Rroxscaffold_1G00056510

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
78264621 .. 78268024
3404 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00056510.1

Sequence Viewer

Length: 2862 bp
ATGGATAGCTTCTGTGCAAACCTATTCAAGCCTACCAGCTATCGCTTCCTCATCAACAATGTTGCTCACTACTTGCTCTTTCTTTTTCTGGCATCTATATACCTGCAAACTACTAAACTGTGTTTGGGAGATGGACTTCCGAGTGATGTGAGGTCATCATCATGCATCGAGGAAGAGAGACGAGCGCTTCTCAGCTTCAAAGGAGATGTTACTGATCCTTCCGGTAGGCTTTCTTCTTGGGTGGGTCAGGATTGCTGTCAATGGAAGGGGATTCACTGCAACAACCATACAGGTCATGTTGCAAAGATGGACCTCCGAAACCTGAATTATGATCAAGAGTTCTACGGGGAGACTTCTTTGGGGGAGATTCCCCGAGCCCTTGGTAACCTCTCAATCTTGAACTATCTTGACCTCAATTCTAATAATTTTCCTTCTTCCAAAAACTTGAACTGGCTTTCTCATCTCTCTTCCCTAAAATACCTCAATCTTGGATATGTTGACCTTAGCAACACAGGAGTAAGTTGGCTAGATGATGTCAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTAATTGCCATATTCAAAACCTTCCACACTCCCAGCTGCGGTCAGTGAACTTCACATCCCTATTGGTTCTTGATATATCAGTTAACAATATTAATTCTTCATTTCCTAGCTGGTTTTCCAATCTTACCAATCTCAAAATTCTTGATCTATCGGACAATTGGTTAGCGGGTCCCTTCCCTTTTGAATTTGCAAACCTCAAGTCTTTGGAAGACCTTGATTTAAGCAGTACTACTTTTCTCCAAGGTCAAATTCCCAATGTCTTTGGTACTTTGTGCAGCCTAAGGATATTAGATCTTTCGTGGAACTCGTTCAACGGTGGTTTGGAAGAGGTTTTGAATGGTTTCTTAAACTGTACTAGTCATAGATTAGAGTCACTTTCTTTGGGCTACAGTACGGTGGAAGGTGAATTGCCTGCCGCCTTAGGAATGCTAGAAAATCTGAAGGACATTGTCCTCGGTGAAAACCAATTTTCTGGTTCAATTCCACATTCTATTGGTAATTTATCATCCTTGGAAACACTGGACATCTCTGGTAATAATTTGAGTGAGTCCATTCCTGAAAGTTTGGGAGAACTCTCTCAACTAGTTTACCTAGATCTATCCAAGAATTCGTGGGAAGGCAATATCACTGAAGCCCATTTCCGATCTCTCACAAAGTTGGAGTATTTTGCAGTCAGCACAGACCGACCTAGGCCCCTGAAATTTAACGTGGCTCAAGAGTGGGTTCCTCCCTTCAAGCTTGATTCAGTCGACATTGCCAACTGCAGGGTAGGTCCTGCCTTTGGGGTATGGCTTCAGTCTCAAACTGAATTAACGCATCTAAAGCTTAGTAATACTGGAATCTCATATTTCATACCAGAGGAATGGTTCTTGAAGATATCTTTCCAACTCACATCATTGGATTTATCTTATAACCAAATCCGTGGAAAGCTTCCATTTCACATGAACTCCCCATCTTTAGAGTATATAGATTTGAGTCATAATCAATTTGAGGGCCCTCTTCCACACTGGTCTAGTGACGCTGTCGACTATCTCGATCTTGGAAGCAATTTATTTTCCGGGCCAATTCCTTCAAATTATGATAAATTGTTGCCTAACTTGCAAGATTTGTATCTATCTGACAATCATCTGAATGATATATGGGTTGTAGATGTCTCAGACAACAATTTGTCTGGCAATTTCTCCAGTTCAATGGGTGTTCCGAGCTCACTAAACATACTGAATCTGAGCAAAAACAATTTTGGGGGTCAAATTCCTTCTTCTCTATTCCAAAACTGCAGCGATTTGCAGAGAATTGATCTCGGAGGCAATAGATTTACTGGAAGCATACCTTTATGGACAAGATCAAAAGTACATTCCGAATTGTATATGCTAAGATTGCGATCCAACTCTTTAAGCGGACATATCCCCAGTCGATTGTGCTCTCTTCAATCTCTTCAGATCATAGACCTTGGCCACAACAACTTTTCAGGGACCATTCCCAAGTGTTTGCATAATTTGACTGCTTTCGCCCATGGTAATGACCATGGATTCTCCTTCTTTTTGCCTGACTATCCTCAGATAACCAGCTTGACATTGAAGGGACAAGAACTTGTATATAACACCACTCTGTATTTGGTGAAAAGCATTGATTTCTCGTCAAATAACTTGGAAGGTGTAATCCCTGAAGAAATAAGCAGTCTCATTGCACTAGGTACATTGAACTTGTCAAGAAATCAATTGAGCGGAAACATTCCTTCGAAGATTGGAAACTTGCGATGGCTAGAAACTCTTGATCTCTCACACAATCACCTCTCCGGGCAGATTCCTCAGAGTTTCTCTTCATTAACCTCTTTGGCTCACTTGAACTTGTCTTTCAACAACTTGTCCGGAAGAATTCCTTCAGGTAACCAACTTCAAACACTTGATGATTCATCCATTTACGAGGGCAACCCATCCTTGTGTGGCGTTCCTCTTTTAACTGTCTGCCCTGGAGATGGCGCACTCGCACCAGCTGACCCTGAAGATGGTGATCATAATGATAGCGCTGATGAGAATCGGAAGATTGGTATCTATGTTAGCACTGTCCTCGGCTTCATCATAGGCTTTTGGAGTGTCTGTGGCACATTGGTTATGAAGAAATCATGGAGGTGCTCTCCATGTGGTTGCCCTTTGGTGCTGTTTGTGGTGGTGGTGAAGATGACGGCCAGTGTTATTGGGTTTGTTGGTGTCTTCATGATTTGGATTTTCTTTATAGTTTTTGGTACACGCGTGGAGAACTTTACCTTCTCCCTTTCTAGCAGAATATGGTAG

Protein Analysis

953

Amino Acids

105.72

Weight (kDa)

5.14

Isoelectric Point (pI)

38.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 57 - 94 3.2e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 149 - 318 1.6e-11 Leucine-rich repeat region
LRR_8 PF13855 183 - 243 1.4e-06 Leucine rich repeat
LRR_8 PF13855 312 - 371 1.2e-06 Leucine rich repeat
LRR_14 PF23598 313 - 466 3.1e-12 Leucine-rich repeat region
LRR_14 PF23598 740 - 830 1.1e-08 Leucine-rich repeat region
LRR_8 PF13855 773 - 812 6.9e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1482
Acc36I ACCTGC 1 cut(s) 111
AccBSI CCGCTC 1 cut(s) 2295
AccI GTMKAC 2 cut(s) 1320, 1596
AccII CGCG 1 cut(s) 2820
AccIII TCCGGA 1 cut(s) 2438
AciI CCGC 5 cut(s) 610, 737, 987, 1968, 2295
AclWI GGATC 2 cut(s) 209, 1947
AcoI YGGCCR 2 cut(s) 2023, 2754
AcsI RAATTY 7 cut(s) 708, 755, 819, 1177, 1271, 1821, 2445
AcuI CTGAAG 7 cut(s) 1031, 1221, 1349, 1991, 2256, 2436, 2592
AfaI GTAC 7 cut(s) 799, 838, 925, 964, 1923, 2266, 2815
AfeI AGCGCT 2 cut(s) 186, 2596
AfiI CCNNNNNNNGG 5 cut(s) 609, 1335, 1352, 2546, 2576
AflIII ACRYGT 1 cut(s) 2818
AhlI ACTAGT 2 cut(s) 926, 1153
AjnI CCWGG 1 cut(s) 2539
AjuI GAANNNNNNNTTGG 2 cut(s) 804, 836
AloI GAACNNNNNNTCC 2 cut(s) 611, 643
Alw21I GWGCWC 3 cut(s) 1778, 1994, 2705
Alw26I GTCTC 5 cut(s) 172, 344, 1374, 1729, 2255
AlwI GGATC 2 cut(s) 209, 1947
Ama87I CYCGRG 1 cut(s) 372
Aor13HI TCCGGA 1 cut(s) 2438
Aor51HI AGCGCT 2 cut(s) 186, 2596
AoxI GGCC 5 cut(s) 1262, 1564, 1631, 2023, 2754
ApaI GGGCCC 1 cut(s) 1568
ApeKI GCWGC 3 cut(s) 607, 846, 1848
ApoI RAATTY 7 cut(s) 708, 755, 819, 1177, 1271, 1821, 2445
ArsI GACNNNNNNTTYG 2 cut(s) 755, 787
AseI ATTAAT 1 cut(s) 663
Asp700I GAANNNNTTC 3 cut(s) 878, 911, 2449
AspA2I CCTAGG 1 cut(s) 1259
AspLEI GCGC 3 cut(s) 187, 2552, 2597
AspS9I GGNCC 8 cut(s) 310, 740, 1263, 1343, 1564, 1565, 1631, 2043
AsuC2I CCSGG 2 cut(s) 1630, 2368
AsuHPI GGTGA 6 cut(s) 986, 1040, 2200, 2351, 2591, 2755
AsuII TTCGAA 1 cut(s) 2309
AvaI CYCGRG 1 cut(s) 372
AvaII GGWCC 4 cut(s) 310, 740, 1343, 2043
AvrII CCTAGG 1 cut(s) 1259
AxyI CCTNAGG 2 cut(s) 851, 991
BaeGI GKGCMC 1 cut(s) 1568
BaeI ACNNNNGTAYC 2 cut(s) 2805, 2838
BalI TGGCCA 1 cut(s) 2025
BanII GRGCYC 3 cut(s) 379, 1568, 1778
BarI GAAGNNNNNNTAC 2 cut(s) 217, 249
BbsI GAAGAC 2 cut(s) 786, 2773
Bbv12I GWGCWC 3 cut(s) 1778, 1994, 2705
BbvI GCAGC 3 cut(s) 594, 858, 1860
BccI CCATC 7 cut(s) 125, 301, 1531, 2322, 2512, 2540, 2570
BceAI ACGGC 1 cut(s) 2769
BcgI CGANNNNNNTGC 2 cut(s) 2620, 2654
BciT130I CCWGG 1 cut(s) 2541
BclI TGATCA 2 cut(s) 331, 2581
BcnI CCSGG 2 cut(s) 1630, 2368
BcoDI GTCTC 5 cut(s) 172, 344, 1374, 1729, 2255
BcuI ACTAGT 2 cut(s) 926, 1153
BfmI CTRYAG 3 cut(s) 958, 1333, 1846
BfoI RGCGCY 2 cut(s) 188, 2598
BfuAI ACCTGC 1 cut(s) 111
BglII AGATCT 2 cut(s) 862, 1165
BisI GCNGC 4 cut(s) 608, 847, 987, 1849
BlnI CCTAGG 1 cut(s) 1259
BlsI GCNGC 4 cut(s) 609, 848, 988, 1850
BmcAI AGTACT 1 cut(s) 799
Bme1390I CCNGG 3 cut(s) 1630, 2368, 2541
Bme18I GGWCC 4 cut(s) 310, 740, 1343, 2043
BmeT110I CYCGRG 1 cut(s) 372
BmgT120I GGNCC 8 cut(s) 310, 740, 1263, 1343, 1564, 1565, 1631, 2043
BmiI GGNNCC 6 cut(s) 741, 742, 1265, 1296, 1566, 2044
BmrFI CCNGG 3 cut(s) 1630, 2368, 2541
BmrI ACTGGG 1 cut(s) 1974
BmsI GCATC 3 cut(s) 101, 174, 1396
BmuI ACTGGG 1 cut(s) 1974
BpiI GAAGAC 2 cut(s) 786, 2773
BplI GAGNNNNNCTC 4 cut(s) 174, 206, 2689, 2721
BpmI CTGGAG 2 cut(s) 1738, 2562
Bpu10I CCTNAGC 1 cut(s) 503
Bpu14I TTCGAA 1 cut(s) 2309
BpuEI CTTGAG 2 cut(s) 752, 1269
BpuMI CCSGG 2 cut(s) 1630, 2368
BsaBI GATNNNNATC 5 cut(s) 1680, 1951, 2580, 2604, 2618
BsaWI WCCGGW 2 cut(s) 221, 2438
BsaXI ACNNNNNCTCC 4 cut(s) 1502, 1532, 2653, 2683
Bsc4I CCNNNNNNNGG 5 cut(s) 609, 1335, 1352, 2546, 2576
Bse1I ACTGG 8 cut(s) 455, 1095, 1411, 1583, 1755, 1894, 1980, 2757
Bse21I CCTNAGG 2 cut(s) 851, 991
Bse3DI GCAATG 2 cut(s) 1323, 2253
Bse8I GATNNNNATC 5 cut(s) 1680, 1951, 2580, 2604, 2618
BseAI TCCGGA 1 cut(s) 2438
BseBI CCWGG 1 cut(s) 2541
BseGI GGATG 4 cut(s) 626, 1076, 2483, 2504
BseJI GATNNNNATC 5 cut(s) 1680, 1951, 2580, 2604, 2618
BseLI CCNNNNNNNGG 5 cut(s) 609, 1335, 1352, 2546, 2576
BseMI GCAATG 2 cut(s) 1323, 2253
BseMII CTCAG 5 cut(s) 205, 1740, 1787, 2141, 2393
BseNI ACTGG 8 cut(s) 455, 1095, 1411, 1583, 1755, 1894, 1980, 2757
BseSI GKGCMC 1 cut(s) 1568
BseXI GCAGC 3 cut(s) 594, 858, 1860
BseYI CCCAGC 1 cut(s) 603
BsgI GTGCAG 1 cut(s) 865
Bsh1236I CGCG 1 cut(s) 2820
BshFI GGCC 5 cut(s) 1264, 1566, 1633, 2025, 2756
BsiHKAI GWGCWC 3 cut(s) 1778, 1994, 2705
BsiHKCI CYCGRG 1 cut(s) 372
BsiSI CCGG 4 cut(s) 222, 1629, 2367, 2439
BslFI GGGAC 3 cut(s) 726, 2056, 2166
BslI CCNNNNNNNGG 5 cut(s) 609, 1335, 1352, 2546, 2576
BsmAI GTCTC 5 cut(s) 172, 344, 1374, 1729, 2255
BsmBI CGTCTC 1 cut(s) 172
BsmFI GGGAC 3 cut(s) 726, 2056, 2166
BsmI GAATGC 1 cut(s) 1002
BsnI GGCC 5 cut(s) 1264, 1566, 1633, 2025, 2756
BsoBI CYCGRG 1 cut(s) 372
Bsp119I TTCGAA 1 cut(s) 2309
Bsp120I GGGCCC 1 cut(s) 1564
Bsp1286I GDGCHC 5 cut(s) 379, 1568, 1778, 1994, 2705
Bsp13I TCCGGA 1 cut(s) 2438
Bsp19I CCATGG 2 cut(s) 2083, 2095
BspACI CCGC 5 cut(s) 610, 737, 987, 1968, 2295
BspANI GGCC 5 cut(s) 1264, 1566, 1633, 2025, 2756
BspCNI CTCAG 5 cut(s) 204, 1739, 1788, 2140, 2392
BspEI TCCGGA 1 cut(s) 2438
BspFNI CGCG 1 cut(s) 2820
BspHI TCATGA 1 cut(s) 2784
BspLI GGNNCC 6 cut(s) 741, 742, 1265, 1296, 1566, 2044
BspMAI CTGCAG 2 cut(s) 1337, 1850
BspMI ACCTGC 1 cut(s) 111
BspPI GGATC 2 cut(s) 209, 1947
BspT104I TTCGAA 1 cut(s) 2309
BsrBI CCGCTC 1 cut(s) 2295
BsrDI GCAATG 2 cut(s) 1323, 2253
BsrI ACTGG 8 cut(s) 455, 1095, 1411, 1583, 1755, 1894, 1980, 2757
BssT1I CCWWGG 7 cut(s) 379, 811, 1080, 1259, 2020, 2083, 2095
Bst2UI CCWGG 1 cut(s) 2541
Bst4CI ACNGT 7 cut(s) 120, 887, 923, 962, 967, 2533, 2635
Bst6I CTCTTC 7 cut(s) 168, 472, 891, 1575, 2001, 2010, 2395
BstBI TTCGAA 1 cut(s) 2309
BstC8I GCNNGC 1 cut(s) 984
BstDSI CCRYGG 3 cut(s) 1492, 2083, 2095
BstEII GGTNACC 2 cut(s) 383, 2456
BstF5I GGATG 4 cut(s) 626, 1076, 2483, 2504
BstFNI CGCG 1 cut(s) 2820
BstH2I RGCGCY 2 cut(s) 188, 2598
BstHHI GCGC 3 cut(s) 187, 2552, 2597
BstMAI GTCTC 5 cut(s) 172, 344, 1374, 1729, 2255
BstMWI GCNNNNNNNGC 3 cut(s) 1393, 1669, 1948
BstNI CCWGG 1 cut(s) 2541
BstNSI RCATGY 1 cut(s) 544
BstPI GGTNACC 2 cut(s) 383, 2456
BstSCI CCNGG 3 cut(s) 1628, 2366, 2539
BstSFI CTRYAG 3 cut(s) 958, 1333, 1846
BstSLI GKGCMC 1 cut(s) 1568
BstUI CGCG 1 cut(s) 2820
BstV1I GCAGC 3 cut(s) 594, 858, 1860
BstV2I GAAGAC 2 cut(s) 786, 2773
BstX2I RGATCY 2 cut(s) 862, 1165
BstXI CCANNNNNNTGG 4 cut(s) 1043, 1434, 1493, 1762
BstYI RGATCY 2 cut(s) 862, 1165
Bsu36I CCTNAGG 2 cut(s) 851, 991
BsuRI GGCC 5 cut(s) 1264, 1566, 1633, 2025, 2756
BtgI CCRYGG 3 cut(s) 1492, 2083, 2095
BtgZI GCGATG 1 cut(s) 2341
BtsCI GGATG 4 cut(s) 626, 1076, 2483, 2504
BtsI GCAGTG 1 cut(s) 274
BtsIMutI CAGTG 7 cut(s) 274, 621, 1088, 1197, 1576, 2631, 2764
BveI ACCTGC 1 cut(s) 111
Cac8I GCNNGC 1 cut(s) 984
CciI TCATGA 1 cut(s) 2784
CfoI GCGC 3 cut(s) 187, 2552, 2597
Cfr13I GGNCC 8 cut(s) 310, 740, 1263, 1343, 1564, 1565, 1631, 2043
CseI GACGC 1 cut(s) 1598
Csp6I GTAC 7 cut(s) 798, 837, 924, 963, 1922, 2265, 2814
CviAII CATG 9 cut(s) 162, 296, 541, 1513, 2084, 2096, 2694, 2709, 2785
CviQI GTAC 7 cut(s) 798, 837, 924, 963, 1922, 2265, 2814
EaeI YGGCCR 2 cut(s) 2023, 2754
Eam1104I CTCTTC 7 cut(s) 168, 472, 891, 1575, 2001, 2010, 2395
EarI CTCTTC 7 cut(s) 168, 472, 891, 1575, 2001, 2010, 2395
Ecl136II GAGCTC 1 cut(s) 1776
Eco130I CCWWGG 7 cut(s) 379, 811, 1080, 1259, 2020, 2083, 2095
Eco24I GRGCYC 3 cut(s) 379, 1568, 1778
Eco32I GATATC 1 cut(s) 1449
Eco47I GGWCC 4 cut(s) 310, 740, 1343, 2043
Eco47III AGCGCT 2 cut(s) 186, 2596
Eco53kI GAGCTC 1 cut(s) 1776
Eco57I CTGAAG 7 cut(s) 1031, 1221, 1349, 1991, 2256, 2436, 2592
Eco81I CCTNAGG 2 cut(s) 851, 991
Eco88I CYCGRG 1 cut(s) 372
Eco91I GGTNACC 2 cut(s) 383, 2456
EcoICRI GAGCTC 1 cut(s) 1776
EcoO109I RGGNCCY 5 cut(s) 740, 1263, 1343, 1564, 1565
EcoO65I GGTNACC 2 cut(s) 383, 2456
EcoRI GAATTC 2 cut(s) 1177, 2445
EcoRII CCWGG 1 cut(s) 2539
EcoRV GATATC 1 cut(s) 1449
EcoT14I CCWWGG 7 cut(s) 379, 811, 1080, 1259, 2020, 2083, 2095
EcoT22I ATGCAT 1 cut(s) 167
EcoT38I GRGCYC 3 cut(s) 379, 1568, 1778
ErhI CCWWGG 7 cut(s) 379, 811, 1080, 1259, 2020, 2083, 2095
Esp3I CGTCTC 1 cut(s) 172
FaeI CATG 9 cut(s) 165, 299, 544, 1516, 2087, 2099, 2697, 2712, 2788
FalI AAGNNNNNCTT 4 cut(s) 1885, 1917, 2434, 2466
FaqI GGGAC 3 cut(s) 726, 2056, 2166
FatI CATG 9 cut(s) 161, 295, 540, 1512, 2083, 2095, 2693, 2708, 2784
FauI CCCGC 1 cut(s) 730
FbaI TGATCA 2 cut(s) 331, 2581
FblI GTMKAC 2 cut(s) 1320, 1596
Fnu4HI GCNGC 4 cut(s) 608, 847, 987, 1849
FokI GGATG 4 cut(s) 613, 1063, 2470, 2491
FriOI GRGCYC 3 cut(s) 379, 1568, 1778
Fsp4HI GCNGC 4 cut(s) 608, 847, 987, 1849
GlaI GCGC 3 cut(s) 186, 2551, 2596
GluI GCNGC 4 cut(s) 608, 847, 987, 1849
GsaI CCCAGC 1 cut(s) 607
GsuI CTGGAG 2 cut(s) 1738, 2562
HaeII RGCGCY 2 cut(s) 188, 2598
HaeIII GGCC 5 cut(s) 1264, 1566, 1633, 2025, 2756
HapII CCGG 4 cut(s) 222, 1629, 2367, 2439
HgaI GACGC 1 cut(s) 1598
HhaI GCGC 3 cut(s) 187, 2552, 2597
Hin1II CATG 9 cut(s) 165, 299, 544, 1516, 2087, 2099, 2697, 2712, 2788
Hin6I GCGC 3 cut(s) 185, 2550, 2595
HinP1I GCGC 3 cut(s) 185, 2550, 2595
HincII GTYRAC 5 cut(s) 499, 538, 655, 1321, 1597
HindII GTYRAC 5 cut(s) 499, 538, 655, 1321, 1597
HindIII AAGCTT 3 cut(s) 1307, 1394, 1499
HpaI GTTAAC 1 cut(s) 655
HpaII CCGG 4 cut(s) 222, 1629, 2367, 2439
HphI GGTGA 6 cut(s) 986, 1040, 2200, 2351, 2591, 2755
Hpy166II GTNNAC 8 cut(s) 499, 538, 619, 655, 1159, 1321, 1597, 2816
Hpy8I GTNNAC 8 cut(s) 499, 538, 619, 655, 1159, 1321, 1597, 2816
HpyCH4III ACNGT 7 cut(s) 120, 887, 923, 962, 967, 2533, 2635
HpyCH4IV ACGT 1 cut(s) 1278
HpyF10VI GCNNNNNNNGC 3 cut(s) 1393, 1669, 1948
HpySE526I ACGT 1 cut(s) 1278
Hsp92II CATG 9 cut(s) 165, 299, 544, 1516, 2087, 2099, 2697, 2712, 2788
HspAI GCGC 3 cut(s) 185, 2550, 2595
KflI GGGWCCC 1 cut(s) 740
Kpn2I TCCGGA 1 cut(s) 2438
Ksp22I TGATCA 2 cut(s) 331, 2581
KspAI GTTAAC 1 cut(s) 655
Lsp1109I GCAGC 3 cut(s) 594, 858, 1860
LweI GCATC 3 cut(s) 101, 174, 1396
MaeII ACGT 1 cut(s) 1278
MaeIII GTNAC 5 cut(s) 208, 383, 942, 1586, 2456
MbiI CCGCTC 1 cut(s) 2295
MfeI CAATTG 2 cut(s) 727, 2288
MflI RGATCY 2 cut(s) 862, 1165
MhlI GDGCHC 5 cut(s) 379, 1568, 1778, 1994, 2705
MlsI TGGCCA 1 cut(s) 2025
MluI ACGCGT 1 cut(s) 2818
MluNI TGGCCA 1 cut(s) 2025
MlyI GAGTC 3 cut(s) 950, 1127, 1555
MmeI TCCRAC 3 cut(s) 1209, 1480, 1980
Mox20I TGGCCA 1 cut(s) 2025
Mph1103I ATGCAT 1 cut(s) 167
MroI TCCGGA 1 cut(s) 2438
MroXI GAANNNNTTC 3 cut(s) 878, 911, 2449
MscI TGGCCA 1 cut(s) 2025
MseI TTAA 9 cut(s) 654, 663, 791, 917, 1275, 1382, 1964, 2396, 2528
MslI CAYNNNNRTG 5 cut(s) 160, 1701, 2088, 2509, 2698
Msp20I TGGCCA 1 cut(s) 2025
MspA1I CMGCKG 2 cut(s) 607, 2564
MspI CCGG 4 cut(s) 222, 1629, 2367, 2439
MspR9I CCNGG 3 cut(s) 1630, 2368, 2541
MunI CAATTG 2 cut(s) 727, 2288
Mva1269I GAATGC 1 cut(s) 1002
MvaI CCWGG 1 cut(s) 2541
MvnI CGCG 1 cut(s) 2820
MwoI GCNNNNNNNGC 3 cut(s) 1393, 1669, 1948
NciI CCSGG 2 cut(s) 1630, 2368
NcoI CCATGG 2 cut(s) 2083, 2095
NlaIII CATG 9 cut(s) 165, 299, 544, 1516, 2087, 2099, 2697, 2712, 2788
NlaIV GGNNCC 6 cut(s) 741, 742, 1265, 1296, 1566, 2044
NmeAIII GCCGAG 1 cut(s) 2619
NmuCI GTSAC 2 cut(s) 942, 1586
NsiI ATGCAT 1 cut(s) 167
NspI RCATGY 1 cut(s) 544
NspV TTCGAA 1 cut(s) 2309
PagI TCATGA 1 cut(s) 2784
PcsI WCGNNNNNNNCGW 2 cut(s) 875, 1602
PctI GAATGC 1 cut(s) 1002
PdmI GAANNNNTTC 3 cut(s) 878, 911, 2449
PfeI GAWTC 9 cut(s) 271, 367, 1313, 1410, 1792, 2100, 2374, 2480, 2605
PflFI GACNNNGTC 2 cut(s) 1019, 1592
PkrI GCNGC 4 cut(s) 609, 848, 988, 1850
PleI GAGTC 3 cut(s) 949, 1126, 1554
PpsI GAGTC 3 cut(s) 949, 1126, 1554
PpuMI RGGWCCY 2 cut(s) 740, 1343
PshBI ATTAAT 1 cut(s) 663
PsiI TTATAA 1 cut(s) 1482
Psp124BI GAGCTC 1 cut(s) 1778
Psp5II RGGWCCY 2 cut(s) 740, 1343
Psp6I CCWGG 1 cut(s) 2539
PspEI GGTNACC 2 cut(s) 383, 2456
PspFI CCCAGC 1 cut(s) 603
PspGI CCWGG 1 cut(s) 2539
PspN4I GGNNCC 6 cut(s) 741, 742, 1265, 1296, 1566, 2044
PspOMI GGGCCC 1 cut(s) 1564
PspPI GGNCC 8 cut(s) 310, 740, 1263, 1343, 1564, 1565, 1631, 2043
PspPPI RGGWCCY 2 cut(s) 740, 1343
PstI CTGCAG 2 cut(s) 1337, 1850
PsuI RGATCY 2 cut(s) 862, 1165
PsyI GACNNNGTC 2 cut(s) 1019, 1592
PvuII CAGCTG 2 cut(s) 607, 2564
RsaI GTAC 7 cut(s) 799, 838, 925, 964, 1923, 2266, 2815
RsaNI GTAC 7 cut(s) 798, 837, 924, 963, 1922, 2265, 2814
RseI CAYNNNNRTG 5 cut(s) 160, 1701, 2088, 2509, 2698
SacI GAGCTC 1 cut(s) 1778
SalI GTCGAC 2 cut(s) 1319, 1595
SaqAI TTAA 9 cut(s) 654, 663, 791, 917, 1275, 1382, 1964, 2396, 2528
SatI GCNGC 4 cut(s) 608, 847, 987, 1849
Sau96I GGNCC 8 cut(s) 310, 740, 1263, 1343, 1564, 1565, 1631, 2043
ScaI AGTACT 1 cut(s) 799
SchI GAGTC 3 cut(s) 950, 1127, 1555
ScrFI CCNGG 3 cut(s) 1630, 2368, 2541
SduI GDGCHC 5 cut(s) 379, 1568, 1778, 1994, 2705
SfaNI GCATC 3 cut(s) 101, 174, 1396
SfcI CTRYAG 3 cut(s) 958, 1333, 1846
SfuI TTCGAA 1 cut(s) 2309
SinI GGWCC 4 cut(s) 310, 740, 1343, 2043
SmiMI CAYNNNNRTG 5 cut(s) 160, 1701, 2088, 2509, 2698
SmlI CTYRAG 2 cut(s) 767, 1284
SmoI CTYRAG 2 cut(s) 767, 1284
SpeI ACTAGT 2 cut(s) 926, 1153
SsiI CCGC 5 cut(s) 610, 737, 987, 1968, 2295
SspI AATATT 1 cut(s) 661
SstI GAGCTC 1 cut(s) 1778
StyD4I CCNGG 3 cut(s) 1628, 2366, 2539
StyI CCWWGG 7 cut(s) 379, 811, 1080, 1259, 2020, 2083, 2095
TaaI ACNGT 7 cut(s) 120, 887, 923, 962, 967, 2533, 2635
TaiI ACGT 1 cut(s) 1281
TaqI TCGA 6 cut(s) 168, 1320, 1596, 1605, 1984, 2309
TaqII GACCGA 1 cut(s) 1269
TatI WGTACW 3 cut(s) 797, 923, 1921
TauI GCSGC 1 cut(s) 989
TfiI GAWTC 9 cut(s) 271, 367, 1313, 1410, 1792, 2100, 2374, 2480, 2605
Tru1I TTAA 9 cut(s) 654, 663, 791, 917, 1275, 1382, 1964, 2396, 2528
Tru9I TTAA 9 cut(s) 654, 663, 791, 917, 1275, 1382, 1964, 2396, 2528
TscAI CASTG 7 cut(s) 281, 621, 1095, 1204, 1583, 2638, 2764
TseFI GTSAC 2 cut(s) 942, 1586
TseI GCWGC 3 cut(s) 607, 846, 1848
Tsp45I GTSAC 2 cut(s) 942, 1586
TspDTI ATGAA 8 cut(s) 660, 1411, 1529, 2382, 2472, 2635, 2699, 2773
TspGWI ACGGA 1 cut(s) 1481
TspRI CASTG 7 cut(s) 281, 621, 1095, 1204, 1583, 2638, 2764
Tth111I GACNNNGTC 2 cut(s) 1019, 1592
VpaK11BI GGWCC 4 cut(s) 310, 740, 1343, 2043
VspI ATTAAT 1 cut(s) 663
XapI RAATTY 7 cut(s) 708, 755, 819, 1177, 1271, 1821, 2445
XceI RCATGY 1 cut(s) 544
XcmI CCANNNNNNNNNTGG 1 cut(s) 2182
XmaJI CCTAGG 1 cut(s) 1259
XmiI GTMKAC 2 cut(s) 1320, 1596
XmnI GAANNNNTTC 3 cut(s) 878, 911, 2449
ZrmI AGTACT 1 cut(s) 799
Zsp2I ATGCAT 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.