Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000048

Physical Location & Seq

Genomic Coordinates Reverse (-)

17374860 .. 17378044

Gene Structure 3185 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G014460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2937 bp

ATGATGGATATCTTCTGCGCAAACCTATTCAAGCCTCCCAGCTATCGCTTCCTCATCAACAATGTGGCTCACTACTTGCTCTTTCTTTTTCTGGCATCTTCATCTCTGCAGACTGCTAAACTGTGTTTGGGAGATGGACTTCCGAGCGTTGTGACATCATCATTGTGCATTGAGGAAGAGAGGCGAGCGCTTCTCAGCTTCAAAGGAGATGTTACTGATCTTTCTGGTAGGCTTTCTTCTTGGGTGGGTCAGGATTGCTGCCGATGGAGAGGGATTTCATGCAACAACCATACAGGTCATGTTGCAAAGATGGACCTCCGAAACCTGGAATACTTCGACGGGAACGTGGCTTTTGGGGGTAAGATTAATCCTTCTTTGCTTAGCTTTAAGAACTTATATTACCTTGACCTAAGTGGAAACGATTTTCAAGTTCCAATTCCCAACTTCTTCGGGAAGCTTCAAAGTTTGAGGTATCTCAATCTCTCAGACAATTCATTTTTGGGAGAGATTCCCCCATCTCTTGGTAACCTCTCAAACCTGAACTATCTTGACCTTAATTCGGGTTTTGATCTTTATTCTTCCAATTTGAGTTGGCTTTCCCGTCTGAACCTTAGCAGCACAGGAGTAAGTTGGCTACATGATGTCAACATGCTTCCTTCACTCTTAGAGTTGCATTTGTCTGATTGCCAAATTCAAAACCTTCCACACTCCCAGCTTCCATCAGTGAACTCCACATCCTTATTGGTTCTTGATCTTTCTGATAATTATATTAATTCTTCATTTCCCAGCTGGTTTTGTAATCTTACCAACCTCAAAAGACTTGATGCATCTCACAATTCTTTCTGGTCCTTTCCTGTTGAATTTGCAAACCTTAAGTCTTTGGAAGACCTTGGTTTGAGTGATAATTCTCTCGAAGGTCAAATTCCCAAAGTCATCGGTACTTGGTGCAGCCTAAGAATATTAGATCTTTCGCATAACTCGTTCAATGGTGGTTTGGAAGAGGTTTTTAATGGTTTTTCAAACTGTACGAGTCGTAGATTAGAGTCACTTGATTTGTCCACCAATGTGGTGGAAGGTGAACTGCCCGTCGCCTTAGGAATGCTTGAATATCTGAAGGAACTTGACCTCCGTGCAAACCGACTCTCTGGTCCAATTCCACAATCTATTGGTAATTTATCATCCTTGGAAACACTGAAAATCTCTGCTAATATGTTGGAAGGTGAACTGCCCGTGGCCTTAGGAATGCTTGAATATCTGAAGGAACTTGTCCTCAGTTCAAACCGATTTTCTGACATCTCTGTTAATCATATCGAGTCCATTCCTGAAAGTTTGGGACAACTCTCTCAGCTAGTTCACCTAGATCTATCTTCGAATTCGTGGGAAGGCATTCTAACTGAAGCCCATTTCCGAACTCCCACAAAATTGAAGTCATTGGCAGTCAGCACAGACCGACCTAGGTCCCTGAAATTTAACGTGGCTCATGAGTGGGTTCCTCCTTTCCAGCTTGATTCAGTCAACATTGTCAACTGCACAGTAGGTCCTGCCTTTGGGGTATGGCTTCAATCTCAAACTGAATTAACGGATCTCACGCTTAGTAATACTGGAATCTCAGATTTGATACCGGAGGAATGGTTCTTGAAGGTATCTTTCCAACTCACATCGCTGGTTTTATCTAACAACCAAATTCGTGGAAAGCTTTCATTTCACATGAACTCCTCCAACTCCTCCCCGCGTTTGCACTATATAGATTTGAGTCATAATCAATTTGAGGGCCCTCTGCCACATTGGTTTAGTGGTGCTGCCACCCATCTCTATCTTGGAAGCAATTTATTTTCCGGGCCAATTCCCTCAAATTATGGTCAATTGTTGCCTAACTTGAGAGAATTGGATCTATCTGACAATCATCTGAATGGTAGTATACCACCCTCTGTGTGGAACCTGTCAAGTTTGCAAACCCTTATGTTAAGAAGCAATCACTTGTCTGGAGAATTTCCTCCAGCATGGAGTCTGTGGCCAGATATACAGGTTGTAGATGTCTCAGACAACAATTTGTCTGGCAATTTCTCCAGTTCAATGGGTGTTCCGAGCTCACTATACCTATTGAATCTGAGCGAAAACAATTTCGAGGGCCAAATTCCTTCTTCTCTATTCCAAAACTGCAGCTTGTTGCTGAACCTTGCCCACAACAAATTTTCAGGGACCATTCCCAAGTGTTTGCATAATCTGGCTGCTTTGGCCTACAGTACTTACAATTATAAGCACGATTTTGGAAATTATCTTGAGACGGCCAGCTTGACATTGAAGGGACAAGAACTCGTATATAACATCACTCTGGATTTGGTGAAAAGCATTGATTTCTCATCAAACAACTTAGAAGGTGAAATCCCTGACGAAGTAAGCAGCCTCATTGCATTGGGCACGTTGAACTTGTCAAGAAATCAACTGACTGGAAACATTCCCTCAAAGATTGGAAACATGCAATTGCTGGAAACTCTTGATCTCTCACACAATCACCTCTCCGGGCATATTCCTCAGAGTTTATCTTCATTAACCTTTTTGGCTCACCTGAACTTGTCTTTCAACAACTTGTCCGGAAGAATTCCTTCAGGCAACCAACTTCAAACACTCAATGATTCATCCATTTACGAAGGCAATCCATCCTTGTGTGGGGTCCCTCTTTCAACTGTCTGCCCGGGAGATGGCGCAGCTGACCCTGACGATGGTGATCATAATGATGATGATAATGATGAGCATGGGAAGTTTGGTATCGTTGTTAGCGCTGTCCTAGGCTTCATCATAGGCTTTTGGAGTGTTTGTGGCACATTGGTTATGAAGAAATCATGGAGGTATGCCTATTTTCGATTCTTTGATAACATAAAGGAGAAGGCAGCATTAGCAATTGCATTAAGAGTGGCTCGTTGGCAAAGGAGGACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

978

Amino Acids

108.24

Weight (kDa)

5.23

Isoelectric Point (pI)

36.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	58 - 95	1.7e-11	Leucine rich repeat N-terminal domain
LRR_14	PF23598	122 - 187	5.2e-06	Leucine-rich repeat region
LRR_8	PF13855	131 - 186	9.6e-07	Leucine rich repeat
LRR_14	PF23598	209 - 352	3.9e-08	Leucine-rich repeat region
LRR_8	PF13855	219 - 280	3.7e-07	Leucine rich repeat
LRR_14	PF23598	318 - 531	9.3e-15	Leucine-rich repeat region
LRR_8	PF13855	370 - 429	1.9e-06	Leucine rich repeat
LRR_14	PF23598	795 - 881	6.8e-07	Leucine-rich repeat region
LRR_8	PF13855	805 - 863	7.1e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0000048)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G34930
fragaria_vesca	FvH4_3g12670 FvH4_3g12672 FvH4_3g12740 FvH4_3g12742 FvH4_3g12770 FvH4_3g12770 FvH4_3g12860 FvH4_3g12890 FvH4_3g13431 FvH4_3g13433 FvH4_3g13435 FvH4_3g13470 FvH4_3g13470 FvH4_3g13480 FvH4_3g13562 FvH4_3g13580 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13600 FvH4_3g13610 FvH4_3g13620 FvH4_3g13620 FvH4_3g23240 FvH4_3g32910 FvH4_3g35070 FvH4_3g45520 FvH4_5g08430 FvH4_5g08450 FvH4_6g53230 FvH4_6g53300
malus_domestica	MD05G1217600.v1.1 MD05G1217700.v1.1 MD05G1224700.v1.1 MD05G1225100.v1.1 MD05G1225300.v1.1 MD05G1225400.v1.1 MD05G1235900.v1.1 MD05G1236100.v1.1 MD05G1236300.v1.1 MD05G1237200.v1.1 MD05G1241600.v1.1 MD05G1245700.v1.1 MD05G1245800.v1.1 MD05G1245900.v1.1 MD05G1246000.v1.1 MD05G1246100.v1.1 MD05G1246300.v1.1 MD05G1246400.v1.1 MD05G1246500.v1.1 MD05G1248100.v1.1 MD05G1248200.v1.1 MD05G1264300.v1.1 MD05G1275900.v1.1 MD07G1051400.v1.1 MD09G1012600.v1.1 MD09G1012700.v1.1 MD09G1012800.v1.1 MD10G1221400.v1.1 MD10G1221500.v1.1 MD10G1221600.v1.1 MD10G1221900.v1.1 MD10G1222200.v1.1 MD10G1222400.v1.1 MD10G1222500.v1.1 MD10G1222900.v1.1 MD10G1223000.v1.1 MD10G1223100.v1.1 MD10G1223500.v1.1 MD10G1228000.v1.1 MD12G1019600.v1.1 MD12G1020000.v1.1 MD12G1020100.v1.1 MD17G1013200.v1.1 MD17G1013300.v1.1 MD17G1013400.v1.1
prunus_persica	Prupe.1G060500_v2.0.a1 Prupe.1G100100_v2.0.a1 Prupe.3G124000_v2.0.a1 Prupe.3G304400_v2.0.a1 Prupe.4G116800_v2.0.a1 Prupe.4G116900_v2.0.a1 Prupe.4G117000_v2.0.a1 Prupe.4G121800_v2.0.a1 Prupe.4G121900_v2.0.a1 Prupe.4G122000_v2.0.a1 Prupe.4G122100_v2.0.a1 Prupe.4G122200_v2.0.a1 Prupe.4G122300_v2.0.a1 Prupe.4G122500_v2.0.a1 Prupe.4G122600_v2.0.a1 Prupe.4G122800_v2.0.a1 Prupe.4G122900_v2.0.a1 Prupe.4G123000_v2.0.a1 Prupe.4G123100_v2.0.a1 Prupe.4G123200_v2.0.a1 Prupe.4G131500_v2.0.a1 Prupe.4G131600_v2.0.a1 Prupe.7G032500_v2.0.a1 Prupe.7G032900_v2.0.a1 Prupe.7G033000_v2.0.a1 Prupe.7G033100_v2.0.a1 Prupe.7G033300_v2.0.a1 Prupe.7G033600_v2.0.a1 Prupe.7G034600_v2.0.a1 Prupe.7G040200_v2.0.a1 Prupe.7G059200_v2.0.a1
pyrus_communis	pycom05g20580 pycom05g20590 pycom05g20760 pycom05g20800 pycom05g21280 pycom05g21290 pycom05g21820 pycom05g21830 pycom05g22180 pycom05g22190 pycom05g22210 pycom05g22450 pycom05g22460 pycom05g22470 pycom05g22480 pycom05g22490 pycom05g23770 pycom05g23780 pycom05g24050 pycom05g24060 pycom07g03910 pycom10g18700 pycom10g18720 pycom10g18730 pycom10g18740 pycom10g19150 pycom111g01060 pycom12g01660 pycom12g01690 pycom12g01720 pycom12g01740 pycom12g01750 pycom12g01770 pycom12g01810 pycom12g01820 pycom12g01830 pycom12g01840 pycom12g01870 pycom12g01900 pycom17g01060 pycom17g01070
rosa_chinensis	RchiOBHm_Chr1g0315041 RchiOBHm_Chr1g0315051 RchiOBHm_Chr1g0315071 RchiOBHm_Chr1g0315161 RchiOBHm_Chr1g0315211 RchiOBHm_Chr1g0315251 RchiOBHm_Chr1g0315321 RchiOBHm_Chr1g0315391 RchiOBHm_Chr1g0315451 RchiOBHm_Chr1g0315481 RchiOBHm_Chr1g0315551 RchiOBHm_Chr1g0315601 RchiOBHm_Chr1g0315621 RchiOBHm_Chr1g0359221 RchiOBHm_Chr2g0142981 RchiOBHm_Chr2g0143001 RchiOBHm_Chr2g0143061 RchiOBHm_Chr2g0143091 RchiOBHm_Chr2g0175321 RchiOBHm_Chr2g0175341 RchiOBHm_Chr2g0175361 RchiOBHm_Chr2g0175371 RchiOBHm_Chr3g0470491 RchiOBHm_Chr3g0480881 RchiOBHm_Chr3g0485511 RchiOBHm_Chr5g0020741 RchiOBHm_Chr5g0020901 RchiOBHm_Chr5g0020931 RchiOBHm_Chr5g0020941 RchiOBHm_Chr5g0020961 RchiOBHm_Chr5g0020971 RchiOBHm_Chr5g0021451 RchiOBHm_Chr5g0021531 RchiOBHm_Chr5g0021831 RchiOBHm_Chr5g0021841 RchiOBHm_Chr5g0021931 RchiOBHm_Chr5g0021941 RchiOBHm_Chr5g0021981 RchiOBHm_Chr5g0021991 RchiOBHm_Chr5g0022011 RchiOBHm_Chr5g0022181 RchiOBHm_Chr5g0022191 RchiOBHm_Chr5g0022211 RchiOBHm_Chr5g0022221 RchiOBHm_Chr5g0022231 RchiOBHm_Chr5g0022291 RchiOBHm_Chr5g0022301 RchiOBHm_Chr5g0022331 RchiOBHm_Chr5g0022361 RchiOBHm_Chr5g0022371 RchiOBHm_Chr5g0022381 RchiOBHm_Chr5g0022401 RchiOBHm_Chr5g0022431 RchiOBHm_Chr5g0022451 RchiOBHm_Chr5g0022541 RchiOBHm_Chr5g0022591 RchiOBHm_Chr5g0022601 RchiOBHm_Chr5g0022701 RchiOBHm_Chr5g0022741 RchiOBHm_Chr5g0022791 RchiOBHm_Chr5g0022811 RchiOBHm_Chr5g0022851 RchiOBHm_Chr5g0029441 RchiOBHm_Chr5g0041631 RchiOBHm_Chr5g0069391 RchiOBHm_Chr6g0273811 RchiOBHm_Chr6g0273831 RchiOBHm_Chr6g0275331 RchiOBHm_Chr7g0219061
rosa_laevigata	RLG00000002463 RLG00000020007 RLG00000020008 RLG00000022320 RLG00000022321 RLG00000023446 RLG00000030742 RLG00000030743 RLG00000030747 RLG00000032557 RLG00000032564 RLG00000032571 RLG00000032573 RLG00000032574 RLG00000032612 RLG00000032633 RLG00000032636 RLG00000032638 RLG00000032650 RLG00000032651 RLG00000032652 RLG00000032653 RLG00000032655 RLG00000032673 RLG00000032678 RLG00000032769 RLG00000032857 RLG00000033168 RLG00000033465 RLG00000034086 RLG00000034222 RLG00000035290
rosa_multiflora	Rmu_co8143358.1_g000001 Rmu_co8518791.1_g000001 Rmu_sc0000178.1_g000008 Rmu_sc0000178.1_g000014 Rmu_sc0000401.1_g000005 Rmu_sc0000401.1_g000013 Rmu_sc0000401.1_g000017 Rmu_sc0000401.1_g000018 Rmu_sc0000401.1_g000024 Rmu_sc0000401.1_g000025 Rmu_sc0000576.1_g000020 Rmu_sc0001585.1_g000003 Rmu_sc0001585.1_g000005 Rmu_sc0001585.1_g000008 Rmu_sc0001784.1_g000006 Rmu_sc0001784.1_g000011 Rmu_sc0001784.1_g000022 Rmu_sc0001784.1_g000028 Rmu_sc0002052.1_g000004 Rmu_sc0002052.1_g000011 Rmu_sc0002277.1_g000003 Rmu_sc0002277.1_g000006 Rmu_sc0002277.1_g000024 Rmu_sc0002658.1_g000012 Rmu_sc0003512.1_g000004 Rmu_sc0003512.1_g000007 Rmu_sc0004180.1_g000016 Rmu_sc0004180.1_g000029 Rmu_sc0004180.1_g000034 Rmu_sc0005639.1_g000008 Rmu_sc0005639.1_g000023 Rmu_sc0006070.1_g000016 Rmu_sc0006070.1_g000017 Rmu_sc0006966.1_g000021 Rmu_sc0006966.1_g000023 Rmu_sc0007239.1_g000003 Rmu_sc0008460.1_g000010 Rmu_sc0009984.1_g000008 Rmu_sc0010181.1_g000005 Rmu_sc0010181.1_g000010 Rmu_sc0010503.1_g000006 Rmu_sc0011646.1_g000003 Rmu_sc0012984.1_g000011 Rmu_sc0016972.1_g000005 Rmu_sc0016972.1_g000008 Rmu_sc0023070.1_g000003 Rmu_sc0025660.1_g000001 Rmu_ssc0000322.1_g000019
rosa_roxburghii	Rroxscaffold_1G00038860 Rroxscaffold_1G00053490 Rroxscaffold_1G00053500 Rroxscaffold_1G00054230 Rroxscaffold_1G00056460 Rroxscaffold_1G00056470 Rroxscaffold_1G00056480 Rroxscaffold_1G00056500 Rroxscaffold_1G00056510 Rroxscaffold_1G00056620 Rroxscaffold_1G00056690 Rroxscaffold_1G00056710 Rroxscaffold_1G00056720 Rroxscaffold_1G00056730 Rroxscaffold_1G00056740 Rroxscaffold_1G00056750 Rroxscaffold_1G00056760 Rroxscaffold_1G00056870 Rroxscaffold_1G00056900 Rroxscaffold_1G00057120 Rroxscaffold_1G00057560 Rroxscaffold_2G00077430 Rroxscaffold_2G00102160 Rroxscaffold_3G00231420 Rroxscaffold_3G00231430 Rroxscaffold_4G00297230 Rroxscaffold_4G00331570 Rroxscaffold_6G00396700 Rroxscaffold_6G00400940 Rroxscaffold_7G00192740
rosa_rugosa	Rorug01G0004400 Rorug01G0004500 Rorug02G0377600 Rorug02G0378000 Rorug02G0582800 Rorug02G0583400 Rorug03G0187000 Rorug03G0218800 Rorug04G0081200 Rorug05G0062700 Rorug05G0062700 Rorug05G0063100 Rorug05G0063200 Rorug05G0063200 Rorug05G0063200 Rorug05G0067000 Rorug05G0069700 Rorug05G0069900 Rorug05G0070000 Rorug05G0070100 Rorug05G0070300 Rorug05G0070400 Rorug05G0070600 Rorug05G0070600 Rorug05G0072300 Rorug05G0072400 Rorug05G0072500 Rorug05G0072500 Rorug05G0072600.1 Rorug05G0072700 Rorug05G0072800 Rorug05G0072800 Rorug05G0072900 Rorug05G0073000 Rorug05G0073000 Rorug05G0073400 Rorug05G0073400 Rorug05G0073400 Rorug05G0074800 Rorug05G0075000 Rorug05G0114300 Rorug05G0194200 Rorug06G0097800
rosa_samantha	Rh2AG401400 Rh2CG387600 Rh2CG417000 Rh2CG637400 Rh5CG169600 Rh5CG172100 Rh5CG175200 Rh5CG317100 Rh6DG187900
rosa_wichuraiana	Rw1G000750 Rw1G000790 Rw1G000820 Rw1G000860 Rw1G000880 Rw1G000910 Rw2G035180 Rw2G035200 Rw2G035240 Rw2G054370 Rw2G054380 Rw5G013570 Rw5G013580 Rw5G013590 Rw5G013910 Rw5G013980 Rw5G014110 Rw5G014120 Rw5G014280 Rw5G014310 Rw5G014400 Rw5G014420 Rw5G014440 Rw5G014460 Rw5G014480 Rw5G014500 Rw5G014520 Rw5G014530 Rw5G042390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2256
AasI	GACNNNNNNGTC	1 cut(s)	1146
Acc16I	TGCGCA	1 cut(s)	19
AccB7I	CCANNNNNTGG	1 cut(s)	521
AccI	GTMKAC	1 cut(s)	1918
AccII	CGCG	1 cut(s)	1732
AccIII	TCCGGA	1 cut(s)	2591
AciI	CCGC	1 cut(s)	1730
AclWI	GGATC	2 cut(s)	1590, 1896
AcoI	YGGCCR	2 cut(s)	2012, 2286
AcuI	CTGAAG	4 cut(s)	1133, 1277, 1416, 2589
AfaI	GTAC	3 cut(s)	940, 1027, 2245
AfeI	AGCGCT	2 cut(s)	189, 2779
AfiI	CCNNNNNNNGG	8 cut(s)	325, 521, 559, 1547, 1932, 2667, 2699, 2720
AflII	CTTAAG	1 cut(s)	872
AjiI	CACGTC	1 cut(s)	2934
AjnI	CCWGG	1 cut(s)	324
AleI	CACNNNNGTG	1 cut(s)	1064
AloI	GAACNNNNNNTCC	6 cut(s)	719, 751, 1110, 1142, 1616, 1648
Alw21I	GWGCWC	1 cut(s)	2090
Alw26I	GTCTC	2 cut(s)	2041, 2276
AlwI	GGATC	2 cut(s)	1590, 1896
Ama87I	CYCGRG	1 cut(s)	2692
Aor13HI	TCCGGA	1 cut(s)	2591
Aor51HI	AGCGCT	2 cut(s)	189, 2779
AoxI	GGCC	7 cut(s)	1233, 1771, 1838, 2012, 2128, 2235, 2286
ApaI	GGGCCC	1 cut(s)	1775
ApeKI	GCWGC	9 cut(s)	258, 615, 948, 1799, 2160, 2228, 2400, 2705, 2888
ArsI	GACNNNNNNTTYG	4 cut(s)	860, 892, 1412, 1444
AseI	ATTAAT	2 cut(s)	366, 771
Asp700I	GAANNNNTTC	3 cut(s)	1386, 1696, 2602
AspA2I	CCTAGG	2 cut(s)	1454, 2785
AspLEI	GCGC	4 cut(s)	20, 190, 2705, 2780
AsuC2I	CCSGG	4 cut(s)	1837, 2521, 2693, 2694
AsuHPI	GGTGA	8 cut(s)	1088, 1232, 1346, 2353, 2390, 2504, 2555, 2735
AsuII	TTCGAA	1 cut(s)	1370
AvaI	CYCGRG	1 cut(s)	2692
AvaII	GGWCC	7 cut(s)	313, 846, 1148, 1458, 1538, 2199, 2671
AvrII	CCTAGG	2 cut(s)	1454, 2785
AxyI	CCTNAGG	2 cut(s)	1093, 1237
BaeGI	GKGCMC	2 cut(s)	1775, 2420
BalI	TGGCCA	1 cut(s)	2014
BanII	GRGCYC	2 cut(s)	1775, 2090
BarI	GAAGNNNNNNTAC	2 cut(s)	220, 252
BbsI	GAAGAC	1 cut(s)	891
Bbv12I	GWGCWC	1 cut(s)	2090
BbvI	GCAGC	9 cut(s)	245, 627, 960, 1786, 2172, 2215, 2412, 2717, 2900
BccI	CCATC	9 cut(s)	128, 258, 304, 523, 727, 1815, 2665, 2693, 2714
BceAI	ACGGC	1 cut(s)	2301
BciT130I	CCWGG	1 cut(s)	326
BclI	TGATCA	1 cut(s)	2725
BcnI	CCSGG	4 cut(s)	1837, 2521, 2693, 2694
BcoDI	GTCTC	2 cut(s)	2041, 2276
BfaI	CTAG	4 cut(s)	1349, 1358, 1455, 2786
BfmI	CTRYAG	3 cut(s)	107, 2158, 2239
BfoI	RGCGCY	2 cut(s)	191, 2781
BfrI	CTTAAG	1 cut(s)	872
BglII	AGATCT	2 cut(s)	964, 1360
BisI	GCNGC	9 cut(s)	259, 616, 949, 1800, 2161, 2229, 2401, 2706, 2889
BlnI	CCTAGG	2 cut(s)	1454, 2785
BlpI	GCTNAGC	1 cut(s)	380
BlsI	GCNGC	9 cut(s)	260, 617, 950, 1801, 2162, 2230, 2402, 2707, 2890
BmcAI	AGTACT	1 cut(s)	2245
Bme1390I	CCNGG	5 cut(s)	326, 1837, 2521, 2693, 2694
Bme18I	GGWCC	7 cut(s)	313, 846, 1148, 1458, 1538, 2199, 2671
BmeT110I	CYCGRG	1 cut(s)	2692
BmgBI	CACGTC	1 cut(s)	2934
BmiI	GGNNCC	7 cut(s)	1460, 1491, 1773, 1937, 2200, 2672, 2673
BmrFI	CCNGG	5 cut(s)	326, 1837, 2521, 2693, 2694
BmsI	GCATC	3 cut(s)	104, 814, 836
BoxI	GACNNNNGTC	1 cut(s)	1456
BpiI	GAAGAC	1 cut(s)	891
BplI	GAGNNNNNCTC	2 cut(s)	177, 209
BpmI	CTGGAG	3 cut(s)	1980, 2004, 2050
Bpu10I	CCTNAGC	1 cut(s)	611
Bpu1102I	GCTNAGC	1 cut(s)	380
Bpu14I	TTCGAA	1 cut(s)	1370
BpuEI	CTTGAG	2 cut(s)	1897, 2300
BpuMI	CCSGG	4 cut(s)	1837, 2521, 2693, 2694
BsaBI	GATNNNNATC	2 cut(s)	8, 2724
BsaJI	CCNNGG	6 cut(s)	889, 1182, 1230, 1454, 2692, 2785
BsaWI	WCCGGW	2 cut(s)	1621, 2591
BsaXI	ACNNNNNCTCC	8 cut(s)	1110, 1140, 1616, 1646, 1697, 1727, 2800, 2830
Bsc4I	CCNNNNNNNGG	8 cut(s)	325, 521, 559, 1547, 1932, 2667, 2699, 2720
Bse1I	ACTGG	3 cut(s)	1606, 2067, 2452
Bse21I	CCTNAGG	2 cut(s)	1093, 1237
Bse3DI	GCAATG	1 cut(s)	2406
Bse8I	GATNNNNATC	2 cut(s)	8, 2724
BseAI	TCCGGA	1 cut(s)	2591
BseBI	CCWGG	1 cut(s)	326
BseDI	CCNNGG	6 cut(s)	889, 1182, 1230, 1454, 2692, 2785
BseGI	GGATG	4 cut(s)	734, 1178, 2636, 2657
BseJI	GATNNNNATC	2 cut(s)	8, 2724
BseLI	CCNNNNNNNGG	8 cut(s)	325, 521, 559, 1547, 1932, 2667, 2699, 2720
BseMI	GCAATG	1 cut(s)	2406
BseMII	CTCAG	8 cut(s)	208, 498, 1285, 1358, 1623, 2052, 2099, 2546
BseNI	ACTGG	3 cut(s)	1606, 2067, 2452
BseRI	GAGGAG	2 cut(s)	1705, 1714
BseSI	GKGCMC	2 cut(s)	1775, 2420
BseXI	GCAGC	9 cut(s)	245, 627, 960, 1786, 2172, 2215, 2412, 2717, 2900
BseYI	CCCAGC	3 cut(s)	38, 711, 785
BsgI	GTGCAG	2 cut(s)	967, 1513
Bsh1236I	CGCG	1 cut(s)	1732
BshFI	GGCC	7 cut(s)	1235, 1773, 1840, 2014, 2130, 2237, 2288
BsiHKAI	GWGCWC	1 cut(s)	2090
BsiHKCI	CYCGRG	1 cut(s)	2692
BsiSI	CCGG	5 cut(s)	1622, 1836, 2520, 2592, 2693
BslFI	GGGAC	5 cut(s)	1347, 1444, 2212, 2319, 2657
BslI	CCNNNNNNNGG	8 cut(s)	325, 521, 559, 1547, 1932, 2667, 2699, 2720
BsmAI	GTCTC	2 cut(s)	2041, 2276
BsmBI	CGTCTC	1 cut(s)	2276
BsmFI	GGGAC	5 cut(s)	1347, 1444, 2212, 2319, 2657
BsmI	GAATGC	3 cut(s)	1104, 1248, 1386
BsnI	GGCC	7 cut(s)	1235, 1773, 1840, 2014, 2130, 2237, 2288
BsoBI	CYCGRG	1 cut(s)	2692
Bsp119I	TTCGAA	1 cut(s)	1370
Bsp120I	GGGCCC	1 cut(s)	1771
Bsp1286I	GDGCHC	3 cut(s)	1775, 2090, 2420
Bsp13I	TCCGGA	1 cut(s)	2591
Bsp143I	GATC	9 cut(s)	217, 568, 751, 964, 1360, 1582, 1888, 2497, 2725
Bsp1720I	GCTNAGC	1 cut(s)	380
BspACI	CCGC	1 cut(s)	1730
BspANI	GGCC	7 cut(s)	1235, 1773, 1840, 2014, 2130, 2237, 2288
BspCNI	CTCAG	8 cut(s)	207, 497, 1284, 1357, 1622, 2051, 2100, 2545
BspEI	TCCGGA	1 cut(s)	2591
BspFNI	CGCG	1 cut(s)	1732
BspHI	TCATGA	1 cut(s)	1480
BspLI	GGNNCC	7 cut(s)	1460, 1491, 1773, 1937, 2200, 2672, 2673
BspMAI	CTGCAG	2 cut(s)	111, 2162
BspPI	GGATC	2 cut(s)	1590, 1896
BspT104I	TTCGAA	1 cut(s)	1370
BspTI	CTTAAG	1 cut(s)	872
BsrDI	GCAATG	1 cut(s)	2406
BsrI	ACTGG	3 cut(s)	1606, 2067, 2452
BssECI	CCNNGG	6 cut(s)	889, 1182, 1230, 1454, 2692, 2785
BssMI	GATC	9 cut(s)	217, 568, 751, 964, 1360, 1582, 1888, 2497, 2725
BssNAI	GTATAC	1 cut(s)	1919
BssT1I	CCWWGG	4 cut(s)	889, 1182, 1454, 2785
Bst1107I	GTATAC	1 cut(s)	1919
Bst2UI	CCWGG	1 cut(s)	326
Bst4CI	ACNGT	5 cut(s)	123, 1025, 1534, 2243, 2686
Bst6I	CTCTTC	2 cut(s)	171, 993
BstAFI	CTTAAG	1 cut(s)	872
BstBI	TTCGAA	1 cut(s)	1370
BstC8I	GCNNGC	2 cut(s)	186, 2290
BstDSI	CCRYGG	1 cut(s)	1230
BstEII	GGTNACC	1 cut(s)	524
BstF5I	GGATG	4 cut(s)	734, 1178, 2636, 2657
BstFNI	CGCG	1 cut(s)	1732
BstH2I	RGCGCY	2 cut(s)	191, 2781
BstHHI	GCGC	4 cut(s)	20, 190, 2705, 2780
BstKTI	GATC	9 cut(s)	220, 571, 754, 967, 1363, 1585, 1891, 2500, 2728
BstMAI	GTCTC	2 cut(s)	2041, 2276
BstMBI	GATC	9 cut(s)	217, 568, 751, 964, 1360, 1582, 1888, 2497, 2725
BstMWI	GCNNNNNNNGC	2 cut(s)	2234, 2894
BstNI	CCWGG	1 cut(s)	326
BstNSI	RCATGY	2 cut(s)	652, 2479
BstPAI	GACNNNNGTC	1 cut(s)	1456
BstPI	GGTNACC	1 cut(s)	524
BstSCI	CCNGG	5 cut(s)	324, 1835, 2519, 2691, 2692
BstSFI	CTRYAG	3 cut(s)	107, 2158, 2239
BstSLI	GKGCMC	2 cut(s)	1775, 2420
BstUI	CGCG	1 cut(s)	1732
BstV1I	GCAGC	9 cut(s)	245, 627, 960, 1786, 2172, 2215, 2412, 2717, 2900
BstV2I	GAAGAC	1 cut(s)	891
BstX2I	RGATCY	4 cut(s)	964, 1360, 1582, 1888
BstXI	CCANNNNNNTGG	4 cut(s)	1066, 1069, 1688, 2074
BstYI	RGATCY	4 cut(s)	964, 1360, 1582, 1888
BstZ17I	GTATAC	1 cut(s)	1919
Bsu36I	CCTNAGG	2 cut(s)	1093, 1237
BsuRI	GGCC	7 cut(s)	1235, 1773, 1840, 2014, 2130, 2237, 2288
BtgI	CCRYGG	1 cut(s)	1230
BtgZI	GCGATG	1 cut(s)	1644
BtrI	CACGTC	1 cut(s)	2934
BtsCI	GGATG	4 cut(s)	734, 1178, 2636, 2657
BtsIMutI	CAGTG	2 cut(s)	729, 1190
Cac8I	GCNNGC	2 cut(s)	186, 2290
CciI	TCATGA	1 cut(s)	1480
CfoI	GCGC	4 cut(s)	20, 190, 2705, 2780
Cfr9I	CCCGGG	1 cut(s)	2692
Csp6I	GTAC	3 cut(s)	939, 1026, 2244
CviQI	GTAC	3 cut(s)	939, 1026, 2244
DpnI	GATC	9 cut(s)	219, 570, 753, 966, 1362, 1584, 1890, 2499, 2727
DpnII	GATC	9 cut(s)	217, 568, 751, 964, 1360, 1582, 1888, 2497, 2725
DrdI	GACNNNNNNGTC	1 cut(s)	1146
DseDI	GACNNNNNNGTC	1 cut(s)	1146
EaeI	YGGCCR	2 cut(s)	2012, 2286
Eam1104I	CTCTTC	2 cut(s)	171, 993
EarI	CTCTTC	2 cut(s)	171, 993
Ecl136II	GAGCTC	1 cut(s)	2088
Eco130I	CCWWGG	4 cut(s)	889, 1182, 1454, 2785
Eco24I	GRGCYC	2 cut(s)	1775, 2090
Eco32I	GATATC	1 cut(s)	10
Eco47I	GGWCC	7 cut(s)	313, 846, 1148, 1458, 1538, 2199, 2671
Eco47III	AGCGCT	2 cut(s)	189, 2779
Eco53kI	GAGCTC	1 cut(s)	2088
Eco57I	CTGAAG	4 cut(s)	1133, 1277, 1416, 2589
Eco81I	CCTNAGG	2 cut(s)	1093, 1237
Eco88I	CYCGRG	1 cut(s)	2692
Eco91I	GGTNACC	1 cut(s)	524
EcoICRI	GAGCTC	1 cut(s)	2088
EcoO109I	RGGNCCY	5 cut(s)	1458, 1538, 1771, 1772, 2671
EcoO65I	GGTNACC	1 cut(s)	524
EcoRI	GAATTC	2 cut(s)	1372, 2598
EcoRII	CCWGG	1 cut(s)	324
EcoRV	GATATC	1 cut(s)	10
EcoT14I	CCWWGG	4 cut(s)	889, 1182, 1454, 2785
EcoT22I	ATGCAT	1 cut(s)	829
EcoT38I	GRGCYC	2 cut(s)	1775, 2090
ErhI	CCWWGG	4 cut(s)	889, 1182, 1454, 2785
Esp3I	CGTCTC	1 cut(s)	2276
FalI	AAGNNNNNCTT	2 cut(s)	2587, 2619
FaqI	GGGAC	5 cut(s)	1347, 1444, 2212, 2319, 2657
FauI	CCCGC	1 cut(s)	1737
FbaI	TGATCA	1 cut(s)	2725
FblI	GTMKAC	1 cut(s)	1918
Fnu4HI	GCNGC	9 cut(s)	259, 616, 949, 1800, 2161, 2229, 2401, 2706, 2889
FokI	GGATG	4 cut(s)	721, 1165, 2623, 2644
FriOI	GRGCYC	2 cut(s)	1775, 2090
Fsp4HI	GCNGC	9 cut(s)	259, 616, 949, 1800, 2161, 2229, 2401, 2706, 2889
FspBI	CTAG	4 cut(s)	1349, 1358, 1455, 2786
FspI	TGCGCA	1 cut(s)	19
GlaI	GCGC	4 cut(s)	19, 189, 2704, 2779
GluI	GCNGC	9 cut(s)	259, 616, 949, 1800, 2161, 2229, 2401, 2706, 2889
GsaI	CCCAGC	3 cut(s)	42, 715, 789
GsuI	CTGGAG	3 cut(s)	1980, 2004, 2050
HaeII	RGCGCY	2 cut(s)	191, 2781
HaeIII	GGCC	7 cut(s)	1235, 1773, 1840, 2014, 2130, 2237, 2288
HapII	CCGG	5 cut(s)	1622, 1836, 2520, 2592, 2693
HhaI	GCGC	4 cut(s)	20, 190, 2705, 2780
Hin6I	GCGC	4 cut(s)	18, 188, 2703, 2778
HinP1I	GCGC	4 cut(s)	18, 188, 2703, 2778
HincII	GTYRAC	3 cut(s)	646, 1516, 1525
HindII	GTYRAC	3 cut(s)	646, 1516, 1525
HindIII	AAGCTT	2 cut(s)	455, 1694
HpaII	CCGG	5 cut(s)	1622, 1836, 2520, 2592, 2693
HphI	GGTGA	8 cut(s)	1088, 1232, 1346, 2353, 2390, 2504, 2555, 2735
Hpy166II	GTNNAC	9 cut(s)	646, 727, 1059, 1079, 1223, 1354, 1516, 1525, 1919
Hpy8I	GTNNAC	9 cut(s)	646, 727, 1059, 1079, 1223, 1354, 1516, 1525, 1919
Hpy99I	CGWCG	2 cut(s)	341, 1091
HpyCH4III	ACNGT	5 cut(s)	123, 1025, 1534, 2243, 2686
HpyCH4IV	ACGT	4 cut(s)	345, 1473, 2420, 2933
HpyF10VI	GCNNNNNNNGC	2 cut(s)	2234, 2894
HpySE526I	ACGT	4 cut(s)	345, 1473, 2420, 2933
HspAI	GCGC	4 cut(s)	18, 188, 2703, 2778
KflI	GGGWCCC	1 cut(s)	2671
Kpn2I	TCCGGA	1 cut(s)	2591
Ksp22I	TGATCA	1 cut(s)	2725
Kzo9I	GATC	9 cut(s)	217, 568, 751, 964, 1360, 1582, 1888, 2497, 2725
Lsp1109I	GCAGC	9 cut(s)	245, 627, 960, 1786, 2172, 2215, 2412, 2717, 2900
LweI	GCATC	3 cut(s)	104, 814, 836
MaeI	CTAG	4 cut(s)	1349, 1358, 1455, 2786
MaeII	ACGT	4 cut(s)	345, 1473, 2420, 2933
MaeIII	GTNAC	4 cut(s)	151, 211, 524, 1044
MalI	GATC	9 cut(s)	219, 570, 753, 966, 1362, 1584, 1890, 2499, 2727
MboI	GATC	9 cut(s)	217, 568, 751, 964, 1360, 1582, 1888, 2497, 2725
MfeI	CAATTG	3 cut(s)	1862, 2480, 2898
MflI	RGATCY	4 cut(s)	964, 1360, 1582, 1888
MhlI	GDGCHC	3 cut(s)	1775, 2090, 2420
MlsI	TGGCCA	1 cut(s)	2014
MluNI	TGGCCA	1 cut(s)	2014
MlyI	GAGTC	6 cut(s)	1039, 1052, 1134, 1322, 1762, 2014
MmeI	TCCRAC	3 cut(s)	1194, 1675, 1743
Mox20I	TGGCCA	1 cut(s)	2014
Mph1103I	ATGCAT	1 cut(s)	829
MroI	TCCGGA	1 cut(s)	2591
MroXI	GAANNNNTTC	3 cut(s)	1386, 1696, 2602
MscI	TGGCCA	1 cut(s)	2014
MslI	CAYNNNNRTG	5 cut(s)	163, 1064, 1908, 2662, 2733
Msp20I	TGGCCA	1 cut(s)	2014
MspA1I	CMGCKG	2 cut(s)	789, 2708
MspCI	CTTAAG	1 cut(s)	872
MspI	CCGG	5 cut(s)	1622, 1836, 2520, 2592, 2693
MspR9I	CCNGG	5 cut(s)	326, 1837, 2521, 2693, 2694
MunI	CAATTG	3 cut(s)	1862, 2480, 2898
Mva1269I	GAATGC	3 cut(s)	1104, 1248, 1386
MvaI	CCWGG	1 cut(s)	326
MvnI	CGCG	1 cut(s)	1732
MwoI	GCNNNNNNNGC	2 cut(s)	2234, 2894
NciI	CCSGG	4 cut(s)	1837, 2521, 2693, 2694
NdeII	GATC	9 cut(s)	217, 568, 751, 964, 1360, 1582, 1888, 2497, 2725
NlaIV	GGNNCC	7 cut(s)	1460, 1491, 1773, 1937, 2200, 2672, 2673
NmuCI	GTSAC	2 cut(s)	151, 1044
NsbI	TGCGCA	1 cut(s)	19
NsiI	ATGCAT	1 cut(s)	829
NspI	RCATGY	2 cut(s)	652, 2479
NspV	TTCGAA	1 cut(s)	1370
OliI	CACNNNNGTG	1 cut(s)	1064
PagI	TCATGA	1 cut(s)	1480
PcsI	WCGNNNNNNNCGW	2 cut(s)	342, 977
PctI	GAATGC	3 cut(s)	1104, 1248, 1386
PdmI	GAANNNNTTC	3 cut(s)	1386, 1696, 2602
PfeI	GAWTC	6 cut(s)	508, 1508, 1605, 2104, 2633, 2862
PflMI	CCANNNNNTGG	1 cut(s)	521
PkrI	GCNGC	9 cut(s)	260, 617, 950, 1801, 2162, 2230, 2402, 2707, 2890
PleI	GAGTC	6 cut(s)	1038, 1051, 1134, 1321, 1761, 2013
PpsI	GAGTC	6 cut(s)	1038, 1051, 1134, 1321, 1761, 2013
PpuMI	RGGWCCY	3 cut(s)	1458, 1538, 2671
PshAI	GACNNNNGTC	1 cut(s)	1456
PshBI	ATTAAT	2 cut(s)	366, 771
PsiI	TTATAA	1 cut(s)	2256
Psp124BI	GAGCTC	1 cut(s)	2090
Psp5II	RGGWCCY	3 cut(s)	1458, 1538, 2671
Psp6I	CCWGG	1 cut(s)	324
PspEI	GGTNACC	1 cut(s)	524
PspFI	CCCAGC	3 cut(s)	38, 711, 785
PspGI	CCWGG	1 cut(s)	324
PspN4I	GGNNCC	7 cut(s)	1460, 1491, 1773, 1937, 2200, 2672, 2673
PspOMI	GGGCCC	1 cut(s)	1771
PspPPI	RGGWCCY	3 cut(s)	1458, 1538, 2671
PsrI	GAACNNNNNNTAC	2 cut(s)	383, 415
PstI	CTGCAG	2 cut(s)	111, 2162
PsuI	RGATCY	4 cut(s)	964, 1360, 1582, 1888
PvuII	CAGCTG	2 cut(s)	789, 2708
RsaI	GTAC	3 cut(s)	940, 1027, 2245
RsaNI	GTAC	3 cut(s)	939, 1026, 2244
RseI	CAYNNNNRTG	5 cut(s)	163, 1064, 1908, 2662, 2733
SacI	GAGCTC	1 cut(s)	2090
SatI	GCNGC	9 cut(s)	259, 616, 949, 1800, 2161, 2229, 2401, 2706, 2889
Sau3AI	GATC	9 cut(s)	217, 568, 751, 964, 1360, 1582, 1888, 2497, 2725
ScaI	AGTACT	1 cut(s)	2245
SchI	GAGTC	6 cut(s)	1039, 1052, 1134, 1322, 1762, 2014
ScrFI	CCNGG	5 cut(s)	326, 1837, 2521, 2693, 2694
SduI	GDGCHC	3 cut(s)	1775, 2090, 2420
SfaNI	GCATC	3 cut(s)	104, 814, 836
SfcI	CTRYAG	3 cut(s)	107, 2158, 2239
SfuI	TTCGAA	1 cut(s)	1370
SinI	GGWCC	7 cut(s)	313, 846, 1148, 1458, 1538, 2199, 2671
SmaI	CCCGGG	1 cut(s)	2694
SmiMI	CAYNNNNRTG	5 cut(s)	163, 1064, 1908, 2662, 2733
SmlI	CTYRAG	3 cut(s)	872, 1876, 2279
SmoI	CTYRAG	3 cut(s)	872, 1876, 2279
SsiI	CCGC	1 cut(s)	1730
SspI	AATATT	1 cut(s)	960
SspMI	CTAG	4 cut(s)	1349, 1358, 1455, 2786
SstI	GAGCTC	1 cut(s)	2090
StyD4I	CCNGG	5 cut(s)	324, 1835, 2519, 2691, 2692
StyI	CCWWGG	4 cut(s)	889, 1182, 1454, 2785
TaaI	ACNGT	5 cut(s)	123, 1025, 1534, 2243, 2686
TaiI	ACGT	4 cut(s)	348, 1476, 2423, 2936
TaqI	TCGA	6 cut(s)	336, 912, 1311, 1370, 2124, 2860
TaqII	GACCGA	1 cut(s)	1464
TatI	WGTACW	1 cut(s)	2243
TfiI	GAWTC	6 cut(s)	508, 1508, 1605, 2104, 2633, 2862
TscAI	CASTG	2 cut(s)	729, 1197
TseFI	GTSAC	2 cut(s)	151, 1044
TseI	GCWGC	9 cut(s)	258, 615, 948, 1799, 2160, 2228, 2400, 2705, 2888
Tsp45I	GTSAC	2 cut(s)	151, 1044
TspGWI	ACGGA	2 cut(s)	1118, 1595
TspMI	CCCGGG	1 cut(s)	2692
TspRI	CASTG	2 cut(s)	729, 1197
Van91I	CCANNNNNTGG	1 cut(s)	521
Vha464I	CTTAAG	1 cut(s)	872
VpaK11BI	GGWCC	7 cut(s)	313, 846, 1148, 1458, 1538, 2199, 2671
VspI	ATTAAT	2 cut(s)	366, 771
XceI	RCATGY	2 cut(s)	652, 2479
XcmI	CCANNNNNNNNNTGG	4 cut(s)	739, 1066, 1814, 1929
XmaI	CCCGGG	1 cut(s)	2692
XmaJI	CCTAGG	2 cut(s)	1454, 2785
XmiI	GTMKAC	1 cut(s)	1918
XmnI	GAANNNNTTC	3 cut(s)	1386, 1696, 2602
XspI	CTAG	4 cut(s)	1349, 1358, 1455, 2786
ZrmI	AGTACT	1 cut(s)	2245
Zsp2I	ATGCAT	1 cut(s)	829

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.