Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000048

Physical Location & Seq

Genomic Coordinates Forward (+)

82028508 .. 82045673

Gene Structure 17166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G054370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3690 bp

ATGGGACACGTTACTCCGTTCTTACTTCTTTCACTTATACTACTGTCAGGAACAGTTGCACTTTCTTTCGGCAACGCAGATCCTAATGTGGGTTGCATGGATATCGAGAGGAAAGCCCTTCTGAAGCTCAGAGAGGGCCTTACTGATCCTTCAGACCAGCTTTCGTCTTGGGTTGGAGTGAATTGCTGCAAATGGAGAGGTATAGGCTGCAACGAGACGACTGGACGTGTGGACAGCCTTAATCTTCGCAACCCGAGTGATGATAGAATGCTCCATGCATTAGGAGGTGAGATCAATCCTTCTTTGCTTGTTTTGAAAGATTTGCTTTACTTGGATTTGAGCATGAATAACTTCGGAGGTCTAGAACTTCCAAGTTTCATTGGATTACTAGAAAAAATGATGTACCTCAATCTATCTGGTGCATCTTTTGGTGGAATAATTCCCGCCAATCTTGGAAACCTTTCAAAATTGCTTCATCTTGATCTCAGTAATAATGCTATTGAGAGTGATCTCAGATGGCTTCCCAGTCTTTCTTCCTTACAGTTTCTTCACTTGGGAGGAGCAGACCTTACCAAGGCTGCACCATATTGGCTTCCCACTGTTAACATGCTCCCTTCACTTCTTGAATTGCATTTGCCTGGTTGTGGACTGTCCATCCTTCCTCCTACTCTTCCACATATCAATTTCACATCACTATCGGTTCTTAACCTATCTGCCAATGGTTTCAACTCCACACTTTCTCCCTGGTTGTTCAATCTGACTCAACTAGTCAATCTTGATCTAAGTTCGAACAATCTGAATGGAGAACTTCCAGAAACACTAGGGAGTTTGACTCATTTGAAGAACCTTGATTTGTCGGAGAATTCAGATATTGGAGGTCAGTTGCCGAGAAACTTGGGGATGCTATGCAATTTGCAGTCTCTTAAACTTTCAATCAACAAAGTTACTGGTGACATAACTGAGTTCATTGATAGTATGTCTAGATGCACAAACAACAGCTTAGAGAGGTTGGATTTAGGTTTTAACAGTCTCACAGGAAATTTGCCTAATTCATTGGGACTTCTTAAGAAGTTAAGATTCCTCAAGTTGTGGCACAACTCATTTCAGGGTTCAATCCCAGAATCTATTGGAAACTTGACATCTTTGGAGGACTTTTACCTTGCACAGAATAAAATGGGTGGAGTCATCCCAGAAAGTTTTGGGCAGCTCTCATCCCTCGTTGCAGTAGATCTCTCTGAAAACACATGGGAAGGTGTTGTAACAGAAGCTCATTTTCTGAAACTTCGAAGCTTAGAAGAGGTGGCAATCCAGAAAGCCTCCCCAAACATTTCCCTAGTTTTCAACATTAGTTCTAAATGGATTCCTCCTTTCAAATTGACATACTTATACCTTAGATCATGTCAACTGGGTCCCAAATTTCCTGCATGGCTTAGAAATCAGACTGAGCTTGTCACGGTGGTCCTCAATAATGCTAGGATTGCAGATTCCATACCAGATTGGTTTTGGCAGTTAGATTTGTTATTAGATGAACTAGATGTTGCTTACAATCAACTAACCGGCAAGGTGCCTAACTCGTTAAGGTTCAGCAATCTTGCTAATGCTGATTTGAGTTCAAACCACTTTGAGGGTCCCCTCCCACTTTGGTCACCAAACATTACAACACTCTACCTCAGGGATAATCAGTTTTCAGGGCCAATTCCTTCAAACATTGGTGACGTGATGCCCTCCTTGACTGATTTAGACATATCAAGGAACGGTTTGAGTGGAAGCATTCCCCTGTCTTTTGGTAATCTAAGCATGTTGACAACCATGGTTCTCTCAAATAATTACTTGTCTGGTGAAATTCCTCATTTCTGGAACAGTATACCAGACTTGTATATTGTAGATATGTCAAACAACAGTCTCTCTGGTACAATTCCAAGATCCATGGATTCTCTTATTTCACTAAGATACTTGATACTCTCTAGTAACAACTTGTCAGGCGAACTTCCTTCACTGAGAAACTGCAATGGCATGAAGAGTCTTGATCTTGGGGATAATAAGTTCTTTGGAAACATTCCGGCGTGGATAGGAGAAAGCATGCTCTCTTTATTGATTTTACGCTTGAGTTCCAACTCATTCACCGGAAGCATTCCTTCACAGTTGTGTGATGGTTTGGACGGGGATGATGGAGCACTGCATGCTTTAGGTGGTGAGATCAAATCTTCTTTGCTTGTTTTGAAAAATTTGATTTACTTGGACTTGAGCATGAATAACTTTGGAGGTGTCAAACTTCCAAGTTTCATTGGATCACTAGAGAAACTGACATACCTTAATCTTTCTGGTGCATCTTTTGGTGGAGTCATTTGCCCCAATTTTGGAAACCTGTCAAGGTTGCTTTGTCTTGATCTAAGTAACAACCTTGTTGAGAGTGATCTCAGATGGCTTTCCAGTCTTTCTTCCTTACAGTTTTTTAACTTGGGAGGAGCAGACCTTACCAAGGCTGCACCATATTGGCTTCCCACTGTTAATATGCTCCCTTCACTTCTTGAATTGCATTTGCCTGGTTGTGGACTTTCCATCCTTCCTCCTACTCTTCCTCATATAAATTTCACATCACTATCGGTTCTTGACCTATCTGCCAATGGTTTCAACACCACACTTTCTCCCTGGTTGTTCAATCTGACTCAACTAGTCAATCTTGATCTAAGTTTGACCGATCTGAATGGAGAACTTCCAGAAACACTAGGGAGTTTGACTCATTTGAAGAACCTTGATTTGTCAGAGAATTCAGATATTGGAGGTCAGTTGCCGAGAAACTTGGGGATGCTATGCAATTTGCAATCTCTTAAACTTTCAATCAACAAAGTTACTGGTGAGATGACTGAGTTCATTGATTGTATGTCTAGATGCACAAACAGCAGCTTAGAGAGGTTGGATTTAGGTTTTAACAGTCTCACAGGAAATTTGCCTAATTCATTGGGACTTCTTAAGAAGTTAAGATTCCTCAAGTTGTGGCACAACTCATTTCAGGGTTCAATCCCAGAATCTATTGGAAACTTGACATCTTTGGAGGACTTTTACCTTGCACAGAATCAAATGAGTGGAGTCATCTCAGAAATTCGAACCTGTTTAAAGGCCCCCTCCCACTCTGGTCACCTAACATTACAACACTCTACCTCAGGGATAATCAGTTTTCACGTTTTAGGGCCAATTCCTTCGAACATTGGTGACGTGATGCCCTCCTTGTCCAATTTAGACAACTCATGGAACGGTTTGAGTGGAATCATTCCCCTGTCTTTAGGTAATCTAAGCATGTTGACAACCATGGTTCTCTCAAATAATTATTTGTCTGGTGAAATTCCTCATTTCTGGAACAGTATACCAGACTTGTATATTGTAGATATGTCAAACAACAGTCTCTCTGGCAATGATGCTCTTTGTGGGTATCCATTACTAACTGATTGCCAATGCGATGAACCTCCTCAGCTTCCAAGTGAAGATGGTGAAGAAGATGACAGCAAGCTATGGTTAATCATCAGCATGGTGATAGGTTTCATTACAGGGTTCTGGGGAGTTTTTGGGAGTTTGGTCATCAAGAAGTCGTGGAGATATGCATATTTTCAGTTCCTTGACAAAATAAAATATGCTCTTCTTGATTTTATCTCATCCATGGGCAAGCATATGCGGAGGAATGCAGATGAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

1229

Amino Acids

134.46

Weight (kDa)

4.96

Isoelectric Point (pI)

39.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	36 - 71	2.2e-10	Leucine rich repeat N-terminal domain
LRR_14	PF23598	163 - 316	3.6e-07	Leucine-rich repeat region
LRR_14	PF23598	333 - 481	1.2e-10	Leucine-rich repeat region
LRR_8	PF13855	361 - 414	8e-06	Leucine rich repeat
LRR_14	PF23598	844 - 961	4.5e-06	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0000048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34930
fragaria_vesca	FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica	MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica	Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis	pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis	RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata	RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora	Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii	Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa	Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha	Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana	Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1564
AccI	GTMKAC	2 cut(s)	1864, 3361
AciI	CCGC	2 cut(s)	444, 3667
AclWI	GGATC	4 cut(s)	74, 140, 1917, 2296
AcuI	CTGAAG	2 cut(s)	135, 143
AfaI	GTAC	2 cut(s)	404, 1912
AfiI	CCNNNNNNNGG	7 cut(s)	89, 574, 644, 1624, 2357, 2479, 2549
AflII	CTTAAG	2 cut(s)	1064, 2969
AflIII	ACRYGT	2 cut(s)	7, 226
AhlI	ACTAGT	2 cut(s)	766, 2671
AjiI	CACGTC	3 cut(s)	227, 1717, 3214
AjnI	CCWGG	4 cut(s)	637, 743, 2542, 2648
AleI	CACNNNNGTG	1 cut(s)	2143
AloI	GAACNNNNNNTCC	2 cut(s)	2027, 2059
Alw21I	GWGCWC	1 cut(s)	2176
Alw26I	GTCTC	6 cut(s)	209, 924, 1034, 1907, 2939, 3404
AlwI	GGATC	4 cut(s)	74, 140, 1917, 2296
Ama87I	CYCGRG	1 cut(s)	253
AoxI	GGCC	4 cut(s)	136, 1691, 3117, 3188
ApeKI	GCWGC	6 cut(s)	186, 207, 578, 1204, 2483, 2901
Asp700I	GAANNNNTTC	2 cut(s)	350, 460
AspS9I	GGNCC	7 cut(s)	136, 1409, 1459, 1628, 1691, 3118, 3188
AsuII	TTCGAA	4 cut(s)	788, 1285, 3103, 3200
AvaI	CYCGRG	1 cut(s)	253
AvaII	GGWCC	3 cut(s)	1409, 1459, 1628
AxyI	CCTNAGG	2 cut(s)	1670, 3160
BanI	GGYRCC	1 cut(s)	1564
Bbv12I	GWGCWC	1 cut(s)	2176
BbvCI	CCTCAGC	1 cut(s)	3465
BbvI	GCAGC	6 cut(s)	173, 194, 565, 1216, 2470, 2913
BccI	CCATC	7 cut(s)	510, 662, 2144, 2162, 2415, 2567, 3476
BcgI	CGANNNNNNTGC	2 cut(s)	85, 119
BciT130I	CCWGG	4 cut(s)	639, 745, 2544, 2650
BciVI	GTATCC	1 cut(s)	3438
BcoDI	GTCTC	6 cut(s)	209, 924, 1034, 1907, 2939, 3404
BcuI	ACTAGT	2 cut(s)	766, 2671
BfrI	CTTAAG	2 cut(s)	1064, 2969
BfuI	GTATCC	1 cut(s)	3438
BglII	AGATCT	1 cut(s)	1228
BisI	GCNGC	6 cut(s)	187, 208, 579, 1205, 2484, 2902
BlsI	GCNGC	6 cut(s)	188, 209, 580, 1206, 2485, 2903
Bme1390I	CCNGG	4 cut(s)	639, 745, 2544, 2650
Bme18I	GGWCC	3 cut(s)	1409, 1459, 1628
BmeT110I	CYCGRG	1 cut(s)	253
BmgBI	CACGTC	3 cut(s)	227, 1717, 3214
BmgT120I	GGNCC	7 cut(s)	136, 1409, 1459, 1628, 1691, 3118, 3188
BmiI	GGNNCC	6 cut(s)	1410, 1411, 1566, 1629, 1630, 3120
BmrFI	CCNGG	4 cut(s)	639, 745, 2544, 2650
BmrI	ACTGGG	2 cut(s)	519, 1415
BmsI	GCATC	9 cut(s)	431, 891, 974, 1710, 2336, 2796, 2879, 3207, 3403
BmuI	ACTGGG	2 cut(s)	519, 1415
BplI	GAGNNNNNCTC	4 cut(s)	817, 849, 2722, 2754
Bpu10I	CCTNAGC	1 cut(s)	3465
Bpu14I	TTCGAA	4 cut(s)	788, 1285, 3103, 3200
BpuEI	CTTGAG	4 cut(s)	1067, 2125, 2263, 2972
BsaJI	CCNNGG	8 cut(s)	573, 743, 1809, 1926, 2478, 2648, 3306, 3651
BsaWI	WCCGGW	1 cut(s)	2123
BsaXI	ACNNNNNCTCC	4 cut(s)	724, 754, 2629, 2659
Bsc4I	CCNNNNNNNGG	7 cut(s)	89, 574, 644, 1624, 2357, 2479, 2549
Bse118I	RCCGGY	1 cut(s)	1556
Bse1I	ACTGG	6 cut(s)	226, 525, 952, 1410, 2430, 2857
Bse21I	CCTNAGG	2 cut(s)	1670, 3160
Bse3DI	GCAATG	2 cut(s)	2014, 3415
BseBI	CCWGG	4 cut(s)	639, 745, 2544, 2650
BseDI	CCNNGG	8 cut(s)	573, 743, 1809, 1926, 2478, 2648, 3306, 3651
BseGI	GGATG	8 cut(s)	654, 906, 1185, 1211, 2170, 2559, 2811, 3647
BseLI	CCNNNNNNNGG	7 cut(s)	89, 574, 644, 1624, 2357, 2479, 2549
BseMI	GCAATG	2 cut(s)	2014, 3415
BseNI	ACTGG	6 cut(s)	226, 525, 952, 1410, 2430, 2857
BseRI	GAGGAG	3 cut(s)	573, 2478, 3453
BseXI	GCAGC	6 cut(s)	173, 194, 565, 1216, 2470, 2913
BsgI	GTGCAG	2 cut(s)	564, 2469
BshFI	GGCC	4 cut(s)	138, 1693, 3119, 3190
BshNI	GGYRCC	1 cut(s)	1564
BsiHKAI	GWGCWC	1 cut(s)	2176
BsiHKCI	CYCGRG	1 cut(s)	253
BsiSI	CCGG	3 cut(s)	1557, 2060, 2124
BslFI	GGGAC	5 cut(s)	18, 1071, 1395, 1614, 2976
BslI	CCNNNNNNNGG	7 cut(s)	89, 574, 644, 1624, 2357, 2479, 2549
BsmAI	GTCTC	6 cut(s)	209, 924, 1034, 1907, 2939, 3404
BsmBI	CGTCTC	1 cut(s)	209
BsmFI	GGGAC	5 cut(s)	18, 1071, 1395, 1614, 2976
BsmI	GAATGC	4 cut(s)	273, 1770, 2130, 3679
BsnI	GGCC	4 cut(s)	138, 1693, 3119, 3190
BsoBI	CYCGRG	1 cut(s)	253
Bsp119I	TTCGAA	4 cut(s)	788, 1285, 3103, 3200
Bsp1286I	GDGCHC	1 cut(s)	2176
Bsp19I	CCATGG	4 cut(s)	1809, 1926, 3306, 3651
BspACI	CCGC	2 cut(s)	444, 3667
BspANI	GGCC	4 cut(s)	138, 1693, 3119, 3190
BspLI	GGNNCC	6 cut(s)	1410, 1411, 1566, 1629, 1630, 3120
BspPI	GGATC	4 cut(s)	74, 140, 1917, 2296
BspQI	GCTCTTC	1 cut(s)	3636
BspT104I	TTCGAA	4 cut(s)	788, 1285, 3103, 3200
BspT107I	GGYRCC	1 cut(s)	1564
BspTI	CTTAAG	2 cut(s)	1064, 2969
BsrDI	GCAATG	2 cut(s)	2014, 3415
BsrFI	RCCGGY	1 cut(s)	1556
BsrI	ACTGG	6 cut(s)	226, 525, 952, 1410, 2430, 2857
BssAI	RCCGGY	1 cut(s)	1556
BssECI	CCNNGG	8 cut(s)	573, 743, 1809, 1926, 2478, 2648, 3306, 3651
BssNAI	GTATAC	2 cut(s)	1865, 3362
BssT1I	CCWWGG	6 cut(s)	573, 1809, 1926, 2478, 3306, 3651
Bst1107I	GTATAC	2 cut(s)	1865, 3362
Bst2UI	CCWGG	4 cut(s)	639, 745, 2544, 2650
Bst6I	CTCTTC	5 cut(s)	675, 1290, 2012, 2580, 3636
BstAFI	CTTAAG	2 cut(s)	1064, 2969
BstAPI	GCANNNNNTGC	1 cut(s)	2180
BstBI	TTCGAA	4 cut(s)	788, 1285, 3103, 3200
BstC8I	GCNNGC	4 cut(s)	2081, 2181, 3503, 3659
BstDSI	CCRYGG	4 cut(s)	1809, 1926, 3306, 3651
BstEII	GGTNACC	2 cut(s)	1644, 3134
BstENI	CCTNNNNNAGG	2 cut(s)	572, 2477
BstF5I	GGATG	8 cut(s)	654, 906, 1185, 1211, 2170, 2559, 2811, 3647
BstMAI	GTCTC	6 cut(s)	209, 924, 1034, 1907, 2939, 3404
BstMWI	GCNNNNNNNGC	3 cut(s)	1478, 2180, 2898
BstNI	CCWGG	4 cut(s)	639, 745, 2544, 2650
BstNSI	RCATGY	5 cut(s)	610, 1801, 2083, 2183, 3298
BstPI	GGTNACC	2 cut(s)	1644, 3134
BstSCI	CCNGG	4 cut(s)	637, 743, 2542, 2648
BstV1I	GCAGC	6 cut(s)	173, 194, 565, 1216, 2470, 2913
BstX2I	RGATCY	3 cut(s)	79, 1228, 1922
BstYI	RGATCY	3 cut(s)	79, 1228, 1922
BstZ17I	GTATAC	2 cut(s)	1865, 3362
Bsu36I	CCTNAGG	2 cut(s)	1670, 3160
BsuI	GTATCC	1 cut(s)	3438
BsuRI	GGCC	4 cut(s)	138, 1693, 3119, 3190
BtgI	CCRYGG	4 cut(s)	1809, 1926, 3306, 3651
BtgZI	GCGATG	1 cut(s)	3468
BtrI	CACGTC	3 cut(s)	227, 1717, 3214
BtsCI	GGATG	8 cut(s)	654, 906, 1185, 1211, 2170, 2559, 2811, 3647
BtsI	GCAGTG	1 cut(s)	2174
BtsIMutI	CAGTG	4 cut(s)	597, 1994, 2174, 2502
Cac8I	GCNNGC	4 cut(s)	2081, 2181, 3503, 3659
Cfr10I	RCCGGY	1 cut(s)	1556
Cfr13I	GGNCC	7 cut(s)	136, 1409, 1459, 1628, 1691, 3118, 3188
Csp6I	GTAC	2 cut(s)	403, 1911
CviQI	GTAC	2 cut(s)	403, 1911
DraI	TTTAAA	1 cut(s)	3114
Eam1104I	CTCTTC	5 cut(s)	675, 1290, 2012, 2580, 3636
EarI	CTCTTC	5 cut(s)	675, 1290, 2012, 2580, 3636
Eco130I	CCWWGG	6 cut(s)	573, 1809, 1926, 2478, 3306, 3651
Eco32I	GATATC	1 cut(s)	103
Eco47I	GGWCC	3 cut(s)	1409, 1459, 1628
Eco57I	CTGAAG	2 cut(s)	135, 143
Eco81I	CCTNAGG	2 cut(s)	1670, 3160
Eco88I	CYCGRG	1 cut(s)	253
Eco91I	GGTNACC	2 cut(s)	1644, 3134
EcoNI	CCTNNNNNAGG	2 cut(s)	572, 2477
EcoO109I	RGGNCCY	4 cut(s)	136, 1409, 1628, 3118
EcoO65I	GGTNACC	2 cut(s)	1644, 3134
EcoRI	GAATTC	2 cut(s)	862, 2767
EcoRII	CCWGG	4 cut(s)	637, 743, 2542, 2648
EcoRV	GATATC	1 cut(s)	103
EcoT14I	CCWWGG	6 cut(s)	573, 1809, 1926, 2478, 3306, 3651
EcoT22I	ATGCAT	2 cut(s)	280, 3598
ErhI	CCWWGG	6 cut(s)	573, 1809, 1926, 2478, 3306, 3651
Esp3I	CGTCTC	1 cut(s)	209
FalI	AAGNNNNNCTT	4 cut(s)	309, 341, 2119, 2151
FaqI	GGGAC	5 cut(s)	18, 1071, 1395, 1614, 2976
FauI	CCCGC	1 cut(s)	451
FauNDI	CATATG	1 cut(s)	3663
FblI	GTMKAC	2 cut(s)	1864, 3361
Fnu4HI	GCNGC	6 cut(s)	187, 208, 579, 1205, 2484, 2902
FokI	GGATG	8 cut(s)	641, 913, 1172, 1198, 2177, 2546, 2818, 3634
Fsp4HI	GCNGC	6 cut(s)	187, 208, 579, 1205, 2484, 2902
GluI	GCNGC	6 cut(s)	187, 208, 579, 1205, 2484, 2902
HaeIII	GGCC	4 cut(s)	138, 1693, 3119, 3190
HapII	CCGG	3 cut(s)	1557, 2060, 2124
HincII	GTYRAC	4 cut(s)	604, 1403, 1803, 3300
HindII	GTYRAC	4 cut(s)	604, 1403, 1803, 3300
HindIII	AAGCTT	1 cut(s)	1288
HpaI	GTTAAC	1 cut(s)	604
HpaII	CCGG	3 cut(s)	1557, 2060, 2124
Hpy166II	GTNNAC	9 cut(s)	232, 604, 647, 1403, 1803, 1865, 2552, 3300, 3362
Hpy8I	GTNNAC	9 cut(s)	232, 604, 647, 1403, 1803, 1865, 2552, 3300, 3362
HpyCH4IV	ACGT	5 cut(s)	9, 226, 1716, 3180, 3213
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1478, 2180, 2898
HpySE526I	ACGT	5 cut(s)	9, 226, 1716, 3180, 3213
KflI	GGGWCCC	2 cut(s)	1409, 1628
KspAI	GTTAAC	1 cut(s)	604
LguI	GCTCTTC	1 cut(s)	3636
LmnI	GCTCC	6 cut(s)	276, 560, 615, 2171, 2465, 2520
Lsp1109I	GCAGC	6 cut(s)	173, 194, 565, 1216, 2470, 2913
LweI	GCATC	9 cut(s)	431, 891, 974, 1710, 2336, 2796, 2879, 3207, 3403
MaeII	ACGT	5 cut(s)	9, 226, 1716, 3180, 3213
MflI	RGATCY	3 cut(s)	79, 1228, 1922
MhlI	GDGCHC	1 cut(s)	2176
MlyI	GAGTC	8 cut(s)	754, 826, 1191, 2029, 2349, 2659, 2731, 3096
MmeI	TCCRAC	5 cut(s)	154, 837, 990, 2136, 2895
Mph1103I	ATGCAT	2 cut(s)	280, 3598
MroXI	GAANNNNTTC	2 cut(s)	350, 460
MslI	CAYNNNNRTG	2 cut(s)	2143, 3521
MspCI	CTTAAG	2 cut(s)	1064, 2969
MspI	CCGG	3 cut(s)	1557, 2060, 2124
MspR9I	CCNGG	4 cut(s)	639, 745, 2544, 2650
Mva1269I	GAATGC	4 cut(s)	273, 1770, 2130, 3679
MvaI	CCWGG	4 cut(s)	639, 745, 2544, 2650
MwoI	GCNNNNNNNGC	3 cut(s)	1478, 2180, 2898
NcoI	CCATGG	4 cut(s)	1809, 1926, 3306, 3651
NdeI	CATATG	1 cut(s)	3663
NlaIV	GGNNCC	6 cut(s)	1410, 1411, 1566, 1629, 1630, 3120
NmeAIII	GCCGAG	2 cut(s)	912, 2817
NmuCI	GTSAC	6 cut(s)	950, 1450, 1644, 1712, 3134, 3209
NsiI	ATGCAT	2 cut(s)	280, 3598
NspI	RCATGY	5 cut(s)	610, 1801, 2083, 2183, 3298
NspV	TTCGAA	4 cut(s)	788, 1285, 3103, 3200
OliI	CACNNNNGTG	1 cut(s)	2143
PaeI	GCATGC	2 cut(s)	2083, 2183
PciSI	GCTCTTC	1 cut(s)	3636
PctI	GAATGC	4 cut(s)	273, 1770, 2130, 3679
PdmI	GAANNNNTTC	2 cut(s)	350, 460
PfeI	GAWTC	9 cut(s)	1077, 1121, 1360, 1484, 1931, 2982, 3026, 3073, 3264
PkrI	GCNGC	6 cut(s)	188, 209, 580, 1206, 2485, 2903
PleI	GAGTC	8 cut(s)	754, 826, 1190, 2028, 2348, 2659, 2731, 3095
PpsI	GAGTC	8 cut(s)	754, 826, 1190, 2028, 2348, 2659, 2731, 3095
PpuMI	RGGWCCY	2 cut(s)	1409, 1628
Psp5II	RGGWCCY	2 cut(s)	1409, 1628
Psp6I	CCWGG	4 cut(s)	637, 743, 2542, 2648
PspEI	GGTNACC	2 cut(s)	1644, 3134
PspGI	CCWGG	4 cut(s)	637, 743, 2542, 2648
PspN4I	GGNNCC	6 cut(s)	1410, 1411, 1566, 1629, 1630, 3120
PspPI	GGNCC	7 cut(s)	136, 1409, 1459, 1628, 1691, 3118, 3188
PspPPI	RGGWCCY	2 cut(s)	1409, 1628
PsuI	RGATCY	3 cut(s)	79, 1228, 1922
RsaI	GTAC	2 cut(s)	404, 1912
RsaNI	GTAC	2 cut(s)	403, 1911
RseI	CAYNNNNRTG	2 cut(s)	2143, 3521
SapI	GCTCTTC	1 cut(s)	3636
SatI	GCNGC	6 cut(s)	187, 208, 579, 1205, 2484, 2902
Sau96I	GGNCC	7 cut(s)	136, 1409, 1459, 1628, 1691, 3118, 3188
SchI	GAGTC	8 cut(s)	754, 826, 1191, 2029, 2349, 2659, 2731, 3096
ScrFI	CCNGG	4 cut(s)	639, 745, 2544, 2650
SduI	GDGCHC	1 cut(s)	2176
SfaNI	GCATC	9 cut(s)	431, 891, 974, 1710, 2336, 2796, 2879, 3207, 3403
SfuI	TTCGAA	4 cut(s)	788, 1285, 3103, 3200
SinI	GGWCC	3 cut(s)	1409, 1459, 1628
SmiMI	CAYNNNNRTG	2 cut(s)	2143, 3521
SmlI	CTYRAG	6 cut(s)	1064, 1082, 2104, 2242, 2969, 2987
SmoI	CTYRAG	6 cut(s)	1064, 1082, 2104, 2242, 2969, 2987
SpeI	ACTAGT	2 cut(s)	766, 2671
SphI	GCATGC	2 cut(s)	2083, 2183
SsiI	CCGC	2 cut(s)	444, 3667
StyD4I	CCNGG	4 cut(s)	637, 743, 2542, 2648
StyI	CCWWGG	6 cut(s)	573, 1809, 1926, 2478, 3306, 3651
TaiI	ACGT	5 cut(s)	12, 229, 1719, 3183, 3216
TaqI	TCGA	5 cut(s)	105, 788, 1285, 3103, 3200
TaqII	GACCGA	1 cut(s)	2711
TfiI	GAWTC	9 cut(s)	1077, 1121, 1360, 1484, 1931, 2982, 3026, 3073, 3264
TscAI	CASTG	4 cut(s)	604, 2001, 2181, 2509
TseFI	GTSAC	6 cut(s)	950, 1450, 1644, 1712, 3134, 3209
TseI	GCWGC	6 cut(s)	186, 207, 578, 1204, 2483, 2901
Tsp45I	GTSAC	6 cut(s)	950, 1450, 1644, 1712, 3134, 3209
TspGWI	ACGGA	1 cut(s)	6
TspRI	CASTG	4 cut(s)	604, 2001, 2181, 2509
Vha464I	CTTAAG	2 cut(s)	1064, 2969
VpaK11BI	GGWCC	3 cut(s)	1409, 1459, 1628
XagI	CCTNNNNNAGG	2 cut(s)	572, 2477
XbaI	TCTAGA	3 cut(s)	361, 980, 2885
XceI	RCATGY	5 cut(s)	610, 1801, 2083, 2183, 3298
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1500
XmiI	GTMKAC	2 cut(s)	1864, 3361
XmnI	GAANNNNTTC	2 cut(s)	350, 460
Zsp2I	ATGCAT	2 cut(s)	280, 3598

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.