MD10G1222400.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
32083638 .. 32086317
2680 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1222400.v1.1.491

Sequence Viewer

Length: 2397 bp
ATGAGTCTCCAGAATCCATACATATATACACTATCGGTCTTTGATGCAGCGCAAGATGAGATGGAGTACTCGTCGTTGGGTGGTAAGATAAATCCTTCTTTGCTTAGCTTGAAGCATTTGAATTACTTAGATCTAAGCCAGAATGATTTTCGAGGGATTCACATTCCCGAATTCTTTGGCCAGCTAAAAAATTTGAGGTATCTCAATCTCTCCTCAGCTTCATTTGGAGGAGAGATTCCACCTCATCTTGGTAACTTGTCACATTTGAACCATCTTCATCTCAGTGAAGAGTCTGACTACTCCTTACTTAAACTACCTTCCGAAAACTTGAATTGGCTTTCTCGTCTCTCTTCCCTAAAATACCTCAATCTTGAAGGGTTGGACCTCAGCAACACAAGTTGCCTACATAATTTTAACATGCTTCCCTCCCTACTTGAATTACACTTGCCATCATGCGAAATTGAAAGCCTTCCACTCTCACTCAAAAACATTAGCCTCATATCACTTTTGGTCCTTGGCGTGTCGTATAACGATTGGAAGTTTCCATTTCCTGATTGGTTTTTCAGTCTTGGTAGCATCACAAAAATGGATTTAAGTGGGAACTCGTTGATTGGTCCCTTTCCCATTGAACTTGAGAGCCTCAAATCACTTGAACACCTTCATTTATCTTTCAATGGACTTAAAGGTCGAATTCCCATGCTTGAAAATTTTTGCAGTCTAAAGACCTTAAATCTTGCCAGCAACAAATTTGATGGGGGGATTCAAGAGCTGTTCGACGGATTATCAAGTTGTCCCAATAGAAAACTCAAGTCACTAGATTTGTCTTCTAATATGCTGCAAAGCAATTTGCCGGCGTCCTTGGGGATGCTACGCAATTTGAAGTATCTCAGCCTCTATAACAATCTTATGAATGGGTCCATTCCTGAAAGTTTAGGACAACTTCCTGAGCTAGTTCACCTCGATCTGTCGTTCAACCCGTGGGTAAGCATTTTGACTGAATCCCATTTCATGAACCTCACAAGATTGAAATACTTTGCATTAGGCAGAGTGGATCCATACCCAACTCTACCTATTCACCTCAGTTTCAATGTGTCTTATAATTGGGTACCTCCTTTCATGCTTCACACAATCAACATTGCGAACTGTAAAGTAGGTCGTACCTTTGGGGTATGGCTTCAATCTGAAACTGAACTAGTCTTTGTCAAACTTCAGGGTACTGGGATTTCCAATTCTATACCAAAGCACTGGTTCTTGAAATTATCTTCCAACGTCGAATATTTGGATTTTATCTTACAACCAAATCACTGGAAACCTTCCAATGGAATTGAATTTTCGGAATACTCTAATTTTGGATATGCTGCACACAACAATCTCTCAGGCAAACTTCCTAGTTCGATTGGTGTCCCGGGCGCTCTTTTCGGGTTGAAGCTGAACAACAACAACTTCGATGGTGAAATTCCTCTTTCCTTGCAAAATTGCACTTCTTTGAGGCATATTGATCTCGGAGATAACAAATTCACTGGAAAAATACCTTCATGGATAGGATCAAGGGTGCCACTGGTATCGATCTTACGACTGCGGTCCAATTTTTTCGGTGGAGAAGTTCCCCAACAGTTGTGCAATCTTGGCTACCTTCATATCCTAGACCTTGCACACAACAACTTTTCAGGGACTATTCCTAAGTGCTTGAATAAACTGAGTGCTCTGACGCATGGAAATTTCAGTGCTTATGACTTATATGCTTTTTATGACCAAGAAACATCAGTGGTGAAAGTAAGACAACTCGACTATCAGCCGCAGACTATAATGTTCGTAAGAAGCATTGATCTTTCATCGAATAACCTCGAAGGTGAAATCCCTGAAGAAATATCCAGCCTCGCTCTACTGCATAACTTGAACTTGTCGATGAACCAATTGAGAGGAAGCATTCCATCAAAGATTGGGAACTTGATGTTGCTCGAAGCTCTTGATCTTTCGATCAACCACCTTTCAGGAGAGATTCCTCAAAGTATTTCACTTCCGACGTTCTTGTCTCACTTGAACTTGTCTTATAACAACTTGACCGGTAGAATTCCTTCGGGCAGCCAACTTCAGACACTCACGGATCCATCCATTTACGAGGGTAACCCGTCACTGTGTGGGGTTCCTCTTTCAACCAAGTGTCCCGGAGATGATCACACTCCTACAAAAGACAATGATCATGAAGATGGAAATGATAAGTTTTGGTTCTACGTTAGCATAGCACTCGGATTTATCGTAGGTTTTTGGGGTGTTTGTGGCAGATTAGTCGTCAAGAAGACATGGAGGTATGCTTATTTTGGATGGTTCGATGCCATTAAAGATAAGGTACTGCTAGCAATTGCAGTGCAAATGGCTCGTTTTCAAAGGAAGGTTTGA

Protein Analysis

799

Amino Acids

89.43

Weight (kDa)

6.23

Isoelectric Point (pI)

41.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 29 - 97 1.9e-06 Leucine-rich repeat region
LRR_14 PF23598 108 - 345 3e-12 Leucine-rich repeat region
LRR_8 PF13855 171 - 227 3.9e-06 Leucine rich repeat
LRR_4 PF12799 215 - 249 7.2e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 267 - 326 3.3e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1098, 2052
AasI GACNNNNNNGTC 2 cut(s) 684, 2029
Acc65I GGTACC 1 cut(s) 1105
AccB1I GGYRCC 2 cut(s) 1105, 1552
AciI CCGC 2 cut(s) 1579, 1796
AclWI GGATC 5 cut(s) 1046, 1059, 1552, 2099, 2112
AcoI YGGCCR 1 cut(s) 178
AcuI CTGAAG 3 cut(s) 1193, 1881, 2075
AcyI GRCGYC 1 cut(s) 854
AdeI CACNNNGTG 1 cut(s) 2138
AfaI GTAC 5 cut(s) 68, 1107, 1159, 1216, 2349
AfiI CCNNNNNNNGG 2 cut(s) 248, 1319
AgeI ACCGGT 1 cut(s) 2063
AhlI ACTAGT 1 cut(s) 1192
AluBI AGCT 7 cut(s) 108, 184, 218, 769, 949, 1429, 1964
AluI AGCT 7 cut(s) 108, 184, 218, 769, 949, 1429, 1964
Alw21I GWGCWC 1 cut(s) 1705
Alw26I GTCTC 3 cut(s) 11, 350, 2037
AlwI GGATC 5 cut(s) 1046, 1059, 1552, 2099, 2112
Ama87I CYCGRG 1 cut(s) 1405
AoxI GGCC 1 cut(s) 178
ApeKI GCWGC 4 cut(s) 47, 835, 1358, 2082
AsiGI ACCGGT 1 cut(s) 2063
Asp700I GAANNNNTTC 3 cut(s) 468, 657, 2074
Asp718I GGTACC 1 cut(s) 1105
AspLEI GCGC 2 cut(s) 52, 1412
AspS9I GGNCC 5 cut(s) 382, 511, 614, 915, 1581
AsuC2I CCSGG 3 cut(s) 1406, 1407, 2166
AsuHPI GGTGA 5 cut(s) 947, 1067, 1463, 1780, 1862
AsuNHI GCTAGC 1 cut(s) 2353
AvaI CYCGRG 1 cut(s) 1405
AvaII GGWCC 5 cut(s) 382, 511, 614, 915, 1581
BalI TGGCCA 1 cut(s) 180
BamHI GGATCC 2 cut(s) 1051, 2104
BanI GGYRCC 2 cut(s) 1105, 1552
BarI GAAGNNNNNNTAC 2 cut(s) 2059, 2091
BbsI GAAGAC 2 cut(s) 816, 2303
Bbv12I GWGCWC 1 cut(s) 1705
BbvCI CCTCAGC 2 cut(s) 214, 386
BbvI GCAGC 4 cut(s) 59, 822, 1345, 2094
BccI CCATC 9 cut(s) 55, 279, 457, 746, 1442, 1939, 2116, 2201, 2316
BcgI CGANNNNNNTGC 6 cut(s) 2227, 2261, 2269, 2303, 2357, 2391
BclI TGATCA 2 cut(s) 2173, 2197
BcnI CCSGG 3 cut(s) 1406, 1407, 2166
BcoDI GTCTC 3 cut(s) 11, 350, 2037
BcuI ACTAGT 1 cut(s) 1192
BfaI CTAG 6 cut(s) 815, 950, 1193, 1389, 1643, 2354
BfoI RGCGCY 1 cut(s) 1413
BglII AGATCT 1 cut(s) 130
BisI GCNGC 5 cut(s) 48, 836, 1359, 1796, 2083
BlpI GCTNAGC 1 cut(s) 104
BlsI GCNGC 5 cut(s) 49, 837, 1360, 1797, 2084
BmcAI AGTACT 1 cut(s) 68
Bme1390I CCNGG 3 cut(s) 1406, 1407, 2166
Bme18I GGWCC 5 cut(s) 382, 511, 614, 915, 1581
BmeT110I CYCGRG 1 cut(s) 1405
BmgT120I GGNCC 5 cut(s) 382, 511, 614, 915, 1581
BmiI GGNNCC 7 cut(s) 616, 916, 1053, 1107, 1554, 2106, 2145
BmrFI CCNGG 3 cut(s) 1406, 1407, 2166
BmrI ACTGGG 1 cut(s) 1227
BmsI GCATC 4 cut(s) 34, 585, 855, 2320
BmtI GCTAGC 1 cut(s) 2357
BmuI ACTGGG 1 cut(s) 1227
BoxI GACNNNNGTC 1 cut(s) 1579
BpiI GAAGAC 2 cut(s) 816, 2303
Bpu10I CCTNAGC 3 cut(s) 214, 386, 945
Bpu1102I GCTNAGC 1 cut(s) 104
BpuEI CTTGAG 2 cut(s) 653, 791
BpuMI CCSGG 3 cut(s) 1406, 1407, 2166
Bsa29I ATCGAT 1 cut(s) 1565
BsaHI GRCGYC 1 cut(s) 854
BsaJI CCNNGG 4 cut(s) 514, 858, 977, 1405
BsaWI WCCGGW 1 cut(s) 2063
BsaXI ACNNNNNCTCC 2 cut(s) 56, 86
Bsc4I CCNNNNNNNGG 2 cut(s) 248, 1319
Bse118I RCCGGY 2 cut(s) 850, 2063
Bse1I ACTGG 5 cut(s) 1222, 1250, 1310, 1525, 1563
Bse3DI GCAATG 1 cut(s) 1134
BseCI ATCGAT 1 cut(s) 1565
BseDI CCNNGG 4 cut(s) 514, 858, 977, 1405
BseGI GGATG 3 cut(s) 870, 2108, 2327
BseLI CCNNNNNNNGG 2 cut(s) 248, 1319
BseMI GCAATG 1 cut(s) 1134
BseMII CTCAG 8 cut(s) 228, 295, 400, 901, 936, 1093, 1389, 1688
BseNI ACTGG 5 cut(s) 1222, 1250, 1310, 1525, 1563
BseRI GAGGAG 2 cut(s) 202, 243
BseXI GCAGC 4 cut(s) 59, 822, 1345, 2094
BsgI GTGCAG 1 cut(s) 1344
BshFI GGCC 1 cut(s) 180
BshNI GGYRCC 2 cut(s) 1105, 1552
BshTI ACCGGT 1 cut(s) 2063
BshVI ATCGAT 1 cut(s) 1565
BsiHKAI GWGCWC 1 cut(s) 1705
BsiHKCI CYCGRG 1 cut(s) 1405
BsiSI CCGG 4 cut(s) 851, 1406, 2064, 2166
BslFI GGGAC 5 cut(s) 600, 777, 1388, 1684, 2148
BslI CCNNNNNNNGG 2 cut(s) 248, 1319
BsmAI GTCTC 3 cut(s) 11, 350, 2037
BsmBI CGTCTC 1 cut(s) 350
BsmFI GGGAC 5 cut(s) 600, 777, 1388, 1684, 2148
BsmI GAATGC 1 cut(s) 1926
BsnI GGCC 1 cut(s) 180
BsoBI CYCGRG 1 cut(s) 1405
Bsp1286I GDGCHC 1 cut(s) 1705
Bsp1720I GCTNAGC 1 cut(s) 104
BspACI CCGC 2 cut(s) 1579, 1796
BspANI GGCC 1 cut(s) 180
BspCNI CTCAG 8 cut(s) 227, 294, 399, 900, 937, 1092, 1388, 1689
BspDI ATCGAT 1 cut(s) 1565
BspHI TCATGA 2 cut(s) 1008, 2200
BspLI GGNNCC 7 cut(s) 616, 916, 1053, 1107, 1554, 2106, 2145
BspOI GCTAGC 1 cut(s) 2357
BspPI GGATC 5 cut(s) 1046, 1059, 1552, 2099, 2112
BspT107I GGYRCC 2 cut(s) 1105, 1552
BsrDI GCAATG 1 cut(s) 1134
BsrFI RCCGGY 2 cut(s) 850, 2063
BsrI ACTGG 5 cut(s) 1222, 1250, 1310, 1525, 1563
BssAI RCCGGY 2 cut(s) 850, 2063
BssECI CCNNGG 4 cut(s) 514, 858, 977, 1405
BssNI GRCGYC 1 cut(s) 854
BssT1I CCWWGG 2 cut(s) 514, 858
Bst4CI ACNGT 3 cut(s) 1145, 1614, 2136
Bst6I CTCTTC 2 cut(s) 282, 355
BstACI GRCGYC 1 cut(s) 854
BstC8I GCNNGC 4 cut(s) 182, 739, 852, 2355
BstDSI CCRYGG 1 cut(s) 977
BstEII GGTNACC 1 cut(s) 2123
BstF5I GGATG 3 cut(s) 870, 2108, 2327
BstH2I RGCGCY 1 cut(s) 1413
BstHHI GCGC 2 cut(s) 52, 1412
BstMAI GTCTC 3 cut(s) 11, 350, 2037
BstMWI GCNNNNNNNGC 1 cut(s) 1626
BstNSI RCATGY 1 cut(s) 421
BstPAI GACNNNNGTC 1 cut(s) 1579
BstPI GGTNACC 1 cut(s) 2123
BstSCI CCNGG 3 cut(s) 1404, 1405, 2164
BstV1I GCAGC 4 cut(s) 59, 822, 1345, 2094
BstV2I GAAGAC 2 cut(s) 816, 2303
BstX2I RGATCY 3 cut(s) 130, 1051, 2104
BstXI CCANNNNNNTGG 2 cut(s) 1245, 1305
BstYI RGATCY 3 cut(s) 130, 1051, 2104
Bsu15I ATCGAT 1 cut(s) 1565
BsuRI GGCC 1 cut(s) 180
BsuTUI ATCGAT 1 cut(s) 1565
BtgI CCRYGG 1 cut(s) 977
BtsCI GGATG 3 cut(s) 870, 2108, 2327
BtsI GCAGTG 1 cut(s) 2370
BtsIMutI CAGTG 9 cut(s) 289, 1243, 1303, 1518, 1556, 1729, 1770, 2132, 2370
Cac8I GCNNGC 4 cut(s) 182, 739, 852, 2355
CciI TCATGA 2 cut(s) 1008, 2200
CfoI GCGC 2 cut(s) 52, 1412
Cfr10I RCCGGY 2 cut(s) 850, 2063
Cfr13I GGNCC 5 cut(s) 382, 511, 614, 915, 1581
Cfr9I CCCGGG 1 cut(s) 1405
ClaI ATCGAT 1 cut(s) 1565
CseI GACGC 2 cut(s) 843, 1717
Csp6I GTAC 5 cut(s) 67, 1106, 1158, 1215, 2348
CspAI ACCGGT 1 cut(s) 2063
CviAII CATG 9 cut(s) 418, 453, 697, 1009, 1117, 1536, 1712, 2201, 2301
CviQI GTAC 5 cut(s) 67, 1106, 1158, 1215, 2348
DraIII CACNNNGTG 1 cut(s) 2138
DrdI GACNNNNNNGTC 2 cut(s) 684, 2029
DseDI GACNNNNNNGTC 2 cut(s) 684, 2029
EaeI YGGCCR 1 cut(s) 178
Eam1104I CTCTTC 2 cut(s) 282, 355
EarI CTCTTC 2 cut(s) 282, 355
Eco130I CCWWGG 2 cut(s) 514, 858
Eco47I GGWCC 5 cut(s) 382, 511, 614, 915, 1581
Eco57I CTGAAG 3 cut(s) 1193, 1881, 2075
Eco88I CYCGRG 1 cut(s) 1405
Eco91I GGTNACC 1 cut(s) 2123
EcoO65I GGTNACC 1 cut(s) 2123
EcoRI GAATTC 3 cut(s) 170, 690, 2070
EcoT14I CCWWGG 2 cut(s) 514, 858
ErhI CCWWGG 2 cut(s) 514, 858
Esp3I CGTCTC 1 cut(s) 350
FaeI CATG 9 cut(s) 421, 456, 700, 1012, 1120, 1539, 1715, 2204, 2304
FaqI GGGAC 5 cut(s) 600, 777, 1388, 1684, 2148
FatI CATG 9 cut(s) 417, 452, 696, 1008, 1116, 1535, 1711, 2200, 2300
FbaI TGATCA 2 cut(s) 2173, 2197
Fnu4HI GCNGC 5 cut(s) 48, 836, 1359, 1796, 2083
FokI GGATG 3 cut(s) 877, 2095, 2334
Fsp4HI GCNGC 5 cut(s) 48, 836, 1359, 1796, 2083
FspBI CTAG 6 cut(s) 815, 950, 1193, 1389, 1643, 2354
GlaI GCGC 2 cut(s) 51, 1411
GluI GCNGC 5 cut(s) 48, 836, 1359, 1796, 2083
HaeII RGCGCY 1 cut(s) 1413
HaeIII GGCC 1 cut(s) 180
HapII CCGG 4 cut(s) 851, 1406, 2064, 2166
HgaI GACGC 2 cut(s) 843, 1717
HhaI GCGC 2 cut(s) 52, 1412
Hin1I GRCGYC 1 cut(s) 854
Hin1II CATG 9 cut(s) 421, 456, 700, 1012, 1120, 1539, 1715, 2204, 2304
Hin6I GCGC 2 cut(s) 50, 1410
HinP1I GCGC 2 cut(s) 50, 1410
HinfI GANTC 8 cut(s) 4, 13, 157, 235, 290, 760, 998, 1999
HpaII CCGG 4 cut(s) 851, 1406, 2064, 2166
HphI GGTGA 5 cut(s) 947, 1067, 1463, 1780, 1862
Hpy166II GTNNAC 1 cut(s) 955
Hpy188I TCNGA 9 cut(s) 295, 322, 1183, 1336, 1505, 1707, 2022, 2094, 2249
Hpy8I GTNNAC 1 cut(s) 955
Hpy99I CGWCG 4 cut(s) 76, 779, 1274, 2026
HpyCH4III ACNGT 3 cut(s) 1145, 1614, 2136
HpyCH4IV ACGT 3 cut(s) 1269, 2024, 2232
HpyF10VI GCNNNNNNNGC 1 cut(s) 1626
HpySE526I ACGT 3 cut(s) 1269, 2024, 2232
Hsp92I GRCGYC 1 cut(s) 854
Hsp92II CATG 9 cut(s) 421, 456, 700, 1012, 1120, 1539, 1715, 2204, 2304
HspAI GCGC 2 cut(s) 50, 1410
KpnI GGTACC 1 cut(s) 1109
KroI GCCGGC 1 cut(s) 850
KroNI GCCGGC 1 cut(s) 852
Ksp22I TGATCA 2 cut(s) 2173, 2197
Lsp1109I GCAGC 4 cut(s) 59, 822, 1345, 2094
LweI GCATC 4 cut(s) 34, 585, 855, 2320
MaeI CTAG 6 cut(s) 815, 950, 1193, 1389, 1643, 2354
MaeII ACGT 3 cut(s) 1269, 2024, 2232
MaeIII GTNAC 5 cut(s) 251, 258, 810, 2123, 2130
MboII GAAGA 8 cut(s) 266, 299, 342, 816, 1254, 1874, 2216, 2308
MfeI CAATTG 2 cut(s) 1913, 2358
MflI RGATCY 3 cut(s) 130, 1051, 2104
MhlI GDGCHC 1 cut(s) 1705
MlsI TGGCCA 1 cut(s) 180
MluNI TGGCCA 1 cut(s) 180
MlyI GAGTC 2 cut(s) 13, 299
MmeI TCCRAC 3 cut(s) 360, 1290, 2045
Mox20I TGGCCA 1 cut(s) 180
MroNI GCCGGC 1 cut(s) 850
MroXI GAANNNNTTC 3 cut(s) 468, 657, 2074
MscI TGGCCA 1 cut(s) 180
MseI TTAA 6 cut(s) 309, 414, 593, 681, 728, 2337
MslI CAYNNNNRTG 3 cut(s) 282, 584, 2205
Msp20I TGGCCA 1 cut(s) 180
MspI CCGG 4 cut(s) 851, 1406, 2064, 2166
MspR9I CCNGG 3 cut(s) 1406, 1407, 2166
MunI CAATTG 2 cut(s) 1913, 2358
Mva1269I GAATGC 1 cut(s) 1926
MwoI GCNNNNNNNGC 1 cut(s) 1626
NaeI GCCGGC 1 cut(s) 852
NciI CCSGG 3 cut(s) 1406, 1407, 2166
NgoMIV GCCGGC 1 cut(s) 850
NheI GCTAGC 1 cut(s) 2353
NlaIII CATG 9 cut(s) 421, 456, 700, 1012, 1120, 1539, 1715, 2204, 2304
NlaIV GGNNCC 7 cut(s) 616, 916, 1053, 1107, 1554, 2106, 2145
NmuCI GTSAC 3 cut(s) 258, 810, 2130
NspI RCATGY 1 cut(s) 421
PagI TCATGA 2 cut(s) 1008, 2200
PcsI WCGNNNNNNNCGW 2 cut(s) 974, 2253
PctI GAATGC 1 cut(s) 1926
PdiI GCCGGC 1 cut(s) 852
PdmI GAANNNNTTC 3 cut(s) 468, 657, 2074
PfeI GAWTC 6 cut(s) 13, 157, 235, 760, 998, 1999
PfoI TCCNGGA 1 cut(s) 2164
PinAI ACCGGT 1 cut(s) 2063
PkrI GCNGC 5 cut(s) 49, 837, 1360, 1797, 2084
PleI GAGTC 2 cut(s) 12, 298
PpsI GAGTC 2 cut(s) 12, 298
PshAI GACNNNNGTC 1 cut(s) 1579
PsiI TTATAA 2 cut(s) 1098, 2052
PspEI GGTNACC 1 cut(s) 2123
PspN4I GGNNCC 7 cut(s) 616, 916, 1053, 1107, 1554, 2106, 2145
PspPI GGNCC 5 cut(s) 382, 511, 614, 915, 1581
PsuI RGATCY 3 cut(s) 130, 1051, 2104
RsaI GTAC 5 cut(s) 68, 1107, 1159, 1216, 2349
RsaNI GTAC 5 cut(s) 67, 1106, 1158, 1215, 2348
RseI CAYNNNNRTG 3 cut(s) 282, 584, 2205
SaqAI TTAA 6 cut(s) 309, 414, 593, 681, 728, 2337
SatI GCNGC 5 cut(s) 48, 836, 1359, 1796, 2083
Sau96I GGNCC 5 cut(s) 382, 511, 614, 915, 1581
ScaI AGTACT 1 cut(s) 68
SchI GAGTC 2 cut(s) 13, 299
ScrFI CCNGG 3 cut(s) 1406, 1407, 2166
SduI GDGCHC 1 cut(s) 1705
SfaNI GCATC 4 cut(s) 34, 585, 855, 2320
SinI GGWCC 5 cut(s) 382, 511, 614, 915, 1581
SmaI CCCGGG 1 cut(s) 1407
SmiMI CAYNNNNRTG 3 cut(s) 282, 584, 2205
SmlI CTYRAG 2 cut(s) 632, 806
SmoI CTYRAG 2 cut(s) 632, 806
SpeI ACTAGT 1 cut(s) 1192
SsiI CCGC 2 cut(s) 1579, 1796
SspI AATATT 1 cut(s) 1277
SspMI CTAG 6 cut(s) 815, 950, 1193, 1389, 1643, 2354
StyD4I CCNGG 3 cut(s) 1404, 1405, 2164
StyI CCWWGG 2 cut(s) 514, 858
TaaI ACNGT 3 cut(s) 1145, 1614, 2136
TaiI ACGT 3 cut(s) 1272, 2027, 2235
TaqII GACCGA 1 cut(s) 25
TatI WGTACW 1 cut(s) 66
TauI GCSGC 1 cut(s) 1798
TfiI GAWTC 6 cut(s) 13, 157, 235, 760, 998, 1999
Tru1I TTAA 6 cut(s) 309, 414, 593, 681, 728, 2337
Tru9I TTAA 6 cut(s) 309, 414, 593, 681, 728, 2337
TscAI CASTG 9 cut(s) 289, 1250, 1310, 1525, 1563, 1729, 1770, 2139, 2370
TseFI GTSAC 3 cut(s) 258, 810, 2130
TseI GCWGC 4 cut(s) 47, 835, 1358, 2082
Tsp45I GTSAC 3 cut(s) 258, 810, 2130
TspGWI ACGGA 2 cut(s) 792, 2117
TspMI CCCGGG 1 cut(s) 1405
TspRI CASTG 9 cut(s) 289, 1250, 1310, 1525, 1563, 1729, 1770, 2139, 2370
VpaK11BI GGWCC 5 cut(s) 382, 511, 614, 915, 1581
XceI RCATGY 1 cut(s) 421
XcmI CCANNNNNNNNNTGG 1 cut(s) 552
XmaI CCCGGG 1 cut(s) 1405
XmnI GAANNNNTTC 3 cut(s) 468, 657, 2074
XspI CTAG 6 cut(s) 815, 950, 1193, 1389, 1643, 2354
ZrmI AGTACT 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.