Rroxscaffold_2G00077430

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
969950 .. 973468
3519 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00077430.1

Sequence Viewer

Length: 1479 bp
ATGGTCCTAATGTGGGTTGCATCGATATCGAGAGGAAAGCCCCTTCTGAAGCTTAGAGAGGGCCTCCCTGATCCTTCAGACCGGCTTTCGTCTTGGGTTGGAGTAGATTGCTGCAAATGGAGAGGTATAGGCTGCAACGAGACAACTGGACGTGTGGACAGCCTTAATCTTCGCAACCCTTATGTAGATGGTTTGGAGAGTGATGGTGGAACACTCCATGCTTTAGGAGGTGAGATCAATCCTTCTTTGCTTGTTTTGAAAGATCTGCTTTACTTGGATTTGAGCATGAATAACTTCGGAGGTCTAGAACTTCCAAGTTTCATTGGATCACTAGAAAAAACGACATACCTCAATCTATCTGGTGCATCTTTTGGTGGAGTAATTCCCGCCAATCTTGGAAACCTTTCAAAATTGCTTCATCTTGATCTCAGTAATAATGCTATTGAGAGTGATCTCAGATGGCTTCCCAGTCTTTCTTCCTTACAGTTTCTTCACTTGGGAGGAGCAGACCTTACCAAGGCTGCACCATATTGGCTTCCCACCGTTGTGGACTTTCCATCCTTCCTCCTACCCTTCCTCGTATCAATTTCACATCACTTTTGGTACGTTCTTGACCTCTCTTCCAATGGTTTCAACTCCACACTTACTCCCTGGTTGTTCAATCTAACTGAACTAGTCAATCTTGATCTAAGTTTGAACAATCTGAATGGAGAACTTCAAGAAACACTAGGGAGTTTGACTCATTTGAAGAACCTTGATTTGTCAGAGAACTCAGACATTGGAGGTCAGTTGCCGAGAAACTTGGGGATGCTATGCAATTTGCAGTCCCTTAAACTTTCAATCAACAAAGTTACTGGTGAGATAATTGAGTTCATTGATAGTATGTCTAGATGCACAAACAGCATCTTAGAGAGGTTGGATTTAGGTTTTAACAGTTTCACAGGAAATTTGCCTAATTCATTGGGACTTCTTAAGAAGTTAAGATTCCTCAAGTTGTGGCACAACTCATTTCAGGGTTCAATCCCAGAATCTATTTGTAACTTGACATCTTTGGAGGACTTTTACCTTGCACAGAATAAATTGAGTGGAGCCATCCCAGAAAGTTTTGGGCAGCTTTCATCACTCATTGCTGTAGATCTGTCTGAAAATACATGGGAAGGTGTTGAAGGAATGGATGGATTTCAAAACTTTTTAATTAGTGCGGAATTACTAGTCGTTGTGGTCCCGAATAATGTCGGGATTGAAGATACCATACCTGATTGGTTTTGGCAGTTGGATTTGGTATTAGATGAACTGGATGTTGCTTACAATCAATTAAGCGGCAAAGTGCCTAACTCGTTAAGGTTTAGCTATCCGGCTAATGCCGATTTGAGTTCAAACGGCTTTGAGGGCCCCTCCCACTCGATCACCAAACATTACAACACTCTACCTCGGGATGATCGGTTTCAGGACCAATTCCTTCAAACATTGGTGGTGTGA

Protein Analysis

492

Amino Acids

54.3

Weight (kDa)

4.65

Isoelectric Point (pI)

32.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 15 - 46 7.6e-09 Leucine rich repeat N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 387, 1202, 1320
AclWI GGATC 2 cut(s) 65, 334
AcsI RAATTY 1 cut(s) 946
AcuI CTGAAG 2 cut(s) 60, 68
AfaI GTAC 1 cut(s) 605
AfiI CCNNNNNNNGG 2 cut(s) 13, 517
AflII CTTAAG 1 cut(s) 971
AflIII ACRYGT 1 cut(s) 151
AhlI ACTAGT 2 cut(s) 673, 1210
AjiI CACGTC 1 cut(s) 152
AjnI CCWGG 1 cut(s) 650
AleI CACNNNNGTG 1 cut(s) 545
AluBI AGCT 3 cut(s) 52, 1114, 1350
AluI AGCT 3 cut(s) 52, 1114, 1350
Alw26I GTCTC 1 cut(s) 134
AlwI GGATC 2 cut(s) 65, 334
Ama87I CYCGRG 1 cut(s) 1431
AoxI GGCC 2 cut(s) 61, 1390
ApaI GGGCCC 1 cut(s) 1394
ApeKI GCWGC 4 cut(s) 111, 132, 521, 1111
ApoI RAATTY 1 cut(s) 946
Asp700I GAANNNNTTC 2 cut(s) 293, 403
AspS9I GGNCC 6 cut(s) 4, 61, 1222, 1390, 1391, 1450
AsuHPI GGTGA 3 cut(s) 242, 869, 1399
AvaI CYCGRG 1 cut(s) 1431
AvaII GGWCC 3 cut(s) 4, 1222, 1450
BaeGI GKGCMC 1 cut(s) 1394
BanII GRGCYC 1 cut(s) 1394
BarI GAAGNNNNNNTAC 2 cut(s) 1236, 1268
BbvI GCAGC 4 cut(s) 98, 119, 508, 1123
BccI CCATC 6 cut(s) 182, 197, 453, 565, 1100, 1169
BceAI ACGGC 1 cut(s) 1396
BcgI CGANNNNNNTGC 2 cut(s) 9, 43
BciT130I CCWGG 1 cut(s) 652
BcoDI GTCTC 1 cut(s) 134
BcuI ACTAGT 2 cut(s) 673, 1210
BfaI CTAG 6 cut(s) 305, 332, 674, 728, 888, 1211
BfmI CTRYAG 1 cut(s) 1131
BfrI CTTAAG 1 cut(s) 971
BglII AGATCT 2 cut(s) 262, 1135
BisI GCNGC 5 cut(s) 112, 133, 522, 1112, 1321
BlsI GCNGC 5 cut(s) 113, 134, 523, 1113, 1322
Bme1390I CCNGG 1 cut(s) 652
Bme18I GGWCC 3 cut(s) 4, 1222, 1450
BmeT110I CYCGRG 1 cut(s) 1431
BmgBI CACGTC 1 cut(s) 152
BmgT120I GGNCC 6 cut(s) 4, 61, 1222, 1390, 1391, 1450
BmiI GGNNCC 4 cut(s) 1090, 1224, 1392, 1393
BmrFI CCNGG 1 cut(s) 652
BmrI ACTGGG 1 cut(s) 462
BmsI GCATC 5 cut(s) 29, 374, 798, 881, 912
BmuI ACTGGG 1 cut(s) 462
BplI GAGNNNNNCTC 6 cut(s) 48, 80, 724, 756, 1379, 1411
BpuEI CTTGAG 1 cut(s) 974
Bsa29I ATCGAT 1 cut(s) 23
BsaJI CCNNGG 3 cut(s) 516, 650, 1430
BsaXI ACNNNNNCTCC 2 cut(s) 631, 661
Bsc4I CCNNNNNNNGG 2 cut(s) 13, 517
Bse118I RCCGGY 1 cut(s) 81
Bse1I ACTGG 4 cut(s) 151, 468, 859, 1299
Bse3DI GCAATG 1 cut(s) 1125
BseBI CCWGG 1 cut(s) 652
BseCI ATCGAT 1 cut(s) 23
BseDI CCNNGG 3 cut(s) 516, 650, 1430
BseGI GGATG 6 cut(s) 557, 813, 1092, 1180, 1303, 1441
BseLI CCNNNNNNNGG 2 cut(s) 13, 517
BseMI GCAATG 1 cut(s) 1125
BseMII CTCAG 3 cut(s) 442, 469, 786
BseNI ACTGG 4 cut(s) 151, 468, 859, 1299
BseRI GAGGAG 1 cut(s) 516
BseSI GKGCMC 1 cut(s) 1394
BseXI GCAGC 4 cut(s) 98, 119, 508, 1123
BsgI GTGCAG 1 cut(s) 507
BshFI GGCC 2 cut(s) 63, 1392
BshVI ATCGAT 1 cut(s) 23
BsiHKCI CYCGRG 1 cut(s) 1431
BsiSI CCGG 2 cut(s) 82, 1355
BslFI GGGAC 3 cut(s) 811, 978, 1208
BslI CCNNNNNNNGG 2 cut(s) 13, 517
BsmAI GTCTC 1 cut(s) 134
BsmFI GGGAC 3 cut(s) 811, 978, 1208
BsnI GGCC 2 cut(s) 63, 1392
BsoBI CYCGRG 1 cut(s) 1431
Bsp120I GGGCCC 1 cut(s) 1390
Bsp1286I GDGCHC 1 cut(s) 1394
BspACI CCGC 3 cut(s) 387, 1202, 1320
BspANI GGCC 2 cut(s) 63, 1392
BspCNI CTCAG 3 cut(s) 441, 468, 785
BspDI ATCGAT 1 cut(s) 23
BspLI GGNNCC 4 cut(s) 1090, 1224, 1392, 1393
BspPI GGATC 2 cut(s) 65, 334
BspTI CTTAAG 1 cut(s) 971
BsrDI GCAATG 1 cut(s) 1125
BsrFI RCCGGY 1 cut(s) 81
BsrI ACTGG 4 cut(s) 151, 468, 859, 1299
BssAI RCCGGY 1 cut(s) 81
BssECI CCNNGG 3 cut(s) 516, 650, 1430
BssT1I CCWWGG 1 cut(s) 516
Bst2UI CCWGG 1 cut(s) 652
Bst4CI ACNGT 3 cut(s) 486, 544, 935
Bst6I CTCTTC 1 cut(s) 625
BstAFI CTTAAG 1 cut(s) 971
BstDEI CTNAG 6 cut(s) 53, 428, 455, 689, 772, 907
BstENI CCTNNNNNAGG 1 cut(s) 515
BstF5I GGATG 6 cut(s) 557, 813, 1092, 1180, 1303, 1441
BstMAI GTCTC 1 cut(s) 134
BstMWI GCNNNNNNNGC 2 cut(s) 900, 1389
BstNI CCWGG 1 cut(s) 652
BstSCI CCNGG 1 cut(s) 650
BstSFI CTRYAG 1 cut(s) 1131
BstSLI GKGCMC 1 cut(s) 1394
BstV1I GCAGC 4 cut(s) 98, 119, 508, 1123
BstX2I RGATCY 2 cut(s) 262, 1135
BstXI CCANNNNNNTGG 1 cut(s) 547
BstYI RGATCY 2 cut(s) 262, 1135
Bsu15I ATCGAT 1 cut(s) 23
BsuRI GGCC 2 cut(s) 63, 1392
BsuTUI ATCGAT 1 cut(s) 23
BtrI CACGTC 1 cut(s) 152
BtsCI GGATG 6 cut(s) 557, 813, 1092, 1180, 1303, 1441
Cfr10I RCCGGY 1 cut(s) 81
Cfr13I GGNCC 6 cut(s) 4, 61, 1222, 1390, 1391, 1450
ClaI ATCGAT 1 cut(s) 23
Csp6I GTAC 1 cut(s) 604
CviAII CATG 3 cut(s) 218, 286, 1152
CviQI GTAC 1 cut(s) 604
DdeI CTNAG 6 cut(s) 53, 428, 455, 689, 772, 907
Eam1104I CTCTTC 1 cut(s) 625
EarI CTCTTC 1 cut(s) 625
Eco130I CCWWGG 1 cut(s) 516
Eco24I GRGCYC 1 cut(s) 1394
Eco32I GATATC 1 cut(s) 27
Eco47I GGWCC 3 cut(s) 4, 1222, 1450
Eco57I CTGAAG 2 cut(s) 60, 68
Eco88I CYCGRG 1 cut(s) 1431
EcoNI CCTNNNNNAGG 1 cut(s) 515
EcoO109I RGGNCCY 3 cut(s) 61, 1390, 1391
EcoRII CCWGG 1 cut(s) 650
EcoRV GATATC 1 cut(s) 27
EcoT14I CCWWGG 1 cut(s) 516
EcoT38I GRGCYC 1 cut(s) 1394
ErhI CCWWGG 1 cut(s) 516
FaeI CATG 3 cut(s) 221, 289, 1155
FalI AAGNNNNNCTT 2 cut(s) 252, 284
FaqI GGGAC 3 cut(s) 811, 978, 1208
FatI CATG 3 cut(s) 217, 285, 1151
FauI CCCGC 1 cut(s) 394
Fnu4HI GCNGC 5 cut(s) 112, 133, 522, 1112, 1321
FokI GGATG 6 cut(s) 544, 820, 1079, 1187, 1310, 1448
FriOI GRGCYC 1 cut(s) 1394
Fsp4HI GCNGC 5 cut(s) 112, 133, 522, 1112, 1321
FspBI CTAG 6 cut(s) 305, 332, 674, 728, 888, 1211
GluI GCNGC 5 cut(s) 112, 133, 522, 1112, 1321
HaeIII GGCC 2 cut(s) 63, 1392
HapII CCGG 2 cut(s) 82, 1355
Hin1II CATG 3 cut(s) 221, 289, 1155
HindIII AAGCTT 1 cut(s) 50
HinfI GANTC 3 cut(s) 739, 984, 1028
HpaII CCGG 2 cut(s) 82, 1355
HphI GGTGA 3 cut(s) 242, 869, 1399
Hpy166II GTNNAC 2 cut(s) 157, 550
Hpy188I TCNGA 8 cut(s) 48, 79, 299, 458, 705, 766, 775, 1144
Hpy8I GTNNAC 2 cut(s) 157, 550
HpyAV CCTTC 8 cut(s) 53, 84, 252, 571, 583, 1151, 1160, 1469
HpyCH4III ACNGT 3 cut(s) 486, 544, 935
HpyCH4IV ACGT 2 cut(s) 151, 606
HpyCH4V TGCA 9 cut(s) 20, 114, 135, 365, 524, 816, 823, 894, 1070
HpyF10VI GCNNNNNNNGC 2 cut(s) 900, 1389
HpyF3I CTNAG 6 cut(s) 53, 428, 455, 689, 772, 907
HpySE526I ACGT 2 cut(s) 151, 606
Hsp92II CATG 3 cut(s) 221, 289, 1155
LmnI GCTCC 2 cut(s) 503, 1088
Lsp1109I GCAGC 4 cut(s) 98, 119, 508, 1123
LweI GCATC 5 cut(s) 29, 374, 798, 881, 912
MaeI CTAG 6 cut(s) 305, 332, 674, 728, 888, 1211
MaeII ACGT 2 cut(s) 151, 606
MaeIII GTNAC 2 cut(s) 850, 1037
MboII GAAGA 6 cut(s) 161, 468, 482, 612, 760, 1256
MflI RGATCY 2 cut(s) 262, 1135
MhlI GDGCHC 1 cut(s) 1394
MlyI GAGTC 1 cut(s) 733
MmeI TCCRAC 3 cut(s) 79, 897, 1254
MroXI GAANNNNTTC 2 cut(s) 293, 403
MseI TTAA 8 cut(s) 165, 831, 930, 972, 980, 1193, 1316, 1340
MslI CAYNNNNRTG 1 cut(s) 545
MspCI CTTAAG 1 cut(s) 971
MspI CCGG 2 cut(s) 82, 1355
MspR9I CCNGG 1 cut(s) 652
MvaI CCWGG 1 cut(s) 652
MwoI GCNNNNNNNGC 2 cut(s) 900, 1389
NlaIII CATG 3 cut(s) 221, 289, 1155
NlaIV GGNNCC 4 cut(s) 1090, 1224, 1392, 1393
NmeAIII GCCGAG 1 cut(s) 819
OliI CACNNNNGTG 1 cut(s) 545
PdmI GAANNNNTTC 2 cut(s) 293, 403
PfeI GAWTC 2 cut(s) 984, 1028
PkrI GCNGC 5 cut(s) 113, 134, 523, 1113, 1322
PleI GAGTC 1 cut(s) 733
PpsI GAGTC 1 cut(s) 733
Psp6I CCWGG 1 cut(s) 650
PspGI CCWGG 1 cut(s) 650
PspN4I GGNNCC 4 cut(s) 1090, 1224, 1392, 1393
PspOMI GGGCCC 1 cut(s) 1390
PspPI GGNCC 6 cut(s) 4, 61, 1222, 1390, 1391, 1450
PsuI RGATCY 2 cut(s) 262, 1135
RsaI GTAC 1 cut(s) 605
RsaNI GTAC 1 cut(s) 604
RseI CAYNNNNRTG 1 cut(s) 545
SaqAI TTAA 8 cut(s) 165, 831, 930, 972, 980, 1193, 1316, 1340
SatI GCNGC 5 cut(s) 112, 133, 522, 1112, 1321
Sau96I GGNCC 6 cut(s) 4, 61, 1222, 1390, 1391, 1450
SchI GAGTC 1 cut(s) 733
ScrFI CCNGG 1 cut(s) 652
SduI GDGCHC 1 cut(s) 1394
SfaNI GCATC 5 cut(s) 29, 374, 798, 881, 912
SfcI CTRYAG 1 cut(s) 1131
SinI GGWCC 3 cut(s) 4, 1222, 1450
SmiMI CAYNNNNRTG 1 cut(s) 545
SmlI CTYRAG 2 cut(s) 971, 989
SmoI CTYRAG 2 cut(s) 971, 989
SpeI ACTAGT 2 cut(s) 673, 1210
SsiI CCGC 3 cut(s) 387, 1202, 1320
SspMI CTAG 6 cut(s) 305, 332, 674, 728, 888, 1211
StyD4I CCNGG 1 cut(s) 650
StyI CCWWGG 1 cut(s) 516
TaaI ACNGT 3 cut(s) 486, 544, 935
TaiI ACGT 2 cut(s) 154, 609
TaqI TCGA 3 cut(s) 23, 29, 1403
TauI GCSGC 1 cut(s) 1323
TfiI GAWTC 2 cut(s) 984, 1028
Tru1I TTAA 8 cut(s) 165, 831, 930, 972, 980, 1193, 1316, 1340
Tru9I TTAA 8 cut(s) 165, 831, 930, 972, 980, 1193, 1316, 1340
TseI GCWGC 4 cut(s) 111, 132, 521, 1111
TspDTI ATGAA 7 cut(s) 302, 310, 407, 862, 948, 1107, 1305
Vha464I CTTAAG 1 cut(s) 971
VpaK11BI GGWCC 3 cut(s) 4, 1222, 1450
XagI CCTNNNNNAGG 1 cut(s) 515
XapI RAATTY 1 cut(s) 946
XbaI TCTAGA 2 cut(s) 304, 887
XmnI GAANNNNTTC 2 cut(s) 293, 403
XspI CTAG 6 cut(s) 305, 332, 674, 728, 888, 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.