Rorug02G0583400

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
70659095 .. 70661047
1953 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0583400.1

Sequence Viewer

Length: 1905 bp
ATGAAATGGTCAGCACACACTGCCTTGACCTTACTCTCCACGCGACACCTCCGTTCTCTCATCCGAGAATGCACGCGCCGATCCTCCATCGACCTCGGCAAGAAGCTCCACGCCGCCATCATCACCAGCGGCCTTGCCGCCTCAGCAGACTCGTTCCTCTACAATGCCCTGCTCCATCTTCACGCTGCTTGTGGAACTGCAATCCATGCACGCAAGGTGTTCGACGAAATTCCCAGCTCGCACAAAGACACTGTGGACTGGACCGTCCTCATGGGAGGCTTTGCTCGCCACGGCATGCATCAAAATGGGGTTCGCTTGTTTGTGGAAATGAGAAGAGAGGGAGTGAGTGTGGACGACGTTGCCGTGGTTTGCTTGTTCAGTGGGTGTGCTCGGTTGGGCAACGTTGAGGTTGGGTTGCAAGGACATGGGTTGATGGTGAAGGTGGGGTTGAGTTCCAGTGTTAAAGCCTGCAATGCGGCTATGGATATGTATGTCAAGTGTGGCCAGTTGAGCATGGCGAAGAGGGTTTTCGACGAAATGGGGGAGCGAAGTGTTGTCTCTTGGACTGTGATTTTGGATGGAATGGTTAGATGGGAAGGTGTGGGAAGTGGGAGAGTGGTGTTTGATACAATGCCTGAGAGGAATGAGGTTGCTTGGACGATTATGATTGTTGGGTATGTGAGTGTTGGGCTTGTCCGGGAAGGTTTTTCTCTTCTGCGAGAAATGGTTTTTGGTTGTGGTTTGGGATTGAACTATGTCACACTTTGTTCATTTTTATCGGCTTGTGCACAATCGGGAGGTGTGGTGATCGGCAGTTGGGTTCATGCCTATGCTTATAAGGCAATGGGGAATGAGATGGATTTTATGGTTGGCACAGCTCTGGTTGACATGTATGCAAAATGTGGTAGAGTAGACACAGCGATGAAAGTTTTTGAGCACATGAAGTACAGGAATGTAGTGACATGGAATGCTTTGCTTAGTGGGTTGGCAATGCATGGAAGGGGCAGAGTTGTTTTGAAGGTGTTTCCTCAAATGCTGAAAGAGACCAAGCCAGACGATTTAACCTTCACTGCTTTGTTGTGTGCTTGCAGCCACTCAGGACTTGTTGAACAGGGTCGCCATTACTTTTGGAATCTTGAAGCATTGTATGGCGTAACACCTAAGATAGAGCATTATGCTTGCATGGTGGATCTTCTGGGCAGGGCTGGCCATTTAGAAGAGGCTGGGATTTTTATAAAGAGAATGCCAATGCCTCCGAATGAGGTTGTTTTGGGTTCTCTTATTGGTTCATGCAGTGTCCATGGAAAGCTACAGCTAGGTGAACGCATTCTGCAAGACCTGGTTCAAATAGATCCCCAAAACACAGAGTATCATGTCCTTCTCTCAAACATGTATGCTTTGGGTGGAAACCAGGACAAGGCTAATTTGTTGAGGCAGGGCCTTAAGAATAGGGGTATAAGAAAGATGCCTGGAATGAGCTCTCTTTATGTTGGTGGCCAAATTCATCAGTTCAGTGCTGGAGACAAGTCACACCCACAGACAATGGAGATTTACATGAAGTTGGATGAGATGATACAAAAGTTGAGAATGGCCGGTTATGTCCCAAATGCTGCTACTCAAGTTTTCCCTGGTTTTGACAGCACAGACGAGAGTAATGCAGATAAGTTGGAGGAGATAGAACAGGCATTGTTCTCCCACAGTGAAAAGTTGGCAGTTTGTTATGGACTTATAAGCACAAGAGCAGGTTTGCCGCTTCATATATTCAAAAATCTACGTATCTGCCAAGACTGTCATTCTGTGATGAAACTAGTTTCTCATGTTTATAATCGAGAAATTGTCATTAGGGATCGCAACCGGTTTCATTGTTTCAAGCAAGGTTCTTGTTCTTGCTACGATTATTGGTGA

Protein Analysis

634

Amino Acids

70.36

Weight (kDa)

8.48

Isoelectric Point (pI)

42.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 83 - 131 1e-07 PPR repeat family
PPR_2 PF13041 317 - 364 1e-08 PPR repeat family
E_motif PF20431 434 - 494 6.9e-10 E motif
Eplus_motif PF20430 501 - 528 2.8e-08 E+ motif
DYW_deaminase PF14432 557 - 634 2e-32 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 837, 1235, 1730, 1824
AasI GACNNNNNNGTC 1 cut(s) 263
Acc36I ACCTGC 1 cut(s) 1733
AccI GTMKAC 1 cut(s) 912
AccII CGCG 2 cut(s) 43, 76
AciI CCGC 5 cut(s) 114, 129, 138, 476, 1751
AclI AACGTT 1 cut(s) 402
AclWI GGATC 4 cut(s) 75, 1197, 1346, 1854
AcoI YGGCCR 4 cut(s) 502, 1207, 1495, 1590
AcsI RAATTY 2 cut(s) 228, 1500
AfaI GTAC 1 cut(s) 947
AfiI CCNNNNNNNGG 1 cut(s) 1417
AflII CTTAAG 1 cut(s) 1442
AflIII ACRYGT 2 cut(s) 888, 1389
AgeI ACCGGT 1 cut(s) 1854
AgsI TTSAA 7 cut(s) 751, 1018, 1109, 1139, 1346, 1765, 1870
AhlI ACTAGT 1 cut(s) 1807
AjnI CCWGG 4 cut(s) 1338, 1410, 1468, 1627
AjuI GAANNNNNNNTTGG 2 cut(s) 714, 746
AluBI AGCT 6 cut(s) 106, 237, 878, 1309, 1315, 1479
AluI AGCT 6 cut(s) 106, 237, 878, 1309, 1315, 1479
Alw21I GWGCWC 4 cut(s) 391, 790, 939, 1481
Alw26I GTCTC 3 cut(s) 562, 1037, 1515
Alw44I GTGCAC 1 cut(s) 786
AlwI GGATC 4 cut(s) 75, 1197, 1346, 1854
AoxI GGCC 6 cut(s) 130, 502, 1207, 1438, 1495, 1590
ApaLI GTGCAC 1 cut(s) 786
ApeKI GCWGC 3 cut(s) 185, 1089, 1610
ApoI RAATTY 2 cut(s) 228, 1500
ArsI GACNNNNNNTTYG 2 cut(s) 556, 588
AsiGI ACCGGT 1 cut(s) 1854
Asp700I GAANNNNTTC 1 cut(s) 1326
AspLEI GCGC 1 cut(s) 78
AspS9I GGNCC 2 cut(s) 261, 1438
AsuC2I CCSGG 1 cut(s) 698
AsuHPI GGTGA 4 cut(s) 115, 448, 817, 1331
AvaII GGWCC 1 cut(s) 261
BaeGI GKGCMC 1 cut(s) 790
BaeI ACNNNNGTAYC 2 cut(s) 1565, 1598
BalI TGGCCA 3 cut(s) 504, 1209, 1497
BanII GRGCYC 1 cut(s) 1481
Bbv12I GWGCWC 4 cut(s) 391, 790, 939, 1481
BbvCI CCTCAGC 1 cut(s) 142
BbvI GCAGC 3 cut(s) 172, 1101, 1597
BccI CCATC 7 cut(s) 95, 125, 183, 427, 572, 585, 850
BceAI ACGGC 2 cut(s) 307, 347
BcgI CGANNNNNNTGC 4 cut(s) 202, 236, 1637, 1671
BciT130I CCWGG 4 cut(s) 1340, 1412, 1470, 1629
BcnI CCSGG 1 cut(s) 698
BcoDI GTCTC 3 cut(s) 562, 1037, 1515
BcuI ACTAGT 1 cut(s) 1807
BfaI CTAG 2 cut(s) 1316, 1808
BfmI CTRYAG 1 cut(s) 1310
BfrI CTTAAG 1 cut(s) 1442
BfuAI ACCTGC 1 cut(s) 1733
BisI GCNGC 8 cut(s) 114, 130, 138, 186, 477, 1090, 1611, 1751
BlsI GCNGC 8 cut(s) 115, 131, 139, 187, 478, 1091, 1612, 1752
Bme1390I CCNGG 5 cut(s) 698, 1340, 1412, 1470, 1629
Bme18I GGWCC 1 cut(s) 261
BmgT120I GGNCC 2 cut(s) 261, 1438
BmrFI CCNGG 5 cut(s) 698, 1340, 1412, 1470, 1629
BmsI GCATC 2 cut(s) 307, 1455
BpmI CTGGAG 1 cut(s) 1539
Bpu10I CCTNAGC 1 cut(s) 142
BpuEI CTTGAG 1 cut(s) 1602
BpuMI CCSGG 1 cut(s) 698
BsaAI YACGTR 1 cut(s) 1775
BsaI GGTCTC 1 cut(s) 1037
BsaJI CCNNGG 5 cut(s) 94, 289, 363, 1300, 1627
BsaWI WCCGGW 1 cut(s) 1854
BsaXI ACNNNNNCTCC 4 cut(s) 333, 363, 789, 819
Bsc4I CCNNNNNNNGG 1 cut(s) 1417
Bse118I RCCGGY 2 cut(s) 1592, 1854
Bse1I ACTGG 3 cut(s) 263, 456, 505
Bse3DI GCAATG 3 cut(s) 478, 849, 996
BseBI CCWGG 4 cut(s) 1340, 1412, 1470, 1629
BseDI CCNNGG 5 cut(s) 94, 289, 363, 1300, 1627
BseGI GGATG 3 cut(s) 60, 583, 1570
BseLI CCNNNNNNNGG 1 cut(s) 1417
BseMI GCAATG 3 cut(s) 478, 849, 996
BseMII CTCAG 3 cut(s) 156, 627, 1110
BseNI ACTGG 3 cut(s) 263, 456, 505
BseRI GAGGAG 1 cut(s) 1685
BseSI GKGCMC 1 cut(s) 790
BseXI GCAGC 3 cut(s) 172, 1101, 1597
BseYI CCCAGC 2 cut(s) 233, 1223
Bsh1236I CGCG 2 cut(s) 43, 76
BshFI GGCC 6 cut(s) 132, 504, 1209, 1440, 1497, 1592
BshTI ACCGGT 1 cut(s) 1854
BsiHKAI GWGCWC 4 cut(s) 391, 790, 939, 1481
BsiSI CCGG 3 cut(s) 697, 1593, 1855
BslFI GGGAC 1 cut(s) 1586
BslI CCNNNNNNNGG 1 cut(s) 1417
BsmAI GTCTC 3 cut(s) 562, 1037, 1515
BsmFI GGGAC 1 cut(s) 1586
BsmI GAATGC 4 cut(s) 74, 973, 1248, 1326
BsnI GGCC 6 cut(s) 132, 504, 1209, 1440, 1497, 1592
Bso31I GGTCTC 1 cut(s) 1037
Bsp1286I GDGCHC 4 cut(s) 391, 790, 939, 1481
Bsp143I GATC 5 cut(s) 80, 807, 1189, 1351, 1846
Bsp19I CCATGG 1 cut(s) 1300
BspACI CCGC 5 cut(s) 114, 129, 138, 476, 1751
BspANI GGCC 6 cut(s) 132, 504, 1209, 1440, 1497, 1592
BspCNI CTCAG 3 cut(s) 155, 628, 1109
BspFNI CGCG 2 cut(s) 43, 76
BspMI ACCTGC 1 cut(s) 1733
BspPI GGATC 4 cut(s) 75, 1197, 1346, 1854
BspTI CTTAAG 1 cut(s) 1442
BspTNI GGTCTC 1 cut(s) 1037
BsrDI GCAATG 3 cut(s) 478, 849, 996
BsrFI RCCGGY 2 cut(s) 1592, 1854
BsrI ACTGG 3 cut(s) 263, 456, 505
BssAI RCCGGY 2 cut(s) 1592, 1854
BssECI CCNNGG 5 cut(s) 94, 289, 363, 1300, 1627
BssMI GATC 5 cut(s) 80, 807, 1189, 1351, 1846
BssT1I CCWWGG 1 cut(s) 1300
Bst2UI CCWGG 4 cut(s) 1340, 1412, 1470, 1629
Bst4CI ACNGT 5 cut(s) 253, 265, 568, 1700, 1790
Bst6I CTCTTC 4 cut(s) 328, 515, 717, 1212
BstAFI CTTAAG 1 cut(s) 1442
BstAPI GCANNNNNTGC 2 cut(s) 20, 206
BstBAI YACGTR 1 cut(s) 1775
BstC8I GCNNGC 9 cut(s) 74, 211, 239, 286, 296, 469, 1087, 1180, 1207
BstDEI CTNAG 5 cut(s) 142, 636, 977, 1096, 1161
BstDSI CCRYGG 3 cut(s) 289, 363, 1300
BstF5I GGATG 3 cut(s) 60, 583, 1570
BstFNI CGCG 2 cut(s) 43, 76
BstHHI GCGC 1 cut(s) 78
BstKTI GATC 5 cut(s) 83, 810, 1192, 1354, 1849
BstMAI GTCTC 3 cut(s) 562, 1037, 1515
BstMBI GATC 5 cut(s) 80, 807, 1189, 1351, 1846
BstMWI GCNNNNNNNGC 8 cut(s) 20, 143, 206, 285, 473, 510, 839, 1206
BstNI CCWGG 4 cut(s) 1340, 1412, 1470, 1629
BstNSI RCATGY 3 cut(s) 298, 892, 1393
BstSCI CCNGG 5 cut(s) 696, 1338, 1410, 1468, 1627
BstSFI CTRYAG 1 cut(s) 1310
BstSLI GKGCMC 1 cut(s) 790
BstSNI TACGTA 1 cut(s) 1775
BstUI CGCG 2 cut(s) 43, 76
BstV1I GCAGC 3 cut(s) 172, 1101, 1597
BstX2I RGATCY 2 cut(s) 1189, 1351
BstYI RGATCY 2 cut(s) 1189, 1351
BsuRI GGCC 6 cut(s) 132, 504, 1209, 1440, 1497, 1592
BtgI CCRYGG 3 cut(s) 289, 363, 1300
BtgZI GCGATG 1 cut(s) 935
BtsCI GGATG 3 cut(s) 60, 583, 1570
BtsI GCAGTG 3 cut(s) 18, 1068, 1300
BtsIMutI CAGTG 8 cut(s) 18, 249, 385, 463, 1068, 1300, 1519, 1705
BveI ACCTGC 1 cut(s) 1733
Cac8I GCNNGC 9 cut(s) 74, 211, 239, 286, 296, 469, 1087, 1180, 1207
CfoI GCGC 1 cut(s) 78
Cfr10I RCCGGY 2 cut(s) 1592, 1854
Cfr13I GGNCC 2 cut(s) 261, 1438
CsiI ACCWGGT 1 cut(s) 1338
Csp6I GTAC 1 cut(s) 946
CspAI ACCGGT 1 cut(s) 1854
CviQI GTAC 1 cut(s) 946
DdeI CTNAG 5 cut(s) 142, 636, 977, 1096, 1161
DpnI GATC 5 cut(s) 82, 809, 1191, 1353, 1848
DpnII GATC 5 cut(s) 80, 807, 1189, 1351, 1846
DrdI GACNNNNNNGTC 1 cut(s) 263
DseDI GACNNNNNNGTC 1 cut(s) 263
EaeI YGGCCR 4 cut(s) 502, 1207, 1495, 1590
Eam1104I CTCTTC 4 cut(s) 328, 515, 717, 1212
EarI CTCTTC 4 cut(s) 328, 515, 717, 1212
Ecl136II GAGCTC 1 cut(s) 1479
Eco105I TACGTA 1 cut(s) 1775
Eco130I CCWWGG 1 cut(s) 1300
Eco24I GRGCYC 1 cut(s) 1481
Eco31I GGTCTC 1 cut(s) 1037
Eco47I GGWCC 1 cut(s) 261
Eco53kI GAGCTC 1 cut(s) 1479
EcoICRI GAGCTC 1 cut(s) 1479
EcoO109I RGGNCCY 1 cut(s) 1438
EcoRII CCWGG 4 cut(s) 1338, 1410, 1468, 1627
EcoT14I CCWWGG 1 cut(s) 1300
EcoT22I ATGCAT 2 cut(s) 300, 996
EcoT38I GRGCYC 1 cut(s) 1481
ErhI CCWWGG 1 cut(s) 1300
FaqI GGGAC 1 cut(s) 1586
FblI GTMKAC 1 cut(s) 912
Fnu4HI GCNGC 8 cut(s) 114, 130, 138, 186, 477, 1090, 1611, 1751
FokI GGATG 3 cut(s) 47, 590, 1577
FriOI GRGCYC 1 cut(s) 1481
Fsp4HI GCNGC 8 cut(s) 114, 130, 138, 186, 477, 1090, 1611, 1751
FspBI CTAG 2 cut(s) 1316, 1808
GlaI GCGC 1 cut(s) 77
GluI GCNGC 8 cut(s) 114, 130, 138, 186, 477, 1090, 1611, 1751
GsaI CCCAGC 2 cut(s) 237, 1227
GsuI CTGGAG 1 cut(s) 1539
HaeIII GGCC 6 cut(s) 132, 504, 1209, 1440, 1497, 1592
HapII CCGG 3 cut(s) 697, 1593, 1855
HhaI GCGC 1 cut(s) 78
Hin6I GCGC 1 cut(s) 76
HinP1I GCGC 1 cut(s) 76
HincII GTYRAC 1 cut(s) 886
HindII GTYRAC 1 cut(s) 886
HinfI GANTC 2 cut(s) 149, 1132
HpaII CCGG 3 cut(s) 697, 1593, 1855
HphI GGTGA 4 cut(s) 115, 448, 817, 1331
Hpy166II GTNNAC 6 cut(s) 256, 352, 788, 886, 913, 1322
Hpy188I TCNGA 2 cut(s) 65, 1257
Hpy188III TCNNGA 4 cut(s) 795, 1098, 1136, 1829
Hpy8I GTNNAC 6 cut(s) 256, 352, 788, 886, 913, 1322
Hpy99I CGWCG 3 cut(s) 227, 359, 536
HpyAV CCTTC 7 cut(s) 433, 590, 695, 993, 1012, 1075, 1388
HpyCH4III ACNGT 5 cut(s) 253, 265, 568, 1700, 1790
HpyCH4IV ACGT 3 cut(s) 357, 402, 1774
HpyF10VI GCNNNNNNNGC 8 cut(s) 20, 143, 206, 285, 473, 510, 839, 1206
HpyF3I CTNAG 5 cut(s) 142, 636, 977, 1096, 1161
HpySE526I ACGT 3 cut(s) 357, 402, 1774
HspAI GCGC 1 cut(s) 76
Kzo9I GATC 5 cut(s) 80, 807, 1189, 1351, 1846
LmnI GCTCC 3 cut(s) 111, 177, 544
Lsp1109I GCAGC 3 cut(s) 172, 1101, 1597
LweI GCATC 2 cut(s) 307, 1455
MabI ACCWGGT 1 cut(s) 1338
MaeI CTAG 2 cut(s) 1316, 1808
MaeII ACGT 3 cut(s) 357, 402, 1774
MaeIII GTNAC 4 cut(s) 757, 958, 1153, 1527
MalI GATC 5 cut(s) 82, 809, 1191, 1353, 1848
MboI GATC 5 cut(s) 80, 807, 1189, 1351, 1846
MboII GAAGA 6 cut(s) 170, 345, 532, 704, 1184, 1229
MflI RGATCY 2 cut(s) 1189, 1351
MhlI GDGCHC 4 cut(s) 391, 790, 939, 1481
MlsI TGGCCA 3 cut(s) 504, 1209, 1497
MluCI AATT 4 cut(s) 228, 1423, 1500, 1833
MluNI TGGCCA 3 cut(s) 504, 1209, 1497
MlyI GAGTC 1 cut(s) 143
MmeI TCCRAC 2 cut(s) 1542, 1647
Mox20I TGGCCA 3 cut(s) 504, 1209, 1497
Mph1103I ATGCAT 2 cut(s) 300, 996
MroXI GAANNNNTTC 1 cut(s) 1326
MscI TGGCCA 3 cut(s) 504, 1209, 1497
MseI TTAA 3 cut(s) 462, 1061, 1443
MslI CAYNNNNRTG 3 cut(s) 303, 828, 920
Msp20I TGGCCA 3 cut(s) 504, 1209, 1497
MspA1I CMGCKG 1 cut(s) 129
MspCI CTTAAG 1 cut(s) 1442
MspI CCGG 3 cut(s) 697, 1593, 1855
MspR9I CCNGG 5 cut(s) 698, 1340, 1412, 1470, 1629
Mva1269I GAATGC 4 cut(s) 74, 973, 1248, 1326
MvaI CCWGG 4 cut(s) 1340, 1412, 1470, 1629
MvnI CGCG 2 cut(s) 43, 76
MwoI GCNNNNNNNGC 8 cut(s) 20, 143, 206, 285, 473, 510, 839, 1206
NciI CCSGG 1 cut(s) 698
NcoI CCATGG 1 cut(s) 1300
NdeII GATC 5 cut(s) 80, 807, 1189, 1351, 1846
NmeAIII GCCGAG 1 cut(s) 75
NmuCI GTSAC 3 cut(s) 757, 958, 1527
NsiI ATGCAT 2 cut(s) 300, 996
NspI RCATGY 3 cut(s) 298, 892, 1393
PaeI GCATGC 1 cut(s) 298
PciI ACATGT 2 cut(s) 888, 1389
PcsI WCGNNNNNNNCGW 1 cut(s) 360
PctI GAATGC 4 cut(s) 74, 973, 1248, 1326
PdmI GAANNNNTTC 1 cut(s) 1326
PfeI GAWTC 1 cut(s) 1132
PfoI TCCNGGA 1 cut(s) 696
PinAI ACCGGT 1 cut(s) 1854
PkrI GCNGC 8 cut(s) 115, 131, 139, 187, 478, 1091, 1612, 1752
PleI GAGTC 1 cut(s) 143
PpsI GAGTC 1 cut(s) 143
Ppu21I YACGTR 1 cut(s) 1775
PscI ACATGT 2 cut(s) 888, 1389
PsiI TTATAA 4 cut(s) 837, 1235, 1730, 1824
Psp124BI GAGCTC 1 cut(s) 1481
Psp1406I AACGTT 1 cut(s) 402
Psp6I CCWGG 4 cut(s) 1338, 1410, 1468, 1627
PspFI CCCAGC 2 cut(s) 233, 1223
PspGI CCWGG 4 cut(s) 1338, 1410, 1468, 1627
PspPI GGNCC 2 cut(s) 261, 1438
PsuI RGATCY 2 cut(s) 1189, 1351
RsaI GTAC 1 cut(s) 947
RsaNI GTAC 1 cut(s) 946
RseI CAYNNNNRTG 3 cut(s) 303, 828, 920
SacI GAGCTC 1 cut(s) 1481
SaqAI TTAA 3 cut(s) 462, 1061, 1443
SatI GCNGC 8 cut(s) 114, 130, 138, 186, 477, 1090, 1611, 1751
Sau3AI GATC 5 cut(s) 80, 807, 1189, 1351, 1846
Sau96I GGNCC 2 cut(s) 261, 1438
SchI GAGTC 1 cut(s) 143
ScrFI CCNGG 5 cut(s) 698, 1340, 1412, 1470, 1629
SduI GDGCHC 4 cut(s) 391, 790, 939, 1481
SexAI ACCWGGT 1 cut(s) 1338
SfaNI GCATC 2 cut(s) 307, 1455
SfcI CTRYAG 1 cut(s) 1310
SinI GGWCC 1 cut(s) 261
SmiMI CAYNNNNRTG 3 cut(s) 303, 828, 920
SmlI CTYRAG 2 cut(s) 1442, 1617
SmoI CTYRAG 2 cut(s) 1442, 1617
SnaBI TACGTA 1 cut(s) 1775
SpeI ACTAGT 1 cut(s) 1807
SphI GCATGC 1 cut(s) 298
Sse9I AATT 4 cut(s) 228, 1423, 1500, 1833
SsiI CCGC 5 cut(s) 114, 129, 138, 476, 1751
SspMI CTAG 2 cut(s) 1316, 1808
SstI GAGCTC 1 cut(s) 1481
StyD4I CCNGG 5 cut(s) 696, 1338, 1410, 1468, 1627
StyI CCWWGG 1 cut(s) 1300
TaaI ACNGT 5 cut(s) 253, 265, 568, 1700, 1790
TaiI ACGT 3 cut(s) 360, 405, 1777
TaqI TCGA 4 cut(s) 90, 222, 531, 1828
TasI AATT 4 cut(s) 228, 1423, 1500, 1833
TatI WGTACW 1 cut(s) 945
TauI GCSGC 5 cut(s) 116, 132, 140, 479, 1753
TfiI GAWTC 1 cut(s) 1132
Tru1I TTAA 3 cut(s) 462, 1061, 1443
Tru9I TTAA 3 cut(s) 462, 1061, 1443
TscAI CASTG 8 cut(s) 25, 256, 385, 463, 1075, 1300, 1519, 1705
TseFI GTSAC 3 cut(s) 757, 958, 1527
TseI GCWGC 3 cut(s) 185, 1089, 1610
Tsp45I GTSAC 3 cut(s) 757, 958, 1527
TspGWI ACGGA 1 cut(s) 41
TspRI CASTG 8 cut(s) 25, 256, 385, 463, 1075, 1300, 1519, 1705
Vha464I CTTAAG 1 cut(s) 1442
VneI GTGCAC 1 cut(s) 786
VpaK11BI GGWCC 1 cut(s) 261
XapI RAATTY 2 cut(s) 228, 1500
XceI RCATGY 3 cut(s) 298, 892, 1393
XmiI GTMKAC 1 cut(s) 912
XmnI GAANNNNTTC 1 cut(s) 1326
XspI CTAG 2 cut(s) 1316, 1808
Zsp2I ATGCAT 2 cut(s) 300, 996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.