Rw5G042390

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
74263471 .. 74272083
8613 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G042390.1

Sequence Viewer

Length: 3207 bp
ATGTTATGTTATATGTTATGTTTCATTCTAATATATTGTACAAAGTTGCTTCTGCAGTTTTCCTCAAATAACAAAGCTCTTTCTCGTTTATTATTCTATTACTATCCTAGCAAATATAATTATTACTTCTTGAAGATTGATGACCCGAAATATAAATGTGACTATGTGAGCTGGGGTTATTTAAGGAACTTTAGTGAGGCATGCGTTTTTGTTTCTTGCATTTCAAGCTTGGGTAGAGGATGGGCCTTCTTGTTCATAAAACATATAAGGAGAGCTTTATCAAAATATCATATCTTTGCAGCTAGCAAATTAATAACATCTACCTCACTTGAACTCTGCTTGGGAGATGGCCTTCCAGTTGTGAAATGCATCGACACAGAGAGAAGCGCGCTTCTCATCTTTAAGGCAGATCTTATCGATGCTTCGGGTAGGCTATCATCTTGGGAGGGTCAAAATTGTTGTCAATGGAAAGGGATTTCATGCAACAACCGCACTGGTCATGTTGAAAGGATGGACCTCCGCAATACAAGTCCAGCTCCATCTATTGATGCTGAAGACCAGGAGTTTGAGGCTTATGAAGAGTCCTTTTTGGGGGGTAAGATAAATCCTTCTTTGCTTAGCTTGAAATATATGAGTTACTTAGACTTGAGCTCGAATGGCTTTCAAGGGCTTCAAATTCCTAAGTTCTTTGGTCAGCTTAAAAGTCTGAAGTATCTCAATGTCTCATCTTCATCTTTTGAGGGACAGATTCCACCACATCTTGGTAACCTATCAAATTTGAACTATCTTGACCTCAGTGGTAACTATTTATTGGAAATTTCTTCCATAAATTTGCATTGGCTTTCTCATCTCTTCTCTCTAAAATACCTCAGTCTGACTGAAGTGGACCTTAGCAATGCAGGAGCCAGTTGGCTACATGTTGTTAACATGCTTCCTTCCATGCTAGAGTTACACTTGTCTAGATGCAACATTGAAAGCCTTCCACCTTCACTTCACACCATGAACCTCACATCACTTTTGATCCTTGATATGTCATACAATGATTTTAAGTTCCCATTTCCAAAGTGGGTCTTTAATCTAACTAGCCTCAGAGAACTTCACTTGGCCAAGAATTCTTTCAGCGGTCCCTTTCCCAATGATTTCGTTAACCTGAAATCATTGGAAGAACTTGATTTATCTCTTAATGGTCTTCACGGTCGAATTCCCAAATTCTTTGGAAATCTCTGCAACCTTAAGACCTTAATTCTTGCGGGAAACGCATTTGATCAGGGTATTCCAGAGTTTTTGGATGGTTTATCAGGTTGTGCAAATAATAAGTTGGAGTCACTAGACTTGTCTAGTAATATGCTGGTAGGCGAATTGCCTGCCTCCTTAGGGATGCTCCCCCATTTGCAGTACCTTAACCTCTTCGACAATCATTTGAATGGATCCATCCCGGAAAGTTTGGGACGACTCTCTGAGCTAGTTTATCTAGACCTGTCGGGCAACTCATTGGTAGGCTTTTTAACTGAAGCCCATTTCATAGATCTCGCCAAGTTAAAATACATTGCACTGGGCAATATCAGTAAATTCAGTGCCCCCAACCTGCATCCTTCCATCATTTTCAATGTGGCTTATGAGTGGGTTCCTCCTTTCAAGCTTGACACCATTTACATCAGGAACTGTCAAGTAGGTCCTGCCTTTTCACTATGGCTTCTATCTCAAACTGAACTAGTATATGTCTCTCTAAGGAATACAGGCATCTCGGATTCCATACCAGAGGAATGGTTCGTGAAAATATCTTCCCAAGTCCAATATTTGGATTTATCTTACAACCAAATTCGTGGAAAGCTTCCAGTCCAACTGAAAGTTCCAAATTTAGTGACTCTAGATTTGAGACATAATCAATTCCACGGCTCACTCCCGCTTTGGTTGTGTAAGGAGGCTTACTACCTAAATCTTGCTAGTAATTCATTTTGTGGGCCAATTCCGTTAACTTTTGACCAACATTTTCCAAATTTGCAACAACTGCATCTCTTTGAAAATTATTTGAATGGCACGATTCCATCCTCTGTTTTCAATATGCAGAAGTTGTTAGTCTTTTCTCTAAGAAGCAACAACATTTCTGGAGAGTTCCCTCAAGCATGGAGTGTGTGGAGTGACATATACATTGTAGATGTTGGAGACAATCATCTCTCAGGAAATATTCCCAGTTCAATGGGTATCCCACGTTCACTTTTTATGTTGTCGATGAAGAACAACAAATTCGATGGTGAAATCCCGATGGCCTTGGGAAATTGCACCAAACTGAGGAGTATTGATCTTGGTGGTAATAGATTTACTGGAAACCTACCTTCATGGATAGGAACAAATGTATCCAAGGTGTTTATCTTACGGCTGCCATCCAATTATCTAAGTGGACATATTCCCCAGCAATTGTGCAATCTTGGCTACCTTCACCTCTTAGATCTTGGTCATAACCACCTCTCAGGTACTATACCAAAGTGTTTGAATAATATGACTGCTCTAACAGATGTCAAGTTCAATGCTTATCCCTTATATCAGGCGTATGAACAACAAATAATGGTGACCAAAGGAAGAGAATTCCAATATAACAAGACTCTGAGGTGGGTAAAAAGCATAGATCTTTCCTCAAATAGTTTGGAAGGTGAAATCCCTGAAAAAATATGCAGTCTCTTGGCATTGGTTATCTTGAACTTGTCGATGAATCATCTAAGTGGAAATATTCCCTCGAAAATTGGAAACTTGCGGTCGCTCGAATTCCTTGATCTCTCAGTCAACCACCTTTCGGGACAAATTCCTCAAAGTATTTCATCTTTAACCTATTTGTCTCACTTGAATTTGTCTTATAATGAATTGAGCGGAAGAATTCCTTTGGGCAACCAACTTCAAGCACTTGATGATTCAACCAATATTTATGGGGGCAATCCATCACTCTGTGGGTTTCCCCTTTTAAACAAGTGCCCAGGAGATGACACACCTCCACAACCCACTTTTCCTCGTGGGAAAAGACATGAAGATGATAAAAAGCTTGGTTTCTACATTAGCGTAGTGCTTGGCTTTGTCGTAGGCTTTTGGGGTGTTTGTGGCACATTACTCATAAAGAAGTCATGGAGGTATGCCTACTTTCAATTTTTTGATAGCATCCAAGACAAGGTAGCGGTGGCAATTGCATTGAAAATAGCCCATTTCCAGAGGAAAATTTAA

Protein Analysis

1068

Amino Acids

120.19

Weight (kDa)

7.31

Isoelectric Point (pI)

37.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 125 - 162 9.8e-11 Leucine rich repeat N-terminal domain
LRR_8 PF13855 212 - 270 5.8e-07 Leucine rich repeat
LRR_14 PF23598 274 - 514 9.5e-17 Leucine-rich repeat region
LRR_8 PF13855 316 - 372 9.4e-06 Leucine rich repeat
LRR_14 PF23598 879 - 951 4e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2850
Acc36I ACCTGC 1 cut(s) 1593
AccB7I CCANNNNNTGG 2 cut(s) 761, 1798
AccBSI CCGCTC 1 cut(s) 2862
AccII CGCG 1 cut(s) 389
AciI CCGC 8 cut(s) 490, 520, 1122, 1250, 1904, 2749, 2862, 3161
AclWI GGATC 3 cut(s) 1015, 1422, 1435
AcoI YGGCCR 1 cut(s) 1104
AcuI CTGAAG 4 cut(s) 573, 728, 900, 1530
AdeI CACNNNGTG 1 cut(s) 2939
AfaI GTAC 3 cut(s) 40, 1397, 2473
AfiI CCNNNNNNNGG 7 cut(s) 591, 761, 1374, 1798, 2289, 2788, 3154
AflII CTTAAG 1 cut(s) 1232
AflIII ACRYGT 1 cut(s) 916
AhlI ACTAGT 1 cut(s) 1711
AjnI CCWGG 2 cut(s) 558, 2965
AjuI GAANNNNNNNTTGG 4 cut(s) 1100, 1132, 1833, 1865
Alw21I GWGCWC 1 cut(s) 653
Alw26I GTCTC 6 cut(s) 727, 1726, 1870, 2157, 2678, 2835
AlwI GGATC 3 cut(s) 1015, 1422, 1435
AlwNI CAGNNNCTG 1 cut(s) 1662
AoxI GGCC 5 cut(s) 243, 349, 1104, 1961, 2265
ApeKI GCWGC 2 cut(s) 299, 2377
ArsI GACNNNNNNTTYG 6 cut(s) 445, 477, 548, 580, 1855, 1887
AseI ATTAAT 1 cut(s) 311
Asp700I GAANNNNTTC 2 cut(s) 978, 1115
AspLEI GCGC 2 cut(s) 389, 391
AspS9I GGNCC 6 cut(s) 243, 514, 886, 1124, 1673, 1961
AsuC2I CCSGG 1 cut(s) 1436
AsuHPI GGTGA 4 cut(s) 2264, 2429, 2578, 2660
AsuNHI GCTAGC 1 cut(s) 302
AvaII GGWCC 4 cut(s) 514, 886, 1124, 1673
AxyI CCTNAGG 1 cut(s) 1372
BaeGI GKGCMC 2 cut(s) 1579, 2966
BaeI ACNNNNGTAYC 2 cut(s) 2337, 2370
BalI TGGCCA 1 cut(s) 1106
BamHI GGATCC 1 cut(s) 1427
BanII GRGCYC 1 cut(s) 653
BauI CACGAG 1 cut(s) 3000
BbsI GAAGAC 2 cut(s) 561, 1181
Bbv12I GWGCWC 1 cut(s) 653
BbvI GCAGC 2 cut(s) 311, 2364
BceAI ACGGC 2 cut(s) 1909, 2390
BcgI CGANNNNNNTGC 2 cut(s) 1346, 1380
BciT130I CCWGG 2 cut(s) 560, 2967
BciVI GTATCC 2 cut(s) 2213, 2365
BclI TGATCA 1 cut(s) 1264
BcnI CCSGG 1 cut(s) 1436
BcoDI GTCTC 6 cut(s) 727, 1726, 1870, 2157, 2678, 2835
BcuI ACTAGT 1 cut(s) 1711
BfmI CTRYAG 1 cut(s) 53
BfrI CTTAAG 1 cut(s) 1232
BfuAI ACCTGC 1 cut(s) 1593
BfuI GTATCC 2 cut(s) 2213, 2365
BglII AGATCT 4 cut(s) 409, 1525, 2446, 2623
BisI GCNGC 2 cut(s) 300, 2378
BlpI GCTNAGC 1 cut(s) 617
BlsI GCNGC 2 cut(s) 301, 2379
Bme1390I CCNGG 3 cut(s) 560, 1436, 2967
Bme18I GGWCC 4 cut(s) 514, 886, 1124, 1673
BmgT120I GGNCC 6 cut(s) 243, 514, 886, 1124, 1673, 1961
BmiI GGNNCC 4 cut(s) 904, 1126, 1429, 1626
BmrFI CCNGG 3 cut(s) 560, 1436, 2967
BmrI ACTGGG 2 cut(s) 1562, 2184
BmsI GCATC 9 cut(s) 378, 409, 538, 953, 1368, 1597, 1749, 2020, 3153
BmtI GCTAGC 1 cut(s) 306
BmuI ACTGGG 2 cut(s) 1562, 2184
BpiI GAAGAC 2 cut(s) 561, 1181
BpmI CTGGAG 1 cut(s) 2127
Bpu10I CCTNAGC 1 cut(s) 890
Bpu1102I GCTNAGC 1 cut(s) 617
BpuEI CTTGAG 2 cut(s) 667, 2103
BpuMI CCSGG 1 cut(s) 1436
Bsa29I ATCGAT 1 cut(s) 417
BsaJI CCNNGG 4 cut(s) 1891, 2268, 2358, 2965
Bsc4I CCNNNNNNNGG 7 cut(s) 591, 761, 1374, 1798, 2289, 2788, 3154
Bse1I ACTGG 7 cut(s) 356, 499, 906, 1557, 1835, 2190, 2326
Bse21I CCTNAGG 1 cut(s) 1372
Bse3DI GCAATG 2 cut(s) 901, 1545
BseBI CCWGG 2 cut(s) 560, 2967
BseCI ATCGAT 1 cut(s) 417
BseDI CCNNGG 4 cut(s) 1891, 2268, 2358, 2965
BseGI GGATG 9 cut(s) 245, 516, 1294, 1383, 1431, 1588, 2045, 2381, 3144
BseLI CCNNNNNNNGG 7 cut(s) 591, 761, 1374, 1798, 2289, 2788, 3154
BseMI GCAATG 2 cut(s) 901, 1545
BseMII CTCAG 9 cut(s) 808, 883, 1102, 1449, 2190, 2279, 2481, 2594, 2787
BseNI ACTGG 7 cut(s) 356, 499, 906, 1557, 1835, 2190, 2326
BsePI GCGCGC 1 cut(s) 387
BseRI GAGGAG 1 cut(s) 2305
BseSI GKGCMC 2 cut(s) 1579, 2966
BseXI GCAGC 2 cut(s) 311, 2364
BseYI CCCAGC 2 cut(s) 171, 2409
Bsh1236I CGCG 1 cut(s) 389
Bsh1285I CGRYCG 2 cut(s) 1198, 2753
BshFI GGCC 5 cut(s) 245, 351, 1106, 1963, 2267
BshVI ATCGAT 1 cut(s) 417
BsiEI CGRYCG 2 cut(s) 1198, 2753
BsiHKAI GWGCWC 1 cut(s) 653
BsiSI CCGG 1 cut(s) 1436
BslFI GGGAC 4 cut(s) 756, 1110, 1461, 2805
BslI CCNNNNNNNGG 7 cut(s) 591, 761, 1374, 1798, 2289, 2788, 3154
BsmAI GTCTC 6 cut(s) 727, 1726, 1870, 2157, 2678, 2835
BsmFI GGGAC 4 cut(s) 756, 1110, 1461, 2805
BsnI GGCC 5 cut(s) 245, 351, 1106, 1963, 2267
Bsp1286I GDGCHC 3 cut(s) 653, 1579, 2966
Bsp1407I TGTACA 1 cut(s) 38
Bsp143I GATC 9 cut(s) 409, 1020, 1264, 1427, 1525, 2299, 2446, 2623, 2767
Bsp1720I GCTNAGC 1 cut(s) 617
BspACI CCGC 8 cut(s) 490, 520, 1122, 1250, 1904, 2749, 2862, 3161
BspANI GGCC 5 cut(s) 245, 351, 1106, 1963, 2267
BspCNI CTCAG 9 cut(s) 807, 882, 1101, 1450, 2189, 2280, 2480, 2595, 2786
BspDI ATCGAT 1 cut(s) 417
BspFNI CGCG 1 cut(s) 389
BspLI GGNNCC 4 cut(s) 904, 1126, 1429, 1626
BspMAI CTGCAG 1 cut(s) 57
BspMI ACCTGC 1 cut(s) 1593
BspOI GCTAGC 1 cut(s) 306
BspPI GGATC 3 cut(s) 1015, 1422, 1435
BspTI CTTAAG 1 cut(s) 1232
BsrBI CCGCTC 1 cut(s) 2862
BsrDI GCAATG 2 cut(s) 901, 1545
BsrGI TGTACA 1 cut(s) 38
BsrI ACTGG 7 cut(s) 356, 499, 906, 1557, 1835, 2190, 2326
BssECI CCNNGG 4 cut(s) 1891, 2268, 2358, 2965
BssHII GCGCGC 1 cut(s) 387
BssMI GATC 9 cut(s) 409, 1020, 1264, 1427, 1525, 2299, 2446, 2623, 2767
BssSI CACGAG 1 cut(s) 3000
BssT1I CCWWGG 2 cut(s) 2268, 2358
Bst2BI CACGAG 1 cut(s) 3000
Bst2UI CCWGG 2 cut(s) 560, 2967
Bst4CI ACNGT 2 cut(s) 1196, 1664
Bst6I CTCTTC 4 cut(s) 573, 857, 1412, 2572
BstAFI CTTAAG 1 cut(s) 1232
BstAPI GCANNNNNTGC 1 cut(s) 2008
BstAUI TGTACA 1 cut(s) 38
BstC8I GCNNGC 4 cut(s) 202, 304, 389, 1365
BstDSI CCRYGG 1 cut(s) 1891
BstEII GGTNACC 2 cut(s) 764, 2566
BstF5I GGATG 9 cut(s) 245, 516, 1294, 1383, 1431, 1588, 2045, 2381, 3144
BstFNI CGCG 1 cut(s) 389
BstHHI GCGC 2 cut(s) 389, 391
BstKTI GATC 9 cut(s) 412, 1023, 1267, 1430, 1528, 2302, 2449, 2626, 2770
BstMAI GTCTC 6 cut(s) 727, 1726, 1870, 2157, 2678, 2835
BstMBI GATC 9 cut(s) 409, 1020, 1264, 1427, 1525, 2299, 2446, 2623, 2767
BstMCI CGRYCG 2 cut(s) 1198, 2753
BstMWI GCNNNNNNNGC 6 cut(s) 225, 489, 657, 1256, 2008, 2427
BstNI CCWGG 2 cut(s) 560, 2967
BstNSI RCATGY 3 cut(s) 204, 920, 931
BstPI GGTNACC 2 cut(s) 764, 2566
BstSCI CCNGG 3 cut(s) 558, 1434, 2965
BstSFI CTRYAG 1 cut(s) 53
BstSLI GKGCMC 2 cut(s) 1579, 2966
BstUI CGCG 1 cut(s) 389
BstV1I GCAGC 2 cut(s) 311, 2364
BstV2I GAAGAC 2 cut(s) 561, 1181
BstX2I RGATCY 5 cut(s) 409, 1427, 1525, 2446, 2623
BstXI CCANNNNNNTGG 3 cut(s) 1764, 1823, 2197
BstYI RGATCY 5 cut(s) 409, 1427, 1525, 2446, 2623
Bsu15I ATCGAT 1 cut(s) 417
Bsu36I CCTNAGG 1 cut(s) 1372
BsuI GTATCC 2 cut(s) 2213, 2365
BsuRI GGCC 5 cut(s) 245, 351, 1106, 1963, 2267
BsuTUI ATCGAT 1 cut(s) 417
BtgI CCRYGG 1 cut(s) 1891
BtsCI GGATG 9 cut(s) 245, 516, 1294, 1383, 1431, 1588, 2045, 2381, 3144
BtsIMutI CAGTG 4 cut(s) 492, 802, 1550, 1579
BveI ACCTGC 1 cut(s) 1593
Cac8I GCNNGC 4 cut(s) 202, 304, 389, 1365
CaiI CAGNNNCTG 1 cut(s) 1662
CfoI GCGC 2 cut(s) 389, 391
Cfr13I GGNCC 6 cut(s) 243, 514, 886, 1124, 1673, 1961
ClaI ATCGAT 1 cut(s) 417
Csp6I GTAC 3 cut(s) 39, 1396, 2472
CviQI GTAC 3 cut(s) 39, 1396, 2472
DpnI GATC 9 cut(s) 411, 1022, 1266, 1429, 1527, 2301, 2448, 2625, 2769
DpnII GATC 9 cut(s) 409, 1020, 1264, 1427, 1525, 2299, 2446, 2623, 2767
DraI TTTAAA 1 cut(s) 2955
DraIII CACNNNGTG 1 cut(s) 2939
EaeI YGGCCR 1 cut(s) 1104
Eam1104I CTCTTC 4 cut(s) 573, 857, 1412, 2572
EarI CTCTTC 4 cut(s) 573, 857, 1412, 2572
Ecl136II GAGCTC 1 cut(s) 651
Eco130I CCWWGG 2 cut(s) 2268, 2358
Eco24I GRGCYC 1 cut(s) 653
Eco47I GGWCC 4 cut(s) 514, 886, 1124, 1673
Eco53kI GAGCTC 1 cut(s) 651
Eco57I CTGAAG 4 cut(s) 573, 728, 900, 1530
Eco81I CCTNAGG 1 cut(s) 1372
Eco91I GGTNACC 2 cut(s) 764, 2566
EcoICRI GAGCTC 1 cut(s) 651
EcoO109I RGGNCCY 1 cut(s) 1673
EcoO65I GGTNACC 2 cut(s) 764, 2566
EcoRI GAATTC 5 cut(s) 1111, 1200, 2582, 2759, 2868
EcoRII CCWGG 2 cut(s) 558, 2965
EcoT14I CCWWGG 2 cut(s) 2268, 2358
EcoT22I ATGCAT 1 cut(s) 371
EcoT38I GRGCYC 1 cut(s) 653
ErhI CCWWGG 2 cut(s) 2268, 2358
FalI AAGNNNNNCTT 8 cut(s) 259, 291, 873, 905, 1055, 1087, 2857, 2889
FaqI GGGAC 4 cut(s) 756, 1110, 1461, 2805
FauI CCCGC 2 cut(s) 1243, 1911
FbaI TGATCA 1 cut(s) 1264
Fnu4HI GCNGC 2 cut(s) 300, 2378
FokI GGATG 9 cut(s) 252, 523, 1301, 1390, 1418, 1575, 2032, 2368, 3131
FriOI GRGCYC 1 cut(s) 653
Fsp4HI GCNGC 2 cut(s) 300, 2378
GlaI GCGC 2 cut(s) 388, 390
GluI GCNGC 2 cut(s) 300, 2378
GsaI CCCAGC 2 cut(s) 175, 2413
GsuI CTGGAG 1 cut(s) 2127
HaeIII GGCC 5 cut(s) 245, 351, 1106, 1963, 2267
HapII CCGG 1 cut(s) 1436
HhaI GCGC 2 cut(s) 389, 391
Hin6I GCGC 2 cut(s) 387, 389
HinP1I GCGC 2 cut(s) 387, 389
HincII GTYRAC 4 cut(s) 925, 1147, 1974, 2779
HindII GTYRAC 4 cut(s) 925, 1147, 1974, 2779
HindIII AAGCTT 4 cut(s) 226, 1637, 1829, 3029
HpaI GTTAAC 3 cut(s) 925, 1147, 1974
HpaII CCGG 1 cut(s) 1436
HphI GGTGA 4 cut(s) 2264, 2429, 2578, 2660
Hpy166II GTNNAC 7 cut(s) 886, 925, 1147, 1974, 2213, 2399, 2779
Hpy188I TCNGA 6 cut(s) 708, 876, 1091, 1459, 1747, 2604
Hpy8I GTNNAC 7 cut(s) 886, 925, 1147, 1974, 2213, 2399, 2779
HpyCH4III ACNGT 2 cut(s) 1196, 1664
HpyCH4IV ACGT 1 cut(s) 2209
HpyF10VI GCNNNNNNNGC 6 cut(s) 225, 489, 657, 1256, 2008, 2427
HpySE526I ACGT 1 cut(s) 2209
HspAI GCGC 2 cut(s) 387, 389
Ksp22I TGATCA 1 cut(s) 1264
KspAI GTTAAC 3 cut(s) 925, 1147, 1974
Kzo9I GATC 9 cut(s) 409, 1020, 1264, 1427, 1525, 2299, 2446, 2623, 2767
LmnI GCTCC 3 cut(s) 541, 902, 1386
Lsp1109I GCAGC 2 cut(s) 311, 2364
LweI GCATC 9 cut(s) 378, 409, 538, 953, 1368, 1597, 1749, 2020, 3153
MaeII ACGT 1 cut(s) 2209
MaeIII GTNAC 9 cut(s) 158, 635, 764, 800, 948, 1323, 1861, 2138, 2566
MalI GATC 9 cut(s) 411, 1022, 1266, 1429, 1527, 2301, 2448, 2625, 2769
MbiI CCGCTC 1 cut(s) 2862
MboI GATC 9 cut(s) 409, 1020, 1264, 1427, 1525, 2299, 2446, 2623, 2767
MfeI CAATTG 2 cut(s) 2414, 3168
MflI RGATCY 5 cut(s) 409, 1427, 1525, 2446, 2623
MhlI GDGCHC 3 cut(s) 653, 1579, 2966
MlsI TGGCCA 1 cut(s) 1106
MluNI TGGCCA 1 cut(s) 1106
MlyI GAGTC 5 cut(s) 590, 1331, 1446, 1858, 2593
MmeI TCCRAC 3 cut(s) 1299, 1864, 2140
Mox20I TGGCCA 1 cut(s) 1106
Mph1103I ATGCAT 1 cut(s) 371
MroXI GAANNNNTTC 2 cut(s) 978, 1115
MscI TGGCCA 1 cut(s) 1106
MslI CAYNNNNRTG 3 cut(s) 1422, 2715, 3018
Msp20I TGGCCA 1 cut(s) 1106
MspA1I CMGCKG 1 cut(s) 1122
MspCI CTTAAG 1 cut(s) 1232
MspI CCGG 1 cut(s) 1436
MspR9I CCNGG 3 cut(s) 560, 1436, 2967
MunI CAATTG 2 cut(s) 2414, 3168
MvaI CCWGG 2 cut(s) 560, 2967
MvnI CGCG 1 cut(s) 389
MwoI GCNNNNNNNGC 6 cut(s) 225, 489, 657, 1256, 2008, 2427
NciI CCSGG 1 cut(s) 1436
NdeII GATC 9 cut(s) 409, 1020, 1264, 1427, 1525, 2299, 2446, 2623, 2767
NheI GCTAGC 1 cut(s) 302
NlaIV GGNNCC 4 cut(s) 904, 1126, 1429, 1626
NmuCI GTSAC 5 cut(s) 158, 1323, 1861, 2138, 2566
NsiI ATGCAT 1 cut(s) 371
NspI RCATGY 3 cut(s) 204, 920, 931
PaeI GCATGC 1 cut(s) 204
PauI GCGCGC 1 cut(s) 387
PciI ACATGT 1 cut(s) 916
PdmI GAANNNNTTC 2 cut(s) 978, 1115
PfeI GAWTC 5 cut(s) 748, 1748, 2041, 2707, 2903
PflMI CCANNNNNTGG 2 cut(s) 761, 1798
PfoI TCCNGGA 1 cut(s) 1434
PkrI GCNGC 2 cut(s) 301, 2379
PleI GAGTC 5 cut(s) 589, 1330, 1446, 1858, 2593
PpsI GAGTC 5 cut(s) 589, 1330, 1446, 1858, 2593
PpuMI RGGWCCY 1 cut(s) 1673
PscI ACATGT 1 cut(s) 916
PshBI ATTAAT 1 cut(s) 311
PsiI TTATAA 1 cut(s) 2850
Psp124BI GAGCTC 1 cut(s) 653
Psp5II RGGWCCY 1 cut(s) 1673
Psp6I CCWGG 2 cut(s) 558, 2965
PspEI GGTNACC 2 cut(s) 764, 2566
PspFI CCCAGC 2 cut(s) 171, 2409
PspGI CCWGG 2 cut(s) 558, 2965
PspN4I GGNNCC 4 cut(s) 904, 1126, 1429, 1626
PspPI GGNCC 6 cut(s) 243, 514, 886, 1124, 1673, 1961
PspPPI RGGWCCY 1 cut(s) 1673
PsrI GAACNNNNNNTAC 2 cut(s) 2194, 2226
PstI CTGCAG 1 cut(s) 57
PstNI CAGNNNCTG 1 cut(s) 1662
PsuI RGATCY 5 cut(s) 409, 1427, 1525, 2446, 2623
PteI GCGCGC 1 cut(s) 387
RsaI GTAC 3 cut(s) 40, 1397, 2473
RsaNI GTAC 3 cut(s) 39, 1396, 2472
RseI CAYNNNNRTG 3 cut(s) 1422, 2715, 3018
SacI GAGCTC 1 cut(s) 653
SatI GCNGC 2 cut(s) 300, 2378
Sau3AI GATC 9 cut(s) 409, 1020, 1264, 1427, 1525, 2299, 2446, 2623, 2767
Sau96I GGNCC 6 cut(s) 243, 514, 886, 1124, 1673, 1961
SchI GAGTC 5 cut(s) 590, 1331, 1446, 1858, 2593
ScrFI CCNGG 3 cut(s) 560, 1436, 2967
SduI GDGCHC 3 cut(s) 653, 1579, 2966
SfaNI GCATC 9 cut(s) 378, 409, 538, 953, 1368, 1597, 1749, 2020, 3153
SfcI CTRYAG 1 cut(s) 53
SinI GGWCC 4 cut(s) 514, 886, 1124, 1673
SmiMI CAYNNNNRTG 3 cut(s) 1422, 2715, 3018
SmlI CTYRAG 3 cut(s) 646, 1232, 2118
SmoI CTYRAG 3 cut(s) 646, 1232, 2118
SpeI ACTAGT 1 cut(s) 1711
SphI GCATGC 1 cut(s) 204
SsiI CCGC 8 cut(s) 490, 520, 1122, 1250, 1904, 2749, 2862, 3161
SspI AATATT 4 cut(s) 1796, 2185, 2725, 2914
SstI GAGCTC 1 cut(s) 653
StyD4I CCNGG 3 cut(s) 558, 1434, 2965
StyI CCWWGG 2 cut(s) 2268, 2358
TaaI ACNGT 2 cut(s) 1196, 1664
TaiI ACGT 1 cut(s) 2212
TatI WGTACW 1 cut(s) 38
TfiI GAWTC 5 cut(s) 748, 1748, 2041, 2707, 2903
TscAI CASTG 4 cut(s) 499, 802, 1557, 1579
TseFI GTSAC 5 cut(s) 158, 1323, 1861, 2138, 2566
TseI GCWGC 2 cut(s) 299, 2377
Tsp45I GTSAC 5 cut(s) 158, 1323, 1861, 2138, 2566
TspGWI ACGGA 1 cut(s) 1959
TspRI CASTG 4 cut(s) 499, 802, 1557, 1579
Van91I CCANNNNNTGG 2 cut(s) 761, 1798
Vha464I CTTAAG 1 cut(s) 1232
VpaK11BI GGWCC 4 cut(s) 514, 886, 1124, 1673
VspI ATTAAT 1 cut(s) 311
XbaI TCTAGA 3 cut(s) 959, 1471, 1867
XceI RCATGY 3 cut(s) 204, 920, 931
XcmI CCANNNNNNNNNTGG 1 cut(s) 1062
XmnI GAANNNNTTC 2 cut(s) 978, 1115
Zsp2I ATGCAT 1 cut(s) 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.