RchiOBHm_Chr3g0480881

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
26810688 .. 26813726
3039 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44588

Sequence Viewer

Length: 3039 bp
ATGGGTACCTGTGCTCACTGGTTAACCCTTTTGTTTTTGGCCTCTTCATTTCTACATATCACTAAACCCTGTTTGGCTGATGGAGCTCCAGGAAGTGTGAAATCATGCATTGAGGAAGAGAGACGCGCCCTTTTAAGCTTTAAAGAAGATGTCACTGATCCTTCTGGTAGGCTTTCTTCTTGGGTGGGTTACGATTGTTGTCACTGGAAAGGAATCTCATGCGACAATAGTACGGGTCATATTGCAAAGATGGACCTCCGGAATACATATCCAGTTCCATATGCAGTTACATATCCATATTCCATGTATAATAATGGATCGGACCGGCAGAAGTTGGCTTATAAACGGTCTTGCATGGGAGGTAAGATTAATCATTCTTTGCTTAGCTTGAAGCATTTATATTACCTAGATCTGAGCTTGAATGACTTTGGAGGGATTCAAATTCCGAAGTTCTTTGGACAGCTTAAAAGTTTGAGGTATCTCAATCTCTCCATGACATCGTTGCAGTCATTTGGTGGAGAGATTCCCCCTCATCTTGGTAACTTGTCAAACTTGAAATATCTTGACATTGGTCAAAATTTCTACGAAATATATTTCGGACTAGACTTGAATAGGCTGTCTTCCAAAAACTTGAATTGGGTTTCTCATCTCTCTTCCCTAAGATACCTCAATCTCAACGGACTGAATCTTAGCACTGGAGGAGTAAGTTGGCTACATGCTGTTAACATGCTTTCTTCATTGGTAGAGTTGCATTTATCTTCATGCGAAATAGGAGAGAACCTTCCACTCTCATTGAAAACCAATAACCTCACATCACTTTTGGTTTTTGATATTTCACATAGTTTTATTTATTCTTTGTTTCCTAGCTGGTTTTTCAATCTCACCAGTCTCACAAAATTCAACCTAAGGGAGAACTATTTCATTGGTCCTTTTCCTGATGAATTCTCAAACCTCAAGTCTCTGGAATACCTTGATCTATCGAGTACTGGACTCAAAGGTCGAATTCCCAAACTCATTGGAAACTTTTGCAAGCTAAGGATATTAAACCTTGCTGAAAACAAATTGGATGGGGGTGTTGAAGAACTTCTGTCTGTTTTCTCATATTGTACAGAGAGTACATTGCAGTCCCTAGATTTGTCTTCTAATGAGATGATGAGCGAACTACCAACCTCTATTGGAATGCCAAAAATTCTGCAGTACCTTTACCTGAGCGGCAACCGCTTTTGGGGCTCAATTCCAGAATCCATTGGAAACTTGTCATCATTGAGAGCACTGGACCTCAGTAGTAATGATATGAATGGGTCCATTCCTGAAAGTTTAGGACAACTCTCTCAATTAGTTGACCTAGATCTGTCAGGGAATGTATGGGAAGGCATTTTAGCTGATGCCCATTTCATAAATCTCACAGCATTACAACACTTTGCAGTAGGAACACACTCATATGAGTACCTCGATTTTATTCCCAAAGCGAGTGGAGACTCAAACAGAGGACATATGTCACTCATTTTCAATATAACTTATGAGTGGGTTCCCCCTTTCAAGCTGCACACAATTTACATTGACAATTGTCAAGTAGGTCCTAGCTTCGGTGTATGGCTTCAATCTCAAAATCAGTTATCAGAAGTCATCCTTACTAGTACTGGAATCTCTGGCACATTACCAGAGGCATGGCTCTTGAAGATCTCTTCCCAAGTTGAATATTTAGATTTATCTAACAATCAACTCTCTGGAAAGCTTCCGTTCCAATTCATATTTCCAAAATTATATTACATAGATTTGAGTCATAACCAATTCAAGGGCCAATTCCAGCTTTGGTCCACTAATGCGCCCCTATTACTTGAAATGTATCTTTCCGATAATCTTTTGAAAGGTCCTATTCCACCCTCTATTTGTAGCATGCAATATATGAGCATCCTGTCCCTCAGAAACAATCAGTTATCTGGAGAATTCCCTGAGGCATGGAGCTTGTGGAGCAATATACTAGTTGTAGATGTGGCAAACAATAATCTCTCTGGTCATATTCCAAGCTCCATGGGTGTCCCAAGCTCTCTTGGAGTATTGAAGATGAACAACAATAATTTTAGCGGCAAAATTCCTTCTTCCTTGCAAAAATGCTCTGGTTTGGGGGTACTTGATCTTCGAGGCAACAAATTTACTGGAAACCTACCTTTTTGGTTAGGATTAAAAGTATCTCGGTTGCAAATGCTGCAGTTGCGATCCAACTTTTTAAGTGGCCATATTCCTCAACAGTTGTGCAATCTTCCTAATCTTCAGATCCTTGACCTTGGTCACAACAACTTTTCAGGGACTATTCCCAAGTGTTTGAGTAGGTTGACATCTCTGTTGAATGTTGAATCTAGTATTCGTTGGCTACACCACATGAGTTATCCTGAAGAAACAACAGTTATTTCCAAAGGACGAGAACTCGAATATGGAATTCCCAATTTGGATTTGGTAAAGAGTATTGATCTCTCATCGAATCAGTTGAAAGGTGATATTCCTGAAGCAATAACCAAACTCGTTGGATTGGGTATCCTGAACTTGTCGAGGAATCAATTAAATGGAAACATTCCCTCCAAGATAGGAAACTTGCATTGGCTGGAAACTCTTGATCTTTCTCACAATCACCTTTCAGGGAGAATTCCTCAGAGCTTTTCTTCTTTGACCTCACTGTCTCACTTGAACTTGTCTTGTAACAACTTGACAGGAAGAATTCCTTCGGGAAACCAACTCCAAACACTTGAAGATTCATCCATATATGAGGGGAATCCGTCACTGTGCGGGGTTCCTCTTTCTGATTGCCCAGGAGATGACAGACCGATTTCTCCAGAAGATGATAAAGATGAAGATGATTATGGAAGGCTTGGCTTATATGTCAGCATTGTGCTCGGATTCGCTGTTGGCTTTTGGGGTGTTTGTGGTTCTTTAATCATAAAGAAGTCATGGAGGTATGCCTATTTTAAATTCTTTGGCAACATCAAAGATAAGGCAACGCTAGCAATTGCTGTGAGAGTAGCACGTTTGCAAAGGAAAATTTGA

Protein Analysis

1012

Amino Acids

112.71

Weight (kDa)

6.44

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 38 - 75 1.2e-12 Leucine rich repeat N-terminal domain
LRR_8 PF13855 273 - 331 4.3e-10 Leucine rich repeat
LRR_14 PF23598 373 - 539 2.8e-10 Leucine-rich repeat region
LRR_8 PF13855 398 - 454 1.7e-08 Leucine rich repeat
LRR_14 PF23598 823 - 919 1.1e-08 Leucine-rich repeat region
LRR_8 PF13855 862 - 901 1e-05 Leucine rich repeat
LRR_4 PF12799 867 - 902 8e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 342
AasI GACNNNNNNGTC 2 cut(s) 996, 2671
Acc65I GGTACC 1 cut(s) 5
AccB1I GGYRCC 1 cut(s) 5
AccBSI CCGCTC 1 cut(s) 1212
AccII CGCG 1 cut(s) 126
AccIII TCCGGA 1 cut(s) 258
AciI CCGC 4 cut(s) 1212, 1219, 2085, 2781
AclWI GGATC 4 cut(s) 152, 325, 2211, 2269
AcoI YGGCCR 1 cut(s) 2233
AcuI CTGAAG 3 cut(s) 2255, 2412, 2523
AfaI GTAC 9 cut(s) 7, 232, 985, 1108, 1117, 1199, 1448, 1639, 2130
AfiI CCNNNNNNNGG 4 cut(s) 536, 1225, 1586, 1795
AhlI ACTAGT 2 cut(s) 1634, 1981
AjnI CCWGG 2 cut(s) 88, 2803
AjuI GAANNNNNNNTTGG 4 cut(s) 1737, 1769, 2578, 2610
Alw21I GWGCWC 4 cut(s) 16, 88, 1273, 2889
Alw26I GTCTC 5 cut(s) 115, 893, 963, 1470, 2679
AlwI GGATC 4 cut(s) 152, 325, 2211, 2269
Aor13HI TCCGGA 1 cut(s) 258
AoxI GGCC 3 cut(s) 39, 1798, 2233
ApeKI GCWGC 2 cut(s) 1543, 2206
ArsI GACNNNNNNTTYG 2 cut(s) 941, 973
AseI ATTAAT 1 cut(s) 369
Asp700I GAANNNNTTC 3 cut(s) 917, 1083, 2716
Asp718I GGTACC 1 cut(s) 5
AspLEI GCGC 2 cut(s) 128, 1828
AspS9I GGNCC 9 cut(s) 253, 322, 926, 1276, 1302, 1577, 1798, 1815, 1871
AsuHPI GGTGA 3 cut(s) 874, 2504, 2618
AsuNHI GCTAGC 1 cut(s) 2995
AvaII GGWCC 8 cut(s) 253, 322, 926, 1276, 1302, 1577, 1815, 1871
AxyI CCTNAGG 2 cut(s) 905, 1953
BalI TGGCCA 1 cut(s) 2235
BanI GGYRCC 1 cut(s) 5
BanII GRGCYC 2 cut(s) 88, 1232
BarI GAAGNNNNNNTAC 4 cut(s) 160, 192, 2121, 2153
BbsI GAAGAC 2 cut(s) 612, 1131
Bbv12I GWGCWC 4 cut(s) 16, 88, 1273, 2889
BbvI GCAGC 2 cut(s) 1530, 2193
BccI CCATC 3 cut(s) 74, 244, 1061
BcgI CGANNNNNNTGC 2 cut(s) 2869, 2903
BciT130I CCWGG 2 cut(s) 90, 2805
BciVI GTATCC 1 cut(s) 2543
BcoDI GTCTC 5 cut(s) 115, 893, 963, 1470, 2679
BcuI ACTAGT 2 cut(s) 1634, 1981
BfmI CTRYAG 2 cut(s) 1193, 2207
BfuI GTATCC 1 cut(s) 2543
BglII AGATCT 3 cut(s) 409, 1348, 1680
BisI GCNGC 4 cut(s) 1213, 1544, 2086, 2207
BlpI GCTNAGC 1 cut(s) 383
BlsI GCNGC 4 cut(s) 1214, 1545, 2087, 2208
BmcAI AGTACT 2 cut(s) 985, 1639
Bme1390I CCNGG 2 cut(s) 90, 2805
Bme18I GGWCC 8 cut(s) 253, 322, 926, 1276, 1302, 1577, 1815, 1871
BmgT120I GGNCC 9 cut(s) 253, 322, 926, 1276, 1302, 1577, 1798, 1815, 1871
BmiI GGNNCC 4 cut(s) 7, 1303, 1530, 2787
BmrFI CCNGG 2 cut(s) 90, 2805
BmsI GCATC 2 cut(s) 1375, 1920
BmtI GCTAGC 1 cut(s) 2999
BoxI GACNNNNGTC 4 cut(s) 570, 1495, 1566, 2286
BpiI GAAGAC 2 cut(s) 612, 1131
BplI GAGNNNNNCTC 2 cut(s) 2629, 2661
BpmI CTGGAG 4 cut(s) 72, 717, 1962, 2811
Bpu10I CCTNAGC 2 cut(s) 1034, 1208
Bpu1102I GCTNAGC 1 cut(s) 383
BpuEI CTTGAG 1 cut(s) 938
BsaJI CCNNGG 3 cut(s) 2031, 2284, 2803
BsaWI WCCGGW 1 cut(s) 258
BsaXI ACNNNNNCTCC 2 cut(s) 2558, 2588
Bsc4I CCNNNNNNNGG 4 cut(s) 536, 1225, 1586, 1795
Bse118I RCCGGY 1 cut(s) 324
Bse1I ACTGG 9 cut(s) 23, 209, 272, 700, 885, 991, 1278, 1645, 2161
Bse21I CCTNAGG 2 cut(s) 905, 1953
Bse3DI GCAATG 1 cut(s) 1118
BseAI TCCGGA 1 cut(s) 258
BseBI CCWGG 2 cut(s) 90, 2805
BseDI CCNNGG 3 cut(s) 2031, 2284, 2803
BseGI GGATG 4 cut(s) 1072, 1626, 1911, 2750
BseLI CCNNNNNNNGG 4 cut(s) 536, 1225, 1586, 1795
BseMI GCAATG 1 cut(s) 1118
BseMII CTCAG 6 cut(s) 404, 1199, 1294, 1936, 1944, 2660
BseNI ACTGG 9 cut(s) 23, 209, 272, 700, 885, 991, 1278, 1645, 2161
BseRI GAGGAG 1 cut(s) 714
BseXI GCAGC 2 cut(s) 1530, 2193
BsgI GTGCAG 1 cut(s) 1529
Bsh1236I CGCG 1 cut(s) 126
BshFI GGCC 3 cut(s) 41, 1800, 2235
BshNI GGYRCC 1 cut(s) 5
BsiHKAI GWGCWC 4 cut(s) 16, 88, 1273, 2889
BsiSI CCGG 2 cut(s) 259, 325
BslFI GGGAC 4 cut(s) 1111, 1903, 2024, 2320
BslI CCNNNNNNNGG 4 cut(s) 536, 1225, 1586, 1795
BsmAI GTCTC 5 cut(s) 115, 893, 963, 1470, 2679
BsmBI CGTCTC 1 cut(s) 115
BsmFI GGGAC 4 cut(s) 1111, 1903, 2024, 2320
BsmI GAATGC 1 cut(s) 1185
BsnI GGCC 3 cut(s) 41, 1800, 2235
Bsp1286I GDGCHC 5 cut(s) 16, 88, 1232, 1273, 2889
Bsp13I TCCGGA 1 cut(s) 258
Bsp1407I TGTACA 1 cut(s) 1106
Bsp1720I GCTNAGC 1 cut(s) 383
Bsp19I CCATGG 1 cut(s) 2031
BspACI CCGC 4 cut(s) 1212, 1219, 2085, 2781
BspANI GGCC 3 cut(s) 41, 1800, 2235
BspCNI CTCAG 6 cut(s) 405, 1200, 1293, 1935, 1945, 2659
BspEI TCCGGA 1 cut(s) 258
BspFNI CGCG 1 cut(s) 126
BspLI GGNNCC 4 cut(s) 7, 1303, 1530, 2787
BspMAI CTGCAG 2 cut(s) 1197, 2211
BspOI GCTAGC 1 cut(s) 2999
BspPI GGATC 4 cut(s) 152, 325, 2211, 2269
BspT107I GGYRCC 1 cut(s) 5
BsrBI CCGCTC 1 cut(s) 1212
BsrDI GCAATG 1 cut(s) 1118
BsrFI RCCGGY 1 cut(s) 324
BsrGI TGTACA 1 cut(s) 1106
BsrI ACTGG 9 cut(s) 23, 209, 272, 700, 885, 991, 1278, 1645, 2161
BssAI RCCGGY 1 cut(s) 324
BssECI CCNNGG 3 cut(s) 2031, 2284, 2803
BssT1I CCWWGG 2 cut(s) 2031, 2284
Bst2UI CCWGG 2 cut(s) 90, 2805
Bst4CI ACNGT 5 cut(s) 348, 2250, 2404, 2673, 2778
Bst6I CTCTTC 4 cut(s) 49, 111, 658, 1690
BstAPI GCANNNNNTGC 1 cut(s) 2206
BstAUI TGTACA 1 cut(s) 1106
BstC8I GCNNGC 3 cut(s) 1031, 1898, 2997
BstDSI CCRYGG 1 cut(s) 2031
BstF5I GGATG 4 cut(s) 1072, 1626, 1911, 2750
BstFNI CGCG 1 cut(s) 126
BstHHI GCGC 2 cut(s) 128, 1828
BstMAI GTCTC 5 cut(s) 115, 893, 963, 1470, 2679
BstMWI GCNNNNNNNGC 7 cut(s) 83, 1218, 1227, 1971, 2206, 2212, 2996
BstNI CCWGG 2 cut(s) 90, 2805
BstNSI RCATGY 3 cut(s) 719, 730, 1900
BstPAI GACNNNNGTC 4 cut(s) 570, 1495, 1566, 2286
BstSCI CCNGG 2 cut(s) 88, 2803
BstSFI CTRYAG 2 cut(s) 1193, 2207
BstUI CGCG 1 cut(s) 126
BstV1I GCAGC 2 cut(s) 1530, 2193
BstV2I GAAGAC 2 cut(s) 612, 1131
BstX2I RGATCY 4 cut(s) 409, 1348, 1680, 2274
BstXI CCANNNNNNTGG 1 cut(s) 1668
BstYI RGATCY 4 cut(s) 409, 1348, 1680, 2274
Bsu36I CCTNAGG 2 cut(s) 905, 1953
BsuI GTATCC 1 cut(s) 2543
BsuRI GGCC 3 cut(s) 41, 1800, 2235
BtgI CCRYGG 1 cut(s) 2031
BtsCI GGATG 4 cut(s) 1072, 1626, 1911, 2750
BtsIMutI CAGTG 7 cut(s) 16, 153, 202, 693, 1271, 2669, 2774
Cac8I GCNNGC 3 cut(s) 1031, 1898, 2997
CfoI GCGC 2 cut(s) 128, 1828
Cfr10I RCCGGY 1 cut(s) 324
Cfr13I GGNCC 9 cut(s) 253, 322, 926, 1276, 1302, 1577, 1798, 1815, 1871
CpoI CGGWCCG 1 cut(s) 322
CseI GACGC 1 cut(s) 132
Csp6I GTAC 9 cut(s) 6, 231, 984, 1107, 1116, 1198, 1447, 1638, 2129
CspCI CAANNNNNGTGG 4 cut(s) 774, 809, 1453, 1488
CspI CGGWCCG 1 cut(s) 322
CviQI GTAC 9 cut(s) 6, 231, 984, 1107, 1116, 1198, 1447, 1638, 2129
DraI TTTAAA 2 cut(s) 142, 2962
DrdI GACNNNNNNGTC 2 cut(s) 996, 2671
DseDI GACNNNNNNGTC 2 cut(s) 996, 2671
EaeI YGGCCR 1 cut(s) 2233
Eam1104I CTCTTC 4 cut(s) 49, 111, 658, 1690
EarI CTCTTC 4 cut(s) 49, 111, 658, 1690
Ecl136II GAGCTC 1 cut(s) 86
Eco130I CCWWGG 2 cut(s) 2031, 2284
Eco24I GRGCYC 2 cut(s) 88, 1232
Eco47I GGWCC 8 cut(s) 253, 322, 926, 1276, 1302, 1577, 1815, 1871
Eco53kI GAGCTC 1 cut(s) 86
Eco57I CTGAAG 3 cut(s) 2255, 2412, 2523
Eco81I CCTNAGG 2 cut(s) 905, 1953
EcoICRI GAGCTC 1 cut(s) 86
EcoO109I RGGNCCY 2 cut(s) 1577, 1871
EcoRI GAATTC 6 cut(s) 941, 1002, 1946, 2436, 2640, 2712
EcoRII CCWGG 2 cut(s) 88, 2803
EcoT14I CCWWGG 2 cut(s) 2031, 2284
EcoT22I ATGCAT 1 cut(s) 110
EcoT38I GRGCYC 2 cut(s) 88, 1232
ErhI CCWWGG 2 cut(s) 2031, 2284
Esp3I CGTCTC 1 cut(s) 115
FalI AAGNNNNNCTT 4 cut(s) 1614, 1646, 2701, 2733
FaqI GGGAC 4 cut(s) 1111, 1903, 2024, 2320
FauI CCCGC 1 cut(s) 2774
FauNDI CATATG 3 cut(s) 280, 1441, 1494
Fnu4HI GCNGC 4 cut(s) 1213, 1544, 2086, 2207
FokI GGATG 4 cut(s) 1079, 1613, 1898, 2737
FriOI GRGCYC 2 cut(s) 88, 1232
Fsp4HI GCNGC 4 cut(s) 1213, 1544, 2086, 2207
GlaI GCGC 2 cut(s) 127, 1827
GluI GCNGC 4 cut(s) 1213, 1544, 2086, 2207
GsuI CTGGAG 4 cut(s) 72, 717, 1962, 2811
HaeIII GGCC 3 cut(s) 41, 1800, 2235
HapII CCGG 2 cut(s) 259, 325
HgaI GACGC 1 cut(s) 132
HhaI GCGC 2 cut(s) 128, 1828
Hin6I GCGC 2 cut(s) 126, 1826
HinP1I GCGC 2 cut(s) 126, 1826
HincII GTYRAC 4 cut(s) 24, 724, 1342, 2334
HindII GTYRAC 4 cut(s) 24, 724, 1342, 2334
HindIII AAGCTT 2 cut(s) 136, 1733
HpaI GTTAAC 2 cut(s) 24, 724
HpaII CCGG 2 cut(s) 259, 325
HphI GGTGA 3 cut(s) 874, 2504, 2618
Hpy166II GTNNAC 5 cut(s) 24, 724, 1342, 1818, 2334
Hpy8I GTNNAC 5 cut(s) 24, 724, 1342, 1818, 2334
HpyAV CCTTC 6 cut(s) 171, 791, 1364, 2106, 2727, 2853
HpyCH4III ACNGT 5 cut(s) 348, 2250, 2404, 2673, 2778
HpyCH4IV ACGT 1 cut(s) 3019
HpyF10VI GCNNNNNNNGC 7 cut(s) 83, 1218, 1227, 1971, 2206, 2212, 2996
HpySE526I ACGT 1 cut(s) 3019
HspAI GCGC 2 cut(s) 126, 1826
Kpn2I TCCGGA 1 cut(s) 258
KpnI GGTACC 1 cut(s) 9
KspAI GTTAAC 2 cut(s) 24, 724
LmnI GCTCC 5 cut(s) 83, 91, 1962, 1971, 2033
Lsp1109I GCAGC 2 cut(s) 1530, 2193
LweI GCATC 2 cut(s) 1375, 1920
MaeII ACGT 1 cut(s) 3019
MaeIII GTNAC 9 cut(s) 151, 188, 200, 286, 539, 1497, 2288, 2693, 2772
MbiI CCGCTC 1 cut(s) 1212
MfeI CAATTG 2 cut(s) 1564, 3000
MflI RGATCY 4 cut(s) 409, 1348, 1680, 2274
MhlI GDGCHC 5 cut(s) 16, 88, 1232, 1273, 2889
MlsI TGGCCA 1 cut(s) 2235
MluNI TGGCCA 1 cut(s) 2235
MlyI GAGTC 3 cut(s) 984, 1472, 1789
MmeI TCCRAC 2 cut(s) 2244, 2503
Mox20I TGGCCA 1 cut(s) 2235
Mph1103I ATGCAT 1 cut(s) 110
MroI TCCGGA 1 cut(s) 258
MroXI GAANNNNTTC 3 cut(s) 917, 1083, 2716
MscI TGGCCA 1 cut(s) 2235
MslI CAYNNNNRTG 1 cut(s) 1440
Msp20I TGGCCA 1 cut(s) 2235
MspI CCGG 2 cut(s) 259, 325
MspR9I CCNGG 2 cut(s) 90, 2805
MunI CAATTG 2 cut(s) 1564, 3000
Mva1269I GAATGC 1 cut(s) 1185
MvaI CCWGG 2 cut(s) 90, 2805
MvnI CGCG 1 cut(s) 126
MwoI GCNNNNNNNGC 7 cut(s) 83, 1218, 1227, 1971, 2206, 2212, 2996
NcoI CCATGG 1 cut(s) 2031
NdeI CATATG 3 cut(s) 280, 1441, 1494
NheI GCTAGC 1 cut(s) 2995
NlaIV GGNNCC 4 cut(s) 7, 1303, 1530, 2787
NmuCI GTSAC 5 cut(s) 151, 200, 1497, 2288, 2772
NsiI ATGCAT 1 cut(s) 110
NspI RCATGY 3 cut(s) 719, 730, 1900
PaeI GCATGC 1 cut(s) 1900
PctI GAATGC 1 cut(s) 1185
PdmI GAANNNNTTC 3 cut(s) 917, 1083, 2716
PfoI TCCNGGA 1 cut(s) 88
PkrI GCNGC 4 cut(s) 1214, 1545, 2087, 2208
PleI GAGTC 3 cut(s) 984, 1472, 1788
PpsI GAGTC 3 cut(s) 984, 1472, 1788
PpuMI RGGWCCY 2 cut(s) 1577, 1871
PshAI GACNNNNGTC 4 cut(s) 570, 1495, 1566, 2286
PshBI ATTAAT 1 cut(s) 369
PsiI TTATAA 1 cut(s) 342
Psp124BI GAGCTC 1 cut(s) 88
Psp5II RGGWCCY 2 cut(s) 1577, 1871
Psp6I CCWGG 2 cut(s) 88, 2803
PspGI CCWGG 2 cut(s) 88, 2803
PspN4I GGNNCC 4 cut(s) 7, 1303, 1530, 2787
PspPI GGNCC 9 cut(s) 253, 322, 926, 1276, 1302, 1577, 1798, 1815, 1871
PspPPI RGGWCCY 2 cut(s) 1577, 1871
PstI CTGCAG 2 cut(s) 1197, 2211
PsuI RGATCY 4 cut(s) 409, 1348, 1680, 2274
RsaI GTAC 9 cut(s) 7, 232, 985, 1108, 1117, 1199, 1448, 1639, 2130
RsaNI GTAC 9 cut(s) 6, 231, 984, 1107, 1116, 1198, 1447, 1638, 2129
RseI CAYNNNNRTG 1 cut(s) 1440
Rsr2I CGGWCCG 1 cut(s) 322
RsrII CGGWCCG 1 cut(s) 322
SacI GAGCTC 1 cut(s) 88
SatI GCNGC 4 cut(s) 1213, 1544, 2086, 2207
Sau96I GGNCC 9 cut(s) 253, 322, 926, 1276, 1302, 1577, 1798, 1815, 1871
ScaI AGTACT 2 cut(s) 985, 1639
SchI GAGTC 3 cut(s) 984, 1472, 1789
ScrFI CCNGG 2 cut(s) 90, 2805
SduI GDGCHC 5 cut(s) 16, 88, 1232, 1273, 2889
SfaNI GCATC 2 cut(s) 1375, 1920
SfcI CTRYAG 2 cut(s) 1193, 2207
SinI GGWCC 8 cut(s) 253, 322, 926, 1276, 1302, 1577, 1815, 1871
SmiMI CAYNNNNRTG 1 cut(s) 1440
SmlI CTYRAG 1 cut(s) 953
SmoI CTYRAG 1 cut(s) 953
SpeI ACTAGT 2 cut(s) 1634, 1981
SphI GCATGC 1 cut(s) 1900
SsiI CCGC 4 cut(s) 1212, 1219, 2085, 2781
SspI AATATT 1 cut(s) 1700
SstI GAGCTC 1 cut(s) 88
StyD4I CCNGG 2 cut(s) 88, 2803
StyI CCWWGG 2 cut(s) 2031, 2284
TaaI ACNGT 5 cut(s) 348, 2250, 2404, 2673, 2778
TaiI ACGT 1 cut(s) 3022
TaqI TCGA 7 cut(s) 980, 1000, 1452, 2140, 2427, 2477, 2546
TaqII GACCGA 1 cut(s) 2833
TatI WGTACW 4 cut(s) 983, 1106, 1115, 1637
TauI GCSGC 2 cut(s) 1215, 2088
TscAI CASTG 7 cut(s) 23, 160, 209, 700, 1278, 2676, 2781
TseFI GTSAC 5 cut(s) 151, 200, 1497, 2288, 2772
TseI GCWGC 2 cut(s) 1543, 2206
Tsp45I GTSAC 5 cut(s) 151, 200, 1497, 2288, 2772
TspGWI ACGGA 3 cut(s) 693, 1728, 2760
TspRI CASTG 7 cut(s) 23, 160, 209, 700, 1278, 2676, 2781
VpaK11BI GGWCC 8 cut(s) 253, 322, 926, 1276, 1302, 1577, 1815, 1871
VspI ATTAAT 1 cut(s) 369
XceI RCATGY 3 cut(s) 719, 730, 1900
XcmI CCANNNNNNNNNTGG 1 cut(s) 2449
XmnI GAANNNNTTC 3 cut(s) 917, 1083, 2716
ZrmI AGTACT 2 cut(s) 985, 1639
Zsp2I ATGCAT 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.