(s) 88
Bst2BI CACGAG 1 cut(s) 88
Bst2UI CCWGG 1 cut(s) 184
Bst4CI ACNGT 2 cut(s) 1356, 2488
Bst6I CTCTTC 5 cut(s) 114, 610, 892, 925, 2497
BstAPI GCANNNNNTGC 1 cut(s) 222
BstC8I GCNNGC 4 cut(s) 455, 1304, 1466, 1735
BstEII GGTNACC 1 cut(s) 524
BstF5I GGATG 3 cut(s) 831, 1146, 2080
BstH2I RGCGCY 1 cut(s) 134
BstHHI GCGC 1 cut(s) 133
BstMAI GTCTC 5 cut(s) 118, 2083, 2206, 2741, 2892
BstMWI GCNNNNNNNGC 5 cut(s) 222, 231, 2118, 2302, 2460
BstNI CCWGG 1 cut(s) 184
BstNSI RCATGY 1 cut(s) 997
BstPI GGTNACC 1 cut(s) 524
BstSCI CCNGG 1 cut(s) 182
BstSLI GKGCMC 1 cut(s) 1650
BstV2I GAAGAC 5 cut(s) 702, 1017, 2342, 2898, 2931
BstX2I RGATCY 4 cut(s) 151, 1318, 2364, 2371
BstXI CCANNNNNNTGG 3 cut(s) 725, 1040, 1821
BstYI RGATCY 4 cut(s) 151, 1318, 2364, 2371
Bsu15I ATCGAT 2 cut(s) 291, 2638
BsuI GTATCC 1 cut(s) 2290
BsuRI GGCC 1 cut(s) 453
BsuTUI ATCGAT 2 cut(s) 291, 2638
BtsCI GGATG 3 cut(s) 831, 1146, 2080
BtsIMutI CAGTG 4 cut(s) 156, 234, 1489, 1632
Cac8I GCNNGC 4 cut(s) 455, 1304, 1466, 1735
CciI TCATGA 1 cut(s) 2938
CfoI GCGC 1 cut(s) 133
Cfr13I GGNCC 7 cut(s) 300, 637, 778, 952, 1093, 1503, 1805
ClaI ATCGAT 2 cut(s) 291, 2638
CseI GACGC 1 cut(s) 2830
Csp6I GTAC 2 cut(s) 313, 616
CviQI GTAC 2 cut(s) 313, 616
DraIII CACNNNGTG 2 cut(s) 1484, 2864
DrdI GACNNNNNNGTC 1 cut(s) 1266
DseDI GACNNNNNNGTC 1 cut(s) 1266
EaeI YGGCCR 1 cut(s) 451
Eam1104I CTCTTC 5 cut(s) 114, 610, 892, 925, 2497
EarI CTCTTC 5 cut(s) 114, 610, 892, 925, 2497
Ecl136II GAGCTC 1 cut(s) 1768
Eco24I GRGCYC 1 cut(s) 1770
Eco32I GATATC 2 cut(s) 7, 1836
Eco47I GGWCC 7 cut(s) 300, 637, 778, 952, 1093, 1503, 1805
Eco47III AGCGCT 1 cut(s) 132
Eco53kI GAGCTC 1 cut(s) 1768
Eco57I CTGAAG 5 cut(s) 2165, 2345, 2607, 2787, 2801
Eco88I CYCGRG 1 cut(s) 1801
Eco91I GGTNACC 1 cut(s) 524
EcoICRI GAGCTC 1 cut(s) 1768
EcoO65I GGTNACC 1 cut(s) 524
EcoRI GAATTC 2 cut(s) 2030, 2796
EcoRII CCWGG 1 cut(s) 182
EcoRV GATATC 2 cut(s) 7, 1836
EcoT22I ATGCAT 3 cut(s) 113, 281, 2910
EcoT38I GRGCYC 1 cut(s) 1770
FalI AAGNNNNNCTT 4 cut(s) 2236, 2268, 2785, 2817
FaqI GGGAC 1 cut(s) 2410
FbaI TGATCA 1 cut(s) 2935
FokI GGATG 3 cut(s) 838, 1153, 2087
FriOI GRGCYC 1 cut(s) 1770
FspBI CTAG 8 cut(s) 840, 1155, 1232, 1403, 1413, 1440, 2369, 3100
GlaI GCGC 1 cut(s) 132
GsuI CTGGAG 1 cut(s) 2476
HaeII RGCGCY 1 cut(s) 134
HaeIII GGCC 1 cut(s) 453
HapII CCGG 3 cut(s) 2025, 2283, 2790
HgaI GACGC 1 cut(s) 2830
HhaI GCGC 1 cut(s) 133
Hin6I GCGC 1 cut(s) 131
HinP1I GCGC 1 cut(s) 131
HincII GTYRAC 3 cut(s) 676, 991, 2424
HindII GTYRAC 3 cut(s) 676, 991, 2424
HindIII AAGCTT 3 cut(s) 1886, 2110, 2957
HpaII CCGG 3 cut(s) 2025, 2283, 2790
HphI GGTGA 2 cut(s) 2491, 2588
Hpy166II GTNNAC 8 cut(s) 16, 300, 637, 676, 952, 991, 2324, 2424
Hpy188III TCNNGA 9 cut(s) 548, 1205, 1232, 2025, 2072, 2283, 2585, 2718, 2939
Hpy8I GTNNAC 8 cut(s) 16, 300, 637, 676, 952, 991, 2324, 2424
HpyCH4III ACNGT 2 cut(s) 1356, 2488
HpyF10VI GCNNNNNNNGC 5 cut(s) 222, 231, 2118, 2302, 2460
HspAI GCGC 1 cut(s) 131
Kpn2I TCCGGA 2 cut(s) 2024, 2282
Ksp22I TGATCA 1 cut(s) 2935
LguI GCTCTTC 1 cut(s) 2497
LmnI GCTCC 4 cut(s) 60, 1701, 2055, 2457
LweI GCATC 2 cut(s) 80, 2895
MaeI CTAG 8 cut(s) 840, 1155, 1232, 1403, 1413, 1440, 2369, 3100
MaeIII GTNAC 8 cut(s) 395, 524, 1398, 1484, 2378, 2479, 2488, 2772
MbiI CCGCTC 2 cut(s) 2058, 2460
MfeI CAATTG 2 cut(s) 1717, 2300
MflI RGATCY 4 cut(s) 151, 1318, 2364, 2371
MhlI GDGCHC 2 cut(s) 1650, 1770
MlsI TGGCCA 1 cut(s) 453
MluNI TGGCCA 1 cut(s) 453
MlyI GAGTC 3 cut(s) 1254, 1406, 2480
MmeI TCCRAC 1 cut(s) 2587
Mox20I TGGCCA 1 cut(s) 453
Mph1103I ATGCAT 3 cut(s) 113, 281, 2910
MroI TCCGGA 2 cut(s) 2024, 2282
MroXI GAANNNNTTC 2 cut(s) 1680, 2800
MscI TGGCCA 1 cut(s) 453
MslI CAYNNNNRTG 3 cut(s) 76, 274, 2166
Msp20I TGGCCA 1 cut(s) 453
MspA1I CMGCKG 1 cut(s) 1537
MspI CCGG 3 cut(s) 2025, 2283, 2790
MspR9I CCNGG 1 cut(s) 184
MunI CAATTG 2 cut(s) 1717, 2300
Mva1269I GAATGC 3 cut(s) 1795, 1980, 2121
MvaI CCWGG 1 cut(s) 184
MwoI GCNNNNNNNGC 5 cut(s) 222, 231, 2118, 2302, 2460
NlaIV GGNNCC 4 cut(s) 510, 1504, 1683, 1806
NmeAIII GCCGAG 1 cut(s) 1748
NmuCI GTSAC 6 cut(s) 1398, 1484, 2378, 2479, 2488, 2772
NsiI ATGCAT 3 cut(s) 113, 281, 2910
NspI RCATGY 1 cut(s) 997
PagI TCATGA 1 cut(s) 2938
PciSI GCTCTTC 1 cut(s) 2497
PctI GAATGC 3 cut(s) 1795, 1980, 2121
PdmI GAANNNNTTC 2 cut(s) 1680, 2800
PfeI GAWTC 9 cut(s) 338, 364, 430, 682, 1797, 1899, 1915, 2286, 2831
PflMI CCANNNNNTGG 1 cut(s) 521
PleI GAGTC 3 cut(s) 1254, 1405, 2479
PpsI GAGTC 3 cut(s) 1254, 1405, 2479
PshBI ATTAAT 2 cut(s) 804, 1119
Psp124BI GAGCTC 1 cut(s) 1770
Psp6I CCWGG 1 cut(s) 182
PspEI GGTNACC 1 cut(s) 524
PspGI CCWGG 1 cut(s) 182
PspN4I GGNNCC 4 cut(s) 510, 1504, 1683, 1806
PspPI GGNCC 7 cut(s) 300, 637, 778, 952, 1093, 1503, 1805
PsuI RGATCY 4 cut(s) 151, 1318, 2364, 2371
PvuII CAGCTG 1 cut(s) 1537
RsaI GTAC 2 cut(s) 314, 617
RsaNI GTAC 2 cut(s) 313, 616
RseI CAYNNNNRTG 3 cut(s) 76, 274, 2166
SacI GAGCTC 1 cut(s) 1770
SapI GCTCTTC 1 cut(s) 2497
Sau96I GGNCC 7 cut(s) 300, 637, 778, 952, 1093, 1503, 1805
SchI GAGTC 3 cut(s) 1254, 1406, 2480
ScrFI CCNGG 1 cut(s) 184
SduI GDGCHC 2 cut(s) 1650, 1770
SfaNI GCATC 2 cut(s) 80, 2895
SinI GGWCC 7 cut(s) 300, 637, 778, 952, 1093, 1503, 1805
SmiMI CAYNNNNRTG 3 cut(s) 76, 274, 2166
SmlI CTYRAG 1 cut(s) 406
SmoI CTYRAG 1 cut(s) 406
SpeI ACTAGT 2 cut(s) 839, 1154
SsiI CCGC 5 cut(s) 232, 306, 2058, 2460, 2463
SspI AATATT 1 cut(s) 2104
SspMI CTAG 8 cut(s) 840, 1155, 1232, 1403, 1413, 1440, 2369, 3100
SstI GAGCTC 1 cut(s) 1770
StyD4I CCNGG 1 cut(s) 182
TaaI ACNGT 2 cut(s) 1356, 2488
TauI GCSGC 2 cut(s) 2061, 2463
TfiI GAWTC 9 cut(s) 338, 364, 430, 682, 1797, 1899, 1915, 2286, 2831
TscAI CASTG 4 cut(s) 163, 241, 1489, 1639
TseFI GTSAC 6 cut(s) 1398, 1484, 2378, 2479, 2488, 2772
Tsp45I GTSAC 6 cut(s) 1398, 1484, 2378, 2479, 2488, 2772
TspGWI ACGGA 4 cut(s) 153, 1598, 1688, 1881
TspRI CASTG 4 cut(s) 163, 241, 1489, 1639
Van91I CCANNNNNTGG 1 cut(s) 521
VpaK11BI GGWCC 7 cut(s) 300, 637, 778, 952, 1093, 1503, 1805
VspI ATTAAT 2 cut(s) 804, 1119
XbaI TCTAGA 1 cut(s) 1231
XceI RCATGY 1 cut(s) 997
XmnI GAANNNNTTC 2 cut(s) 1680, 2800
XspI CTAG 8 cut(s) 840, 1155, 1232, 1403, 1413, 1440, 2369, 3100
Zsp2I ATGCAT 3 cut(s) 113, 281, 2910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.