MD10G1222200.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
32055480 .. 32058164
2685 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1222200.v1.1.491

Sequence Viewer

Length: 2685 bp
ATGGGTAGGTTCCATGCTTGCTTATTCAACCCTACTTTTCACCTCAACATTTTGCTCTTTCTAGTTTTGGCCTCTTCATATCTTTCACTCACTTCAAAATCATGCATCGAGGAAGAGAGAGGAGCACTTCTCAGCTTTAAACAACACCTCACCGATCAGTCCGGTCGGCTATCTTCTTGGGTTGGTCACGATTGCTGTCAATGGGAAGGGATTTCGTGCGACAACCGCACTGGTCATGCTACAAAAATTGACCTCCGTAATACTTATCCAGATCAGTTTAGAAGTTATGAAGAGTGGGAGAAGAAGTATAAAAGGTCTCAGTTGGCAGGTAAGGTAACTTCATCCTTGCTTACCTTGAAACATTTGAGCTACCTAGACCTAAGTTTGAATAATTTCCAAGGGATTCACATTGTTTGCCAACTTCCAACTTTGAGATATCTCAACATCTCCTCTGCATCATCTGGGGGTGAATCTGAATTTCCCAAAAGCATTTTCAACCTTACTAACCTCCAAACACTTGACCTAAGTGAAAATTCTTTCACCGGTCATTTTCCTCCCCAACTTGCAAGCCTCGAATCTCTTAAACACCTTGATTTATCTTCTAATCATCTCAAAGGTAGAATTCCCAAACTCCTTGGAAACTTTTGCAATCTAAAGACCTTAAACCTCGCTTTCAACAAATTTGATGGGGGGTTTCAAGAGCTTTTGAGTGGTTTCTCAAATTGCACAAATAACATATTAGAGTCACTAGATTTGTCTTTCAATCAGTTTGCAACAGAATTGTCCGACTCCTTAAGAGTTCCAACAAACTTGCAGCACCTTCACCTCGGAGGCAACTTGTTTTGGGGCTCGTTTCCAACTTCTGTTGGAAACTTGTCATCCTTGAAAAGTCTAAACCTTCGGGACAACAACATGAACGGATCTATTCCCGAAAGTTTGGGCCAACTCTCTGAGCTAGTTCACCTGGCTTTGTATGGGAATTCATGGGAAGGCATTTTAACAGAAACTCATTTCATAAATCTCACAAGACTGCAATATCTTTCTCTGTCCACGGATGGAGCTATGCCGCTCATTTTCAATGTGAGTTATGAGTGGATTCCCCCCTTCCAGCTCCACACAATTGACATTACAAATTGTAGTGTAGGTCCTGCATTTCCTGTATGGCTTCAATCTCAAACTGAGCTACTTGATGTCACCCTTCGTCGTACCAGAATCTCAGATTCTATACCAGAGGAATGGTTCTTCAACTTATCTTCCAAAGTTGCAAGTTTGGATTTATCGCGCAACCAAATCCGCGGAAAGCTTCAATCCCAACTCAAATTTCCAAATTTAGAGTATATGGATTTGAGTCATAATCAATTTGAAGGTCCACTTCCACATTTATCTTCTGATGCCACTTTTCTTTATCTCAAAAATAATAGTTTTTCCGGGCCTATTCCTTCAAATTTCGGACAACTGATGCCCAAATTAGGAGAGATGAATCTTGCGGAGAATCACTTGAATGGTACAATTCCATCCTCTCTATGCGACATGCAGAACTTGAGAATCCTGTCCCTAAGGAGCAATCAGTTTTACGGAGAATTCCCAAAAACATGGAGTGTGTGGCATGATATATGGGTTGTTGATGTGGCAGACAATAACCTATCTGGTAATATTCCGAGTTCAATGGGTGTCCCGAGTTCTCTATATATATTGAAGATGAACAACAACAATTTTGATGGCGAAATTCCTATCGAGTTGAAAAATGCAACTTCTTTGCTCAGTATTGATCTTGGGGGCAACAAATTAACCGGAAGTGTTCCTTTATGGATCGGATCAGACTACTCCAAGTTGAATACGCTGCGTTTGCACTCCAACTTTTTAAGTGGACATATCCCGCGCCATCTTTGCAATCTTCCCTGCCTTCACATCCTAGACCTTGGCCATAACAATCTTTCAGGGACTATTCCCAAGTGTTTGAAGAATTTGACTGCTTTGACTTTCTCTCCATCCGATAATTATTCAGACCCTATATATTATGAGATCCAAACAACAGTCACGGCGAAAGGAAGCGAACTCGTTTATTACATCACTGCTTTGAAATGGGTTTATAGCATTGATCTTTCATCAAATAATTTAGAAGGAGAAATTCCTAAAGAAATGACCAGCCTCATTGCATTGGGAACATTGAACTTGTCAAGAAATCAGTTAAGGGGGAACATTCCCTCAACGATTGGAAATTTGCGTTGGTTGGAAACTCTTGATCTCTCACACAATCGTCTTTCGGGACAAATTCCTCAGAGTTACTCATCTTTATCGCTCTTGGCTCATGTGAACTTGTCTTTCAACAACTTGGTTGGAAGAATTCCTTCGGGCAACCAACTCCAGACGCTTGAGGACTCTTCCATTTATGAAGGCAATCCATTACTCTGTGGGGTTCCTCTTTCAACTAAGTGCCCGGGAGATGAAACACCGTCTTTTCCCTCTAGTGATGCCGGAGATAATAAAGATGAAGACAATAATGGAAAGCTTTGGCTCTATGTCAGTATCACACTCGGCTTTATCACAGGCTTTTGGGGAGTTTGTGGCACATTAATCGTAAAGAAGTCATGGAGGTATGCGTATTTTCGTTTCTTTGATGATATGAAAGACAAAGTAGCATTAGCAGTTGTATTGAAAGTGGCTCGGTTGCAAAGAAAAATTTGA

Protein Analysis

895

Amino Acids

99.97

Weight (kDa)

6.23

Isoelectric Point (pI)

40.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 74 1.6e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 112 - 224 1.9e-11 Leucine-rich repeat region
LRR_8 PF13855 162 - 204 2.1e-07 Leucine rich repeat
LRR_14 PF23598 246 - 395 2e-10 Leucine-rich repeat region
LRR_8 PF13855 269 - 327 1e-06 Leucine rich repeat
LRR_8 PF13855 398 - 454 7e-06 Leucine rich repeat
LRR_14 PF23598 705 - 792 5.5e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000048)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G34930
fragaria_vesca FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 317
AccBSI CCGCTC 1 cut(s) 1069
AccII CGCG 3 cut(s) 1282, 1296, 1879
AciI CCGC 6 cut(s) 226, 1067, 1294, 1296, 1487, 1877
AclWI GGATC 4 cut(s) 928, 1817, 1822, 2017
AcoI YGGCCR 1 cut(s) 1921
AfaI GTAC 2 cut(s) 1207, 1507
AfiI CCNNNNNNNGG 1 cut(s) 1469
AflII CTTAAG 1 cut(s) 793
AgeI ACCGGT 1 cut(s) 542
AjnI CCWGG 1 cut(s) 963
AjuI GAANNNNNNNTTGG 6 cut(s) 476, 508, 1305, 1337, 2209, 2241
AluBI AGCT 9 cut(s) 135, 369, 703, 955, 1061, 1111, 1183, 1303, 2509
AluI AGCT 9 cut(s) 135, 369, 703, 955, 1061, 1111, 1183, 1303, 2509
Alw21I GWGCWC 1 cut(s) 127
Alw26I GTCTC 1 cut(s) 321
AlwI GGATC 4 cut(s) 928, 1817, 1822, 2017
Ama87I CYCGRG 2 cut(s) 1675, 2437
AoxI GGCC 4 cut(s) 69, 940, 1430, 1921
ApeKI GCWGC 2 cut(s) 814, 1840
AseI ATTAAT 1 cut(s) 2573
AsiGI ACCGGT 1 cut(s) 542
Asp700I GAANNNNTTC 2 cut(s) 392, 2347
AspLEI GCGC 2 cut(s) 1284, 1881
AspS9I GGNCC 4 cut(s) 940, 1145, 1367, 1430
AsuC2I CCSGG 3 cut(s) 1429, 2438, 2439
AsuHPI GGTGA 7 cut(s) 32, 142, 479, 532, 815, 953, 1186
AvaI CYCGRG 2 cut(s) 1675, 2437
AvaII GGWCC 2 cut(s) 1145, 1367
AxyI CCTNAGG 1 cut(s) 1556
BaeGI GKGCMC 1 cut(s) 2438
BalI TGGCCA 1 cut(s) 1923
BanII GRGCYC 1 cut(s) 851
BarI GAAGNNNNNNTAC 2 cut(s) 322, 354
BbsI GAAGAC 1 cut(s) 2499
Bbv12I GWGCWC 1 cut(s) 127
BbvI GCAGC 2 cut(s) 826, 1827
BccI CCATC 6 cut(s) 680, 1049, 1522, 1712, 1890, 1996
BceAI ACGGC 1 cut(s) 2055
BcgI CGANNNNNNTGC 2 cut(s) 2557, 2591
BciT130I CCWGG 1 cut(s) 965
BcnI CCSGG 3 cut(s) 1429, 2438, 2439
BcoDI GTCTC 1 cut(s) 321
BfaI CTAG 6 cut(s) 62, 374, 749, 956, 1913, 2466
BfrI CTTAAG 1 cut(s) 793
BfuAI ACCTGC 1 cut(s) 317
BisI GCNGC 3 cut(s) 815, 1067, 1841
BlsI GCNGC 3 cut(s) 816, 1068, 1842
Bme1390I CCNGG 4 cut(s) 965, 1429, 2438, 2439
Bme18I GGWCC 2 cut(s) 1145, 1367
BmeT110I CYCGRG 2 cut(s) 1675, 2437
BmgT120I GGNCC 4 cut(s) 940, 1145, 1367, 1430
BmiI GGNNCC 2 cut(s) 11, 2418
BmrFI CCNGG 4 cut(s) 965, 1429, 2438, 2439
BmsI GCATC 5 cut(s) 114, 464, 1381, 1449, 2461
BpiI GAAGAC 1 cut(s) 2499
BplI GAGNNNNNCTC 2 cut(s) 114, 146
BpmI CTGGAG 1 cut(s) 2348
BpuEI CTTGAG 2 cut(s) 1561, 2393
BpuMI CCSGG 3 cut(s) 1429, 2438, 2439
BsaI GGTCTC 1 cut(s) 321
BsaJI CCNNGG 7 cut(s) 397, 634, 826, 1050, 1294, 1918, 2437
BsaWI WCCGGW 3 cut(s) 161, 542, 1790
BsaXI ACNNNNNCTCC 4 cut(s) 290, 320, 1969, 1999
Bsc4I CCNNNNNNNGG 1 cut(s) 1469
Bse118I RCCGGY 1 cut(s) 542
Bse1I ACTGG 1 cut(s) 235
Bse21I CCTNAGG 1 cut(s) 1556
Bse3DI GCAATG 1 cut(s) 2151
BseBI CCWGG 1 cut(s) 965
BseDI CCNNGG 7 cut(s) 397, 634, 826, 1050, 1294, 1918, 2437
BseGI GGATG 6 cut(s) 341, 878, 1060, 1514, 1908, 1988
BseLI CCNNNNNNNGG 1 cut(s) 1469
BseMI GCAATG 1 cut(s) 2151
BseMII CTCAG 7 cut(s) 145, 332, 942, 1170, 1230, 1774, 2291
BseNI ACTGG 1 cut(s) 235
BseRI GAGGAG 2 cut(s) 135, 439
BseSI GKGCMC 1 cut(s) 2438
BseXI GCAGC 2 cut(s) 826, 1827
Bsh1236I CGCG 3 cut(s) 1282, 1296, 1879
Bsh1285I CGRYCG 1 cut(s) 166
BshFI GGCC 4 cut(s) 71, 942, 1432, 1923
BshTI ACCGGT 1 cut(s) 542
BsiEI CGRYCG 1 cut(s) 166
BsiHKAI GWGCWC 1 cut(s) 127
BsiHKCI CYCGRG 2 cut(s) 1675, 2437
BsiSI CCGG 6 cut(s) 162, 543, 1428, 1791, 2438, 2475
BslFI GGGAC 5 cut(s) 917, 1537, 1658, 1954, 2280
BslI CCNNNNNNNGG 1 cut(s) 1469
BsmAI GTCTC 1 cut(s) 321
BsmFI GGGAC 5 cut(s) 917, 1537, 1658, 1954, 2280
BsnI GGCC 4 cut(s) 71, 942, 1432, 1923
Bso31I GGTCTC 1 cut(s) 321
BsoBI CYCGRG 2 cut(s) 1675, 2437
Bsp1286I GDGCHC 3 cut(s) 127, 851, 2438
Bsp143I GATC 9 cut(s) 154, 271, 920, 1768, 1809, 1814, 2022, 2098, 2242
BspACI CCGC 6 cut(s) 226, 1067, 1294, 1296, 1487, 1877
BspANI GGCC 4 cut(s) 71, 942, 1432, 1923
BspCNI CTCAG 7 cut(s) 144, 331, 943, 1171, 1229, 1773, 2290
BspFNI CGCG 3 cut(s) 1282, 1296, 1879
BspLI GGNNCC 2 cut(s) 11, 2418
BspMI ACCTGC 1 cut(s) 317
BspPI GGATC 4 cut(s) 928, 1817, 1822, 2017
BspTI CTTAAG 1 cut(s) 793
BspTNI GGTCTC 1 cut(s) 321
BsrBI CCGCTC 1 cut(s) 1069
BsrDI GCAATG 1 cut(s) 2151
BsrFI RCCGGY 1 cut(s) 542
BsrI ACTGG 1 cut(s) 235
BssAI RCCGGY 1 cut(s) 542
BssECI CCNNGG 7 cut(s) 397, 634, 826, 1050, 1294, 1918, 2437
BssMI GATC 9 cut(s) 154, 271, 920, 1768, 1809, 1814, 2022, 2098, 2242
BssT1I CCWWGG 3 cut(s) 397, 634, 1918
Bst2UI CCWGG 1 cut(s) 965
Bst4CI ACNGT 2 cut(s) 2035, 2454
Bst6I CTCTTC 4 cut(s) 79, 108, 285, 2386
BstAFI CTTAAG 1 cut(s) 793
BstC8I GCNNGC 2 cut(s) 19, 568
BstDSI CCRYGG 2 cut(s) 1050, 1294
BstF5I GGATG 6 cut(s) 341, 878, 1060, 1514, 1908, 1988
BstFNI CGCG 3 cut(s) 1282, 1296, 1879
BstHHI GCGC 2 cut(s) 1284, 1881
BstKTI GATC 9 cut(s) 157, 274, 923, 1771, 1812, 1817, 2025, 2101, 2245
BstMAI GTCTC 1 cut(s) 321
BstMBI GATC 9 cut(s) 154, 271, 920, 1768, 1809, 1814, 2022, 2098, 2242
BstMCI CGRYCG 1 cut(s) 166
BstMWI GCNNNNNNNGC 3 cut(s) 225, 1846, 1887
BstNI CCWGG 1 cut(s) 965
BstNSI RCATGY 1 cut(s) 1534
BstSCI CCNGG 4 cut(s) 963, 1427, 2436, 2437
BstSLI GKGCMC 1 cut(s) 2438
BstUI CGCG 3 cut(s) 1282, 1296, 1879
BstV1I GCAGC 2 cut(s) 826, 1827
BstV2I GAAGAC 1 cut(s) 2499
BstX2I RGATCY 2 cut(s) 920, 2022
BstXI CCANNNNNNTGG 2 cut(s) 1236, 1593
BstYI RGATCY 2 cut(s) 920, 2022
Bsu36I CCTNAGG 1 cut(s) 1556
BsuRI GGCC 4 cut(s) 71, 942, 1432, 1923
BtgI CCRYGG 2 cut(s) 1050, 1294
BtsCI GGATG 6 cut(s) 341, 878, 1060, 1514, 1908, 1988
BtsI GCAGTG 1 cut(s) 2070
BtsIMutI CAGTG 2 cut(s) 228, 2070
BveI ACCTGC 1 cut(s) 317
Cac8I GCNNGC 2 cut(s) 19, 568
CfoI GCGC 2 cut(s) 1284, 1881
Cfr10I RCCGGY 1 cut(s) 542
Cfr13I GGNCC 4 cut(s) 940, 1145, 1367, 1430
Cfr42I CCGCGG 1 cut(s) 1297
Cfr9I CCCGGG 1 cut(s) 2437
CseI GACGC 1 cut(s) 2377
Csp6I GTAC 2 cut(s) 1206, 1506
CspAI ACCGGT 1 cut(s) 542
CviQI GTAC 2 cut(s) 1206, 1506
DpnI GATC 9 cut(s) 156, 273, 922, 1770, 1811, 1816, 2024, 2100, 2244
DpnII GATC 9 cut(s) 154, 271, 920, 1768, 1809, 1814, 2022, 2098, 2242
DraI TTTAAA 1 cut(s) 139
EaeI YGGCCR 1 cut(s) 1921
Eam1104I CTCTTC 4 cut(s) 79, 108, 285, 2386
EarI CTCTTC 4 cut(s) 79, 108, 285, 2386
Eco130I CCWWGG 3 cut(s) 397, 634, 1918
Eco24I GRGCYC 1 cut(s) 851
Eco31I GGTCTC 1 cut(s) 321
Eco32I GATATC 1 cut(s) 437
Eco47I GGWCC 2 cut(s) 1145, 1367
Eco81I CCTNAGG 1 cut(s) 1556
Eco88I CYCGRG 2 cut(s) 1675, 2437
EcoO109I RGGNCCY 1 cut(s) 1145
EcoRI GAATTC 4 cut(s) 621, 979, 1580, 2343
EcoRII CCWGG 1 cut(s) 963
EcoRV GATATC 1 cut(s) 437
EcoT14I CCWWGG 3 cut(s) 397, 634, 1918
EcoT22I ATGCAT 1 cut(s) 107
EcoT38I GRGCYC 1 cut(s) 851
ErhI CCWWGG 3 cut(s) 397, 634, 1918
FalI AAGNNNNNCTT 6 cut(s) 1356, 1388, 1786, 1818, 2332, 2364
FaqI GGGAC 5 cut(s) 917, 1537, 1658, 1954, 2280
FauI CCCGC 1 cut(s) 1884
Fnu4HI GCNGC 3 cut(s) 815, 1067, 1841
FokI GGATG 6 cut(s) 328, 865, 1067, 1501, 1895, 1975
FriOI GRGCYC 1 cut(s) 851
Fsp4HI GCNGC 3 cut(s) 815, 1067, 1841
FspBI CTAG 6 cut(s) 62, 374, 749, 956, 1913, 2466
GlaI GCGC 2 cut(s) 1283, 1880
GluI GCNGC 3 cut(s) 815, 1067, 1841
GsuI CTGGAG 1 cut(s) 2348
HaeIII GGCC 4 cut(s) 71, 942, 1432, 1923
HapII CCGG 6 cut(s) 162, 543, 1428, 1791, 2438, 2475
HgaI GACGC 1 cut(s) 2377
HhaI GCGC 2 cut(s) 1284, 1881
Hin6I GCGC 2 cut(s) 1282, 1879
HinP1I GCGC 2 cut(s) 1282, 1879
HindIII AAGCTT 2 cut(s) 1301, 2507
HpaII CCGG 6 cut(s) 162, 543, 1428, 1791, 2438, 2475
HphI GGTGA 7 cut(s) 32, 142, 479, 532, 815, 953, 1186
Hpy166II GTNNAC 5 cut(s) 961, 1050, 1370, 1868, 2314
Hpy8I GTNNAC 5 cut(s) 961, 1050, 1370, 1868, 2314
Hpy99I CGWCG 1 cut(s) 1206
HpyCH4III ACNGT 2 cut(s) 2035, 2454
HpyF10VI GCNNNNNNNGC 3 cut(s) 225, 1846, 1887
HspAI GCGC 2 cut(s) 1282, 1879
KspI CCGCGG 1 cut(s) 1297
Kzo9I GATC 9 cut(s) 154, 271, 920, 1768, 1809, 1814, 2022, 2098, 2242
LmnI GCTCC 4 cut(s) 122, 1058, 1116, 1560
Lsp1109I GCAGC 2 cut(s) 826, 1827
LweI GCATC 5 cut(s) 114, 464, 1381, 1449, 2461
MaeI CTAG 6 cut(s) 62, 374, 749, 956, 1913, 2466
MaeIII GTNAC 6 cut(s) 185, 334, 744, 1192, 2035, 2282
MalI GATC 9 cut(s) 156, 273, 922, 1770, 1811, 1816, 2024, 2100, 2244
MbiI CCGCTC 1 cut(s) 1069
MboI GATC 9 cut(s) 154, 271, 920, 1768, 1809, 1814, 2022, 2098, 2242
MfeI CAATTG 1 cut(s) 1119
MflI RGATCY 2 cut(s) 920, 2022
MhlI GDGCHC 3 cut(s) 127, 851, 2438
MlsI TGGCCA 1 cut(s) 1923
MluNI TGGCCA 1 cut(s) 1923
MlyI GAGTC 4 cut(s) 752, 782, 1357, 2372
MmeI TCCRAC 8 cut(s) 449, 810, 827, 847, 881, 1878, 2211, 2317
Mox20I TGGCCA 1 cut(s) 1923
Mph1103I ATGCAT 1 cut(s) 107
MroXI GAANNNNTTC 2 cut(s) 392, 2347
MscI TGGCCA 1 cut(s) 1923
MseI TTAA 9 cut(s) 138, 582, 662, 794, 998, 1787, 1862, 2189, 2573
MslI CAYNNNNRTG 1 cut(s) 1500
Msp20I TGGCCA 1 cut(s) 1923
MspA1I CMGCKG 1 cut(s) 1296
MspCI CTTAAG 1 cut(s) 793
MspI CCGG 6 cut(s) 162, 543, 1428, 1791, 2438, 2475
MspR9I CCNGG 4 cut(s) 965, 1429, 2438, 2439
MunI CAATTG 1 cut(s) 1119
MvaI CCWGG 1 cut(s) 965
MvnI CGCG 3 cut(s) 1282, 1296, 1879
MwoI GCNNNNNNNGC 3 cut(s) 225, 1846, 1887
NciI CCSGG 3 cut(s) 1429, 2438, 2439
NdeII GATC 9 cut(s) 154, 271, 920, 1768, 1809, 1814, 2022, 2098, 2242
NlaIV GGNNCC 2 cut(s) 11, 2418
NmeAIII GCCGAG 1 cut(s) 2514
NmuCI GTSAC 4 cut(s) 185, 744, 1192, 2035
NsiI ATGCAT 1 cut(s) 107
NspI RCATGY 1 cut(s) 1534
PdmI GAANNNNTTC 2 cut(s) 392, 2347
PfeI GAWTC 9 cut(s) 403, 470, 575, 1096, 1212, 1220, 1480, 1492, 1545
PinAI ACCGGT 1 cut(s) 542
PkrI GCNGC 3 cut(s) 816, 1068, 1842
PleI GAGTC 4 cut(s) 751, 782, 1356, 2372
PpsI GAGTC 4 cut(s) 751, 782, 1356, 2372
PpuMI RGGWCCY 1 cut(s) 1145
PshBI ATTAAT 1 cut(s) 2573
Psp5II RGGWCCY 1 cut(s) 1145
Psp6I CCWGG 1 cut(s) 963
PspGI CCWGG 1 cut(s) 963
PspN4I GGNNCC 2 cut(s) 11, 2418
PspPI GGNCC 4 cut(s) 940, 1145, 1367, 1430
PspPPI RGGWCCY 1 cut(s) 1145
PsuI RGATCY 2 cut(s) 920, 2022
RsaI GTAC 2 cut(s) 1207, 1507
RsaNI GTAC 2 cut(s) 1206, 1506
RseI CAYNNNNRTG 1 cut(s) 1500
SacII CCGCGG 1 cut(s) 1297
SaqAI TTAA 9 cut(s) 138, 582, 662, 794, 998, 1787, 1862, 2189, 2573
SatI GCNGC 3 cut(s) 815, 1067, 1841
Sau3AI GATC 9 cut(s) 154, 271, 920, 1768, 1809, 1814, 2022, 2098, 2242
Sau96I GGNCC 4 cut(s) 940, 1145, 1367, 1430
SchI GAGTC 4 cut(s) 752, 782, 1357, 2372
ScrFI CCNGG 4 cut(s) 965, 1429, 2438, 2439
SduI GDGCHC 3 cut(s) 127, 851, 2438
SfaNI GCATC 5 cut(s) 114, 464, 1381, 1449, 2461
Sfr303I CCGCGG 1 cut(s) 1297
SgrBI CCGCGG 1 cut(s) 1297
SinI GGWCC 2 cut(s) 1145, 1367
SmaI CCCGGG 1 cut(s) 2439
SmiMI CAYNNNNRTG 1 cut(s) 1500
SmlI CTYRAG 3 cut(s) 793, 1540, 2372
SmoI CTYRAG 3 cut(s) 793, 1540, 2372
SsiI CCGC 6 cut(s) 226, 1067, 1294, 1296, 1487, 1877
SspI AATATT 1 cut(s) 1654
SspMI CTAG 6 cut(s) 62, 374, 749, 956, 1913, 2466
StyD4I CCNGG 4 cut(s) 963, 1427, 2436, 2437
StyI CCWWGG 3 cut(s) 397, 634, 1918
TaaI ACNGT 2 cut(s) 2035, 2454
TaqI TCGA 3 cut(s) 108, 573, 1734
TauI GCSGC 1 cut(s) 1069
TfiI GAWTC 9 cut(s) 403, 470, 575, 1096, 1212, 1220, 1480, 1492, 1545
Tru1I TTAA 9 cut(s) 138, 582, 662, 794, 998, 1787, 1862, 2189, 2573
Tru9I TTAA 9 cut(s) 138, 582, 662, 794, 998, 1787, 1862, 2189, 2573
TscAI CASTG 2 cut(s) 235, 2077
TseFI GTSAC 4 cut(s) 185, 744, 1192, 2035
TseI GCWGC 2 cut(s) 814, 1840
Tsp45I GTSAC 4 cut(s) 185, 744, 1192, 2035
TspGWI ACGGA 4 cut(s) 245, 933, 1067, 1590
TspMI CCCGGG 1 cut(s) 2437
TspRI CASTG 2 cut(s) 235, 2077
Vha464I CTTAAG 1 cut(s) 793
VpaK11BI GGWCC 2 cut(s) 1145, 1367
VspI ATTAAT 1 cut(s) 2573
XceI RCATGY 1 cut(s) 1534
XmaI CCCGGG 1 cut(s) 2437
XmnI GAANNNNTTC 2 cut(s) 392, 2347
XspI CTAG 6 cut(s) 62, 374, 749, 956, 1913, 2466
Zsp2I ATGCAT 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.