Rmu_sc0011646.1_g000003

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011646.1
Physical Location & Seq
Reverse (-)
19937 .. 22918
2982 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011646.1_g000003.1.cds

Sequence Viewer

Length: 2982 bp
atggatagcttctgtgcaaacctattcaagcgtaccagctatcgcttcctcgtcaaaaatgttgctcactacttgctctttgttattctggcatcttcatatctgtacactactcaactgtgtttgggagatggacttccgagtggtgtgagatcatcatcatgcatcgaggaagagagacgagcgcttctcagcttcaaaggagattttactgatccttccggtaggctttcttcttgggtgggtcaggattgctgccgatggaaagggatttcgtgcaacaaccgtactggtcatgttgcaaggatggacctccgaaacctgaatcatgatcacggcttctacggggagacttctttggggggtaagattaatccttctttgcttatcttgaagaacttacgttaccttgatctaagcggaaacgatttttatggacgtcaaattcctaacttctttgggaagcttcaaagtttgaggtatctcaatctctcatacaattcatttgtgggagagattcccccatctcttggtaacctctcaaacttgaactatcttgacctcaattctcatattttaaatgtcgttcattctaaaaacttgaattggctttctcatctctcttccctaaagtatctcaatcttggaggtgtgaaccttagcagcacaggagtgagttggctacatgatgtcaacatgcttcgttcactcttagagttgcatttgtcttattgccaaattcaaaaccttccacactcccagctgccgtcagtgaacttcacatcccgcctattggttcttgatatatcacataatgatattaattcttcatttcccaactggttttttaatcttaccaacctcaaaagacttgatgcatcttccaatttgttcgggctcttccctgttgaatttgcaaacctcaagtctttggaagaccttgatttgagtggaaattatctcgaaggtcaaattcccaaagtcattggtactttgtgcagcctaaggatattagatctttcggggaactcattcaatggtagtttggaaaatgttttgaatggtttctcaaattgcacaagttatagattaggactgctacaaaatctgaaggagcttgacctcggtgggaacctagtttctggttcaattccacaatctattagtaatttatcatcattggaaaaactggacatttcgtataataatttcaatgggtccattcctgaaagtttgggacaactctctcagctagttcacctcgatctatctgataattcgttggaaggcaatctaaatgaagcccatttccgaactctcacaaagttggagtcttttgcagtcggtagcaaacacgagcccgtgactgggtccctcatttttaacatggctcatgactgggttcctcctttccaacttaattcaatcgacattgccgactgcagagtaggtcctgcctttggggtatggcttcagtctcaaactgaattaacggaagtcacgcttcgtaatactggaatctcagatttcataccagaggaatggttcttgaagatatctttccaactcacatggctggatttatctaacaaccaaattcgtggaaagcttccatttcacatgacctccccgtccttggagaatatagatttgagtcataatcaatttgagggccctcttccacattggtctagcgatgctgccaaatacctcgatcttcaaagaaatttattttccgggccgattccctcaaattttgatcaactgttgcctaaattgcaggaattgtatctatctgacaatcatctagatggtagtataccaccctctgtgtgtaacctgtcagatttgtcatttcttatgttaagaagcaatcgcttgactggagaatttcctcaagcatggagaatgtggccacgtatatttgttgtagatgtctcagacaacaatttgtctggcaatttctccagttcaatgggtattccaagctcactaatggtattggatctgagcaaaaacaatttcgggggtcaaattccttcttctctattccaaaactgcagccagttgctgagtattgatcttggaggcaatagatttactggaagcatacctttacggacaagatcaaatgtatcatccgaattgcgtatgctaagattacgatccaactctttaagcggacatatccccaatcgattgtgctctcttcaatatcttcatatcatagaccttggccacaacaacttttcagggaccattcccaagtgtttgtataatctgactgctttggcctaccgtaattacagtaggtacggttttgaaaattatcttgagacggccagcttgacattgaagggacaagaactcgcatataacaccactctggatttggtgaaaagcattgatttctcatcaaacaacttagaaggtgaaatccctgacgaagtaagcagcctcattggattgggcacgttgaacttgtcaagaaatcaactgactggaaacattccctcaaagattggaaacatgcaattgctggaaactcttgatctctcacacaatcacctttccgggcatattcctcagagtttatcttcattaacctttttggctcacctgaacttgtctttcaacaacttgtccggaagaattccttcgggcaaccaacttcaaacacttgatgattcatccatttacgaaggcaatccatccttgtgtggggtccctctttcaactgtctgcccgggagatggccctgacgatggtgatcataatgatgatcataatgatgagaatgggaagtttggtatcgttgttagcgctgtcctcggcttcatcataggcttctggagtgtgtgtggcacattggttatgaagaaatcatggaggtatgcctattttcgattctttgataacataaaggagagggcagcattagcaattgcattgagagtggctcgttggcaaaggaggacttga

Protein Analysis

993

Amino Acids

110.66

Weight (kDa)

6.06

Isoelectric Point (pI)

36.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1630
AatII GACGTC 1 cut(s) 442
AccB7I CCANNNNNTGG 1 cut(s) 530
AccI GTMKAC 1 cut(s) 1819
AccIII TCCGGA 1 cut(s) 2645
AciI CCGC 3 cut(s) 420, 787, 2181
AclWI GGATC 3 cut(s) 209, 2013, 2160
AcoI YGGCCR 3 cut(s) 1913, 2236, 2340
AcuI CTGAAG 2 cut(s) 1130, 1457
AcyI GRCGYC 1 cut(s) 439
AfaI GTAC 5 cut(s) 34, 107, 289, 991, 2315
AfeI AGCGCT 2 cut(s) 186, 2824
AfiI CCNNNNNNNGG 9 cut(s) 530, 793, 1367, 1368, 1460, 1636, 2721, 2753, 2765
AleI CACNNNNGTG 1 cut(s) 671
AloI GAACNNNNNNTCC 2 cut(s) 767, 799
Alw21I GWGCWC 1 cut(s) 2207
Alw26I GTCTC 5 cut(s) 172, 344, 1482, 1942, 2330
AlwI GGATC 3 cut(s) 209, 2013, 2160
AlwNI CAGNNNCTG 1 cut(s) 2071
Ama87I CYCGRG 1 cut(s) 2746
Aor13HI TCCGGA 1 cut(s) 2645
Aor51HI AGCGCT 2 cut(s) 186, 2824
AoxI GGCC 7 cut(s) 1672, 1739, 1913, 2236, 2292, 2340, 2755
ApaI GGGCCC 1 cut(s) 1676
ApeKI GCWGC 8 cut(s) 255, 663, 763, 999, 1700, 2061, 2454, 2933
ArsI GACNNNNNNTTYG 4 cut(s) 911, 943, 1316, 1348
AseI ATTAAT 2 cut(s) 372, 822
Asp700I GAANNNNTTC 3 cut(s) 1031, 1064, 2656
AspLEI GCGC 2 cut(s) 187, 2825
AsuC2I CCSGG 4 cut(s) 1738, 2575, 2747, 2748
AsuHPI GGTGA 6 cut(s) 1250, 2407, 2444, 2558, 2609, 2780
AvaI CYCGRG 1 cut(s) 2746
AvaII GGWCC 6 cut(s) 310, 1218, 1371, 1451, 2256, 2725
AxyI CCTNAGG 1 cut(s) 1004
BaeGI GKGCMC 2 cut(s) 1676, 2474
BalI TGGCCA 2 cut(s) 1915, 2238
BanII GRGCYC 3 cut(s) 900, 1362, 1676
BarI GAAGNNNNNNTAC 2 cut(s) 217, 249
BauI CACGAG 1 cut(s) 1355
BbsI GAAGAC 1 cut(s) 942
Bbv12I GWGCWC 1 cut(s) 2207
BbvI GCAGC 8 cut(s) 242, 675, 750, 1011, 1687, 2073, 2466, 2945
BccI CCATC 8 cut(s) 125, 255, 301, 532, 1805, 2719, 2747, 2759
BceAI ACGGC 3 cut(s) 352, 751, 2355
BclI TGATCA 4 cut(s) 331, 1759, 2770, 2782
BcnI CCSGG 4 cut(s) 1738, 2575, 2747, 2748
BcoDI GTCTC 5 cut(s) 172, 344, 1482, 1942, 2330
BfaI CTAG 4 cut(s) 1136, 1253, 1692, 1808
BfmI CTRYAG 2 cut(s) 1441, 2059
BfoI RGCGCY 2 cut(s) 188, 2826
BglII AGATCT 1 cut(s) 1015
BisI GCNGC 8 cut(s) 256, 664, 764, 1000, 1701, 2062, 2455, 2934
BlsI GCNGC 8 cut(s) 257, 665, 765, 1001, 1702, 2063, 2456, 2935
Bme1390I CCNGG 4 cut(s) 1738, 2575, 2747, 2748
Bme18I GGWCC 6 cut(s) 310, 1218, 1371, 1451, 2256, 2725
BmeT110I CYCGRG 1 cut(s) 2746
BmiI GGNNCC 9 cut(s) 1133, 1219, 1372, 1373, 1404, 1674, 2257, 2726, 2727
BmrFI CCNGG 4 cut(s) 1738, 2575, 2747, 2748
BmrI ACTGGG 2 cut(s) 1377, 1408
BmsI GCATC 5 cut(s) 101, 174, 865, 887, 1687
BmuI ACTGGG 2 cut(s) 1377, 1408
BpiI GAAGAC 1 cut(s) 942
BplI GAGNNNNNCTC 4 cut(s) 174, 206, 2944, 2976
BpmI CTGGAG 3 cut(s) 1905, 1951, 2872
Bpu10I CCTNAGC 1 cut(s) 659
BpuEI CTTGAG 3 cut(s) 908, 1881, 2354
BpuMI CCSGG 4 cut(s) 1738, 2575, 2747, 2748
Bsa29I ATCGAT 1 cut(s) 2197
BsaAI YACGTR 1 cut(s) 1919
BsaBI GATNNNNATC 3 cut(s) 157, 2164, 2769
BsaHI GRCGYC 1 cut(s) 439
BsaJI CCNNGG 5 cut(s) 1123, 1635, 2233, 2746, 2830
BsaWI WCCGGW 2 cut(s) 221, 2645
BsaXI ACNNNNNCTCC 4 cut(s) 1610, 1640, 2845, 2875
Bsc4I CCNNNNNNNGG 9 cut(s) 530, 793, 1367, 1368, 1460, 1636, 2721, 2753, 2765
Bse21I CCTNAGG 1 cut(s) 1004
Bse3DI GCAATG 1 cut(s) 1431
Bse8I GATNNNNATC 3 cut(s) 157, 2164, 2769
BseAI TCCGGA 1 cut(s) 2645
BseCI ATCGAT 1 cut(s) 2197
BseDI CCNNGG 5 cut(s) 1123, 1635, 2233, 2746, 2830
BseGI GGATG 5 cut(s) 312, 782, 2138, 2690, 2711
BseJI GATNNNNATC 3 cut(s) 157, 2164, 2769
BseLI CCNNNNNNNGG 9 cut(s) 530, 793, 1367, 1368, 1460, 1636, 2721, 2753, 2765
BseMI GCAATG 1 cut(s) 1431
BseMII CTCAG 7 cut(s) 205, 1262, 1536, 1953, 2000, 2063, 2600
BseSI GKGCMC 2 cut(s) 1676, 2474
BseXI GCAGC 8 cut(s) 242, 675, 750, 1011, 1687, 2073, 2466, 2945
BseYI CCCAGC 1 cut(s) 759
BsgI GTGCAG 1 cut(s) 1018
BshFI GGCC 7 cut(s) 1674, 1741, 1915, 2238, 2294, 2342, 2757
BshVI ATCGAT 1 cut(s) 2197
BsiHKAI GWGCWC 1 cut(s) 2207
BsiHKCI CYCGRG 1 cut(s) 2746
BsiSI CCGG 5 cut(s) 222, 1737, 2574, 2646, 2747
BslFI GGGAC 5 cut(s) 1251, 1357, 2269, 2373, 2711
BslI CCNNNNNNNGG 9 cut(s) 530, 793, 1367, 1368, 1460, 1636, 2721, 2753, 2765
BsmAI GTCTC 5 cut(s) 172, 344, 1482, 1942, 2330
BsmBI CGTCTC 2 cut(s) 172, 2330
BsmFI GGGAC 5 cut(s) 1251, 1357, 2269, 2373, 2711
BsnI GGCC 7 cut(s) 1674, 1741, 1915, 2238, 2294, 2342, 2757
BsoBI CYCGRG 1 cut(s) 2746
Bsp120I GGGCCC 1 cut(s) 1672
Bsp1286I GDGCHC 5 cut(s) 900, 1362, 1676, 2207, 2474
Bsp13I TCCGGA 1 cut(s) 2645
Bsp1407I TGTACA 1 cut(s) 105
BspACI CCGC 3 cut(s) 420, 787, 2181
BspANI GGCC 7 cut(s) 1674, 1741, 1915, 2238, 2294, 2342, 2757
BspCNI CTCAG 7 cut(s) 204, 1261, 1535, 1952, 2001, 2064, 2599
BspDI ATCGAT 1 cut(s) 2197
BspEI TCCGGA 1 cut(s) 2645
BspHI TCATGA 2 cut(s) 328, 1393
BspLI GGNNCC 9 cut(s) 1133, 1219, 1372, 1373, 1404, 1674, 2257, 2726, 2727
BspMAI CTGCAG 2 cut(s) 1445, 2063
BspPI GGATC 3 cut(s) 209, 2013, 2160
BspQI GCTCTTC 1 cut(s) 905
BsrDI GCAATG 1 cut(s) 1431
BsrGI TGTACA 1 cut(s) 105
BssECI CCNNGG 5 cut(s) 1123, 1635, 2233, 2746, 2830
BssNAI GTATAC 1 cut(s) 1820
BssNI GRCGYC 1 cut(s) 439
BssSI CACGAG 1 cut(s) 1355
BssT1I CCWWGG 2 cut(s) 1635, 2233
Bst1107I GTATAC 1 cut(s) 1820
Bst2BI CACGAG 1 cut(s) 1355
Bst4CI ACNGT 7 cut(s) 120, 287, 1767, 2300, 2309, 2318, 2740
Bst6I CTCTTC 5 cut(s) 168, 628, 905, 1683, 2214
BstACI GRCGYC 1 cut(s) 439
BstAUI TGTACA 1 cut(s) 105
BstBAI YACGTR 1 cut(s) 1919
BstC8I GCNNGC 1 cut(s) 2344
BstEII GGTNACC 1 cut(s) 533
BstF5I GGATG 5 cut(s) 312, 782, 2138, 2690, 2711
BstH2I RGCGCY 2 cut(s) 188, 2826
BstHHI GCGC 2 cut(s) 187, 2825
BstMAI GTCTC 5 cut(s) 172, 344, 1482, 1942, 2330
BstMWI GCNNNNNNNGC 2 cut(s) 1777, 2939
BstNSI RCATGY 2 cut(s) 700, 2533
BstPI GGTNACC 1 cut(s) 533
BstSCI CCNGG 4 cut(s) 1736, 2573, 2745, 2746
BstSFI CTRYAG 2 cut(s) 1441, 2059
BstSLI GKGCMC 2 cut(s) 1676, 2474
BstV1I GCAGC 8 cut(s) 242, 675, 750, 1011, 1687, 2073, 2466, 2945
BstV2I GAAGAC 1 cut(s) 942
BstX2I RGATCY 2 cut(s) 1015, 2005
BstXI CCANNNNNNTGG 3 cut(s) 1542, 1601, 1975
BstYI RGATCY 2 cut(s) 1015, 2005
BstZ17I GTATAC 1 cut(s) 1820
Bsu15I ATCGAT 1 cut(s) 2197
Bsu36I CCTNAGG 1 cut(s) 1004
BsuRI GGCC 7 cut(s) 1674, 1741, 1915, 2238, 2294, 2342, 2757
BsuTUI ATCGAT 1 cut(s) 2197
BtgZI GCGATG 1 cut(s) 1710
BtsCI GGATG 5 cut(s) 312, 782, 2138, 2690, 2711
BtsIMutI CAGTG 1 cut(s) 777
Cac8I GCNNGC 1 cut(s) 2344
CaiI CAGNNNCTG 1 cut(s) 2071
CciI TCATGA 2 cut(s) 328, 1393
CfoI GCGC 2 cut(s) 187, 2825
Cfr9I CCCGGG 1 cut(s) 2746
ClaI ATCGAT 1 cut(s) 2197
Csp6I GTAC 5 cut(s) 33, 106, 288, 990, 2314
CviQI GTAC 5 cut(s) 33, 106, 288, 990, 2314
DraI TTTAAA 1 cut(s) 579
DrdI GACNNNNNNGTC 1 cut(s) 1630
DseDI GACNNNNNNGTC 1 cut(s) 1630
EaeI YGGCCR 3 cut(s) 1913, 2236, 2340
Eam1104I CTCTTC 5 cut(s) 168, 628, 905, 1683, 2214
EarI CTCTTC 5 cut(s) 168, 628, 905, 1683, 2214
Eco130I CCWWGG 2 cut(s) 1635, 2233
Eco24I GRGCYC 3 cut(s) 900, 1362, 1676
Eco32I GATATC 1 cut(s) 1557
Eco47I GGWCC 6 cut(s) 310, 1218, 1371, 1451, 2256, 2725
Eco47III AGCGCT 2 cut(s) 186, 2824
Eco57I CTGAAG 2 cut(s) 1130, 1457
Eco81I CCTNAGG 1 cut(s) 1004
Eco88I CYCGRG 1 cut(s) 2746
Eco91I GGTNACC 1 cut(s) 533
EcoO109I RGGNCCY 5 cut(s) 1371, 1451, 1672, 1673, 2725
EcoO65I GGTNACC 1 cut(s) 533
EcoRI GAATTC 1 cut(s) 2652
EcoRV GATATC 1 cut(s) 1557
EcoT14I CCWWGG 2 cut(s) 1635, 2233
EcoT22I ATGCAT 2 cut(s) 167, 880
EcoT38I GRGCYC 3 cut(s) 900, 1362, 1676
ErhI CCWWGG 2 cut(s) 1635, 2233
Esp3I CGTCTC 2 cut(s) 172, 2330
FalI AAGNNNNNCTT 7 cut(s) 1488, 1520, 2098, 2130, 2641, 2673, 2962
FaqI GGGAC 5 cut(s) 1251, 1357, 2269, 2373, 2711
FauI CCCGC 1 cut(s) 794
FbaI TGATCA 4 cut(s) 331, 1759, 2770, 2782
FblI GTMKAC 1 cut(s) 1819
Fnu4HI GCNGC 8 cut(s) 256, 664, 764, 1000, 1701, 2062, 2455, 2934
FokI GGATG 5 cut(s) 319, 769, 2125, 2677, 2698
FriOI GRGCYC 3 cut(s) 900, 1362, 1676
Fsp4HI GCNGC 8 cut(s) 256, 664, 764, 1000, 1701, 2062, 2455, 2934
FspBI CTAG 4 cut(s) 1136, 1253, 1692, 1808
GlaI GCGC 2 cut(s) 186, 2824
GluI GCNGC 8 cut(s) 256, 664, 764, 1000, 1701, 2062, 2455, 2934
GsaI CCCAGC 1 cut(s) 763
GsuI CTGGAG 3 cut(s) 1905, 1951, 2872
HaeII RGCGCY 2 cut(s) 188, 2826
HaeIII GGCC 7 cut(s) 1674, 1741, 1915, 2238, 2294, 2342, 2757
HapII CCGG 5 cut(s) 222, 1737, 2574, 2646, 2747
HhaI GCGC 2 cut(s) 187, 2825
Hin1I GRCGYC 1 cut(s) 439
Hin6I GCGC 2 cut(s) 185, 2823
HinP1I GCGC 2 cut(s) 185, 2823
HincII GTYRAC 1 cut(s) 694
HindII GTYRAC 1 cut(s) 694
HindIII AAGCTT 2 cut(s) 464, 1607
HinfI GANTC 8 cut(s) 325, 517, 1331, 1518, 1654, 1744, 2687, 2907
HpaII CCGG 5 cut(s) 222, 1737, 2574, 2646, 2747
HphI GGTGA 6 cut(s) 1250, 2407, 2444, 2558, 2609, 2780
Hpy166II GTNNAC 7 cut(s) 108, 655, 694, 707, 775, 1258, 1820
Hpy8I GTNNAC 7 cut(s) 108, 655, 694, 707, 775, 1258, 1820
HpyCH4III ACNGT 7 cut(s) 120, 287, 1767, 2300, 2309, 2318, 2740
HpyCH4IV ACGT 4 cut(s) 403, 439, 1918, 2474
HpyF10VI GCNNNNNNNGC 2 cut(s) 1777, 2939
HpySE526I ACGT 4 cut(s) 403, 439, 1918, 2474
Hsp92I GRCGYC 1 cut(s) 439
HspAI GCGC 2 cut(s) 185, 2823
KflI GGGWCCC 2 cut(s) 1371, 2725
Kpn2I TCCGGA 1 cut(s) 2645
Ksp22I TGATCA 4 cut(s) 331, 1759, 2770, 2782
LguI GCTCTTC 1 cut(s) 905
LmnI GCTCC 1 cut(s) 1114
Lsp1109I GCAGC 8 cut(s) 242, 675, 750, 1011, 1687, 2073, 2466, 2945
LweI GCATC 5 cut(s) 101, 174, 865, 887, 1687
MaeI CTAG 4 cut(s) 1136, 1253, 1692, 1808
MaeII ACGT 4 cut(s) 403, 439, 1918, 2474
MaeIII GTNAC 5 cut(s) 404, 533, 1363, 1498, 1835
MfeI CAATTG 2 cut(s) 2534, 2943
MflI RGATCY 2 cut(s) 1015, 2005
MhlI GDGCHC 5 cut(s) 900, 1362, 1676, 2207, 2474
MlsI TGGCCA 2 cut(s) 1915, 2238
MluNI TGGCCA 2 cut(s) 1915, 2238
MlyI GAGTC 2 cut(s) 1340, 1663
MmeI TCCRAC 5 cut(s) 1263, 1308, 1438, 1588, 2193
Mox20I TGGCCA 2 cut(s) 1915, 2238
Mph1103I ATGCAT 2 cut(s) 167, 880
MroI TCCGGA 1 cut(s) 2645
MroXI GAANNNNTTC 3 cut(s) 1031, 1064, 2656
MscI TGGCCA 2 cut(s) 1915, 2238
MslI CAYNNNNRTG 6 cut(s) 160, 671, 1809, 2716, 2778, 2790
Msp20I TGGCCA 2 cut(s) 1915, 2238
MspA1I CMGCKG 1 cut(s) 763
MspI CCGG 5 cut(s) 222, 1737, 2574, 2646, 2747
MspR9I CCNGG 4 cut(s) 1738, 2575, 2747, 2748
MunI CAATTG 2 cut(s) 2534, 2943
MwoI GCNNNNNNNGC 2 cut(s) 1777, 2939
NciI CCSGG 4 cut(s) 1738, 2575, 2747, 2748
NlaIV GGNNCC 9 cut(s) 1133, 1219, 1372, 1373, 1404, 1674, 2257, 2726, 2727
NmeAIII GCCGAG 1 cut(s) 2811
NmuCI GTSAC 2 cut(s) 1363, 1498
NsiI ATGCAT 2 cut(s) 167, 880
NspI RCATGY 2 cut(s) 700, 2533
OliI CACNNNNGTG 1 cut(s) 671
PagI TCATGA 2 cut(s) 328, 1393
PciSI GCTCTTC 1 cut(s) 905
PcsI WCGNNNNNNNCGW 1 cut(s) 1434
PdmI GAANNNNTTC 3 cut(s) 1031, 1064, 2656
PfeI GAWTC 6 cut(s) 325, 517, 1518, 1744, 2687, 2907
PflFI GACNNNGTC 1 cut(s) 1369
PflMI CCANNNNNTGG 1 cut(s) 530
PkrI GCNGC 8 cut(s) 257, 665, 765, 1001, 1702, 2063, 2456, 2935
PleI GAGTC 2 cut(s) 1339, 1662
PpsI GAGTC 2 cut(s) 1339, 1662
Ppu21I YACGTR 1 cut(s) 1919
PpuMI RGGWCCY 3 cut(s) 1371, 1451, 2725
PshBI ATTAAT 2 cut(s) 372, 822
Psp5II RGGWCCY 3 cut(s) 1371, 1451, 2725
PspEI GGTNACC 1 cut(s) 533
PspFI CCCAGC 1 cut(s) 759
PspN4I GGNNCC 9 cut(s) 1133, 1219, 1372, 1373, 1404, 1674, 2257, 2726, 2727
PspOMI GGGCCC 1 cut(s) 1672
PspPPI RGGWCCY 3 cut(s) 1371, 1451, 2725
PsrI GAACNNNNNNTAC 2 cut(s) 389, 421
PstI CTGCAG 2 cut(s) 1445, 2063
PstNI CAGNNNCTG 1 cut(s) 2071
PsuI RGATCY 2 cut(s) 1015, 2005
PsyI GACNNNGTC 1 cut(s) 1369
PvuII CAGCTG 1 cut(s) 763
RsaI GTAC 5 cut(s) 34, 107, 289, 991, 2315
RsaNI GTAC 5 cut(s) 33, 106, 288, 990, 2314
RseI CAYNNNNRTG 6 cut(s) 160, 671, 1809, 2716, 2778, 2790
SapI GCTCTTC 1 cut(s) 905
SatI GCNGC 8 cut(s) 256, 664, 764, 1000, 1701, 2062, 2455, 2934
SchI GAGTC 2 cut(s) 1340, 1663
ScrFI CCNGG 4 cut(s) 1738, 2575, 2747, 2748
SduI GDGCHC 5 cut(s) 900, 1362, 1676, 2207, 2474
SfaNI GCATC 5 cut(s) 101, 174, 865, 887, 1687
SfcI CTRYAG 2 cut(s) 1441, 2059
SinI GGWCC 6 cut(s) 310, 1218, 1371, 1451, 2256, 2725
SmaI CCCGGG 1 cut(s) 2748
SmiMI CAYNNNNRTG 6 cut(s) 160, 671, 1809, 2716, 2778, 2790
SmlI CTYRAG 3 cut(s) 923, 1896, 2333
SmoI CTYRAG 3 cut(s) 923, 1896, 2333
SsiI CCGC 3 cut(s) 420, 787, 2181
SspMI CTAG 4 cut(s) 1136, 1253, 1692, 1808
StyD4I CCNGG 4 cut(s) 1736, 2573, 2745, 2746
StyI CCWWGG 2 cut(s) 1635, 2233
TaaI ACNGT 7 cut(s) 120, 287, 1767, 2300, 2309, 2318, 2740
TaiI ACGT 4 cut(s) 406, 442, 1921, 2477
TaqI TCGA 7 cut(s) 168, 963, 1263, 1428, 1713, 2197, 2905
TatI WGTACW 1 cut(s) 105
TfiI GAWTC 6 cut(s) 325, 517, 1518, 1744, 2687, 2907
TscAI CASTG 1 cut(s) 777
TseFI GTSAC 2 cut(s) 1363, 1498
TseI GCWGC 8 cut(s) 255, 663, 763, 999, 1700, 2061, 2454, 2933
Tsp45I GTSAC 2 cut(s) 1363, 1498
TspGWI ACGGA 2 cut(s) 1508, 2134
TspMI CCCGGG 1 cut(s) 2746
TspRI CASTG 1 cut(s) 777
Tth111I GACNNNGTC 1 cut(s) 1369
Van91I CCANNNNNTGG 1 cut(s) 530
VpaK11BI GGWCC 6 cut(s) 310, 1218, 1371, 1451, 2256, 2725
VspI ATTAAT 2 cut(s) 372, 822
XbaI TCTAGA 1 cut(s) 1807
XceI RCATGY 2 cut(s) 700, 2533
XcmI CCANNNNNNNNNTGG 1 cut(s) 2389
XmaI CCCGGG 1 cut(s) 2746
XmiI GTMKAC 1 cut(s) 1819
XmnI GAANNNNTTC 3 cut(s) 1031, 1064, 2656
XspI CTAG 4 cut(s) 1136, 1253, 1692, 1808
ZraI GACGTC 1 cut(s) 440
Zsp2I ATGCAT 2 cut(s) 167, 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.